|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-471 |
3.91e-109 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 330.38 E-value: 3.91e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 112 QLEIEELINAANRVAEGANLGGETPLLDGPEGNFTANSDQDIFARV-TGMMEQAEANIKAHYGLVGDGeDTFQMLISNYD 190
Cdd:NF033876 2 QKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLkSGWLENAEDLIKEYYGLTADG-ADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 191 GAGNVVAFVSSS-----PGNVSSMTLDRDDFN-GSIPN-------IDRIIEHEMVHAVMRNQIT-SAMPLWFTEGTAELI 256
Cdd:NF033876 81 GAGGTLAYVSSGsggggKGGNLTLTIDMADFSpANLPNggtapqyLDRTIAHEMVHAVMGRTMNfSSLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 257 HGADDRLSADLAAAGSSTALMAAWDGAAD---DSADYSRAYVAARMLHDDLKEAGhAGGMRSLMQEMAKD-GTTLDSSLQ 332
Cdd:NF033876 161 HGADERLAADLAGGTSDAAGVAALFNGGAwtsTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKANaGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 333 KLLG---MTQAQFETRVQNDGASYIDN-MDLTNNDLGGIGAFDADNLGIRNAADAVGDAFSY-AEQPLEGFKLDWSAagf 407
Cdd:NF033876 240 AATGgafATEADFLADFNANGAAFIKNyMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYpGEDPLSGFNVIWPT--- 316
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 654847818 408 TPAEKKTFTFQTGSNSGERSNFTIRGGSAERIGLAGVNVSANARGSIAIVDKALKNIHEIRREI 471
Cdd:NF033876 317 FSGAGTTVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDATSAIDIFDKALDYVSNQRAYL 380
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
1-540 |
2.59e-60 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 203.62 E-value: 2.59e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGA 80
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 81 MSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGeTPLLDGPEGNFT----ANSDQDIFAR 156
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGG-TKLLNGSFGTKSfqigANSGEAVSLD 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 157 VTGMMeqaeanikahyglvgdgEDTFQMLISNYDGAGNVVAFVSSSPGNvSSMTLDRDDFNGSIPNIDriiehemVHAVM 236
Cdd:PRK08869 160 LKSMR-----------------SDAKIMGGVSYDAEGGADKDWTVGAGN-TDLNVSFDDKGGETQAIT-------INAKA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 237 RNQItsamplwftEGTAELIHGADDRLSADLAAAGSSTALMAAwdgaaddsadysrayvaarmlhddlkeaghaggmrsl 316
Cdd:PRK08869 215 GDDI---------EELATYINGQTDGVGASVSEDGKLQLFAAG------------------------------------- 248
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 317 mqEMAKDGTTLDSSLQKLLGMTqaqfetrvqNDGASYIDNMDLTNndlggigafdadnlgirnaadavgdafsyaeqple 396
Cdd:PRK08869 249 --QKVSGGVSFSGGLAAELGLG---------NATAVTVDDLDIST----------------------------------- 282
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 397 gfkldwsaagftpaekktftfQTGSNSgersnftirggsaeriglagvnvsanargSIAIVDKALKNIHEIRREIGGAMA 476
Cdd:PRK08869 283 ---------------------VGGAQQ-----------------------------AVAVIDAALKYVDSHRADLGAFQN 312
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 654847818 477 EMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLLG 540
Cdd:PRK08869 313 RFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-140 |
1.37e-32 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 124.98 E-value: 1.37e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:COG1344 3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGEtPLLDG 140
Cdd:COG1344 83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGR-YLFAG 138
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-146 |
2.75e-27 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 111.12 E-value: 2.75e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGA 80
Cdd:PRK12802 2 ALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 654847818 81 MSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDGPEGNFT 146
Cdd:PRK12802 82 LQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKN-LLDGSAGTMT 146
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
4-140 |
4.76e-27 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 106.27 E-value: 4.76e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDG 140
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEY-LLAG 136
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
414-540 |
3.62e-18 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 84.93 E-value: 3.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 414 TFTFQTGSNSGERSNFTIR------------GGSAERIGLAGVNVSANARGSIAIVDKALKNIHEIRREIGGAMAEMESM 481
Cdd:PRK12802 144 TMTFQVGANTGQSNQITFGlsasfdatglgvGSGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQST 223
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 654847818 482 LRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLLG 540
Cdd:PRK12802 224 ISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
4-130 |
3.63e-18 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 85.09 E-value: 3.63e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEI----EELINAANRVAEGAN 130
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIkqllDQLVNLANTKDGNGR 132
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
447-540 |
1.12e-14 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 73.75 E-value: 1.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 447 SANARGSIAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLA 526
Cdd:COG1344 154 AGQRTAALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALA 233
|
90
....*....|....
gi 654847818 527 QANQSPniALSLLG 540
Cdd:COG1344 234 QANQLS--LLDLLR 245
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
454-539 |
3.18e-14 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 68.13 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 454 IAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPN 533
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80
|
....*.
gi 654847818 534 IALSLL 539
Cdd:pfam00700 81 SLLNLL 86
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
458-539 |
7.43e-06 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 48.11 E-value: 7.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 458 DKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQspniaLS 537
Cdd:TIGR02550 227 DKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ-----LS 301
|
..
gi 654847818 538 LL 539
Cdd:TIGR02550 302 LF 303
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-471 |
3.91e-109 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 330.38 E-value: 3.91e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 112 QLEIEELINAANRVAEGANLGGETPLLDGPEGNFTANSDQDIFARV-TGMMEQAEANIKAHYGLVGDGeDTFQMLISNYD 190
Cdd:NF033876 2 QKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLkSGWLENAEDLIKEYYGLTADG-ADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 191 GAGNVVAFVSSS-----PGNVSSMTLDRDDFN-GSIPN-------IDRIIEHEMVHAVMRNQIT-SAMPLWFTEGTAELI 256
Cdd:NF033876 81 GAGGTLAYVSSGsggggKGGNLTLTIDMADFSpANLPNggtapqyLDRTIAHEMVHAVMGRTMNfSSLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 257 HGADDRLSADLAAAGSSTALMAAWDGAAD---DSADYSRAYVAARMLHDDLKEAGhAGGMRSLMQEMAKD-GTTLDSSLQ 332
Cdd:NF033876 161 HGADERLAADLAGGTSDAAGVAALFNGGAwtsTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKANaGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 333 KLLG---MTQAQFETRVQNDGASYIDN-MDLTNNDLGGIGAFDADNLGIRNAADAVGDAFSY-AEQPLEGFKLDWSAagf 407
Cdd:NF033876 240 AATGgafATEADFLADFNANGAAFIKNyMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYpGEDPLSGFNVIWPT--- 316
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 654847818 408 TPAEKKTFTFQTGSNSGERSNFTIRGGSAERIGLAGVNVSANARGSIAIVDKALKNIHEIRREI 471
Cdd:NF033876 317 FSGAGTTVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDATSAIDIFDKALDYVSNQRAYL 380
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
1-540 |
2.59e-60 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 203.62 E-value: 2.59e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGA 80
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 81 MSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGeTPLLDGPEGNFT----ANSDQDIFAR 156
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGG-TKLLNGSFGTKSfqigANSGEAVSLD 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 157 VTGMMeqaeanikahyglvgdgEDTFQMLISNYDGAGNVVAFVSSSPGNvSSMTLDRDDFNGSIPNIDriiehemVHAVM 236
Cdd:PRK08869 160 LKSMR-----------------SDAKIMGGVSYDAEGGADKDWTVGAGN-TDLNVSFDDKGGETQAIT-------INAKA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 237 RNQItsamplwftEGTAELIHGADDRLSADLAAAGSSTALMAAwdgaaddsadysrayvaarmlhddlkeaghaggmrsl 316
Cdd:PRK08869 215 GDDI---------EELATYINGQTDGVGASVSEDGKLQLFAAG------------------------------------- 248
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 317 mqEMAKDGTTLDSSLQKLLGMTqaqfetrvqNDGASYIDNMDLTNndlggigafdadnlgirnaadavgdafsyaeqple 396
Cdd:PRK08869 249 --QKVSGGVSFSGGLAAELGLG---------NATAVTVDDLDIST----------------------------------- 282
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 397 gfkldwsaagftpaekktftfQTGSNSgersnftirggsaeriglagvnvsanargSIAIVDKALKNIHEIRREIGGAMA 476
Cdd:PRK08869 283 ---------------------VGGAQQ-----------------------------AVAVIDAALKYVDSHRADLGAFQN 312
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 654847818 477 EMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLLG 540
Cdd:PRK08869 313 RFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
4-541 |
1.40e-37 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 144.45 E-value: 1.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK12806 5 INTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAMQE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDGPEGNFT----ANSDQDIFARVTG 159
Cdd:PRK12806 85 TTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQR-ILDGSFSGASfqvgANSNQTINFSIGS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 160 MMEQAEANIKAHYGLVGDGEDTFQMLISNYDGAGNVVAFVSSSPGnvssmTLDRDDfngsipnidriiehemvhAVMRNQ 239
Cdd:PRK12806 164 IKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSANFTG-----ALNGQD------------------ATSAYA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 240 ITSAMPLWFTEGtaelihgaddrLSADLAAAGSSTAlmAAWDGAADDSADYSRAYVAarmlhddlkeaghaggmrsLMQE 319
Cdd:PRK12806 221 KAAAINDAGIGG-----------LSVTASTSGTQAV--GAIGGTAGDTYNLTINGVA-------------------IYTN 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 320 MAKDGTTLDSSLQKLLGMTQAQFETRVQNDGAsyidNMDLTNNDLGGIgAFDADNLGIRNAADAVGDAFSYAEQPLEGfk 399
Cdd:PRK12806 269 LDVATALTNSDLRDAINGVSNQTGVVASLNGG----NMTLTAADGRNI-TVTESGTGFTAGTDGLTVTGGAFDGALRG-- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 400 ldwsaaGFTPAEKKTFTFQTG-SNSGERSNFTirggsAERIGLAGVNVS--ANARGSIAIVDKALKNIHEIRREIGGAMA 476
Cdd:PRK12806 342 ------TLSISAVDTIAIGGTvANIGLSANIS-----KDTVGIDSLDVStaSGAQTAIKRIDAALNSVNSNRANMGALQN 410
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 654847818 477 EMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLLGR 541
Cdd:PRK12806 411 RFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR 475
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-140 |
1.37e-32 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 124.98 E-value: 1.37e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:COG1344 3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGEtPLLDG 140
Cdd:COG1344 83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGR-YLFAG 138
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
1-539 |
1.98e-32 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 127.97 E-value: 1.98e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGA 80
Cdd:PRK06819 2 AAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 81 MSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLldgpegnfTANSDQDIfarvtgm 160
Cdd:PRK06819 82 LNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVL--------AEDTTMSI------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 161 meQAEANikahyglvgDGEDtfqmlisnydgagnvvafVSSSPGNVSSMTLDRDDFNGSIPnidriiehemvhavmrnqi 240
Cdd:PRK06819 147 --QVGAN---------DGET------------------IDINLQKIDSKSLGLGSFSVSGV------------------- 178
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 241 tsamplwftegtaelihgaddrlSADLAAAGSSTALMAAWDGAADDSADYsrayvaarmlhddlkeaghaggmrslmqem 320
Cdd:PRK06819 179 -----------------------SGALTSLTFTDTALDTSVTGVTTTTAL------------------------------ 205
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 321 akdgttldsslqKLLGMTQAQFETRVQNDGASYIDNMDLTNNDlggigAFDADNLGIRNAADAVGDAFSYAEqplegfkl 400
Cdd:PRK06819 206 ------------DFSDISTFAKGATVHGIGDVGTDGAYADGYV-----IRTTDGKQYKGEVDATNGKVTFAD-------- 260
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 401 dwsAAGFTPAEKKTFTFQTGSnsgersnftirggsaeriglagVNVSANARGS-IAIVDKALKNIHEIRREIGGAMAEME 479
Cdd:PRK06819 261 ---DANGDPITDATKLEAAAQ----------------------FSPAGKATASpLETLDDALKQVDGLRSSLGAVQNRFE 315
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 480 SMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLL 539
Cdd:PRK06819 316 STVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLL 375
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
4-539 |
5.07e-29 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 120.62 E-value: 5.07e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK08026 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAeganlgGETPLldgpegnftanSDQDIFARVTGMMEQ 163
Cdd:PRK08026 85 INNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVS------GQTQF-----------NGVNVLAKDGSMKIQ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 164 AEANikahyglvgDGE----DTFQmlisnydgagnvvafvssspgnVSSMTLDRDDFN----GSIPNidriiehemvhav 235
Cdd:PRK08026 148 VGAN---------DGEtitiDLKK----------------------IDSDTLGLDGFNvngkGTVAN------------- 183
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 236 mrnqiTSAMPLWFTEGTAELIHGADDRLSADLAAAGSSTALMAAWDGAA-------------DDSADYSRAYVAARMLHD 302
Cdd:PRK08026 184 -----TAATVSDLTAAGATLDTTGLYDVKTKNAALTTADALAKLGDGDKvtatatggdytynAKSGKYQAADLAATLTPD 258
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 303 DLKEAGHAGGMRSLMQE--MAKDGT-TLD-------------------------SSLQKLLGMTQAQFETRVQNDGASYI 354
Cdd:PRK08026 259 VGGTAGASYTIKDGTYEvnVDSDGKiTLGgsalyidatgnlttnnagaatkatlDALKKTASEGAATAKAALAAAGVTVA 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 355 DNmdlTNNDLGGIGAFDADNLGIRNAADAVGDAFSYAeqplegfKLDWSAAGFTPAEKKTFTFQTGSNSGERSNFTIRGG 434
Cdd:PRK08026 339 DG---VTAKTVKMSYTDKNGKVIDGGYAVKTGDDYYA-------ADYDEITGAISATTTYYTAKDGTTKTAANKLGGADG 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 435 SAERIGLAG-VNVSANARGS-------------IAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRIT 500
Cdd:PRK08026 409 KTEVVTIDGkTYVASDGKQTtlaeaaatttenpLAALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQ 488
|
570 580 590
....*....|....*....|....*....|....*....
gi 654847818 501 DTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLL 539
Cdd:PRK08026 489 DADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLL 527
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-146 |
2.75e-27 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 111.12 E-value: 2.75e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGA 80
Cdd:PRK12802 2 ALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 654847818 81 MSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDGPEGNFT 146
Cdd:PRK12802 82 LQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKN-LLDGSAGTMT 146
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
4-140 |
4.76e-27 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 106.27 E-value: 4.76e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDG 140
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEY-LLAG 136
|
|
| PRK12584 |
PRK12584 |
flagellin A; Reviewed |
1-539 |
5.78e-23 |
|
flagellin A; Reviewed
Pssm-ID: 237146 [Multi-domain] Cd Length: 510 Bit Score: 102.29 E-value: 5.78e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 1 MVF-VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADG 79
Cdd:PRK12584 1 MAFqVNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 80 AMSEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLldgpEGNFT-------ANSDQD 152
Cdd:PRK12584 81 AMDEQLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALL----SGQFTnkefqvgAYSNQS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 153 IFARVTGMMEQAEANIKAHYGLVGDGEDTFQMLISNYDGAGNVV---AFVSSSPGN---VSSMTLDRddfngsipNIDRI 226
Cdd:PRK12584 157 IKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTlesVKVSSSAGTgigVLAEVINK--------NSDRT 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 227 ieheMVHAVMRNQITSAMPLWFTEGTAELIHGADDRLSADLAAAGSSTALMAAWDGAADDSAdySRAYVaarmlhddlKE 306
Cdd:PRK12584 229 ----GVKAYASVITTSDVAVQSGSLSNLTLNGIHIGNIADIKKNDSDGRLVAAINAVTSETG--VEAYT---------DQ 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 307 AGHAgGMRSLMQEMAKDGTTLDSSLQKLLGMTQAqfeTRVQNDGASYIDNMDLTNndlggigaFDADNLGIRNAADAVGD 386
Cdd:PRK12584 294 KGRL-NLRSIDGRGIEIKTDSVSNGPSALTMVNG---GQDLTKGSTNYGRLSLTR--------LDARDINVVSASDSQHL 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 387 AFSYAeqpleGFKLDWSAAGFTPAE--KKTFTFQTGSNSGERSNFTIRGGSAErIGlAGVNVSANARGSIAIVDKALKNI 464
Cdd:PRK12584 362 GFSAI-----GFGESQVAETTVNLRdvTGNFNANVKSASGANYNAVIASGNQS-LG-SGVTTLRGAMVVMDIAESAMKML 434
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 654847818 465 HEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLL 539
Cdd:PRK12584 435 DKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANTVQQNILRLL 509
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
4-152 |
4.53e-22 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 96.43 E-value: 4.53e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK12807 3 INTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAMNS 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLLDGPEGNFTANSDQD 152
Cdd:PRK12807 83 VSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISG 151
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
4-170 |
5.94e-21 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 93.52 E-value: 5.94e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK12804 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGALTE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQmSSNTLSQDDRD--GAQLEIEELINAANRVAEGANLGGETpLLDGPEGNFTANSDQDIFARVTGM- 160
Cdd:PRK12804 83 THSILQRVRELVVQ-AGNTGTQDGTDlgAIQDEIKALVDEIDGISDRTEFNGKK-LLDGTFKPAAPAAGTKSLTFQIGAn 160
|
170
....*....|.
gi 654847818 161 -MEQAEANIKA 170
Cdd:PRK12804 161 aAQQLSVNIEA 171
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
4-539 |
4.20e-20 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 93.90 E-value: 4.20e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK08411 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLldgpEGNFT-------ANSDQDIFAR 156
Cdd:PRK08411 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLL----SGNFTnqefqigASSNQTVKAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 157 VTGMMEQAEANIKAHYGLVGDGEDTFQMLISNYDGAGNVV---AFVSSSPGNVSSMTLDRDDFNGSIPNIDRIIEHEMVH 233
Cdd:PRK08411 161 IGATQSSKIGVTRFETGARITTSGVVQLTIKNYNGIDDFKfqnVVISTSVGTGLGALAEEINKNADKTGVRATFDVETTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 234 AVMRNQITSAMPLWFTEGTAELIHGADDRLSADLAAAGSSTALMAAWDGAADDSADYSRAYVAARMLHDDLKEAGHAGGM 313
Cdd:PRK08411 241 VAAIKAGTTSDDFAINGVTIGKVEYKDGDGNGALVAAINSVKDTTGVEASIDENGKLVLTSRDGRGIKIDGDIGGGSGIL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 314 R---------SLMQEMAKDGTTLDSSLQkLLGMTQAQFETRVQNDGASYIDNMDLTNNDLGGIGAFDADNL-----GIRN 379
Cdd:PRK08411 321 AnmkenygrlSLVKNDGKDILISGTNLS-FAGMGATDMISQASVSLRESKGQIDANVADAMGFNSYKGGVMiqgfsSVSA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 380 AADAVGDAFSYAEQPLEGFKLDWS-----AAGFTPAEKKTFTFQTGSNSGERSN-------FTIRGGSAERIGLAGVNVS 447
Cdd:PRK08411 400 FMSSEGSGFSQGSGYSVGSGKNYSvglssGIQISSASAMSTVYVVSAGSGFSSGsnlsqfaAMKTTAANVKDETAGVTTL 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 448 ANARGSIAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQ 527
Cdd:PRK08411 480 KGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQ 559
|
570
....*....|..
gi 654847818 528 ANQSPNIALSLL 539
Cdd:PRK08411 560 ANAVQQNVLRLL 571
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
2-129 |
3.37e-19 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 88.71 E-value: 3.37e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 2 VFVNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAM 81
Cdd:PRK12803 1 MIINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 654847818 82 SEITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGA 129
Cdd:PRK12803 81 NEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 128
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
4-130 |
1.97e-18 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 85.69 E-value: 1.97e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK12805 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSS 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGAN 130
Cdd:PRK12805 83 MSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTN 129
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
414-540 |
3.62e-18 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 84.93 E-value: 3.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 414 TFTFQTGSNSGERSNFTIR------------GGSAERIGLAGVNVSANARGSIAIVDKALKNIHEIRREIGGAMAEMESM 481
Cdd:PRK12802 144 TMTFQVGANTGQSNQITFGlsasfdatglgvGSGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQST 223
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 654847818 482 LRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLLG 540
Cdd:PRK12802 224 ISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
4-130 |
3.63e-18 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 85.09 E-value: 3.63e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEI----EELINAANRVAEGAN 130
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIkqllDQLVNLANTKDGNGR 132
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
4-539 |
4.50e-18 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 87.39 E-value: 4.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK13589 5 INTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLldgpEGNFT-------ANSDQDIFAR 156
Cdd:PRK13589 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLL----SGNFTnqefqigASSNQTIKAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 157 VTGMMEQAEANIKAHYGLVGDGEDTFQMLISNYDGAGN-------VVAFVSSSPGNVSSMTLDRDDFNGSIPNIDriIEH 229
Cdd:PRK13589 161 IGATQSSKIGVTRFETGGRSFTSGEVQLTIKNYNGIDDfkfqkvvISTSVGTGLGALAEEINKSADKTGVRATFT--VET 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 230 EMVHAVMRNqiTSAMPLWFTEGTAELIHGADDRLSADLAAAGSSTALMAAWDGAADDSADYSRAYVAARMLHDDLKEAGH 309
Cdd:PRK13589 239 TGVAAIKAG--TTSQDFAINGVTIGQVAYKDGDGNGALVSAINSVKDTTGVEASKDANGQLVLTSRDGRGIKIDGNIGGG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 310 AG---------GMRSLMQEMAKDGTTLDSSLQkLLGMTQAQFETRVQNDGASYIDNMDLTNNDLGGIGAFDADNLGI--- 377
Cdd:PRK13589 317 AGilanmkenyGRLSLVKNDGKDILISGTNLS-AIGMGATDMISQASVSLRESKGRIDANIADAMGFNSYKGGGKFVvtg 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 378 -----------------RNAADAVGDAFSYAEQPLEGFKLDWSAAGFTPAEKKTF--TFQTGSNSGERSNFTIRGGSAER 438
Cdd:PRK13589 396 gfssvsafmssegsgfsRGSGYSVGSGKNYSVGLSQGIQIISSASAMSTVYNVSAgsGFSSGSGLSQFATMKTTAAGVKD 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 439 iGLAGVNVSANARGSIAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQ 518
Cdd:PRK13589 476 -ETAGVTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILA 554
|
570 580
....*....|....*....|.
gi 654847818 519 QAASSVLAQANQSPNIALSLL 539
Cdd:PRK13589 555 QSGSYAMSQANAVQQNVLKLL 575
|
|
| PRK12808 |
PRK12808 |
flagellin; Provisional |
4-539 |
1.81e-17 |
|
flagellin; Provisional
Pssm-ID: 237212 [Multi-domain] Cd Length: 476 Bit Score: 85.01 E-value: 1.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKGTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSE 83
Cdd:PRK12808 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 84 ITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETPLldgpegnftaNSDQDIfarvtgmmeq 163
Cdd:PRK12808 83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNLL----------NSNSSI---------- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 164 aeaNIKahyglvgdgedtfqmlisnydgagnvvafvssspgnvssmTLDRDDFNGSIpNIDriIEHEMVHAVMRNQITSA 243
Cdd:PRK12808 143 ---NIQ----------------------------------------TLDSSDGDKQI-GID--LKSATLEALGINDLSIG 176
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 244 MPLWFTEGTAELIHGADDRLSADLAAAgsstalMAAWDGAADDSADYSRAYV-AARMLHDDLKEAGHAGGMRSLMQEMAK 322
Cdd:PRK12808 177 ANTDIEAVSTKIAALDKNTIAKATVEA------KAAFDKAKDDTKAEDSNILdAAADGFKDGKADDAAKDVEAIKTALSA 250
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 323 DGTTLDSSLQKLLGmtqAQFETRVQNDGASYIDNMDLTNNDLGGIGAFDADNLGIRNAADAVgDAFSYAEQPLEG---FK 399
Cdd:PRK12808 251 FTGAATLEEAEAAK---TAFEVAQKDLVDTYTKKAALTKDAVADLDTAKTTSTRSKAAKDLV-AAYDKAKSGAKPndvAK 326
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 400 LDWSAAGFTPAEKKTFT-FQTGSNSGERSNFTIRGGSAERIGL--------AGVNVSANARGSIAIVDKALKNIHEIRRE 470
Cdd:PRK12808 327 AYLEAKMAYEKDNNAIDgKSKLEAADDALEKDAIKTDASKVLVpkleaakkATTNSKADSLDAVKAIDEALKTVADNRAT 406
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654847818 471 IGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLL 539
Cdd:PRK12808 407 LGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 475
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
4-539 |
8.61e-17 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 83.38 E-value: 8.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 4 VNTNVNALKG-TNHLSNVTErMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMS 82
Cdd:PRK13588 5 INTNIAALNAhAVGVQNNRD-LSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 83 EITDIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINAANRVAEGANLGGETpLLDGPEGN----FTANSDQDIFARVT 158
Cdd:PRK13588 84 EQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQ-MLSGSFSNkefqIGAYSNTTVKASIG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 159 GM---------MEQAEANIKAHYGLVGDGEDT-FQMLISNYDGAGNVvafvssSPGNVSSMTLDRDDFNGSIPNIDRIIE 228
Cdd:PRK13588 163 ATssdkighvrMETSSFSGEGMLASAAAQNLTeVGLNFKQVDGVNDY------KIETVRISTSAGTGIGALSEIINRFSD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 229 HEMVHAVMRNQITSAMPLWFTEGTAELIHGADDRLSADLAAAGSSTALMAAWDGAADDSADYSRAYVAARM--------- 299
Cdd:PRK13588 237 TLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQGRInltsidgra 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 300 --LHDDlKEAGHAGGMRSLMQEMAKDgttldsslQKLLGMTqaqfeTRVQNDGASYIdnmdLTNNDLGGIGAFDADnlGI 377
Cdd:PRK13588 317 isVHAA-SASGQVFGGGNFAGISGTQ--------HAVVGRL-----TLTRTDARDII----VSGVNFSHVGFHSAQ--GV 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 378 RNAADAVGDAFSYAEQPLEgfkldwSAAGFTPAEKKTFTFQTGSNsgersnftirggsaeriglAGVNVSANARGSIAIV 457
Cdd:PRK13588 377 AEYTVNLRAVRGIFDANVA------SAAGANANGAQAETNSQGIG-------------------AGVTSLKGAMIVMDMA 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 458 DKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALS 537
Cdd:PRK13588 432 ESARTQLDKIRSDMGSVQMQLVSTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLR 511
|
..
gi 654847818 538 LL 539
Cdd:PRK13588 512 LL 513
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
9-121 |
5.98e-15 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 77.03 E-value: 5.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 9 NALKGTNHLSNVTE---RMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSEIT 85
Cdd:PRK06663 6 HPMQYNNLKSSLRRqesKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYLQSIT 85
|
90 100 110
....*....|....*....|....*....|....*.
gi 654847818 86 DIAHRMRQLSVQMSSNTLSQDDRDGAQLEIEELINA 121
Cdd:PRK06663 86 NILQRARELAVQGANGTYQADDKKKIAKEIDELLED 121
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
447-540 |
1.12e-14 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 73.75 E-value: 1.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 447 SANARGSIAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLA 526
Cdd:COG1344 154 AGQRTAALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALA 233
|
90
....*....|....
gi 654847818 527 QANQSPniALSLLG 540
Cdd:COG1344 234 QANQLS--LLDLLR 245
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
454-539 |
3.18e-14 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 68.13 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 454 IAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPN 533
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80
|
....*.
gi 654847818 534 IALSLL 539
Cdd:pfam00700 81 SLLNLL 86
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
15-123 |
3.20e-14 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 73.49 E-value: 3.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 15 NHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSEITDIAHRMRQL 94
Cdd:PRK07701 14 RNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQATDILQRAREL 93
|
90 100 110
....*....|....*....|....*....|...
gi 654847818 95 SVQMSSNTLSQDDRDGAQLEIEEL----INAAN 123
Cdd:PRK07701 94 AVQAANGTNTQTDRQAIAQEIEQLkeqlIQIAN 126
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
404-539 |
4.28e-14 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 73.11 E-value: 4.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 404 AAGFTPAEKKTFTFQTGSNSGERSNFTIRGGSAERIGLAGV-------------------NVSANARGS----IAIVDKA 460
Cdd:PRK12804 142 KPAAPAAGTKSLTFQIGANAAQQLSVNIEAMSADALGVKDTdgtlvtgksvsdidvtkfaNAAAAADGGfddqLKIVDGA 221
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654847818 461 LKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIALSLL 539
Cdd:PRK12804 222 IKQVSDQRSKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLL 300
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
13-123 |
9.49e-09 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 57.61 E-value: 9.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 13 GTNHLSNVTERMNRSFEQLSSGSRINSARDD-AAGLQISNrLDTQLIGTRQANRNIQDGISALQIADGAMSEITDIAHRM 91
Cdd:PRK08870 12 SVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDpVAAAQAVN-LSQQSALLDQYTKNINLARNRLQQEESTLGSVEDLLQRA 90
|
90 100 110
....*....|....*....|....*....|....*.
gi 654847818 92 RQLSVQMSSNTLSQDDRD--GAQLE--IEELINAAN 123
Cdd:PRK08870 91 RELVVQAGNGSLSDSDRQaiATELQglRDQLLNLAN 126
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
447-539 |
9.40e-08 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 53.67 E-value: 9.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 447 SANARGSIAIVDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLA 526
Cdd:PRK12807 194 AASALAAISALNTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLS 273
|
90
....*....|...
gi 654847818 527 QANQSPNIALSLL 539
Cdd:PRK12807 274 QANQTPQMVSKLL 286
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
458-539 |
7.43e-06 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 48.11 E-value: 7.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 458 DKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQspniaLS 537
Cdd:TIGR02550 227 DKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ-----LS 301
|
..
gi 654847818 538 LL 539
Cdd:TIGR02550 302 LF 303
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
457-527 |
1.43e-05 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 47.60 E-value: 1.43e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 654847818 457 VDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQ 527
Cdd:PRK08870 324 LDNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQAAQQAFSK 394
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
24-151 |
1.71e-05 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 47.43 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 24 MNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSEITDIAHRMRQLSVQMSSNTL 103
Cdd:PRK12717 23 LVKTQEQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELAVSAGNGGL 102
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 654847818 104 SQDDRDGAQLEIEE-------LINAANRVAE---GANLGGETPLLDGPEGNFTANSDQ 151
Cdd:PRK12717 103 TDADRKAIASELKQieaqllgLMNSKDANGQylfAGSKSDTPPYVRNADGTYSYQGDQ 160
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
457-539 |
3.80e-05 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 45.63 E-value: 3.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 457 VDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQSPNIAL 536
Cdd:PRK12805 203 IDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLT 282
|
...
gi 654847818 537 SLL 539
Cdd:PRK12805 283 QLI 285
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
457-539 |
9.26e-05 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 44.62 E-value: 9.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 457 VDKALKNIHEIRREIGGAMAEMESMLRNNSTMVVNVSDSKSRITDTDFASATAELTRNQIIQQAASSVLAQANQspniaL 536
Cdd:PRK07192 225 IDDALDNVLTVRTELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDYAEALSDLSNQMAALEAAQKTFVKINS-----L 299
|
...
gi 654847818 537 SLL 539
Cdd:PRK07192 300 SLF 302
|
|
| PRK14692 |
PRK14692 |
flagellar hook-associated protein FlgL; |
9-171 |
1.12e-03 |
|
flagellar hook-associated protein FlgL;
Pssm-ID: 173155 [Multi-domain] Cd Length: 749 Bit Score: 41.87 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 9 NALKGTNHLSNVTERM---NRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSEIT 85
Cdd:PRK14692 5 NKLNFTNSVNNSMGGQsalYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 86 DIAHRMRQLSVQMSSNTLSQDDRDGAQLEIE----ELINAANRVAEGANLGGETPLLDGP---EGNFTANSDqDIFArVT 158
Cdd:PRK14692 85 KLLEDFKVKVTQAASDSNSQTSREAIAKELErikeSIVQLANTSVNGQYLFAGSQVANKPfdsNGNYYGDKN-NINV-VT 162
|
170
....*....|...
gi 654847818 159 GMMEQAEANIKAH 171
Cdd:PRK14692 163 GAGTESPYNIPGW 175
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
13-185 |
1.54e-03 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 40.77 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 13 GTNHLSNVTERMNRSFEQLSSGSRINSARDDAAGLQISNRLDTQLIGTRQANRNIQDGISALQIADGAMSEITDIAHRMR 92
Cdd:PRK07192 12 MLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSGVNDQLQSIR 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654847818 93 QLSVQMSSNTLSQDDRDGAQLEI----EELINAAN-RVAEG----ANLGGETP--LLDGPEGNFTANSDQDIFARVTGMM 161
Cdd:PRK07192 92 SLLVAAGNGSLSDEDRSAMATELrsmlDSLLGLANaKDSEGnylfSGTASNTQpiTFDAAGGTYTYNGNSDQRQVQVGEG 171
|
170 180
....*....|....*....|....
gi 654847818 162 EQAEANIKAHYGLVGDGEDTFQML 185
Cdd:PRK07192 172 VQMPVNVTGQSVFQGGGLDVFNTL 195
|
|
| |
