|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-480 |
1.69e-144 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 421.29 E-value: 1.69e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 112 LQAEADQILSQITEMGNGASFNGQAIFSPASENGTEDKKKRAVLDSLKAGWLSAAEDMVQQYYGLQGDGVTLKINLDTTD 191
Cdd:NF033876 1 LQKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLKSGWLENAEDLIKEYYGLTADGADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 192 GSSGVLASVT---GSTAPGSDVTLNIDMADFSDMSTPDGGSGPVYDDRVIAHEMVHAIMLRSTSFN-FPQWFTEGTAELI 267
Cdd:NF033876 81 GAGGTLAYVSsgsGGGGKGGNLTLTIDMADFSPANLPNGGTAPQYLDRTIAHEMVHAVMGRTMNFSsLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 268 HGADERLAGALAGGQTAQGIVDTI------TGGGFSYEAGYVASRYLHDKLKSMGvDGGMKGLMTYLSQHQSADLDTALD 341
Cdd:NF033876 161 HGADERLAADLAGGTSDAAGVAALfnggawTSTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKANAGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 342 AVTGGQYQGLGDFMTDFAAGGASFIAG-MDLTNADTGAIGGLDADGGPSRDAQGVVPESGFGTADRPLRNFKVEYPDIGG 420
Cdd:NF033876 240 AATGGAFATEADFLADFNANGAAFIKNyMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYPGEDPLSGFNVIWPTFSG 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 738284338 421 GAAlrhRVQIQVGASAGDLVDMEFAAVNSSALGLGGLDMRNTA-VALLHIDDALALVTEQR 480
Cdd:NF033876 320 AGT---TVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDAtSAIDIFDKALDYVSNQR 377
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
1-551 |
3.43e-39 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 149.45 E-value: 3.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK12806 1 MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSpasengtedkkkravldslka 160
Cdd:PRK12806 81 AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILD--------------------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 161 GWLSAAEDMVqqyyGLQGDGvTLKINLDTTDGSS-GVLASVTGSTAPGSDVTlnidmadfsDMSTPDGGSgpvyddrvia 239
Cdd:PRK12806 140 GSFSGASFQV----GANSNQ-TINFSIGSIKASSiGGIATATGTEVAGAAAT---------DITIAIGGG---------- 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 240 hemvhAIMLRSTSFNFPQWFTEGTAElihGADERLAGALAGGQTAQGIVDTITGGGFSYEAGYVASRYLHDKLKSMGVDG 319
Cdd:PRK12806 196 -----AATSINSSANFTGALNGQDAT---SAYAKAAAINDAGIGGLSVTASTSGTQAVGAIGGTAGDTYNLTINGVAIYT 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 320 GMkglmtylsQHQSADLDTAL-DAVTGGQYQglgdfmTDFAAGGASfiAGMDLTNADTGAIGGLDADGGPSRDAQGV-VP 397
Cdd:PRK12806 268 NL--------DVATALTNSDLrDAINGVSNQ------TGVVASLNG--GNMTLTAADGRNITVTESGTGFTAGTDGLtVT 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 398 ESGFGTADR-PLRNFKVEYPDIGGGAA-LRHRVQIQVGASAGDLVDMEFAAVNSSALGlggldmrntavallHIDDALAL 475
Cdd:PRK12806 332 GGAFDGALRgTLSISAVDTIAIGGTVAnIGLSANISKDTVGIDSLDVSTASGAQTAIK--------------RIDAALNS 397
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 738284338 476 VTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12806 398 VNSNRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
3-139 |
1.86e-36 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 135.76 E-value: 1.86e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 3 LSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTL 82
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 738284338 83 SSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFA 137
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
5-139 |
9.98e-29 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 110.90 E-value: 9.98e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 5 INNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSS 84
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 738284338 85 ITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLA 135
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-139 |
1.51e-27 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 112.28 E-value: 1.51e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK12802 1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK12802 81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLD 139
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
18-139 |
2.39e-24 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 103.58 E-value: 2.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 18 LAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLRELAV 97
Cdd:TIGR02550 15 ITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSSVGDVLQRARELAV 94
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 738284338 98 ASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:TIGR02550 95 QAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFS 136
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
428-551 |
2.32e-17 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 82.62 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 428 VQIQVGASAGDLVDMEF---AAVNSSALGLGGL----------DMRNTAVALLHIDDALALVTEQRVQVGAYSNRMDAAA 494
Cdd:PRK12802 145 MTFQVGANTGQSNQITFglsASFDATGLGVGSGtlitgadsaaAETNAQAAITAIDAALQTINTTRADLGAAQNRLQSTI 224
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 738284338 495 SNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12802 225 SNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 281
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
465-552 |
4.19e-17 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 81.06 E-value: 4.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 465 ALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEP 544
Cdd:COG1344 160 ALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLS 239
|
....*...
gi 738284338 545 raVLALLR 552
Cdd:COG1344 240 --LLDLLR 245
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
469-551 |
4.83e-16 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 73.13 E-value: 4.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 469 IDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVL 548
Cdd:pfam00700 4 IDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQSLL 83
|
...
gi 738284338 549 ALL 551
Cdd:pfam00700 84 NLL 86
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
469-539 |
4.19e-05 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 45.80 E-value: 4.19e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 738284338 469 IDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQ 539
Cdd:TIGR02550 226 LDKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAK 296
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-480 |
1.69e-144 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 421.29 E-value: 1.69e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 112 LQAEADQILSQITEMGNGASFNGQAIFSPASENGTEDKKKRAVLDSLKAGWLSAAEDMVQQYYGLQGDGVTLKINLDTTD 191
Cdd:NF033876 1 LQKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLKSGWLENAEDLIKEYYGLTADGADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 192 GSSGVLASVT---GSTAPGSDVTLNIDMADFSDMSTPDGGSGPVYDDRVIAHEMVHAIMLRSTSFN-FPQWFTEGTAELI 267
Cdd:NF033876 81 GAGGTLAYVSsgsGGGGKGGNLTLTIDMADFSPANLPNGGTAPQYLDRTIAHEMVHAVMGRTMNFSsLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 268 HGADERLAGALAGGQTAQGIVDTI------TGGGFSYEAGYVASRYLHDKLKSMGvDGGMKGLMTYLSQHQSADLDTALD 341
Cdd:NF033876 161 HGADERLAADLAGGTSDAAGVAALfnggawTSTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKANAGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 342 AVTGGQYQGLGDFMTDFAAGGASFIAG-MDLTNADTGAIGGLDADGGPSRDAQGVVPESGFGTADRPLRNFKVEYPDIGG 420
Cdd:NF033876 240 AATGGAFATEADFLADFNANGAAFIKNyMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYPGEDPLSGFNVIWPTFSG 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 738284338 421 GAAlrhRVQIQVGASAGDLVDMEFAAVNSSALGLGGLDMRNTA-VALLHIDDALALVTEQR 480
Cdd:NF033876 320 AGT---TVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDAtSAIDIFDKALDYVSNQR 377
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
1-551 |
3.43e-39 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 149.45 E-value: 3.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK12806 1 MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSpasengtedkkkravldslka 160
Cdd:PRK12806 81 AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILD--------------------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 161 GWLSAAEDMVqqyyGLQGDGvTLKINLDTTDGSS-GVLASVTGSTAPGSDVTlnidmadfsDMSTPDGGSgpvyddrvia 239
Cdd:PRK12806 140 GSFSGASFQV----GANSNQ-TINFSIGSIKASSiGGIATATGTEVAGAAAT---------DITIAIGGG---------- 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 240 hemvhAIMLRSTSFNFPQWFTEGTAElihGADERLAGALAGGQTAQGIVDTITGGGFSYEAGYVASRYLHDKLKSMGVDG 319
Cdd:PRK12806 196 -----AATSINSSANFTGALNGQDAT---SAYAKAAAINDAGIGGLSVTASTSGTQAVGAIGGTAGDTYNLTINGVAIYT 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 320 GMkglmtylsQHQSADLDTAL-DAVTGGQYQglgdfmTDFAAGGASfiAGMDLTNADTGAIGGLDADGGPSRDAQGV-VP 397
Cdd:PRK12806 268 NL--------DVATALTNSDLrDAINGVSNQ------TGVVASLNG--GNMTLTAADGRNITVTESGTGFTAGTDGLtVT 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 398 ESGFGTADR-PLRNFKVEYPDIGGGAA-LRHRVQIQVGASAGDLVDMEFAAVNSSALGlggldmrntavallHIDDALAL 475
Cdd:PRK12806 332 GGAFDGALRgTLSISAVDTIAIGGTVAnIGLSANISKDTVGIDSLDVSTASGAQTAIK--------------RIDAALNS 397
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 738284338 476 VTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12806 398 VNSNRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
2-552 |
7.43e-39 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 146.23 E-value: 7.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 2 SLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADST 81
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 82 LSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFspasengtedkkkravldslkag 161
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLL----------------------- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 162 wlsaaedmvqqyyglqgdgvtlkinldttDGSSGVLASVTGSTAPGS-DVTLNIDMADFSDMstpdGGsgpvyddrviah 240
Cdd:PRK08869 138 -----------------------------NGSFGTKSFQIGANSGEAvSLDLKSMRSDAKIM----GG------------ 172
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 241 emvhaimlrsTSFNfpqwftegtaelihgADERLAGALAGGQTAQGIvdtitgggfsyeagyvasrylhdKLKSMGVDGG 320
Cdd:PRK08869 173 ----------VSYD---------------AEGGADKDWTVGAGNTDL-----------------------NVSFDDKGGE 204
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 321 MKGLmtylsqhqsadldtALDAVTGGQYQGLgdfmtdfaaggASFIAG-MDLTNADTgaiggldadggpsrdaqgvvpes 399
Cdd:PRK08869 205 TQAI--------------TINAKAGDDIEEL-----------ATYINGqTDGVGASV----------------------- 236
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 400 gfgTADRPLRNFKVEyPDIGGGAalrhrvqiqvgASAGDLVDmEFAAVNSSALGLGGLDMRNTA---VALLHIDDALALV 476
Cdd:PRK08869 237 ---SEDGKLQLFAAG-QKVSGGV-----------SFSGGLAA-ELGLGNATAVTVDDLDISTVGgaqQAVAVIDAALKYV 300
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 738284338 477 TEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK08869 301 DSHRADLGAFQNRFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
1-552 |
2.14e-38 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 144.92 E-value: 2.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK06819 1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIfspasengtedkkkravldslka 160
Cdd:PRK06819 81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKV----------------------- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 161 gwLSAAEDMVQQyYGLQgDGVTLKINLDTTDGSSGVLASVTGStAPGSDVTLNIDMADfsdmstpdggsgpvyddrviah 240
Cdd:PRK06819 138 --LAEDTTMSIQ-VGAN-DGETIDINLQKIDSKSLGLGSFSVS-GVSGALTSLTFTDT---------------------- 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 241 emvhaimlrstsfnfpqwftegtaelihgaderlagALAGGQTAQGIVDTITGGGFSYEAGYvasrylhdklksmgvdgg 320
Cdd:PRK06819 191 ------------------------------------ALDTSVTGVTTTTALDFSDISTFAKG------------------ 216
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 321 mkglmtylsqhqsaDLDTALDAVTGGQYQGLGDFMTDFAAGGASFiagmdLTNADTGAIGGLDADGGPSRDAqgvvpesg 400
Cdd:PRK06819 217 --------------ATVHGIGDVGTDGAYADGYVIRTTDGKQYKG-----EVDATNGKVTFADDANGDPITD-------- 269
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 401 fgtadrplrnfkveypdigggaalrhrvqiqvgasAGDLVDMEFAAVNSSAlglggldmrnTAVALLHIDDALALVTEQR 480
Cdd:PRK06819 270 -----------------------------------ATKLEAAAQFSPAGKA----------TASPLETLDDALKQVDGLR 304
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 738284338 481 VQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK06819 305 SSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLLR 376
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
1-552 |
3.62e-37 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 144.50 E-value: 3.62e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK08026 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPAS-----------ENGTEDK 149
Cdd:PRK08026 81 ALSEINNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGsmkiqvgandgETITIDL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 150 KKravLDSLKAGwLSAAEdmVQQYYGLQGDGVTLK--INLDTTDGSSGVLASVTGSTAPGSDVTLNIdMADFSDMSTPDG 227
Cdd:PRK08026 161 KK---IDSDTLG-LDGFN--VNGKGTVANTAATVSdlTAAGATLDTTGLYDVKTKNAALTTADALAK-LGDGDKVTATAT 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 228 GSGPVYDDrviAHEMVHAIMLRSTSFNFPQWFTEGTAElIHGADERLAGALAGGQTAQGIVDTITGGGFSYEAGYVAsry 307
Cdd:PRK08026 234 GGDYTYNA---KSGKYQAADLAATLTPDVGGTAGASYT-IKDGTYEVNVDSDGKITLGGSALYIDATGNLTTNNAGA--- 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 308 lhdkLKSMGVDGGMKGLMTYLSQHQSADLDTALDAVTGGQYQGLGDFMTD----FAAGGASFIAGMDLTNADTGAIGG-- 381
Cdd:PRK08026 307 ----ATKATLDALKKTASEGAATAKAALAAAGVTVADGVTAKTVKMSYTDkngkVIDGGYAVKTGDDYYAADYDEITGai 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 382 -------LDADGGPSRDAqgvvpeSGFGTADRplrnfKVEYPDIGGGAALrhrvqiqvgASAGDLVdmEFAAVNSSAlgl 454
Cdd:PRK08026 383 satttyyTAKDGTTKTAA------NKLGGADG-----KTEVVTIDGKTYV---------ASDGKQT--TLAEAAATT--- 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 455 ggldmrnTAVALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAAS 534
Cdd:PRK08026 438 -------TENPLAALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 510
|
570
....*....|....*...
gi 738284338 535 AMLTQANGEPRAVLALLR 552
Cdd:PRK08026 511 SVLAKANQVPQQVLSLLQ 528
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
3-139 |
1.86e-36 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 135.76 E-value: 1.86e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 3 LSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTL 82
Cdd:COG1344 1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 738284338 83 SSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:COG1344 81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFA 137
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
5-139 |
9.98e-29 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 110.90 E-value: 9.98e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 5 INNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSS 84
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 738284338 85 ITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLA 135
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-139 |
1.51e-27 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 112.28 E-value: 1.51e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK12802 1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK12802 81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLD 139
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
18-139 |
2.39e-24 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 103.58 E-value: 2.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 18 LAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLRELAV 97
Cdd:TIGR02550 15 ITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSSVGDVLQRARELAV 94
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 738284338 98 ASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:TIGR02550 95 QAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGRYIFS 136
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
3-153 |
3.48e-23 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 99.90 E-value: 3.48e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 3 LSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTL 82
Cdd:PRK12807 1 MRINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAM 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 738284338 83 SSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPASENGTEDKKKRA 153
Cdd:PRK12807 81 NSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISG 151
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
14-139 |
5.72e-22 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 98.22 E-value: 5.72e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 14 AQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLR 93
Cdd:PRK06663 13 LKSSLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYLQSITNILQRAR 92
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 738284338 94 ELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK06663 93 ELAVQGANGTYQADDKKKIAKEIDELLEDLVDIANARGADGYSIFS 138
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
5-142 |
1.48e-21 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 96.03 E-value: 1.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 5 INNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSS 84
Cdd:PRK12803 3 INHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLNE 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 738284338 85 ITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPAS 142
Cdd:PRK12803 83 VEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKS 140
|
|
| PRK12808 |
PRK12808 |
flagellin; Provisional |
5-552 |
2.06e-20 |
|
flagellin; Provisional
Pssm-ID: 237212 [Multi-domain] Cd Length: 476 Bit Score: 94.25 E-value: 2.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 5 INNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSS 84
Cdd:PRK12808 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 85 ITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPASENG-----TEDKKKRAVLDsLK 159
Cdd:PRK12808 83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNLLNSNSSINiqtldSSDGDKQIGID-LK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 160 AGWLSAaedmvqqyyglqgdgvtLKINlDTTDGSSGVLASVTGSTAPGSDVTLNIDMADFSDmstpdggsgpVYDDRvia 239
Cdd:PRK12808 162 SATLEA-----------------LGIN-DLSIGANTDIEAVSTKIAALDKNTIAKATVEAKA----------AFDKA--- 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 240 hemvhaimlrstsfnfpqwfTEGTAELIHGADERLAgALAGGQTAQGIVDTITGGGFSYEAGYVASRYLHDKLKSMGVDG 319
Cdd:PRK12808 211 --------------------KDDTKAEDSNILDAAA-DGFKDGKADDAAKDVEAIKTALSAFTGAATLEEAEAAKTAFEV 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 320 GMKGLMTYLSQHQSADLDTALDAVTGGQYQGLGDFMTDFAAggASFIAGMDLTNADTGAIgGLDADGGPSRDAQGVVPES 399
Cdd:PRK12808 270 AQKDLVDTYTKKAALTKDAVADLDTAKTTSTRSKAAKDLVA--AYDKAKSGAKPNDVAKA-YLEAKMAYEKDNNAIDGKS 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 400 GFGTADRPLrnfkveypdigggaalrhRVQIQVGASAGDLVDMEFAAVNSsalGLGGLDMRNTAVAllHIDDALALVTEQ 479
Cdd:PRK12808 347 KLEAADDAL------------------EKDAIKTDASKVLVPKLEAAKKA---TTNSKADSLDAVK--AIDEALKTVADN 403
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 738284338 480 RVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK12808 404 RATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 476
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
27-147 |
1.09e-18 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 86.59 E-value: 1.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 27 RLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLRELAVASGNGSYTD 106
Cdd:PRK07701 25 KYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQATDILQRARELAVQAANGTNTQ 104
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 738284338 107 LDRNTLQAEADQILSQITEMGNgASFNGQAIFS-------PASENGTE 147
Cdd:PRK07701 105 TDRQAIAQEIEQLKEQLIQIAN-TQYNGRYIFNgtktdtpPVTDDGDN 151
|
|
| PRK12584 |
PRK12584 |
flagellin A; Reviewed |
1-551 |
4.86e-18 |
|
flagellin A; Reviewed
Pssm-ID: 237146 [Multi-domain] Cd Length: 510 Bit Score: 87.27 E-value: 4.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK12584 1 MAFQVNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPASENgTEDKKKRAVLDSLKA 160
Cdd:PRK12584 81 AMDEQLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTN-KEFQVGAYSNQSIKA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 161 GWLSAAEDMVQQYYGLQGDGVTLKINLDTT----DGSSGV-LASVTGSTAPGSDVTLNIDMADFSDMSTPDGGSGPVY-- 233
Cdd:PRK12584 160 SIGSTTSDKIGQVRIATGALITASGDISLTfkqvDGVNDVtLESVKVSSSAGTGIGVLAEVINKNSDRTGVKAYASVItt 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 234 DDRVIAHEMVHAIMLRSTSFnfpqwfteGTAELI--HGADERLAGALAGGQTAQGIvdtitgggfsyEAgYVASRylhDK 311
Cdd:PRK12584 240 SDVAVQSGSLSNLTLNGIHI--------GNIADIkkNDSDGRLVAAINAVTSETGV-----------EA-YTDQK---GR 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 312 LKSMGVDGgmKGLMtyLSQHQSADLDTALDAVTGGQyqglgdfmtDFAAGGASFiAGMDLTNADTGAIgglDADGGPSRD 391
Cdd:PRK12584 297 LNLRSIDG--RGIE--IKTDSVSNGPSALTMVNGGQ---------DLTKGSTNY-GRLSLTRLDARDI---NVVSASDSQ 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 392 AQGVVpESGFGtaDRPLRNFKVEYPDIGGgaALRHRVQIQVGASAGDLVdmefaAVNSSALGLGGLDMRNTAVALLHIDD 471
Cdd:PRK12584 360 HLGFS-AIGFG--ESQVAETTVNLRDVTG--NFNANVKSASGANYNAVI-----ASGNQSLGSGVTTLRGAMVVMDIAES 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 472 ALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12584 430 AMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANTVQQNILRLL 509
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
3-133 |
6.02e-18 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 84.54 E-value: 6.02e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 3 LSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTL 82
Cdd:PRK12805 1 MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 738284338 83 SSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFN 133
Cdd:PRK12805 81 SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYN 131
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
428-551 |
2.32e-17 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 82.62 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 428 VQIQVGASAGDLVDMEF---AAVNSSALGLGGL----------DMRNTAVALLHIDDALALVTEQRVQVGAYSNRMDAAA 494
Cdd:PRK12802 145 MTFQVGANTGQSNQITFglsASFDATGLGVGSGtlitgadsaaAETNAQAAITAIDAALQTINTTRADLGAAQNRLQSTI 224
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 738284338 495 SNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12802 225 SNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 281
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
33-139 |
2.39e-17 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 85.18 E-value: 2.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 33 SSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLRELAVASGNGSYTDLDRNTL 112
Cdd:PRK12717 31 SSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELAVSAGNGGLTDADRKAI 110
|
90 100
....*....|....*....|....*..
gi 738284338 113 QAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK12717 111 ASELKQIEAQLLGLMNSKDANGQYLFA 137
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
23-150 |
3.61e-17 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 83.81 E-value: 3.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 23 NEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLRELAVASGNG 102
Cdd:PRK08870 21 SQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTLGSVEDLLQRARELVVQAGNG 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 738284338 103 SYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSpasenGTEDKK 150
Cdd:PRK08870 101 SLSDSDRQAIATELQGLRDQLLNLANSKDGSGNYLFA-----GTQSGT 143
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
465-552 |
4.19e-17 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 81.06 E-value: 4.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 465 ALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEP 544
Cdd:COG1344 160 ALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLS 239
|
....*...
gi 738284338 545 raVLALLR 552
Cdd:COG1344 240 --LLDLLR 245
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
469-551 |
4.83e-16 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 73.13 E-value: 4.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 469 IDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVL 548
Cdd:pfam00700 4 IDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQSLL 83
|
...
gi 738284338 549 ALL 551
Cdd:pfam00700 84 NLL 86
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
3-149 |
8.08e-16 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 78.12 E-value: 8.08e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 3 LSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTL 82
Cdd:PRK12804 1 MRINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGAL 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 738284338 83 SSITDRLQRLRELAVASGN-GSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAI----FSPASENGTEDK 149
Cdd:PRK12804 81 TETHSILQRVRELVVQAGNtGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKLldgtFKPAAPAAGTKS 152
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
431-552 |
1.99e-15 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 76.96 E-value: 1.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 431 QVGASAGDLVDMEFAAVNSSALGLGGLD---MRNTAVALLH---------------------IDDALALVTEQRVQVGAY 486
Cdd:PRK12804 156 QIGANAAQQLSVNIEAMSADALGVKDTDgtlVTGKSVSDIDvtkfanaaaaadggfddqlkiVDGAIKQVSDQRSKLGAV 235
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 738284338 487 SNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK12804 236 QNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLLR 301
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
1-552 |
4.38e-15 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 78.15 E-value: 4.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK13589 1 MGFRINTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS----------PASENGT---- 146
Cdd:PRK13589 81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSgnftnqefqiGASSNQTikat 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 147 --EDKKKRAVLDSLKAGWLSAAEDMVQ----QYYGLQgDGVTLKINLDTTDGSS-GVLASVTGSTAPGSDVTLNIDmadf 219
Cdd:PRK13589 161 igATQSSKIGVTRFETGGRSFTSGEVQltikNYNGID-DFKFQKVVISTSVGTGlGALAEEINKSADKTGVRATFT---- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 220 sdmstpdggsgpvyddrvIAHEMVHAIMLRSTSFNFP-QWFTEGTAELIHG-ADERLAGALAGGQTAQGIVDTITGGG-- 295
Cdd:PRK13589 236 ------------------VETTGVAAIKAGTTSQDFAiNGVTIGQVAYKDGdGNGALVSAINSVKDTTGVEASKDANGql 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 296 FSYEAGYVASRYLHDKLKSMGVDGGMKGLMTYLSQHQSADLDTALDAvTGGQYQGLG--DFMTDFAAGGASFIAGMDLTN 373
Cdd:PRK13589 298 VLTSRDGRGIKIDGNIGGGAGILANMKENYGRLSLVKNDGKDILISG-TNLSAIGMGatDMISQASVSLRESKGRIDANI 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 374 ADtgAIGGLDADGGPSR-------------DAQGVVPESGFGTADRPLRNFKVEYPD----IGGGAALRHRVQIQVGA-- 434
Cdd:PRK13589 377 AD--AMGFNSYKGGGKFvvtggfssvsafmSSEGSGFSRGSGYSVGSGKNYSVGLSQgiqiISSASAMSTVYNVSAGSgf 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 435 SAGDLVDmEFAAVNSSALGL----GGLDMRNTAVALLHI-DDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARS 509
Cdd:PRK13589 455 SSGSGLS-QFATMKTTAAGVkdetAGVTTLKGAMAVMDIaETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAES 533
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 738284338 510 RIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK13589 534 TIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 576
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
1-144 |
5.28e-14 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 74.52 E-value: 5.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK13588 1 MSFRINTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADK 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPASEN 144
Cdd:PRK13588 81 AMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSN 144
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
1-552 |
6.48e-13 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 71.17 E-value: 6.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSLSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADS 80
Cdd:PRK08411 1 MGFRINTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 81 TLSSITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS----------PASENGTEDKK 150
Cdd:PRK08411 81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSgnftnqefqiGASSNQTVKAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 151 KRAVLDS------LKAGWLSAAEDMVQ----QYYGLQgDGVTLKINLDTTDGSS-GVLASVTGSTAPGSDVTLNID---- 215
Cdd:PRK08411 161 IGATQSSkigvtrFETGARITTSGVVQltikNYNGID-DFKFQNVVISTSVGTGlGALAEEINKNADKTGVRATFDvett 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 216 -MADFSDMSTPDGGS------GPV-YDDRVIAHEMVHAIMLRSTSFNFPQWFTEGTAELIHGADERlagalagGQTAQGI 287
Cdd:PRK08411 240 gVAAIKAGTTSDDFAingvtiGKVeYKDGDGNGALVAAINSVKDTTGVEASIDENGKLVLTSRDGR-------GIKIDGD 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 288 VDTITGGGFSYEAGYVASRYLHDKLKSMGVDGGMKGLMTYLSQHQSADLDTALDAVTGGQYQGLGDFMTDFAAGGASFIA 367
Cdd:PRK08411 313 IGGGSGILANMKENYGRLSLVKNDGKDILISGTNLSFAGMGATDMISQASVSLRESKGQIDANVADAMGFNSYKGGVMIQ 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 368 GMDLTNADTGAIGGLDADGGPSRDAQGVVPESGFGTADRplrnfkveyPDIGGGAALRHRVQIQVGASAGDLVDmEFAAV 447
Cdd:PRK08411 393 GFSSVSAFMSSEGSGFSQGSGYSVGSGKNYSVGLSSGIQ---------ISSASAMSTVYVVSAGSGFSSGSNLS-QFAAM 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 448 NSSALGL----GGLDMRNTAVALLHI-DDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQ 522
Cdd:PRK08411 463 KTTAANVkdetAGVTTLKGAMAVMDIaETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESAN 542
|
570 580 590
....*....|....*....|....*....|
gi 738284338 523 LTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK08411 543 YSKANILAQSGSYAMAQANAVQQNVLRLLQ 572
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
408-552 |
1.61e-12 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 68.31 E-value: 1.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 408 LRNFKVEYPDIGGGAALRHRVQIQVGASAGDLVDMEFAAVNSSALGLGGlDMRNTAV--------ALLHIDDALALVTEQ 479
Cdd:PRK12807 136 LAGTGAVTIGSTSISGAEISIETLDSSATNQQITIKLANTTAEKLGIDA-TTSNISIsgaasalaAISALNTALNTVAGN 214
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 738284338 480 RVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALLR 552
Cdd:PRK12807 215 RATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 287
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
16-139 |
7.27e-12 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 66.58 E-value: 7.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 16 RKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLSSITDRLQRLREL 95
Cdd:PRK07192 14 RSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSGVNDQLQSIRSL 93
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 738284338 96 AVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK07192 94 LVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGNYLFS 137
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
464-552 |
2.53e-11 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 65.22 E-value: 2.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 464 VALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGE 543
Cdd:PRK12803 247 MSLAKIENAIRMISDQRANLGAFQNRLESIKASTEYAIENLKASYAQIKDATMTDEVVASTTNSILTQSAMAMIAQANQV 326
|
....*....
gi 738284338 544 PRAVLALLR 552
Cdd:PRK12803 327 PQYVLSLLR 335
|
|
| flgL |
PRK08073 |
flagellar hook-associated protein 3; |
4-146 |
1.00e-08 |
|
flagellar hook-associated protein 3;
Pssm-ID: 181222 [Multi-domain] Cd Length: 287 Bit Score: 56.53 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 4 SINNQSLSLHAQrkLAEHTNEVTrlvsrlsSGVRITSATDDPAGQAVAGRMKSQLTGMRQAMRGINDATSMLQVADSTLS 83
Cdd:PRK08073 11 WAKNQLMDLNVQ--QQYHRNQVT-------SGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLNQTENTLS 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 84 SITDRLQRLRELAVASGNGSYTDLDRNTLQAEADQILSQITEMGNGASfNGQAIFS-------PASENGT 146
Cdd:PRK08073 82 GMSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLANTKE-QGRYVFGgdsaekkPFTEDGT 150
|
|
| flgL |
PRK08027 |
flagellar hook-filament junction protein FlgL; |
32-139 |
1.77e-06 |
|
flagellar hook-filament junction protein FlgL;
Pssm-ID: 181202 [Multi-domain] Cd Length: 317 Bit Score: 50.13 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 32 LSSGVRITSATDDP--AGQAVagrMKSQLTGM-RQAMRGINDATSMLQVADSTLSSITDRLQRLRELAVASGNGSYTDLD 108
Cdd:PRK08027 30 MSTGKRVVNPSDDPiaASQAV---VLSQAQAQnSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYAGNGTLSDDD 106
|
90 100 110
....*....|....*....|....*....|.
gi 738284338 109 RNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK08027 107 RASLATDLQGLRDQLLNLANTTDGNGRYIFA 137
|
|
| flgL |
PRK12718 |
flagellar hook-associated protein FlgL; Provisional |
25-139 |
2.69e-06 |
|
flagellar hook-associated protein FlgL; Provisional
Pssm-ID: 79176 [Multi-domain] Cd Length: 510 Bit Score: 50.19 E-value: 2.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 25 VTRLVSRLSSGVRITSATDDPAGQAVAGRMkSQLTGMRQAMRG-INDATSMLQVADSTLSSITDRLQRLRELAVASGNGS 103
Cdd:PRK12718 23 MARLQEQLSSGRRVLTPADDPLAAALAVNV-SQTSSMNSNYDAnRKQAEQALGAQTNTLQSVVKNMQEMLKRVVEAGNGT 101
|
90 100 110
....*....|....*....|....*....|....*.
gi 738284338 104 YTDLDRNTLQAEADQILSQITEMGNGASFNGQAIFS 139
Cdd:PRK12718 102 MSDADRQALVIALKGAREELVGLANATDGNGQYLFS 137
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
427-551 |
2.33e-05 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 46.40 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 427 RVQIQVGASAGDLVDME-FAAVNSSA----LGLGGL----------DMRNTAVALLHIDDALALVTEQRVQVGAYSNRMD 491
Cdd:PRK12805 146 QVSIQASDKANDLINIDlFNAKGLSAgtitLGSGSTvagysalsvaDADSSQEATEAIDELINNISNGRALLGAGMSRLS 225
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 492 AAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQANGEPRAVLALL 551
Cdd:PRK12805 226 YNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLI 285
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
469-539 |
4.19e-05 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 45.80 E-value: 4.19e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 738284338 469 IDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQAASAMLTQ 539
Cdd:TIGR02550 226 LDKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAK 296
|
|
| PRK12687 |
PRK12687 |
flagellin; Reviewed |
1-214 |
1.05e-03 |
|
flagellin; Reviewed
Pssm-ID: 105853 [Multi-domain] Cd Length: 311 Bit Score: 41.19 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 1 MSLSINNQSlSLHAQRKLAEHTNEVTRLVSRLSSGVRITSATDDPAGQAVAGRMKSQ---LTGMRQAMrGINDAT--SML 75
Cdd:PRK12687 1 MSSLLTNTS-AMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDneaLSAVSDAL-GLGAATvdTMY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 76 QVADSTLSSITDRLQRLRELAVASGNGSytdLDRNTLQAEADQILSQITEMGNGASFNGQAIFSPASENGTEDKKKRAVL 155
Cdd:PRK12687 79 TALTSVVGDSKSGLTALKAKLVAAREPG---IDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVDSSPSSYNATKSVVS 155
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 738284338 156 DSLKAGWLSAAEDMvqqyyglqgDGVTLKINLDTTDGSS--GVL-ASVTGSTAPGSDVTLNI 214
Cdd:PRK12687 156 SFTRVGGTVAIKTI---------DVNIAKLALYDTNGSSttGILdKTVTVGTATASVSSIDI 208
|
|
| PRK14692 |
PRK14692 |
flagellar hook-associated protein FlgL; |
458-539 |
1.35e-03 |
|
flagellar hook-associated protein FlgL;
Pssm-ID: 173155 [Multi-domain] Cd Length: 749 Bit Score: 41.48 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 458 DMRNTAV--ALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQLTRAQILQQA--- 532
Cdd:PRK14692 656 DPRNTGMqgALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQAslk 735
|
....*..
gi 738284338 533 ASAMLTQ 539
Cdd:PRK14692 736 ASTTISQ 742
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
444-535 |
3.42e-03 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 39.59 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 738284338 444 FAAVNSSALGLGGLDMRNTAVALLHIDDALALVTEQRVQVGAYSNRMDAAASNNQMASMNLEAARSRIEDVDYAGTAVQL 523
Cdd:PRK07701 192 FEMLDNLENALDSGDTQGVSNLLSDIDQHIDNVLAVRAELGARSNRLELIENRLSDQEVNATKLLSDNEDVDLAEVITDL 271
|
90
....*....|..
gi 738284338 524 TRAQILQQAASA 535
Cdd:PRK07701 272 KTQENVYRAALA 283
|
|
| |
