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Conserved domains on  [gi|2729447469|ref|WP_344069737|]
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MULTISPECIES: biotin carboxylase N-terminal domain-containing protein, partial [Streptomyces]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PccA super family cl44129
Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];
1-21 5.91e-10

Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];


The actual alignment was detected with superfamily member COG4770:

Pssm-ID: 443802 [Multi-domain]  Cd Length: 466  Bit Score: 50.01  E-value: 5.91e-10
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:COG4770     2 FKKVLIANRGEIAVRIIRTCR 22
 
Name Accession Description Interval E-value
PccA COG4770
Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];
1-21 5.91e-10

Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];


Pssm-ID: 443802 [Multi-domain]  Cd Length: 466  Bit Score: 50.01  E-value: 5.91e-10
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:COG4770     2 FKKVLIANRGEIAVRIIRTCR 22
PRK08591 PRK08591
acetyl-CoA carboxylase biotin carboxylase subunit; Validated
 1-21 3.11e-09

acetyl-CoA carboxylase biotin carboxylase subunit; Validated


Pssm-ID: 236307 [Multi-domain]  Cd Length: 451  Bit Score: 48.26  E-value: 3.11e-09
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK08591    2 FDKILIANRGEIALRIIRACK 22
Biotin_carb_N pfam00289
Biotin carboxylase, N-terminal domain; This domain is structurally related to the PreATP-grasp ...
 2-21 1.11e-07

Biotin carboxylase, N-terminal domain; This domain is structurally related to the PreATP-grasp domain. The family contains the N-terminus of biotin carboxylase enzymes, and propionyl-CoA carboxylase A chain.


Pssm-ID: 425585 [Multi-domain]  Cd Length: 108  Bit Score: 42.47  E-value: 1.11e-07
                          10        20
                  ....*....|....*....|
gi 2729447469   2 RKVLIANRGEIAVRVARACR 21
Cdd:pfam00289   2 KKVLIANRGEIAVRIIRACR 21
 
Name Accession Description Interval E-value
PccA COG4770
Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];
1-21 5.91e-10

Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism];


Pssm-ID: 443802 [Multi-domain]  Cd Length: 466  Bit Score: 50.01  E-value: 5.91e-10
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:COG4770     2 FKKVLIANRGEIAVRIIRTCR 22
PRK08591 PRK08591
acetyl-CoA carboxylase biotin carboxylase subunit; Validated
 1-21 3.11e-09

acetyl-CoA carboxylase biotin carboxylase subunit; Validated


Pssm-ID: 236307 [Multi-domain]  Cd Length: 451  Bit Score: 48.26  E-value: 3.11e-09
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK08591    2 FDKILIANRGEIALRIIRACK 22
PycA COG1038
Pyruvate carboxylase [Energy production and conversion]; Pyruvate carboxylase is part of the ...
 1-20 4.97e-09

Pyruvate carboxylase [Energy production and conversion]; Pyruvate carboxylase is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440660 [Multi-domain]  Cd Length: 1144  Bit Score: 47.38  E-value: 4.97e-09
                           10        20
                   ....*....|....*....|
gi 2729447469    1 MRKVLIANRGEIAVRVARAC 20
Cdd:COG1038      4 IKKVLVANRGEIAIRVFRAA 23
PRK08654 PRK08654
acetyl-CoA carboxylase biotin carboxylase subunit;
2-21 1.48e-08

acetyl-CoA carboxylase biotin carboxylase subunit;


Pssm-ID: 236325 [Multi-domain]  Cd Length: 499  Bit Score: 46.13  E-value: 1.48e-08
                          10        20
                  ....*....|....*....|
gi 2729447469   2 RKVLIANRGEIAVRVARACR 21
Cdd:PRK08654    3 KKILIANRGEIAIRVMRACR 22
PRK12999 PRK12999
pyruvate carboxylase; Reviewed
 1-21 1.89e-08

pyruvate carboxylase; Reviewed


Pssm-ID: 237263 [Multi-domain]  Cd Length: 1146  Bit Score: 45.90  E-value: 1.89e-08
                           10        20
                   ....*....|....*....|.
gi 2729447469    1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK12999     5 IKKVLVANRGEIAIRIFRAAT 25
PRK05586 PRK05586
acetyl-CoA carboxylase biotin carboxylase subunit;
2-21 1.03e-07

acetyl-CoA carboxylase biotin carboxylase subunit;


Pssm-ID: 180150 [Multi-domain]  Cd Length: 447  Bit Score: 43.93  E-value: 1.03e-07
                          10        20
                  ....*....|....*....|
gi 2729447469   2 RKVLIANRGEIAVRVARACR 21
Cdd:PRK05586    3 KKILIANRGEIAVRIIRACR 22
Biotin_carb_N pfam00289
Biotin carboxylase, N-terminal domain; This domain is structurally related to the PreATP-grasp ...
 2-21 1.11e-07

Biotin carboxylase, N-terminal domain; This domain is structurally related to the PreATP-grasp domain. The family contains the N-terminus of biotin carboxylase enzymes, and propionyl-CoA carboxylase A chain.


Pssm-ID: 425585 [Multi-domain]  Cd Length: 108  Bit Score: 42.47  E-value: 1.11e-07
                          10        20
                  ....*....|....*....|
gi 2729447469   2 RKVLIANRGEIAVRVARACR 21
Cdd:pfam00289   2 KKVLIANRGEIAVRIIRACR 21
PRK07178 PRK07178
acetyl-CoA carboxylase biotin carboxylase subunit;
1-21 3.99e-07

acetyl-CoA carboxylase biotin carboxylase subunit;


Pssm-ID: 180865 [Multi-domain]  Cd Length: 472  Bit Score: 42.01  E-value: 3.99e-07
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK07178    2 IKKILIANRGEIAVRIVRACA 22
PRK06111 PRK06111
acetyl-CoA carboxylase biotin carboxylase subunit; Validated
 3-21 4.38e-07

acetyl-CoA carboxylase biotin carboxylase subunit; Validated


Pssm-ID: 180406 [Multi-domain]  Cd Length: 450  Bit Score: 41.94  E-value: 4.38e-07
                          10
                  ....*....|....*....
gi 2729447469   3 KVLIANRGEIAVRVARACR 21
Cdd:PRK06111    4 KVLIANRGEIAVRIIRTCQ 22
PRK08463 PRK08463
acetyl-CoA carboxylase subunit A; Validated
 1-21 8.92e-07

acetyl-CoA carboxylase subunit A; Validated


Pssm-ID: 169452 [Multi-domain]  Cd Length: 478  Bit Score: 41.34  E-value: 8.92e-07
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK08463    2 IHKILIANRGEIAVRVIRACR 22
PRK12833 PRK12833
acetyl-CoA carboxylase biotin carboxylase subunit; Provisional
 1-21 6.58e-05

acetyl-CoA carboxylase biotin carboxylase subunit; Provisional


Pssm-ID: 183781 [Multi-domain]  Cd Length: 467  Bit Score: 35.89  E-value: 6.58e-05
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK12833    5 IRKVLVANRGEIAVRIIRAAR 25
PRK08462 PRK08462
acetyl-CoA carboxylase biotin carboxylase subunit;
1-21 1.01e-03

acetyl-CoA carboxylase biotin carboxylase subunit;


Pssm-ID: 236269 [Multi-domain]  Cd Length: 445  Bit Score: 32.41  E-value: 1.01e-03
                          10        20
                  ....*....|....*....|.
gi 2729447469   1 MRKVLIANRGEIAVRVARACR 21
Cdd:PRK08462    4 IKRILIANRGEIALRAIRTIQ 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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