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Conserved domains on  [gi|881052904|ref|WP_048771019|]
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septum formation family protein [Cellulomonas flavigena]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Septum_form super family cl16434
Septum formation; This domain is found in a protein which is predicted to play a role in ...
 33-124 4.38e-08

Septum formation; This domain is found in a protein which is predicted to play a role in septum formation during cell division.


The actual alignment was detected with superfamily member pfam13845:

Pssm-ID: 433522  Cd Length: 227  Bit Score: 50.05  E-value: 4.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881052904   33 VGQCVMLPAEATATTIETTGCAREHDAEVFYVTSAPD---GDFPGADALNKQAESECISAFGDYVGS-DYL-TSSLDATW 107
Cdd:pfam13845 131 PGTCLGIDLDGAVPVMDPVDCAEPHAAEVVGVVDLPDrfpGAYPSLEDQDDFLDDACTRAAADYLGGpDDLrYRTLTVFW 210

                          90
                  ....*....|....*..
gi 881052904  108 MIPTKDSWAQKDRLIVC 124
Cdd:pfam13845 211 DTLSAESWLAGSRGVNC 227
 
Name Accession Description Interval E-value
Septum_form pfam13845
Septum formation; This domain is found in a protein which is predicted to play a role in ...
 33-124 4.38e-08

Septum formation; This domain is found in a protein which is predicted to play a role in septum formation during cell division.


Pssm-ID: 433522  Cd Length: 227  Bit Score: 50.05  E-value: 4.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881052904   33 VGQCVMLPAEATATTIETTGCAREHDAEVFYVTSAPD---GDFPGADALNKQAESECISAFGDYVGS-DYL-TSSLDATW 107
Cdd:pfam13845 131 PGTCLGIDLDGAVPVMDPVDCAEPHAAEVVGVVDLPDrfpGAYPSLEDQDDFLDDACTRAAADYLGGpDDLrYRTLTVFW 210

                          90
                  ....*....|....*..
gi 881052904  108 MIPTKDSWAQKDRLIVC 124
Cdd:pfam13845 211 DTLSAESWLAGSRGVNC 227
 
Name Accession Description Interval E-value
Septum_form pfam13845
Septum formation; This domain is found in a protein which is predicted to play a role in ...
 33-124 4.38e-08

Septum formation; This domain is found in a protein which is predicted to play a role in septum formation during cell division.


Pssm-ID: 433522  Cd Length: 227  Bit Score: 50.05  E-value: 4.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881052904   33 VGQCVMLPAEATATTIETTGCAREHDAEVFYVTSAPD---GDFPGADALNKQAESECISAFGDYVGS-DYL-TSSLDATW 107
Cdd:pfam13845 131 PGTCLGIDLDGAVPVMDPVDCAEPHAAEVVGVVDLPDrfpGAYPSLEDQDDFLDDACTRAAADYLGGpDDLrYRTLTVFW 210

                          90
                  ....*....|....*..
gi 881052904  108 MIPTKDSWAQKDRLIVC 124
Cdd:pfam13845 211 DTLSAESWLAGSRGVNC 227
Septum_form pfam13845
Septum formation; This domain is found in a protein which is predicted to play a role in ...
 34-124 4.70e-05

Septum formation; This domain is found in a protein which is predicted to play a role in septum formation during cell division.


Pssm-ID: 433522  Cd Length: 227  Bit Score: 41.58  E-value: 4.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 881052904   34 GQCVMLPAEATATTIETTGCAREHDAEVF-------YVTSA--PDGDFPGADALNKQAESECISAFGDYVGSDY-----L 99
Cdd:pfam13845   2 GDCLTWDATPDASDYEPVDCAEPHRFEVVaredlgtYPGSEfgPGAPPPDGSRWAQLAEELCEQATAEYLGGRLdpagrF 81

                          90       100
                  ....*....|....*....|....*
gi 881052904  100 TSSLdatwMIPTKDSWAQKDRLIVC 124
Cdd:pfam13845  82 SVGV----LLPSEAAWAAGDRTLRC 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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