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Conserved domains on  [gi|2482287434|ref|WP_278002712|]
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putative mucin/carbohydrate-binding domain-containing protein, partial [Bacillus sp. GM_Baccil_2]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mucin_bdg super family cl24152
Putative mucin or carbohydrate-binding module; This family is the putative binding domain for ...
 28-147 1.43e-18

Putative mucin or carbohydrate-binding module; This family is the putative binding domain for the substrates of enhancin, and other similar metallopeptidases. This is not the enzymically active, peptidase, part of the proteins - see pfam13402.


The actual alignment was detected with superfamily member pfam03272:

Pssm-ID: 460871  Cd Length: 116  Bit Score: 75.83  E-value: 1.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482287434  28 SLKGYSDREIAKVDYDKTVEEMKVKLEAGVPHSYFAS-TYASIKVQNSSGNVLYNKEIVGNKQQNAESQTVPVKVGDYIE 106
Cdd:pfam03272   1 QFLGLSDDQFATVTLDLVKKKLTVTVTNTTPHYYFPNeTYASIRVYDADGNEKLNKDIEGTEKTFAGVDEIPFKGGYVLK 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2482287434 107 FTHIEgeavkEKTRATLLNLENNKQVYIGKKRTYQVTSTGL 147
Cdd:pfam03272  81 IFHAE-----PSNRLRINPDQGDVLDPKSKTNSFIITSKGL 116
 
Name Accession Description Interval E-value
Mucin_bdg pfam03272
Putative mucin or carbohydrate-binding module; This family is the putative binding domain for ...
 28-147 1.43e-18

Putative mucin or carbohydrate-binding module; This family is the putative binding domain for the substrates of enhancin, and other similar metallopeptidases. This is not the enzymically active, peptidase, part of the proteins - see pfam13402.


Pssm-ID: 460871  Cd Length: 116  Bit Score: 75.83  E-value: 1.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482287434  28 SLKGYSDREIAKVDYDKTVEEMKVKLEAGVPHSYFAS-TYASIKVQNSSGNVLYNKEIVGNKQQNAESQTVPVKVGDYIE 106
Cdd:pfam03272   1 QFLGLSDDQFATVTLDLVKKKLTVTVTNTTPHYYFPNeTYASIRVYDADGNEKLNKDIEGTEKTFAGVDEIPFKGGYVLK 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2482287434 107 FTHIEgeavkEKTRATLLNLENNKQVYIGKKRTYQVTSTGL 147
Cdd:pfam03272  81 IFHAE-----PSNRLRINPDQGDVLDPKSKTNSFIITSKGL 116
 
Name Accession Description Interval E-value
Mucin_bdg pfam03272
Putative mucin or carbohydrate-binding module; This family is the putative binding domain for ...
 28-147 1.43e-18

Putative mucin or carbohydrate-binding module; This family is the putative binding domain for the substrates of enhancin, and other similar metallopeptidases. This is not the enzymically active, peptidase, part of the proteins - see pfam13402.


Pssm-ID: 460871  Cd Length: 116  Bit Score: 75.83  E-value: 1.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482287434  28 SLKGYSDREIAKVDYDKTVEEMKVKLEAGVPHSYFAS-TYASIKVQNSSGNVLYNKEIVGNKQQNAESQTVPVKVGDYIE 106
Cdd:pfam03272   1 QFLGLSDDQFATVTLDLVKKKLTVTVTNTTPHYYFPNeTYASIRVYDADGNEKLNKDIEGTEKTFAGVDEIPFKGGYVLK 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2482287434 107 FTHIEgeavkEKTRATLLNLENNKQVYIGKKRTYQVTSTGL 147
Cdd:pfam03272  81 IFHAE-----PSNRLRINPDQGDVLDPKSKTNSFIITSKGL 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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