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Conserved domains on  [gi|2482345207|ref|WP_278045047|]
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DNA translocase FtsK [Burkholderia vietnamiensis]

Protein Classification

Ftsk_gamma domain-containing protein( domain architecture ID 10559393)

Ftsk_gamma domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 211-270 2.49e-28

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


:

Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 103.22  E-value: 2.49e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482345207 211 DPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKS 270
Cdd:pfam09397   4 DELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVLIT 63
 
Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 211-270 2.49e-28

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 103.22  E-value: 2.49e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482345207 211 DPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKS 270
Cdd:pfam09397   4 DELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVLIT 63
Ftsk_gamma smart00843
This domain directs oriented DNA translocation and forms a winged helix structure; Mutated ...
 208-270 7.81e-28

This domain directs oriented DNA translocation and forms a winged helix structure; Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 197911 [Multi-domain]  Cd Length: 63  Bit Score: 101.72  E-value: 7.81e-28
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2482345207  208 GNHDPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKS 270
Cdd:smart00843   1 EEEDELYDEAVELVIETQKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPANGSKPREVLVT 63
FtsK COG1674
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ...
 206-276 8.50e-27

DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441280 [Multi-domain]  Cd Length: 611  Bit Score: 109.24  E-value: 8.50e-27
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2482345207 206 EQGNHDPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKSRNDAEE 276
Cdd:COG1674   540 DDDEDDELFDEAVELVVETQKASTSLLQRRLRIGYNRAARLIDQMEERGIVGPAEGSKPREVLVSPEELEE 610
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 211-268 1.76e-18

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 85.14  E-value: 1.76e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2482345207  211 DPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVL 268
Cdd:PRK10263  1292 DPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVL 1349
 
Name Accession Description Interval E-value
FtsK_gamma pfam09397
Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix ...
 211-270 2.49e-28

Ftsk gamma domain; This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 462786 [Multi-domain]  Cd Length: 63  Bit Score: 103.22  E-value: 2.49e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482345207 211 DPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKS 270
Cdd:pfam09397   4 DELYEEAVEIVIETGKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPADGSKPREVLIT 63
Ftsk_gamma smart00843
This domain directs oriented DNA translocation and forms a winged helix structure; Mutated ...
 208-270 7.81e-28

This domain directs oriented DNA translocation and forms a winged helix structure; Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


Pssm-ID: 197911 [Multi-domain]  Cd Length: 63  Bit Score: 101.72  E-value: 7.81e-28
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2482345207  208 GNHDPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKS 270
Cdd:smart00843   1 EEEDELYDEAVELVIETQKASTSLLQRRLRIGYNRAARLIDQLEEEGIVGPANGSKPREVLVT 63
FtsK COG1674
DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, ...
 206-276 8.50e-27

DNA segregation ATPase FtsK/SpoIIIE or related protein [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 441280 [Multi-domain]  Cd Length: 611  Bit Score: 109.24  E-value: 8.50e-27
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2482345207 206 EQGNHDPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVLKSRNDAEE 276
Cdd:COG1674   540 DDDEDDELFDEAVELVVETQKASTSLLQRRLRIGYNRAARLIDQMEERGIVGPAEGSKPREVLVSPEELEE 610
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 211-268 1.76e-18

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 85.14  E-value: 1.76e-18
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2482345207  211 DPLYADAEAFVVAEQRASVSAVQRHFRIGYNRAARLIEQLEQRGVVSSMDESGNRTVL 268
Cdd:PRK10263  1292 DPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVL 1349
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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