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Conserved domains on  [gi|2130217741|ref|WP_228261864|]
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Ig-like domain-containing protein, partial [Acinetobacter baumannii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Big_12 pfam19078
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 33-124 5.97e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


:

Pssm-ID: 436946 [Multi-domain]  Cd Length: 102  Bit Score: 78.44  E-value: 5.97e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130217741  33 DTLAPGLVITALDPALTATESTTISFTFSEAVSGFDIDDITPVGGTLSNLvQSTTNPNVWTATFT--ADGSGAAPSISVA 110
Cdd:pfam19078   1 DTTAPTVTISSADSALKAGETATVTITFSEAVTGFDNADLTVANGTLSNL-SSTDGGTTWTATFTptAGVEGATNVITLA 79

                          90
                  ....*....|....
gi 2130217741 111 DGAYTDLAGNLGTG 124
Cdd:pfam19078  80 AGGYTDLAGNAGTG 93
 
Name Accession Description Interval E-value
Big_12 pfam19078
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 33-124 5.97e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 436946 [Multi-domain]  Cd Length: 102  Bit Score: 78.44  E-value: 5.97e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130217741  33 DTLAPGLVITALDPALTATESTTISFTFSEAVSGFDIDDITPVGGTLSNLvQSTTNPNVWTATFT--ADGSGAAPSISVA 110
Cdd:pfam19078   1 DTTAPTVTISSADSALKAGETATVTITFSEAVTGFDNADLTVANGTLSNL-SSTDGGTTWTATFTptAGVEGATNVITLA 79

                          90
                  ....*....|....
gi 2130217741 111 DGAYTDLAGNLGTG 124
Cdd:pfam19078  80 AGGYTDLAGNAGTG 93
 
Name Accession Description Interval E-value
Big_12 pfam19078
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 33-124 5.97e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 436946 [Multi-domain]  Cd Length: 102  Bit Score: 78.44  E-value: 5.97e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130217741  33 DTLAPGLVITALDPALTATESTTISFTFSEAVSGFDIDDITPVGGTLSNLvQSTTNPNVWTATFT--ADGSGAAPSISVA 110
Cdd:pfam19078   1 DTTAPTVTISSADSALKAGETATVTITFSEAVTGFDNADLTVANGTLSNL-SSTDGGTTWTATFTptAGVEGATNVITLA 79

                          90
                  ....*....|....
gi 2130217741 111 DGAYTDLAGNLGTG 124
Cdd:pfam19078  80 AGGYTDLAGNAGTG 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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