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Conserved domains on  [gi|755617655|ref|WP_042535684|]
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MULTISPECIES: ATP synthase F1 subunit gamma [Oceanobacillus]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-285 1.38e-153

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 429.92  E-value: 1.38e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNtDLQHPMLTKREVKKTGYLI 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHAA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQAA 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 755617655 241 SMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK05621 240 RMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-285 1.38e-153

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 429.92  E-value: 1.38e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNtDLQHPMLTKREVKKTGYLI 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHAA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQAA 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 755617655 241 SMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK05621 240 RMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-285 5.14e-150

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 421.09  E-value: 5.14e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLI 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSA---SASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASE 237
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAeweTRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 755617655 238 HAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-284 1.03e-138

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 392.27  E-value: 1.03e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655    3 SLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLIIT 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   83 SDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGM-SDHPSFADVKDLASEAVQMYA 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  162 DEEIDELHIIYNHYVSAISQVVTNKQLLPIE--NIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHA 239
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLDpeEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 755617655  240 ASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAA 284
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-285 8.89e-129

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 367.39  E-value: 8.89e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655    2 ASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLII 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   82 TSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMYA 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  162 DEEIDELHIIYNHYVSAISQVVTNKQLLPI--ENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHA 239
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLsaQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 755617655  240 ASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-281 5.67e-120

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 344.95  E-value: 5.67e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   2 ASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLII 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  82 TSDRGLVGAYNSHILKNLINKIEQNHSSKDEytLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMYA 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKEADGKEVK--LIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 162 DEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASA---SDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEH 238
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEgsrSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 755617655 239 AASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGG 281
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-285 1.38e-153

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 429.92  E-value: 1.38e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNtDLQHPMLTKREVKKTGYLI 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHAA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQAA 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 755617655 241 SMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK05621 240 RMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-285 5.14e-150

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 421.09  E-value: 5.14e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLI 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSA---SASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASE 237
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAeweTRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 755617655 238 HAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-284 1.03e-138

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 392.27  E-value: 1.03e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655    3 SLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLIIT 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   83 SDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGM-SDHPSFADVKDLASEAVQMYA 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSlGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  162 DEEIDELHIIYNHYVSAISQVVTNKQLLPIE--NIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHA 239
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLDpeEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 755617655  240 ASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAA 284
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-285 8.89e-129

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 367.39  E-value: 8.89e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655    2 ASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLII 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   82 TSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMYA 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  162 DEEIDELHIIYNHYVSAISQVVTNKQLLPI--ENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHA 239
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLsaQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 755617655  240 ASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-281 5.67e-120

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 344.95  E-value: 5.67e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   2 ASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLII 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  82 TSDRGLVGAYNSHILKNLINKIEQNHSSKDEytLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMYA 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKEADGKEVK--LIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 162 DEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASA---SDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEH 238
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEgsrSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 755617655 239 AASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGG 281
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSG 281
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-285 4.38e-104

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 304.67  E-value: 4.38e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLI 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQMY 160
Cdd:PRK13423  81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEGY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 161 ADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIE-EQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASEHA 239
Cdd:PRK13423 161 LAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEaADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEHG 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 755617655 240 ASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK13423 241 ARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-286 5.17e-91

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 271.67  E-value: 5.17e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIA--NSNTDLQHPMLTKRE-VKKTG 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTarTVGAARVGPLLEKRPtVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  78 YLIITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAV 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 158 QMYADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKASE 237
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVLESIASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 755617655 238 HAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAALE 286
Cdd:PRK14111 241 HSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALG 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-286 1.08e-78

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 240.42  E-value: 1.08e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKT-GYL 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREEIKTcGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  80 IITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQM 159
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVIDG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 160 YADEEIDELHIIYNHYVSAISQVVTNKQLLPI---ENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKAS 236
Cdd:PRK13424 161 YLTGELDEVVLVYGEFVSMARQLPITLQILPIapeEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTSAS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 755617655 237 EHAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAALE 286
Cdd:PRK13424 241 EHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALK 290
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-285 1.09e-77

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 237.75  E-value: 1.09e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLI 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHS-SKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQM 159
Cdd:PRK13426  81 FSSNTSLCGGFNANIIKLLLQTIGEYRTlGQDNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLMEL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 160 YADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSAS-----ASDYEFDPNQEEILEVLLPQYAESLIFGALLDGK 234
Cdd:PRK13426 161 FLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEhaggvANDYIIEPSADTVLNDLIPKLLSLKIYTALLDSN 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 755617655 235 ASEHAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK13426 241 ASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-286 2.62e-77

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 236.63  E-value: 2.62e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKR-EVKKTGYL 79
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRsEVNKVLVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  80 IITSDRGLVGAYNSHILKNLINKIEQNH---SSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEA 156
Cdd:PRK13425  81 LITSDRGLCGAFNTNIIKLAQKVIHEDYaalHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAETA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 157 VQMYADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEFDPNQEEILEVLLPQYAESLIFGALLDGKAS 236
Cdd:PRK13425 161 SGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLESNAA 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 755617655 237 EHAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAALE 286
Cdd:PRK13425 241 EQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQ 290
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-286 2.65e-71

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 221.35  E-value: 2.65e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKRE-VKKTGYL 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEkIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  80 IITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQM 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 160 YADEEIDELHIIYNHYVSAISQVVTNKQLLPIENIEEQSASASDYEF--DPNQEEILEVLLPQYAESLIFGALLDGKASE 237
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVvyEPSPEAILESLLPLVVKTAFLKAILEANASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 755617655 238 HAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAALE 286
Cdd:PRK13427 241 QIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-286 8.29e-60

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 191.91  E-value: 8.29e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASL--RDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGY 78
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  79 LIITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGM-SDHPSFADVKDLASEAV 157
Cdd:PRK14110  81 VIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVfRKEINFSVVKEVGGILA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 158 QMYADEEIDELHIIYNHYVSAISQVVTNKQLLPIEnIEEQSASASD---YEFDPNQEEILEVLLPQYAESLIFGALLDGK 234
Cdd:PRK14110 161 SRYIEEETDAVYLINNEMITRATYKPKVRKFLPFE-VEAQEKKLDElsvYNIEVSEEEFLDKLLQLYLNYQLYRALVESN 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755617655 235 ASEHAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAALE 286
Cdd:PRK14110 240 AAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-285 4.81e-49

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 164.45  E-value: 4.81e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655   1 MASLRDLKGRIDSTKKTKQITGAMELVSASKMSKAEQNARGFVPYAEKLQEVVSSIANSNTDLQHPMLTKREVKKTGYLI 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655  81 ITSDRGLVGAYNSHILKNLINKIEQNHSSKDEYTLIVIGRKGYDFCRKRGLPVAQSILGMSDHPSFADVKDLASEAVQM- 159
Cdd:PRK13422  81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDVNIVATAHYNDKDKEGSIRAIGGAVKVMl 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755617655 160 --YADEEIDELHIIYNHYVSAISQVVTNKQLLPIENI----------EEQSASASDYEFDPNQEEILEVLLPQYAESLIF 227
Cdd:PRK13422 161 dkFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIfsaeeikankEKATKGHWDYIYERDIEEVLNALCIRYIEAQVR 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 755617655 228 GALLDGKASEHAASMTAMRSATDNANELIGDLELSYNRARQAAITQEITEIVGGVAAL 285
Cdd:PRK13422 241 GAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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