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Conserved domains on  [gi|550714884|ref|WP_022647773|]
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MULTISPECIES: DUF2543 family protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2543 super family cl12409
Protein of unknown function (DUF2543); This family of proteins with unknown function appear to ...
 1-81 5.52e-39

Protein of unknown function (DUF2543); This family of proteins with unknown function appear to be restricted to Enterobacteriaceae. The family has a highly conserved sequence.


The actual alignment was detected with superfamily member pfam10820:

Pssm-ID: 431510  Cd Length: 81  Bit Score: 123.90  E-value: 5.52e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714884   1 MTHDIPLKYYDIVDEYATETAKPPEEAERTPLAHYFQLLLTRLYNNEEISEEAQREMAVQAEIDEARIDDIANFLNQWGN 80
Cdd:pfam10820  1 MNNDVPLKYYDIADEYATESAEPVEEQERDGLAHYFQLLITRLTNNEEISEEAQKEMAAEAGINEQRIDDIAEFLNQWGN 80


                 .
gi 550714884  81 E 81
Cdd:pfam10820 81 E 81
 
Name Accession Description Interval E-value
DUF2543 pfam10820
Protein of unknown function (DUF2543); This family of proteins with unknown function appear to ...
 1-81 5.52e-39

Protein of unknown function (DUF2543); This family of proteins with unknown function appear to be restricted to Enterobacteriaceae. The family has a highly conserved sequence.


Pssm-ID: 431510  Cd Length: 81  Bit Score: 123.90  E-value: 5.52e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714884   1 MTHDIPLKYYDIVDEYATETAKPPEEAERTPLAHYFQLLLTRLYNNEEISEEAQREMAVQAEIDEARIDDIANFLNQWGN 80
Cdd:pfam10820  1 MNNDVPLKYYDIADEYATESAEPVEEQERDGLAHYFQLLITRLTNNEEISEEAQKEMAAEAGINEQRIDDIAEFLNQWGN 80


                 .
gi 550714884  81 E 81
Cdd:pfam10820 81 E 81
PRK08304 PRK08304
stage V sporulation protein AD; Validated
 17-77 2.01e-03

stage V sporulation protein AD; Validated


Pssm-ID: 236230  Cd Length: 337  Bit Score: 34.82  E-value: 2.01e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714884  17 ATETAKPPEEAErTPLAHYFQLLLTRLYNNEEISEEAQREM---AVQ-----AEIDEARIDDI--ANFLNQ 77
Cdd:PRK08304  20 STGTIVGPKEGE-GPLGKYFDKILDDDYCGEKSWEKAERKMmedAIQqalqkANLKKSDIDYLlaGDLLNQ 89
 
Name Accession Description Interval E-value
DUF2543 pfam10820
Protein of unknown function (DUF2543); This family of proteins with unknown function appear to ...
 1-81 5.52e-39

Protein of unknown function (DUF2543); This family of proteins with unknown function appear to be restricted to Enterobacteriaceae. The family has a highly conserved sequence.


Pssm-ID: 431510  Cd Length: 81  Bit Score: 123.90  E-value: 5.52e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714884   1 MTHDIPLKYYDIVDEYATETAKPPEEAERTPLAHYFQLLLTRLYNNEEISEEAQREMAVQAEIDEARIDDIANFLNQWGN 80
Cdd:pfam10820  1 MNNDVPLKYYDIADEYATESAEPVEEQERDGLAHYFQLLITRLTNNEEISEEAQKEMAAEAGINEQRIDDIAEFLNQWGN 80


                 .
gi 550714884  81 E 81
Cdd:pfam10820 81 E 81
PRK08304 PRK08304
stage V sporulation protein AD; Validated
 17-77 2.01e-03

stage V sporulation protein AD; Validated


Pssm-ID: 236230  Cd Length: 337  Bit Score: 34.82  E-value: 2.01e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 550714884  17 ATETAKPPEEAErTPLAHYFQLLLTRLYNNEEISEEAQREM---AVQ-----AEIDEARIDDI--ANFLNQ 77
Cdd:PRK08304  20 STGTIVGPKEGE-GPLGKYFDKILDDDYCGEKSWEKAERKMmedAIQqalqkANLKKSDIDYLlaGDLLNQ 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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