putative Ig domain-containing protein, partial [Corynebacterium sp. HMSC066C02]
Protein Classification
hotdog family protein( domain architecture ID 107)
hotdog family protein may have metabolic roles such as thioester hydrolysis in fatty acid metabolism and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| hot_dog super family | cl00509 | The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl ... |
37-92 | 3.23e-04 | ||
The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis. The actual alignment was detected with superfamily member pfam14539: Pssm-ID: 469797 Cd Length: 131 Bit Score: 38.01 E-value: 3.23e-04
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| Name | Accession | Description | Interval | E-value | ||
| DUF4442 | pfam14539 | Domain of unknown function (DUF4442); This family of proteins is found in bacteria, archaea ... |
37-92 | 3.23e-04 | ||
Domain of unknown function (DUF4442); This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important. Pssm-ID: 434027 Cd Length: 131 Bit Score: 38.01 E-value: 3.23e-04
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| Name | Accession | Description | Interval | E-value | |||
| DUF4442 | pfam14539 | Domain of unknown function (DUF4442); This family of proteins is found in bacteria, archaea ... |
37-92 | 3.23e-04 | |||
Domain of unknown function (DUF4442); This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important. Pssm-ID: 434027 Cd Length: 131 Bit Score: 38.01 E-value: 3.23e-04
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| ResB | pfam05140 | ResB-like family; This family includes both ResB and cytochrome c biogenesis proteins. ... |
9-92 | 4.11e-04 | |||
ResB-like family; This family includes both ResB and cytochrome c biogenesis proteins. Mutations in ResB indicate that they are essential for growth. ResB is predicted to be a transmembrane protein. Pssm-ID: 428331 Cd Length: 445 Bit Score: 38.73 E-value: 4.11e-04
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| He_PIG | pfam05345 | Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
31-92 | 4.29e-03 | |||
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei. Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 34.37 E-value: 4.29e-03
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