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Conserved domains on  [gi|656020314|ref|WP_029060187|]
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MULTISPECIES: F0F1 ATP synthase subunit C [Stappia]

Protein Classification

F0F1 ATP synthase subunit C( domain architecture ID 10012942)

F0F1 ATP synthase subunit C is part of the membrane proton channel of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK07558 PRK07558
F0F1 ATP synthase subunit C; Validated
 1-64 3.18e-19

F0F1 ATP synthase subunit C; Validated


:

Pssm-ID: 181027  Cd Length: 74  Bit Score: 73.46  E-value: 3.18e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 656020314  1 MEAEAAKYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:PRK07558  1 MDAEALKFIGAGLACIGMAGAALGVGNIFGNYLSGALRNPSAADSQFGYLLIGAALAEALGIFS 64
 
Name Accession Description Interval E-value
PRK07558 PRK07558
F0F1 ATP synthase subunit C; Validated
 1-64 3.18e-19

F0F1 ATP synthase subunit C; Validated


Pssm-ID: 181027  Cd Length: 74  Bit Score: 73.46  E-value: 3.18e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 656020314  1 MEAEAAKYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:PRK07558  1 MDAEALKFIGAGLACIGMAGAALGVGNIFGNYLSGALRNPSAADSQFGYLLIGAALAEALGIFS 64
ATP-synt_Fo_c_ATP5G3 cd18182
ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP ...
 7-64 1.31e-11

ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP synthase lipid-binding protein, ATP synthase proteolipid P3, ATP synthase proton-transporting mitochondrial F(o) complex subunit C3, ATPase protein 9, or ATPase subunit c) transports protons across the inner mitochondrial membrane to the F1-ATPase protruding on the matrix side, resulting in the generation of ATP.


Pssm-ID: 349422  Cd Length: 65  Bit Score: 53.67  E-value: 1.31e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 656020314  7 KYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:cd18182   1 KYIGAGLATIGLAGAGIGIGNVFGSLINGVARNPSAKQQLFTYAILGFALTEAIGLFA 58
AtpE COG0636
FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy ...
 5-64 1.89e-04

FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440401  Cd Length: 75  Bit Score: 35.87  E-value: 1.89e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 656020314  5 AAKYIGAGLACLGMGGAALGLG-NIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:COG0636   4 AASAIGAGLAIGLAAIGAGIGIgLAGGKALEAIARQPEAAGKLQTTMFIGAALIEALAIYA 64
 
Name Accession Description Interval E-value
PRK07558 PRK07558
F0F1 ATP synthase subunit C; Validated
 1-64 3.18e-19

F0F1 ATP synthase subunit C; Validated


Pssm-ID: 181027  Cd Length: 74  Bit Score: 73.46  E-value: 3.18e-19
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 656020314  1 MEAEAAKYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:PRK07558  1 MDAEALKFIGAGLACIGMAGAALGVGNIFGNYLSGALRNPSAADSQFGYLLIGAALAEALGIFS 64
ATP-synt_Fo_c_ATP5G3 cd18182
ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP ...
 7-64 1.31e-11

ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP synthase lipid-binding protein, ATP synthase proteolipid P3, ATP synthase proton-transporting mitochondrial F(o) complex subunit C3, ATPase protein 9, or ATPase subunit c) transports protons across the inner mitochondrial membrane to the F1-ATPase protruding on the matrix side, resulting in the generation of ATP.


Pssm-ID: 349422  Cd Length: 65  Bit Score: 53.67  E-value: 1.31e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 656020314  7 KYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:cd18182   1 KYIGAGLATIGLAGAGIGIGNVFGSLINGVARNPSAKQQLFTYAILGFALTEAIGLFA 58
ATP9 MTH00222
ATP synthase F0 subunit 9; Provisional
 5-63 2.94e-06

ATP synthase F0 subunit 9; Provisional


Pssm-ID: 164765 [Multi-domain]  Cd Length: 77  Bit Score: 40.60  E-value: 2.94e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 656020314  5 AAKYIGAGLACLGMGGAALGLGNIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIF 63
Cdd:MTH00222  7 AAKFVGAGAATIGAAGSGAGIGTVFGNLIIGYARNPSLKQQLFTYAILGFAISEAMGLF 65
AtpE COG0636
FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy ...
 5-64 1.89e-04

FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440401  Cd Length: 75  Bit Score: 35.87  E-value: 1.89e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 656020314  5 AAKYIGAGLACLGMGGAALGLG-NIFGNYLSGALRNPSAADGQFGRLILGFAVTEALGIFS 64
Cdd:COG0636   4 AASAIGAGLAIGLAAIGAGIGIgLAGGKALEAIARQPEAAGKLQTTMFIGAALIEALAIYA 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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