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Conserved domains on  [gi|740829122|ref|WP_038614405|]
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glycosyltransferase family 8 protein [Rhizobium leguminosarum]

Protein Classification

glycosyltransferase family 8 protein( domain architecture ID 11444513)

glycosyltransferase family 8 protein catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds; similar to Escherichia coli lipopolysaccharide 1,2-glucosyltransferase, which adds the glucose(II) group on the galactose(I) group of LPS

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
32-317 4.28e-70

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 220.23  E-value: 4.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  32 AVIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPD-TALQARGRWSGA 110
Cdd:COG1442    7 NIVFAIDDNYLPGLGVSIASLLENNPDRPYDFHILTDGLSDENKERLEALAAKYNVSIEFIDVDDELlKDLPVSKHISKA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 111 TLARLYMDLHIPDHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYVMAFPEKAgaRQRKIGMREGGRYFNAGVLL 190
Cdd:COG1442   87 TYYRLLIPELLPDDYDKVLYLDADTLVLGDLSELWDIDLGGNLLAAVRDGTVTGSQKK--RAKRLGLPDDDGYFNSGVLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 191 FDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLLPFVG-------------RPAIIHF 257
Cdd:COG1442  165 INLKKWREENITEKALEFLKENPDKLKYPDQDILNIVLGGKVKFLPPRYNYQYSLYYELKdksnkkellearkNPVIIHY 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 258 TGRKKPWQAtvpWVHRRMANRYAEDLANTPWASFCRQPSMTGRIAAFLSHLGKRIGGLAR 317
Cdd:COG1442  245 TGPTKPWHK---WCTHPYADLYWEYLKKTPWKDIPLKKALRYKQLRKKAKHLRYLKGIKN 301
 
Name Accession Description Interval E-value
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
32-317 4.28e-70

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 220.23  E-value: 4.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  32 AVIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPD-TALQARGRWSGA 110
Cdd:COG1442    7 NIVFAIDDNYLPGLGVSIASLLENNPDRPYDFHILTDGLSDENKERLEALAAKYNVSIEFIDVDDELlKDLPVSKHISKA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 111 TLARLYMDLHIPDHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYVMAFPEKAgaRQRKIGMREGGRYFNAGVLL 190
Cdd:COG1442   87 TYYRLLIPELLPDDYDKVLYLDADTLVLGDLSELWDIDLGGNLLAAVRDGTVTGSQKK--RAKRLGLPDDDGYFNSGVLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 191 FDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLLPFVG-------------RPAIIHF 257
Cdd:COG1442  165 INLKKWREENITEKALEFLKENPDKLKYPDQDILNIVLGGKVKFLPPRYNYQYSLYYELKdksnkkellearkNPVIIHY 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 258 TGRKKPWQAtvpWVHRRMANRYAEDLANTPWASFCRQPSMTGRIAAFLSHLGKRIGGLAR 317
Cdd:COG1442  245 TGPTKPWHK---WCTHPYADLYWEYLKKTPWKDIPLKKALRYKQLRKKAKHLRYLKGIKN 301
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
32-265 1.07e-67

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 212.07  E-value: 1.07e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  32 AVIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPDT--ALQARGRWSG 109
Cdd:cd04194    2 NIVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFkfFPATTDHISY 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 110 ATLARLYMDLHIPdHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYVMAFPEKagaRQRKIGMREGGRYFNAGVL 189
Cdd:cd04194   82 ATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK---RKRRLGGYDDGSYFNSGVL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 190 LFDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLLPF--------------VGRPAII 255
Cdd:cd04194  158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLlkkkskeeqeleeaRKNPVII 237
                        250
                 ....*....|
gi 740829122 256 HFTGRKKPWQ 265
Cdd:cd04194  238 HYTGSDKPWN 247
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
33-264 6.48e-33

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 122.43  E-value: 6.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122   33 VIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIA-------EVGNFARLHGMAIRVLPYNTPDTALQARG 105
Cdd:pfam01501   2 IALALDKNYLLGASVSIKSLLKNNSDFALNFHIFTDDIPVENLDilnwlasSYKPVLPLLESDIKIFEYFSKLKLRSPKY 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  106 rWSGATLARLYmdlhIPD---HVERLLYLDADVLAVAPVDDLFAMNLQGRALAAI-DDYVMAFPEKAgARQRKIGMREGG 181
Cdd:pfam01501  82 -WSLLNYLRLY----LPDlfpKLDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVeDNYFQRYPNFS-EPIILENFGPPA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  182 RYFNAGVLLFDWSACRSRGLFARTREIF--EERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLL--------PFVGR 251
Cdd:pfam01501 156 CYFNAGMLLFDLDAWRKENITERYIKWLnlNENRTLWKLGDQDPLNIVFYGKVKPLDPRWNVLGLGYynkkkslnEITEN 235
                         250
                  ....*....|...
gi 740829122  252 PAIIHFTGRKKPW 264
Cdd:pfam01501 236 AAVIHYNGPTKPW 248
PRK15171 PRK15171
lipopolysaccharide 3-alpha-galactosyltransferase;
107-288 6.59e-10

lipopolysaccharide 3-alpha-galactosyltransferase;


Pssm-ID: 185093 [Multi-domain]  Cd Length: 334  Bit Score: 59.38  E-value: 6.59e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 107 WSGATLARLYMDLHIPDHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAI--DDYVMAFPEKAGARQRKiGMREGgrYF 184
Cdd:PRK15171 103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVvaEGDAEWWSKRAQSLQTP-GLASG--YF 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 185 NAGVLLFD---WSA--CRSRGL-FARTREIFEERSHLfennDQDALNVTFDGDWLVLDPRWNTQTGL---------LPFV 249
Cdd:PRK15171 180 NSGFLLINipaWAQenISAKAIeMLADPEIVSRITHL----DQDVLNILLAGKVKFIDAKYNTQFSLnyelkdsviNPVN 255
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 740829122 250 GRPAIIHFTGRKKPWQAtvpWVHRRMANRYAEDLANTPW 288
Cdd:PRK15171 256 DETVFIHYIGPTKPWHS---WADYPVSQYFLKAKEASPW 291
 
Name Accession Description Interval E-value
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
32-317 4.28e-70

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 220.23  E-value: 4.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  32 AVIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPD-TALQARGRWSGA 110
Cdd:COG1442    7 NIVFAIDDNYLPGLGVSIASLLENNPDRPYDFHILTDGLSDENKERLEALAAKYNVSIEFIDVDDELlKDLPVSKHISKA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 111 TLARLYMDLHIPDHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYVMAFPEKAgaRQRKIGMREGGRYFNAGVLL 190
Cdd:COG1442   87 TYYRLLIPELLPDDYDKVLYLDADTLVLGDLSELWDIDLGGNLLAAVRDGTVTGSQKK--RAKRLGLPDDDGYFNSGVLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 191 FDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLLPFVG-------------RPAIIHF 257
Cdd:COG1442  165 INLKKWREENITEKALEFLKENPDKLKYPDQDILNIVLGGKVKFLPPRYNYQYSLYYELKdksnkkellearkNPVIIHY 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 258 TGRKKPWQAtvpWVHRRMANRYAEDLANTPWASFCRQPSMTGRIAAFLSHLGKRIGGLAR 317
Cdd:COG1442  245 TGPTKPWHK---WCTHPYADLYWEYLKKTPWKDIPLKKALRYKQLRKKAKHLRYLKGIKN 301
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
32-265 1.07e-67

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 212.07  E-value: 1.07e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  32 AVIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPDT--ALQARGRWSG 109
Cdd:cd04194    2 NIVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFkfFPATTDHISY 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 110 ATLARLYMDLHIPdHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYVMAFPEKagaRQRKIGMREGGRYFNAGVL 189
Cdd:cd04194   82 ATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK---RKRRLGGYDDGSYFNSGVL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 190 LFDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLLPF--------------VGRPAII 255
Cdd:cd04194  158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLlkkkskeeqeleeaRKNPVII 237
                        250
                 ....*....|
gi 740829122 256 HFTGRKKPWQ 265
Cdd:cd04194  238 HYTGSDKPWN 247
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
33-264 6.48e-33

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 122.43  E-value: 6.48e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122   33 VIVCSDVNMLPAACCTLLSVKRNLSGSSVEFLLLGIDLKPNEIA-------EVGNFARLHGMAIRVLPYNTPDTALQARG 105
Cdd:pfam01501   2 IALALDKNYLLGASVSIKSLLKNNSDFALNFHIFTDDIPVENLDilnwlasSYKPVLPLLESDIKIFEYFSKLKLRSPKY 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  106 rWSGATLARLYmdlhIPD---HVERLLYLDADVLAVAPVDDLFAMNLQGRALAAI-DDYVMAFPEKAgARQRKIGMREGG 181
Cdd:pfam01501  82 -WSLLNYLRLY----LPDlfpKLDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVeDNYFQRYPNFS-EPIILENFGPPA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  182 RYFNAGVLLFDWSACRSRGLFARTREIF--EERSHLFENNDQDALNVTFDGDWLVLDPRWNTQTGLL--------PFVGR 251
Cdd:pfam01501 156 CYFNAGMLLFDLDAWRKENITERYIKWLnlNENRTLWKLGDQDPLNIVFYGKVKPLDPRWNVLGLGYynkkkslnEITEN 235
                         250
                  ....*....|...
gi 740829122  252 PAIIHFTGRKKPW 264
Cdd:pfam01501 236 AAVIHYNGPTKPW 248
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
30-264 1.88e-29

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 112.92  E-value: 1.88e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  30 QSAVIVCSDVNMLPAACCTLLSVKRNlSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTPD---TALQARGR 106
Cdd:cd00505    1 IAIVIVATGDEYLRGAIVLMKSVLRH-RTKPLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDsvdSEHLKRPI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 107 WsGATLARLYMDLHIPdHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYvmAFPEKAGARQRKIGMREGGRYFNA 186
Cdd:cd00505   80 K-IVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDP--GDRREGKYYRQKRSHLAGPDYFNS 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 187 GVLLFDWSACRSRGLFARTREIFEERSHLFENNDQDALNVTFDGDWL---VLDPRWNTQ-----TGLL---PFVGRPAII 255
Cdd:cd00505  156 GVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFivkSLPCIWNVRltgcyRSLNcfkAFVKNAKVI 235

                 ....*....
gi 740829122 256 HFTGRKKPW 264
Cdd:cd00505  236 HFNGPTKPW 244
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
126-270 8.16e-11

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 61.12  E-value: 8.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 126 ERLLYLDADVLAVAPVDDLFAMnlqgralaaiDDYVMAFPEKAGARqrkigmreggrYFNAGVLLFDWSACRSRGLfarT 205
Cdd:cd02537   91 DKVVFLDADTLVLRNIDELFDL----------PGEFAAAPDCGWPD-----------LFNSGVFVLKPSEETFNDL---L 146
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 740829122 206 REIFEERSHLFenNDQDALNVTFDGDWL---------VLDPRWNTQTGLLPFVGRPAIIHFTGRKKPWQATVPW 270
Cdd:cd02537  147 DALQDTPSFDG--GDQGLLNSYFSDRGIwkrlpftynALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWWRDP 218
PRK15171 PRK15171
lipopolysaccharide 3-alpha-galactosyltransferase;
107-288 6.59e-10

lipopolysaccharide 3-alpha-galactosyltransferase;


Pssm-ID: 185093 [Multi-domain]  Cd Length: 334  Bit Score: 59.38  E-value: 6.59e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 107 WSGATLARLYMDLHIPDHVERLLYLDADVLAVAPVDDLFAMNLQGRALAAI--DDYVMAFPEKAGARQRKiGMREGgrYF 184
Cdd:PRK15171 103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVvaEGDAEWWSKRAQSLQTP-GLASG--YF 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 185 NAGVLLFD---WSA--CRSRGL-FARTREIFEERSHLfennDQDALNVTFDGDWLVLDPRWNTQTGL---------LPFV 249
Cdd:PRK15171 180 NSGFLLINipaWAQenISAKAIeMLADPEIVSRITHL----DQDVLNILLAGKVKFIDAKYNTQFSLnyelkdsviNPVN 255
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 740829122 250 GRPAIIHFTGRKKPWQAtvpWVHRRMANRYAEDLANTPW 288
Cdd:PRK15171 256 DETVFIHYIGPTKPWHS---WADYPVSQYFLKAKEASPW 291
GT8_like_1 cd06429
GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of ...
111-264 8.54e-09

GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133051 [Multi-domain]  Cd Length: 257  Bit Score: 55.47  E-value: 8.54e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 111 TLARLYMDLHIPDhVERLLYLDADVLAVAPVDDLFAMNLQGRALAAIDDYvmafpekagarqrkigmreggryFNAGVLL 190
Cdd:cd06429  101 NFARFYLPELFPK-LEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVETS-----------------------WNPGVNV 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122 191 FDWSACRSRGLfarTREI------FEERSH-LFENNDQDALNVTFDGDWLVLDPRWNtQTGL-------LPFVGRPAIIH 256
Cdd:cd06429  157 VNLTEWRRQNV---TETYekwmelNQEEEVtLWKLITLPPGLIVFYGLTSPLDPSWH-VRGLgynygirPQDIKAAAVLH 232

                 ....*...
gi 740829122 257 FTGRKKPW 264
Cdd:cd06429  233 FNGNMKPW 240
GT8_HUGT1_C_like cd06432
The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family; C-terminal domain ...
49-155 1.96e-03

The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family; C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.


Pssm-ID: 133054  Cd Length: 248  Bit Score: 39.30  E-value: 1.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 740829122  49 LLSVKRNlSGSSVEFLLLGIDLKPNEIAEVGNFARLHGMAIRVLPYNTP-----DTALQaRGRWSGATLarlYMDLHIPD 123
Cdd:cd06432   20 MLSVMKN-TKSPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPrwlhkQTEKQ-RIIWGYKIL---FLDVLFPL 94
                         90       100       110
                 ....*....|....*....|....*....|..
gi 740829122 124 HVERLLYLDADVLAVAPVDDLFAMNLQGRALA 155
Cdd:cd06432   95 NVDKVIFVDADQIVRTDLKELMDMDLKGAPYG 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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