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Conserved domains on  [gi|2734514880|ref|WP_346659993|]
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DUF6651 domain-containing protein, partial [Escherichia coli]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6651 super family cl48515
Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. ...
 25-137 1.16e-62

Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, eukaryotes and viruses, and is approximately 110 amino acids in length.


The actual alignment was detected with superfamily member pfam20356:

Pssm-ID: 466506  Cd Length: 113  Bit Score: 188.26  E-value: 1.16e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2734514880  25 EEKQRSQMLEKQLYDSMIGGSFAGSKYIADKIAIPADLLQARFGQAFKVEEGRIVAYDASGNKIYSRAKPGELAQFDEAL 104
Cdd:pfam20356   1 EANGKKTLLETQLYDEMIGGRFTGSKFITDKMAIPADFVQARFGQSFKIEEGKVVAYDGTGNKVYSRSKPGELASFDEAL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2734514880 105 EFLVENYPQKDYILKASGNNGGGSRPTQHDIGQ 137
Cdd:pfam20356  81 EFLVEQYPQKDHILKASGNSGGGSHQSQHQAGQ 113
 
Name Accession Description Interval E-value
DUF6651 pfam20356
Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. ...
 25-137 1.16e-62

Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, eukaryotes and viruses, and is approximately 110 amino acids in length.


Pssm-ID: 466506  Cd Length: 113  Bit Score: 188.26  E-value: 1.16e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2734514880  25 EEKQRSQMLEKQLYDSMIGGSFAGSKYIADKIAIPADLLQARFGQAFKVEEGRIVAYDASGNKIYSRAKPGELAQFDEAL 104
Cdd:pfam20356   1 EANGKKTLLETQLYDEMIGGRFTGSKFITDKMAIPADFVQARFGQSFKIEEGKVVAYDGTGNKVYSRSKPGELASFDEAL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2734514880 105 EFLVENYPQKDYILKASGNNGGGSRPTQHDIGQ 137
Cdd:pfam20356  81 EFLVEQYPQKDHILKASGNSGGGSHQSQHQAGQ 113
 
Name Accession Description Interval E-value
DUF6651 pfam20356
Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. ...
 25-137 1.16e-62

Family of unknown function (DUF6651); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, eukaryotes and viruses, and is approximately 110 amino acids in length.


Pssm-ID: 466506  Cd Length: 113  Bit Score: 188.26  E-value: 1.16e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2734514880  25 EEKQRSQMLEKQLYDSMIGGSFAGSKYIADKIAIPADLLQARFGQAFKVEEGRIVAYDASGNKIYSRAKPGELAQFDEAL 104
Cdd:pfam20356   1 EANGKKTLLETQLYDEMIGGRFTGSKFITDKMAIPADFVQARFGQSFKIEEGKVVAYDGTGNKVYSRSKPGELASFDEAL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2734514880 105 EFLVENYPQKDYILKASGNNGGGSRPTQHDIGQ 137
Cdd:pfam20356  81 EFLVEQYPQKDHILKASGNSGGGSHQSQHQAGQ 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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