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Conserved domains on  [gi|1469248881|ref|WP_117616436|]
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MULTISPECIES: DUF4288 domain-containing protein [Bacillus]

Protein Classification

DUF4288 domain-containing protein( domain architecture ID 10624335)

DUF4288 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4288 pfam14119
Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. ...
 2-97 3.73e-22

Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


:

Pssm-ID: 379479  Cd Length: 84  Bit Score: 83.09  E-value: 3.73e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469248881   2 YAVKLLFESVHSGEpdptkmdeyyeeNHDTLFEESIILVKANSLEEAHKLGEKIAIQSKDTYNNMYDEQVTWTFRKVLHV 81
Cdd:pfam14119   2 YVAKLVYEIISEGG------------DHQPQFEEQLVLVRADSEEEAYEKAEKYGKEEEEPYRNEYGQTVTWTFIGVIDV 69

                          90
                  ....*....|....*.
gi 1469248881  82 FELDDTpFETGKELYA 97
Cdd:pfam14119  70 FEIYDE-LDDGSELYS 84
 
Name Accession Description Interval E-value
DUF4288 pfam14119
Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. ...
 2-97 3.73e-22

Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 379479  Cd Length: 84  Bit Score: 83.09  E-value: 3.73e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469248881   2 YAVKLLFESVHSGEpdptkmdeyyeeNHDTLFEESIILVKANSLEEAHKLGEKIAIQSKDTYNNMYDEQVTWTFRKVLHV 81
Cdd:pfam14119   2 YVAKLVYEIISEGG------------DHQPQFEEQLVLVRADSEEEAYEKAEKYGKEEEEPYRNEYGQTVTWTFIGVIDV 69

                          90
                  ....*....|....*.
gi 1469248881  82 FELDDTpFETGKELYA 97
Cdd:pfam14119  70 FEIYDE-LDDGSELYS 84
 
Name Accession Description Interval E-value
DUF4288 pfam14119
Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. ...
 2-97 3.73e-22

Domain of unknown function (DUF4288); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length.


Pssm-ID: 379479  Cd Length: 84  Bit Score: 83.09  E-value: 3.73e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469248881   2 YAVKLLFESVHSGEpdptkmdeyyeeNHDTLFEESIILVKANSLEEAHKLGEKIAIQSKDTYNNMYDEQVTWTFRKVLHV 81
Cdd:pfam14119   2 YVAKLVYEIISEGG------------DHQPQFEEQLVLVRADSEEEAYEKAEKYGKEEEEPYRNEYGQTVTWTFIGVIDV 69

                          90
                  ....*....|....*.
gi 1469248881  82 FELDDTpFETGKELYA 97
Cdd:pfam14119  70 FEIYDE-LDDGSELYS 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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