|
Name |
Accession |
Description |
Interval |
E-value |
| SCP-x_thiolase |
cd00829 |
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ... |
186-556 |
3.72e-93 |
|
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Pssm-ID: 238425 [Multi-domain] Cd Length: 375 Bit Score: 289.93 E-value: 3.72e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 186 GIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTYPGGGNLGGFGEGGVTSLEAALGIRPTWHnggIETFGP 265
Cdd:cd00829 2 GVGMTPFGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATR---VEAAGA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 266 GGS--VIAAMLAVAGGLARHVLCFRtlwEATFNELMKQGKIIP-SMGRTDSWQWPFGATSAAHTLALNAQRHFHRYGTTK 342
Cdd:cd00829 79 SGSaaVRAAAAAIASGLADVVLVVG---AEKMSDVPTGDEAGGrASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 343 ETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGTQ 422
Cdd:cd00829 156 EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 423 IIERIDWDQSTLTHEPQVLGQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGkNIARDGVL 502
Cdd:cd00829 236 SDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREG-DTAIGGDL 314
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1942661812 503 PLNTHGGQLSHGRTHGMGLLH---EAVSQLRGEAGERQVADARVGVVSSGGLTPSGV 556
Cdd:cd00829 315 PVNTSGGLLSKGHPLGATGLAqavEAVRQLRGEAGARQVPGARVGLAHNIGGTGSAA 371
|
|
| PRK07855 |
PRK07855 |
lipid-transfer protein; Provisional |
178-560 |
2.11e-71 |
|
lipid-transfer protein; Provisional
Pssm-ID: 181147 [Multi-domain] Cd Length: 386 Bit Score: 233.72 E-value: 2.11e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 178 FEDKVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTYPGGgnlggfgeggvTSLEA----ALGIRP 253
Cdd:PRK07855 2 LSGKAAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD-----------TNPEIavarALGIGE 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 254 ------TWHNGGietfGPGGSVIAAMLAVAGGLARHVLCFRTLWE---ATFNELMKQGKIIPSMGRTD-SWQWPFGATSA 323
Cdd:PRK07855 71 lkffsrIHYGGG----AACATVQQAAMAVATGVADVVVCYRAFNErsgMRFGQGQTGLAENPTSTGVDyGWSYPHGLLTP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 324 AHTLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAV-YRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSA 402
Cdd:PRK07855 147 AAWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWfYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTS 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 403 VDAARDLAKPPVLVEAVGtQIIERidwDQSTLT--HEPQVLG------QAAHVWTRTSLRPADVDVAELYDGFTMNCLSW 474
Cdd:PRK07855 227 AERARDLKQRPAVIKAAA-QGSGA---DQYMMTsyYRDDITGlpemglVARQLWAQSGLGPADIDTAILYDHFTPFVLMQ 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 475 IEALGFCGIGEAREFLDGGkNIARDGVLPLNTHGGQLSHGRTHGMGLLHEAVSQLRGEAgERQVADARVGVVSSGGLTPS 554
Cdd:PRK07855 303 LEELGFCGRGEAKDFIADG-ALELGGRLPINTHGGQLGEAYIHGMNGIAEAVRQLRGTS-VNQVPGVENVLVTAGTGVPT 380
|
....*.
gi 1942661812 555 GVLLLR 560
Cdd:PRK07855 381 SGLILG 386
|
|
| COG1545 |
COG1545 |
Uncharacterized OB-fold protein, contains Zn-ribbon domain [General function prediction only]; |
31-145 |
1.31e-33 |
|
Uncharacterized OB-fold protein, contains Zn-ribbon domain [General function prediction only];
Pssm-ID: 441154 [Multi-domain] Cd Length: 116 Bit Score: 123.85 E-value: 1.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 31 FWKAGADGTLRFQECQACQALIHPPAPVCRYCRSRDIGVRDVSGKATLAGFTVNHRFSVP-GMPAPYVIAQVAIAEDPRV 109
Cdd:COG1545 1 FWRALAEGRLLGQRCPACGTVYFPPRPVCPHCGSEDLEWVELSGRGTVYSYTVVHRPPPPfEDEVPYVVALVELDEGVRV 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 1942661812 110 rlTTNIVDCDPDQLELGQQVEVVFEQIE--DVWLPLFK 145
Cdd:COG1545 81 --LGRLVGVDPEDVRIGMRVRVVFRPIDedGRTLPVFR 116
|
|
| OB_aCoA_assoc |
pfam01796 |
DUF35 OB-fold domain, acyl-CoA-associated; The structure of a DUF35 representative reveals two ... |
70-134 |
8.98e-14 |
|
DUF35 OB-fold domain, acyl-CoA-associated; The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin-like zinc ribbon domain and a C-terminal OB fold domain represented in this entry. OB-folds are frequently found to bind nucleic acids suggesting this domain might bind to DNA or RNA (Topsan http://www.topsan.org/). Genomic context shows it to be adjacent to acyl-CoA transferase (http:/www.microbesonline.org/).
Pssm-ID: 460333 Cd Length: 65 Bit Score: 66.09 E-value: 8.98e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1942661812 70 RDVSGKATLAGFTVNHR-FSVPGMPAPYVIAQVAIAEDPRVrlTTNIVDCDPDQLELGQQVEVVFE 134
Cdd:pfam01796 2 VELSGRGTVYSYTVVHRpPPGFADDVPYVVGLVELDEGPRV--MARLVGVDPDEVRIGMRVRAVFR 65
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SCP-x_thiolase |
cd00829 |
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ... |
186-556 |
3.72e-93 |
|
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Pssm-ID: 238425 [Multi-domain] Cd Length: 375 Bit Score: 289.93 E-value: 3.72e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 186 GIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTYPGGGNLGGFGEGGVTSLEAALGIRPTWHnggIETFGP 265
Cdd:cd00829 2 GVGMTPFGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATR---VEAAGA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 266 GGS--VIAAMLAVAGGLARHVLCFRtlwEATFNELMKQGKIIP-SMGRTDSWQWPFGATSAAHTLALNAQRHFHRYGTTK 342
Cdd:cd00829 79 SGSaaVRAAAAAIASGLADVVLVVG---AEKMSDVPTGDEAGGrASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 343 ETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGTQ 422
Cdd:cd00829 156 EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 423 IIERIDWDQSTLTHEPQVLGQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGkNIARDGVL 502
Cdd:cd00829 236 SDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREG-DTAIGGDL 314
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1942661812 503 PLNTHGGQLSHGRTHGMGLLH---EAVSQLRGEAGERQVADARVGVVSSGGLTPSGV 556
Cdd:cd00829 315 PVNTSGGLLSKGHPLGATGLAqavEAVRQLRGEAGARQVPGARVGLAHNIGGTGSAA 371
|
|
| PRK07855 |
PRK07855 |
lipid-transfer protein; Provisional |
178-560 |
2.11e-71 |
|
lipid-transfer protein; Provisional
Pssm-ID: 181147 [Multi-domain] Cd Length: 386 Bit Score: 233.72 E-value: 2.11e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 178 FEDKVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTYPGGgnlggfgeggvTSLEA----ALGIRP 253
Cdd:PRK07855 2 LSGKAAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD-----------TNPEIavarALGIGE 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 254 ------TWHNGGietfGPGGSVIAAMLAVAGGLARHVLCFRTLWE---ATFNELMKQGKIIPSMGRTD-SWQWPFGATSA 323
Cdd:PRK07855 71 lkffsrIHYGGG----AACATVQQAAMAVATGVADVVVCYRAFNErsgMRFGQGQTGLAENPTSTGVDyGWSYPHGLLTP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 324 AHTLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAV-YRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSA 402
Cdd:PRK07855 147 AAWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWfYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTS 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 403 VDAARDLAKPPVLVEAVGtQIIERidwDQSTLT--HEPQVLG------QAAHVWTRTSLRPADVDVAELYDGFTMNCLSW 474
Cdd:PRK07855 227 AERARDLKQRPAVIKAAA-QGSGA---DQYMMTsyYRDDITGlpemglVARQLWAQSGLGPADIDTAILYDHFTPFVLMQ 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 475 IEALGFCGIGEAREFLDGGkNIARDGVLPLNTHGGQLSHGRTHGMGLLHEAVSQLRGEAgERQVADARVGVVSSGGLTPS 554
Cdd:PRK07855 303 LEELGFCGRGEAKDFIADG-ALELGGRLPINTHGGQLGEAYIHGMNGIAEAVRQLRGTS-VNQVPGVENVLVTAGTGVPT 380
|
....*.
gi 1942661812 555 GVLLLR 560
Cdd:PRK07855 381 SGLILG 386
|
|
| PRK06158 |
PRK06158 |
thiolase; Provisional |
181-557 |
4.85e-70 |
|
thiolase; Provisional
Pssm-ID: 180434 [Multi-domain] Cd Length: 384 Bit Score: 230.30 E-value: 4.85e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 181 KVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTypgggnLGGFGEGGVTSLEAALGIRPTWhnggI 260
Cdd:PRK06158 9 RTAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFT------ASPDDALWGLSVAEYLGIRPRF----V 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 261 ETFGPGGS-----VIAAMLAVAGGLARHVL-CFRTlweatfNELMKQGKIIpSMGRTDSWQWPFGATSAAHTLALNAQRH 334
Cdd:PRK06158 79 DGTMIGGSsflahLLPAALALEAGLCDVALiCYGS------NQRSAGGKLR-SMLDPQPYEAPYKPVNPVSAYALAAARH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 335 FHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPV 414
Cdd:PRK06158 152 MHQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPV 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 415 LVEAVGTQIIERIDWDQSTLTHEPQVLgQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGK 494
Cdd:PRK06158 232 YVLGAAAATWHRQISSMPDLTVTAAAE-SGPRAFAMAGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGR 310
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1942661812 495 nIARDGVLPLNTHGGQLS--HGRTHGMGLLHEAVSQLRGEAGERQVADARVGVVSSGGltpsGVL 557
Cdd:PRK06158 311 -IAPGGRLPVNTNGGGLScvHPGMYGLFLLIEAVRQLRGEAGERQVAGAEVALAHGNG----GVL 370
|
|
| PRK12578 |
PRK12578 |
thiolase domain-containing protein; |
181-538 |
1.07e-39 |
|
thiolase domain-containing protein;
Pssm-ID: 183606 [Multi-domain] Cd Length: 385 Bit Score: 148.84 E-value: 1.07e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 181 KVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADID----GLSTYPGGGNLGGFGEGGVTSLEAALGIRptwh 256
Cdd:PRK12578 2 RVAVIGVGNSKFGRRDDVSVQELAWESIKEALNDAGVSQTDIElvvvGSTAYRGIELYPAPIVAEYSGLTGKVPLR---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 257 nggIETFGPGGS--VIAAMLAVAGGLARHVLcfrtlweATFNELMKQGKIIPSM---GRTDSWQWPF---GATSAAHtLA 328
Cdd:PRK12578 78 ---VEAMCATGLaaSLTAYTAVASGLVDMAI-------AVGVDKMTEVDTSTSLaigGRGGNYQWEYhfyGTTFPTY-YA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 329 LNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARD 408
Cdd:PRK12578 147 LYATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKE 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 409 LA-KPPVLVEAVG-----TQIIERIDWDQSTLTHEpqvlgQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCG 482
Cdd:PRK12578 227 LKiDSPVWITGIGyandyAYVARRGEWVGFKATQL-----AARQAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTE 301
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1942661812 483 IGEAREFLDGGKNiARDGVLPLNTHGGQLSHGR---THGMGLLHEAVSQLRGEAGERQV 538
Cdd:PRK12578 302 KGKGGKFIEEGQS-EKGGKVGVNLFGGLKAKGHplgATGLSMIYEITKQLRDEAGKLQQ 359
|
|
| PRK06064 |
PRK06064 |
thiolase domain-containing protein; |
181-544 |
1.40e-38 |
|
thiolase domain-containing protein;
Pssm-ID: 235688 [Multi-domain] Cd Length: 389 Bit Score: 145.81 E-value: 1.40e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 181 KVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADID--------------------------GLSTYPGggnl 234
Cdd:PRK06064 3 DVAIIGVGQTKFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDamyvgnmsaglfvsqehiaaliadyaGLAPIPA---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 235 ggfgeggvTSLEAALGirptwhnggietfgPGGSVIA-AMLAVAGGLARHVLcfrtlweATFNELMKQ---GKIIPSMGR 310
Cdd:PRK06064 79 --------TRVEAACA--------------SGGAALRqAYLAVASGEADVVL-------AAGVEKMTDvptPDATEAIAR 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 311 TDSWQWP--FGATSAAHTlALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDC 388
Cdd:PRK06064 130 AGDYEWEefFGATFPGLY-ALIARRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLKLLDC 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 389 DVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGTQIieridwDQSTLTHEPQVLG-QAAHV-----WTRTSLRPADVDVAE 462
Cdd:PRK06064 209 SPITDGAAAVILASEEKAKEYTDTPVWIKASGQAS------DTIALHDRKDFTTlDAAVVaaekaYKMAGIEPKDIDVAE 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 463 LYDGFTMNCLSWIEALGFCGIGEAREFLDGGKnIARDGVLPLNTHGGQLSHGrtH-----GMGLLHEAVSQLRGEA--GE 535
Cdd:PRK06064 283 VHDCFTIAEILAYEDLGFAKKGEGGKLAREGQ-TYIGGDIPVNPSGGLKAKG--HpvgatGVSQAVEIVWQLRGEAekGR 359
|
....*....
gi 1942661812 536 RQVADARVG 544
Cdd:PRK06064 360 QQVIGAGYG 368
|
|
| PRK08142 |
PRK08142 |
thiolase domain-containing protein; |
211-555 |
6.00e-35 |
|
thiolase domain-containing protein;
Pssm-ID: 236164 [Multi-domain] Cd Length: 388 Bit Score: 135.60 E-value: 6.00e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 211 AIADAGLTIADIDGLSTypgggnLGGFGEGGVTSLEAALGIRPTwHNGGIETfgpGGS-----VIAAMLAVAGGLARHVL 285
Cdd:PRK08142 36 ALADAGLSLADVDGYFC------AGDAPGLGPASMVDYLGLKLR-HVDSTET---GGSsylahVGHAAQAIAAGKCSVAL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 286 CfrTLWEATFNELMKQGKI-IPSMGRTDS-WQWPFGATSAAhTLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAV 363
Cdd:PRK08142 106 I--TLAGRPRSEGSSGTEPrNWGADAPDApFEAPYGPTTHN-LYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAM 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 364 YRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLV----EAVGTQIIERIDWDQSTLthepQ 439
Cdd:PRK08142 183 LRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVlgagEAIKGQMGGKVDLTYSGA----A 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 440 VLGQAAhvWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGKNIARDGVLPLNTHGGQL--SH-GRT 516
Cdd:PRK08142 259 WSGPAA--FAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLcnNHpANR 336
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1942661812 517 HGMGLLHEAVSQLRGEAGER-QVADARVGVVS-SGGLTPSG 555
Cdd:PRK08142 337 GGMTKVIEAVRQLRGEAHPAvQVPNCDLALAHgTGGLLGSR 377
|
|
| COG1545 |
COG1545 |
Uncharacterized OB-fold protein, contains Zn-ribbon domain [General function prediction only]; |
31-145 |
1.31e-33 |
|
Uncharacterized OB-fold protein, contains Zn-ribbon domain [General function prediction only];
Pssm-ID: 441154 [Multi-domain] Cd Length: 116 Bit Score: 123.85 E-value: 1.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 31 FWKAGADGTLRFQECQACQALIHPPAPVCRYCRSRDIGVRDVSGKATLAGFTVNHRFSVP-GMPAPYVIAQVAIAEDPRV 109
Cdd:COG1545 1 FWRALAEGRLLGQRCPACGTVYFPPRPVCPHCGSEDLEWVELSGRGTVYSYTVVHRPPPPfEDEVPYVVALVELDEGVRV 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 1942661812 110 rlTTNIVDCDPDQLELGQQVEVVFEQIE--DVWLPLFK 145
Cdd:COG1545 81 --LGRLVGVDPEDVRIGMRVRVVFRPIDedGRTLPVFR 116
|
|
| PRK06157 |
PRK06157 |
acetyl-CoA acetyltransferase; Validated |
180-556 |
1.24e-30 |
|
acetyl-CoA acetyltransferase; Validated
Pssm-ID: 180433 [Multi-domain] Cd Length: 398 Bit Score: 123.60 E-value: 1.24e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 180 DKVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDG--LSTYPGGGNLGGFGeggvTSLEAALGIrptwHN 257
Cdd:PRK06157 7 DKVAILGMGCTKFGERWDAGAEDLMVEAFLEALADAGIEPKDIDAawFGTHYDEIGSGKSG----TPLSRALRL----PN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 258 GGI---ETFGPGGS--VIAAMLAVAGGLARHVLcfrtlweATFNELMK---QGKIIPSMGRTDSWQWPFGATSAAhTLAL 329
Cdd:PRK06157 79 IPVtrvENFCATGSeaFRGAVYAVASGAYDIAL-------ALGVEKLKdtgYGGLPVANPGTLADMTMPNVTAPG-NFAQ 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 330 NAQRHFHRYGTT----KETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDA 405
Cdd:PRK06157 151 LASAYAAKYGVSredlKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEI 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 406 ARDLAK-PPVLVEAVGTQI-----IERIDWDQSTLtHEPQVLGQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALG 479
Cdd:PRK06157 231 ARALGKkDPVYVKALQLAVsngweLQYNGWDGSYF-PTTRIAARKAYREAGITDPREELSMAEVHDCFSITELVTMEDLG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 480 FCGIGEA-REFLDGGKNIarDGVLPLNTHGGQLSHGrtH-----GMGLLHEAVSQLRGEAGERQVADARVGVVSS-GGLT 552
Cdd:PRK06157 310 LSERGQAwRDVLDGFFDA--DGGLPCQIDGGLKCFG--HpigasGLRMLYEMYLQLLGRAGERQLKNPRLALTHNlGGAP 385
|
....
gi 1942661812 553 PSGV 556
Cdd:PRK06157 386 GQNV 389
|
|
| PRK06065 |
PRK06065 |
thiolase domain-containing protein; |
172-539 |
1.01e-27 |
|
thiolase domain-containing protein;
Pssm-ID: 180379 [Multi-domain] Cd Length: 392 Bit Score: 114.92 E-value: 1.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 172 MLTTEKFEDKVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDGLSTYPGGGNLGGFGEGGVTSLEAALGI 251
Cdd:PRK06065 1 MKVNIHLNKRVAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 252 -RPT---WHNGGIETFGPggsvIAAMLAVAGGLARHVLC----------------FRTLWEATFNELMKQGKIipsmgrt 311
Cdd:PRK06065 81 rKPVsrvYVGGATGVMTA----IAGWYHVASGLCQKVLAvaeekmsparphpqavFRYIWDPILEKPLNPNLI------- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 312 dswqWPFgatsaahtlALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVP 391
Cdd:PRK06065 150 ----WIF---------AMEMHRYMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPV 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 392 CDGAIAVVVSAVDAARDLAKPPVLVEAVGtQIIERIDWDQSTLTHePQVLGQAAHVWTRTS--LRP-ADVDVAELYDGFT 468
Cdd:PRK06065 217 SDGAAAIVLASEDLARRYTDTPVWVEGVG-WTLDNTEWPNRDLAY-PRYVEFAARMAYKMAgiERPrKEIDVAEPYDPFD 294
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1942661812 469 MNCLSWIEALGFCGIGEAREFLDGGKnIARDGVLPLNTHGGQLSHGRTHGMGLLHEAVS---QLRGEAGERQVA 539
Cdd:PRK06065 295 YKELHHLEGLQLAKRGEAPKLLKEGV-FDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISiywQLKGTAGKMQVK 367
|
|
| PRK06059 |
PRK06059 |
lipid-transfer protein; Provisional |
180-551 |
1.10e-27 |
|
lipid-transfer protein; Provisional
Pssm-ID: 180373 [Multi-domain] Cd Length: 399 Bit Score: 115.25 E-value: 1.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 180 DKVALTGIGMSQIGR--RLMVpplSLTIDACEAAIADAGLTIADIDGLST-------YPGGGNLggfgeggvTSLEAALG 250
Cdd:PRK06059 4 EPVYILGAGMHPWGKwgRDFV---EYGVVAARAALADAGLDWRDVQLVVGadtirngYPGFVAG--------ATFAQALG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 251 irptWHNGGIETFGPG---GSVI--AAMLAVAGGLARHVLcfrtlweATFNELMKQGKIIPSMG-RTDSWQW----PFGA 320
Cdd:PRK06059 73 ----WNGAPVSSSYAAcasGSQAlqSARAQILAGLCDVAL-------VVGADTTPKGFFAPVGGeRPDDPDWlrfhLIGA 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 321 TSAAHtLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVV 400
Cdd:PRK06059 142 TNPVY-FALLARRRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIV 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 401 SAVDAARDLAKP---PVLVEAVGTQI---------IERIDWDQSTLTHEPQV-----LGQAAhvWTRTSLRPADVDVAEL 463
Cdd:PRK06059 221 ASKSFARRHLGSvagVPSVRAISTVTprypqhlpeLPDIATDSTAAVPAPERvfkdqILDAA--YAEAGIGPEDLSLAEV 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 464 YDGFTMNCLSWIEALGFCGIGEAREFLDGGKnIARDGVLPLNTHGGQLSHGR---THGMGLLHEAVSQLRGEAGERQVAD 540
Cdd:PRK06059 299 YDLSTALELDWYEHLGLCPKGEAEALLRSGA-TTLGGRIPVNPSGGLACFGEaipAQAIAQVCELTWQLRGQAGGRQVEG 377
|
410
....*....|.
gi 1942661812 541 ARVGVVSSGGL 551
Cdd:PRK06059 378 ARVGITANQGL 388
|
|
| PRK08256 |
PRK08256 |
lipid-transfer protein; Provisional |
334-551 |
2.16e-25 |
|
lipid-transfer protein; Provisional
Pssm-ID: 181327 [Multi-domain] Cd Length: 391 Bit Score: 108.06 E-value: 2.16e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 334 HFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAAR--DLAK 411
Cdd:PRK08256 156 HMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARkhGLDR 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 412 PPVLV-EAVGTQIIEriDWDQSTLthePQVLG------QAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIG 484
Cdd:PRK08256 236 AVEIVaQAMTTDTPS--TFDGRSM---IDLVGydmtraAAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEG 310
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1942661812 485 EAREFLDGGKNiARDGVLPLNTHGGQLSHGrtH-----GMGLLHEAVSQLRGEAGERQVADARVGVVSSGGL 551
Cdd:PRK08256 311 EAEKFIDDGDN-TYGGRWVVNPSGGLLSKG--HplgatGLAQCAELTWQLRGTAGARQVEGARLALQHNLGL 379
|
|
| PRK06365 |
PRK06365 |
thiolase domain-containing protein; |
203-548 |
3.81e-24 |
|
thiolase domain-containing protein;
Pssm-ID: 235785 [Multi-domain] Cd Length: 430 Bit Score: 104.99 E-value: 3.81e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 203 LTIDACEAAIADAGLTIADIDG-LSTYPGGGNLGGFGEGGVtsLEAALGIRPTwHNGGIETFGP-GGSVI-AAMLAVAGG 279
Cdd:PRK06365 40 RVKKAFDYAMNDAGLTLADIDGsVASYFSDHFQRQLLAGIM--VQDYLGLVPK-PSKRIEGGGAtGGLAFqAGYEEIASG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 280 LARHVLCFRtlWEATFNELMKQGKIIPSMGRTDSWQWPFGATSAAHtLALNAQRHFHRYGTTKETLGWIALNQRANAELN 359
Cdd:PRK06365 117 RMDCVAVYG--FETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGY-YAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 360 PTAvyRSPM--TMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGT-----QIIERIDWDQS 432
Cdd:PRK06365 194 PFA--QSPMkiTVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGTgsdtlRLADRPFGEVP 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 433 TLTHE----------PQVLG------QAAHVWTRTSLRPA--DVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGK 494
Cdd:PRK06365 272 LLPNEspddykdlryPGVHSfragrmAAKEAYEMAGITDPlnDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGK 351
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1942661812 495 NiARDGVLPLNTHGGQLSHGRTHGMGLLHEAVS---QLRGEAGER------QVADARVGVVSS 548
Cdd:PRK06365 352 P-ELPGKLPVNPSGGLLAAGHAVGATGIMQAVFmfwQLQGRIKKHfhddylQVKNAKRGLIHS 413
|
|
| PRK06066 |
PRK06066 |
thiolase domain-containing protein; |
293-548 |
1.28e-23 |
|
thiolase domain-containing protein;
Pssm-ID: 180380 [Multi-domain] Cd Length: 385 Bit Score: 102.91 E-value: 1.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 293 ATFNELMKqgkiipsMGRTDSWQWPFGATSAAHTLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDD 372
Cdd:PRK06066 119 LTFSDVVK-------FAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLED 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 373 YLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGtqiieridWDQSTLTHEPQVLGQAAHVWTRTS 452
Cdd:PRK06066 192 VLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIG--------WSTESSNLETAELGKANYMRIAAD 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 453 L--------RPA-DVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGkNIARDGVLPLNTHGGQLSHGR---THGMG 520
Cdd:PRK06066 264 MaykmagieSPRkEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREG-NFDPQGELPVNPSGGHLAKGVpleASGLS 342
|
250 260
....*....|....*....|....*...
gi 1942661812 521 LLHEAVSQLRGEAGERQVaDARVGVVSS 548
Cdd:PRK06066 343 LLLDAVEYLRGEAGARQG-KAERAVVAS 369
|
|
| nondecarbox_cond_enzymes |
cd00826 |
nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic ... |
268-559 |
3.73e-17 |
|
nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Pssm-ID: 238422 [Multi-domain] Cd Length: 393 Bit Score: 83.70 E-value: 3.73e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 268 SVIAAMLAVAGGLARHVLC--FRTLwEATFNELMKQGKIIPSMGRTDSWQWPFgatsAAHTLALNAQRHFHRYGTTKE-- 343
Cdd:cd00826 91 ALALAMQLIAGGDANCILAggFEKM-ETSAENNAKEKHIDVLINKYGMRACPD----AFALAGQAGAEAAEKDGRFKDef 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 344 -TLGWIALNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAKPPVLVEAVGTQ 422
Cdd:cd00826 166 aKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQ 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 423 IIERI-DWdqSTLTHEPQVLGQ---------AAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDG 492
Cdd:cd00826 246 ALEMItDM--ASTFEDKKVIKMvggdgpieaARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDR 323
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 493 GKNiARDGVLPLNTHGGQLSHGR---THGMGLLHEAVSQLRGEAGERQVADARVGVVSSGGLTPSGVLLL 559
Cdd:cd00826 324 GDN-TYGGKSIINPNGGAIAIGHpigASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
|
|
| PRK08313 |
PRK08313 |
thiolase domain-containing protein; |
182-542 |
9.56e-17 |
|
thiolase domain-containing protein;
Pssm-ID: 181378 [Multi-domain] Cd Length: 386 Bit Score: 82.09 E-value: 9.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 182 VALTGIGMSQ-IGRRLMVPPLSLTIDACEAAIADAGLTIADIDG--LSTYPGGGNLGGFGEGGVTSLEAALG---IRPtw 255
Cdd:PRK08313 5 AAVLGTGQTKyVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAvvVGKAPDFFEGVMMPELFLADALGATGkplIRV-- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 256 HNGGieTFGPGGSVIAAMLaVAGGLARHVLCFRtlWEATFNELMKQGKIIPSmgrtdSWQWPFGATSAAHtLALNAQRHF 335
Cdd:PRK08313 83 HTAG--SVGGSTAVVAASL-VQSGVYRRVLAVA--WEKQSESNAMWALSIPV-----PFTKPVGAGAGGY-FAPHVRAYI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 336 HRYGTTKETLGWIALNQRANAELNPTAVYRSP-MTMDDYLNARPITTPFgLYDCDVPC-DGAIAVVVSAVDAARDLA-KP 412
Cdd:PRK08313 152 RRSGAPEHIGAMVAVKDRLNGAKNPYAHLHQPdITLEKVMASQMLWDPI-RFDETCPSsDGACAVVIGDEEAADAAAgRP 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 413 PVLVEAVGTQIieridwDQSTLTHEPQVLGQ-----AAHVWTRTSLR-PAD-VDVAELYDGFTMNCLSWIEALGFCGIGE 485
Cdd:PRK08313 231 VAWIHGTAMRT------EPLAFAGRDQVNPQagrdaAAALWKAAGITdPRDeIDVAEIYVPFSWFEPMWLENLGFAPEGE 304
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1942661812 486 AREFLDGGKNiARDGVLPLNTHGGQLSHGRTHGMGLLH--EAVSQLRGEAGERQVADAR 542
Cdd:PRK08313 305 GWKLTEAGET-AIGGRLPVNPSGGVLSSNPIGASGMIRfaEAALQVMGKAGEHQVDGAR 362
|
|
| OB_aCoA_assoc |
pfam01796 |
DUF35 OB-fold domain, acyl-CoA-associated; The structure of a DUF35 representative reveals two ... |
70-134 |
8.98e-14 |
|
DUF35 OB-fold domain, acyl-CoA-associated; The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin-like zinc ribbon domain and a C-terminal OB fold domain represented in this entry. OB-folds are frequently found to bind nucleic acids suggesting this domain might bind to DNA or RNA (Topsan http://www.topsan.org/). Genomic context shows it to be adjacent to acyl-CoA transferase (http:/www.microbesonline.org/).
Pssm-ID: 460333 Cd Length: 65 Bit Score: 66.09 E-value: 8.98e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1942661812 70 RDVSGKATLAGFTVNHR-FSVPGMPAPYVIAQVAIAEDPRVrlTTNIVDCDPDQLELGQQVEVVFE 134
Cdd:pfam01796 2 VELSGRGTVYSYTVVHRpPPGFADDVPYVVGLVELDEGPRV--MARLVGVDPDEVRIGMRVRAVFR 65
|
|
| PRK06289 |
PRK06289 |
acetyl-CoA acetyltransferase; Provisional |
337-556 |
2.96e-13 |
|
acetyl-CoA acetyltransferase; Provisional
Pssm-ID: 235771 [Multi-domain] Cd Length: 403 Bit Score: 71.64 E-value: 2.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 337 RYGTTKETLGWIALNQRANAELNPTAVYRS-----PMTMDDYLNARPITTPFGLYDCDVPCDGAIAVVVSAVDAARDLAK 411
Cdd:PRK06289 163 RYGLDEEHLRAIAEINFANARRNPNAQTRGwafpdEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYAD 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 412 PPVLVEAVG----------TQIIERIDWDQSTLthePQVLGQAAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFC 481
Cdd:PRK06289 243 ARPIPRIKGwghrtaplglEQKLDRSAGDPYVL---PHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLT 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1942661812 482 GIGEAREFLDGGkNIARDGVLPLNTHGGQLSHGR---THGMGLLHEAVSQLRGEAGERQVADAR-VGVVSSGGLTPSGV 556
Cdd:PRK06289 320 GPGESWKAIENG-EIAIGGRLPINPSGGLIGGGHpvgASGVRMLLDAAKQVTGTAGDYQVEGAKtFGTLNIGGSTTTTV 397
|
|
| PRK07516 |
PRK07516 |
thiolase domain-containing protein; |
180-546 |
2.53e-10 |
|
thiolase domain-containing protein;
Pssm-ID: 181013 [Multi-domain] Cd Length: 389 Bit Score: 62.27 E-value: 2.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 180 DKVALTGIGMSQIGRRLMVPPLSLTIDACEAAIADAGLTIADIDG--LSTYPGGGNLGGFGEGGVTSLEAALGIRPTWHn 257
Cdd:PRK07516 2 MTASIVGWAHTPFGKLDAETLESLIVRVAREALAHAGIAAGDVDGifLGHFNAGFSPQDFPASLVLQADPALRFKPATR- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 258 ggIETFGPGGS--VIAAMLAVAGGLARHVLCF--------------RTLWEATFnelMKQGKIIPsmgrtdswqwpfgaT 321
Cdd:PRK07516 81 --VENACATGSaaVYAALDAIEAGRARIVLVVgaekmtatptaevgDILLGASY---LKEEGDTP--------------G 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 322 SAAHTLALNAQRHFHRYGTTKETLGWIALNQRANAELNPTAVYRSPMTMDDYLNARP----ITTPFGLYDCDVPCDGAIA 397
Cdd:PRK07516 142 GFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEknplVAGPLRRTDCSLVSDGAAA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 398 VVVSAVDAARDLAKPPVLVEAVGTQII---ERIDwdqsTLTHE-PQVLGQAAHVWTRTSLrpADVDVAELYDGFTMNCLS 473
Cdd:PRK07516 222 LVLADAETARALQRAVRFRARAHVNDFlplSRRD----PLAFEgPRRAWQRALAQAGVTL--DDLSFVETHDCFTIAELI 295
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1942661812 474 WIEALGFCGIGEAREFLDGGKnIARDGVLPLNTHGGQLSHGRTHG-----MGLLheAVSQLRGEAGERQVADARVGVV 546
Cdd:PRK07516 296 EYEAMGLAPPGQGARAIREGW-TAKDGKLPVNPSGGLKAKGHPIGatgvsMHVL--AAMQLTGEAGGMQIPGAKLAGV 370
|
|
| PTZ00455 |
PTZ00455 |
3-ketoacyl-CoA thiolase; Provisional |
444-538 |
5.13e-08 |
|
3-ketoacyl-CoA thiolase; Provisional
Pssm-ID: 240424 [Multi-domain] Cd Length: 438 Bit Score: 55.28 E-value: 5.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1942661812 444 AAHVWTRTSLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAREFLDGGkNIARDGVLPLNTHGGQLSHGR---THGMG 520
Cdd:PTZ00455 315 AQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNG-ATALEGRIPVNTGGGLLSFGHpvgATGVK 393
|
90
....*....|....*...
gi 1942661812 521 LLHEAVSQLRGEAGERQV 538
Cdd:PTZ00455 394 QIMEVYRQMKGQCGEYQM 411
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| DUF35_N |
pfam12172 |
Rubredoxin-like zinc ribbon domain (DUF35_N); This domain has no known function and is found ... |
32-66 |
5.43e-08 |
|
Rubredoxin-like zinc ribbon domain (DUF35_N); This domain has no known function and is found in conserved hypothetical archaeal and bacterial proteins. The domain is duplicated in Swiss:O53566. The structure of a DUF35 representative reveals two long N-terminal helices followed by a rubredoxin-like zinc ribbon domain represented in this family and a C-terminal OB fold domain. Zinc is chelated by the four conserved cysteines in the alignment.
Pssm-ID: 463482 Cd Length: 37 Bit Score: 48.86 E-value: 5.43e-08
10 20 30
....*....|....*....|....*....|....*
gi 1942661812 32 WKAGADGTLRFQECQACQALIHPPAPVCRYCRSRD 66
Cdd:pfam12172 1 WEALAEGRLVGQRCPDCGTVRFPPRAVCPHCGSRD 35
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