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Conserved domains on  [gi|2496854864|ref|WP_280186772|]
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PoNe immunity protein domain-containing protein [Bacteroides fragilis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1911 super family cl07503
Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial ...
 117-225 1.43e-28

Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial proteins.


The actual alignment was detected with superfamily member pfam08929:

Pssm-ID: 462638  Cd Length: 105  Bit Score: 103.91  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2496854864 117 KDYIYDTLIRYRFPdWERTTNQVLYPSPYRiaiTVTELAEQDKAEAVKRLEKYLKkEWYRGHSDLSWHDDHKYGIN-HDG 195
Cdd:pfam08929   1 EDWLLDFLLAAADG-WTNPGSELLHPNPYA---KLLEAIEEDKEEQSKALKKYLK-QWYKGHRDCGWHNAHKREQGgYYG 75

                          90       100       110
                  ....*....|....*....|....*....|
gi 2496854864 196 YWCFESGALVKVLGLDDSSLKGLPYYPYDM 225
Cdd:pfam08929  76 YWAFEAAAVAKILGLDDSALKDHPYYPYDL 105
DUF1910 super family cl07502
Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial ...
 37-104 7.42e-11

Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial proteins.


The actual alignment was detected with superfamily member pfam08928:

Pssm-ID: 430325  Cd Length: 117  Bit Score: 57.73  E-value: 7.42e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2496854864  37 IGYDSLFNYRLRYSLVQYSMGQDIDKLKNNYVKALKTMPRFWTDNGFYIEMLWLLSIGIMLDYEDDLI 104
Cdd:pfam08928  45 GTKRKIFMYYLELLIARYSLGDSIDELEADYLDLITYWEHVWEPEAGYIVLLWMLSLGILFEVDKEQL 112
 
Name Accession Description Interval E-value
DUF1911 pfam08929
Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial ...
 117-225 1.43e-28

Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial proteins.


Pssm-ID: 462638  Cd Length: 105  Bit Score: 103.91  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2496854864 117 KDYIYDTLIRYRFPdWERTTNQVLYPSPYRiaiTVTELAEQDKAEAVKRLEKYLKkEWYRGHSDLSWHDDHKYGIN-HDG 195
Cdd:pfam08929   1 EDWLLDFLLAAADG-WTNPGSELLHPNPYA---KLLEAIEEDKEEQSKALKKYLK-QWYKGHRDCGWHNAHKREQGgYYG 75

                          90       100       110
                  ....*....|....*....|....*....|
gi 2496854864 196 YWCFESGALVKVLGLDDSSLKGLPYYPYDM 225
Cdd:pfam08929  76 YWAFEAAAVAKILGLDDSALKDHPYYPYDL 105
DUF1910 pfam08928
Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial ...
 37-104 7.42e-11

Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial proteins.


Pssm-ID: 430325  Cd Length: 117  Bit Score: 57.73  E-value: 7.42e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2496854864  37 IGYDSLFNYRLRYSLVQYSMGQDIDKLKNNYVKALKTMPRFWTDNGFYIEMLWLLSIGIMLDYEDDLI 104
Cdd:pfam08928  45 GTKRKIFMYYLELLIARYSLGDSIDELEADYLDLITYWEHVWEPEAGYIVLLWMLSLGILFEVDKEQL 112
 
Name Accession Description Interval E-value
DUF1911 pfam08929
Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial ...
 117-225 1.43e-28

Domain of unknown function (DUF1911); This domain is found in a set of hypothetical bacterial proteins.


Pssm-ID: 462638  Cd Length: 105  Bit Score: 103.91  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2496854864 117 KDYIYDTLIRYRFPdWERTTNQVLYPSPYRiaiTVTELAEQDKAEAVKRLEKYLKkEWYRGHSDLSWHDDHKYGIN-HDG 195
Cdd:pfam08929   1 EDWLLDFLLAAADG-WTNPGSELLHPNPYA---KLLEAIEEDKEEQSKALKKYLK-QWYKGHRDCGWHNAHKREQGgYYG 75

                          90       100       110
                  ....*....|....*....|....*....|
gi 2496854864 196 YWCFESGALVKVLGLDDSSLKGLPYYPYDM 225
Cdd:pfam08929  76 YWAFEAAAVAKILGLDDSALKDHPYYPYDL 105
DUF1910 pfam08928
Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial ...
 37-104 7.42e-11

Domain of unknown function (DUF1910); This domain is found in a set of hypothetical bacterial proteins.


Pssm-ID: 430325  Cd Length: 117  Bit Score: 57.73  E-value: 7.42e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2496854864  37 IGYDSLFNYRLRYSLVQYSMGQDIDKLKNNYVKALKTMPRFWTDNGFYIEMLWLLSIGIMLDYEDDLI 104
Cdd:pfam08928  45 GTKRKIFMYYLELLIARYSLGDSIDELEADYLDLITYWEHVWEPEAGYIVLLWMLSLGILFEVDKEQL 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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