NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1798203385|ref|WP_159438013|]
View 

DUF4358 domain-containing protein [Negativibacillus massiliensis]

Protein Classification

DUF4358 domain-containing protein( domain architecture ID 10625955)

DUF4358 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4358 pfam14270
Domain of unknown function (DUF4358); This domain family is found in bacteria, and is ...
 46-142 4.99e-23

Domain of unknown function (DUF4358); This domain family is found in bacteria, and is approximately 110 amino acids in length.


:

Pssm-ID: 433825  Cd Length: 97  Bit Score: 86.90  E-value: 4.99e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798203385  46 SNMQKQGEAALNNYYYIDPTTLENYAIYMSDYATgNADEIAMFQVKEEDQVAAVKALINDRITDLKVRYEDYKPEEMSKI 125
Cdd:pfam14270   2 DDMKELDEDDLKKLYGIDPDDVEDFVLYVSASSA-SADEILIVKAKDEDDAEEVKDALEKRLEDQKKSFEDYLPDEYKKL 80

                          90
                  ....*....|....*..
gi 1798203385 126 DSAVIVDDGCYIFVVIS 142
Cdd:pfam14270  81 ENAVVKTKGNYVFFVVS 97
 
Name Accession Description Interval E-value
DUF4358 pfam14270
Domain of unknown function (DUF4358); This domain family is found in bacteria, and is ...
 46-142 4.99e-23

Domain of unknown function (DUF4358); This domain family is found in bacteria, and is approximately 110 amino acids in length.


Pssm-ID: 433825  Cd Length: 97  Bit Score: 86.90  E-value: 4.99e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798203385  46 SNMQKQGEAALNNYYYIDPTTLENYAIYMSDYATgNADEIAMFQVKEEDQVAAVKALINDRITDLKVRYEDYKPEEMSKI 125
Cdd:pfam14270   2 DDMKELDEDDLKKLYGIDPDDVEDFVLYVSASSA-SADEILIVKAKDEDDAEEVKDALEKRLEDQKKSFEDYLPDEYKKL 80

                          90
                  ....*....|....*..
gi 1798203385 126 DSAVIVDDGCYIFVVIS 142
Cdd:pfam14270  81 ENAVVKTKGNYVFFVVS 97
 
Name Accession Description Interval E-value
DUF4358 pfam14270
Domain of unknown function (DUF4358); This domain family is found in bacteria, and is ...
 46-142 4.99e-23

Domain of unknown function (DUF4358); This domain family is found in bacteria, and is approximately 110 amino acids in length.


Pssm-ID: 433825  Cd Length: 97  Bit Score: 86.90  E-value: 4.99e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798203385  46 SNMQKQGEAALNNYYYIDPTTLENYAIYMSDYATgNADEIAMFQVKEEDQVAAVKALINDRITDLKVRYEDYKPEEMSKI 125
Cdd:pfam14270   2 DDMKELDEDDLKKLYGIDPDDVEDFVLYVSASSA-SADEILIVKAKDEDDAEEVKDALEKRLEDQKKSFEDYLPDEYKKL 80

                          90
                  ....*....|....*..
gi 1798203385 126 DSAVIVDDGCYIFVVIS 142
Cdd:pfam14270  81 ENAVVKTKGNYVFFVVS 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH