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Conserved domains on  [gi|2612391695|ref|WP_317716825|]
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MULTISPECIES: primase C-terminal domain-containing protein [Enterococcus]

Protein Classification

PriCT_1 domain-containing protein( domain architecture ID 10554956)

PriCT_1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PriCT_1 pfam08708
Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of ...
 258-321 3.58e-17

Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of primases.


:

Pssm-ID: 430166  Cd Length: 64  Bit Score: 75.41  E-value: 3.58e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2612391695 258 VVGTKGKLGRNNVIFTLSLAYYASKIEQERCFDDMDVFNSSLNYPLSVSEVKRIVKSAYSGKYK 321
Cdd:pfam08708   1 TLGPVASGGRNNALFRLAGALARRGIDRESVLALLHALNSNLEPPLDESEVEKTVKSVYRYVYA 64
 
Name Accession Description Interval E-value
PriCT_1 pfam08708
Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of ...
 258-321 3.58e-17

Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of primases.


Pssm-ID: 430166  Cd Length: 64  Bit Score: 75.41  E-value: 3.58e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2612391695 258 VVGTKGKLGRNNVIFTLSLAYYASKIEQERCFDDMDVFNSSLNYPLSVSEVKRIVKSAYSGKYK 321
Cdd:pfam08708   1 TLGPVASGGRNNALFRLAGALARRGIDRESVLALLHALNSNLEPPLDESEVEKTVKSVYRYVYA 64
PriCT_1 smart00942
Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of ...
 258-321 6.29e-03

Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of primases.


Pssm-ID: 214926  Cd Length: 66  Bit Score: 35.39  E-value: 6.29e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2612391695  258 VVGTKGKLGRNNVIFTLS-LAYYASKIEQERCFDDMDVFNSSL-NYPLSVSEVKRIVKSAYSGKYK 321
Cdd:smart00942   1 FLGGVDEGNRNNTLFRLAgRLLRRGYVDEEEAYALLLAANSANcNPPLPERELEKTAESAYRRESR 66
 
Name Accession Description Interval E-value
PriCT_1 pfam08708
Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of ...
 258-321 3.58e-17

Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of primases.


Pssm-ID: 430166  Cd Length: 64  Bit Score: 75.41  E-value: 3.58e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2612391695 258 VVGTKGKLGRNNVIFTLSLAYYASKIEQERCFDDMDVFNSSLNYPLSVSEVKRIVKSAYSGKYK 321
Cdd:pfam08708   1 TLGPVASGGRNNALFRLAGALARRGIDRESVLALLHALNSNLEPPLDESEVEKTVKSVYRYVYA 64
PriCT_1 smart00942
Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of ...
 258-321 6.29e-03

Primase C terminal 1 (PriCT-1); This alpha helical domain is found at the C terminal of primases.


Pssm-ID: 214926  Cd Length: 66  Bit Score: 35.39  E-value: 6.29e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2612391695  258 VVGTKGKLGRNNVIFTLS-LAYYASKIEQERCFDDMDVFNSSL-NYPLSVSEVKRIVKSAYSGKYK 321
Cdd:smart00942   1 FLGGVDEGNRNNTLFRLAgRLLRRGYVDEEEAYALLLAANSANcNPPLPERELEKTAESAYRRESR 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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