|
Name |
Accession |
Description |
Interval |
E-value |
| Abhydrolase super family |
cl21494 |
alpha/beta hydrolases; A functionally diverse superfamily containing proteases, lipases, ... |
201-432 |
2.70e-61 |
|
alpha/beta hydrolases; A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine, and often the mechanism involves a nucleophilic attack on a carbonyl carbon atom.
The actual alignment was detected with superfamily member pfam08840:
Pssm-ID: 473884 [Multi-domain] Cd Length: 211 Bit Score: 202.51 E-value: 2.70e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 201 TPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGATFPEaVSAVIGYVPGAVVHSAQNaadpaigregptwLYR 280
Cdd:pfam08840 1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPL-------------VYK 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 281 GQPLPHLWEGNRTATWAPfdegpaPHRHERAIRTALQDADAVARARIRIERARGPVLLLSATDDGSWPSGDYSRMVTAKL 360
Cdd:pfam08840 67 DNPLPPLGEGMRRIKVNK------DGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERL 140
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544769559 361 AEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRIsTGGGEPRANARADAQSWVAVRRFLASAVAA 432
Cdd:pfam08840 141 QKHGKEVEVQLVCYPGAGHLIEPPYFPHCGASFHALVGMPV-LWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
|
|
| YciW1 |
COG4950 |
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown]; |
446-620 |
2.03e-58 |
|
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown];
:
Pssm-ID: 443977 Cd Length: 177 Bit Score: 193.99 E-value: 2.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 446 MDFTPAQDVVDQVAGLDDGSATHALRHAREKVATATQGSYDALFDTALPG-LTPGERLLVALYACRLTPAPELAEHYRAW 524
Cdd:COG4950 1 MTTATSPDVIDTLAGIAPGSALAALRAQRAKAREATQASYDALFSPALPGgLSLAERLAVALFVARLHGAQALAAHYAAR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 525 LAETPVDAtaLQAVDQGELEALTDPRLHAILTFTRTLIERPIEGDRAALQKLPAAGLATADVVTLAQLIAFLSYQTRLVA 604
Cdd:COG4950 81 LAPLPAPA--LAAAADPDAAAELDPRLAAALAHARLLTLRPREATPAALQALLDAGLSTPDIVTLSQLIAFVSYQARVVA 158
|
170
....*....|....*.
gi 544769559 605 GLRALNAAAGTNASAT 620
Cdd:COG4950 159 GLRALAGLPAAAAGAP 174
|
|
| Bile_Hydr_Trans |
pfam04775 |
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ... |
16-136 |
5.52e-31 |
|
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.
:
Pssm-ID: 461422 Cd Length: 127 Bit Score: 117.33 E-value: 5.52e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 16 DVQRRIVVTGLPPGAQVGIVAQTRRGNGVLWHSRAAFVADAQGTVDLTRDAPVSGDYTGISAMGLIWSQRPEDDKAREVF 95
Cdd:pfam04775 1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLY 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 96 PQPVTEPLTT-----TLTATANGESIHASFVQRL-AAPGVTRHEVRD 136
Cdd:pfam04775 81 KRDVLPTPFVvtlsvYDGSEESGKPLASVTVERWyMAPGVRRIEVRE 127
|
|
| Aes super family |
cl27028 |
Acetyl esterase/lipase [Lipid transport and metabolism]; |
142-255 |
1.07e-05 |
|
Acetyl esterase/lipase [Lipid transport and metabolism];
The actual alignment was detected with superfamily member COG0657:
Pssm-ID: 440422 [Multi-domain] Cd Length: 207 Bit Score: 46.79 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 142 TLYLPDAyaHPGPRPAVLILNGSG---GGIN--EPRAALYAS-HGYAAFALAYFKAPglsDYISNTPLEYFERALAWLRK 215
Cdd:COG0657 2 DVYRPAG--AKGPLPVVVYFHGGGwvsGSKDthDPLARRLAArAGAAVVSVDYRLAP---EHPFPAALEDAYAALRWLRA 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 216 RVEPLH---DFVAVSGQSRGGELALLLGATFPE----AVSAVIGYVP 255
Cdd:COG0657 77 NAAELGidpDRIAVAGDSAGGHLAAALALRARDrggpRPAAQVLIYP 123
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| BAAT_C |
pfam08840 |
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ... |
201-432 |
2.70e-61 |
|
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).
Pssm-ID: 430252 [Multi-domain] Cd Length: 211 Bit Score: 202.51 E-value: 2.70e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 201 TPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGATFPEaVSAVIGYVPGAVVHSAQNaadpaigregptwLYR 280
Cdd:pfam08840 1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPL-------------VYK 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 281 GQPLPHLWEGNRTATWAPfdegpaPHRHERAIRTALQDADAVARARIRIERARGPVLLLSATDDGSWPSGDYSRMVTAKL 360
Cdd:pfam08840 67 DNPLPPLGEGMRRIKVNK------DGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERL 140
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544769559 361 AEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRIsTGGGEPRANARADAQSWVAVRRFLASAVAA 432
Cdd:pfam08840 141 QKHGKEVEVQLVCYPGAGHLIEPPYFPHCGASFHALVGMPV-LWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
|
|
| YciW1 |
COG4950 |
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown]; |
446-620 |
2.03e-58 |
|
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown];
Pssm-ID: 443977 Cd Length: 177 Bit Score: 193.99 E-value: 2.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 446 MDFTPAQDVVDQVAGLDDGSATHALRHAREKVATATQGSYDALFDTALPG-LTPGERLLVALYACRLTPAPELAEHYRAW 524
Cdd:COG4950 1 MTTATSPDVIDTLAGIAPGSALAALRAQRAKAREATQASYDALFSPALPGgLSLAERLAVALFVARLHGAQALAAHYAAR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 525 LAETPVDAtaLQAVDQGELEALTDPRLHAILTFTRTLIERPIEGDRAALQKLPAAGLATADVVTLAQLIAFLSYQTRLVA 604
Cdd:COG4950 81 LAPLPAPA--LAAAADPDAAAELDPRLAAALAHARLLTLRPREATPAALQALLDAGLSTPDIVTLSQLIAFVSYQARVVA 158
|
170
....*....|....*.
gi 544769559 605 GLRALNAAAGTNASAT 620
Cdd:COG4950 159 GLRALAGLPAAAAGAP 174
|
|
| Bile_Hydr_Trans |
pfam04775 |
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ... |
16-136 |
5.52e-31 |
|
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.
Pssm-ID: 461422 Cd Length: 127 Bit Score: 117.33 E-value: 5.52e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 16 DVQRRIVVTGLPPGAQVGIVAQTRRGNGVLWHSRAAFVADAQGTVDLTRDAPVSGDYTGISAMGLIWSQRPEDDKAREVF 95
Cdd:pfam04775 1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLY 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 96 PQPVTEPLTT-----TLTATANGESIHASFVQRL-AAPGVTRHEVRD 136
Cdd:pfam04775 81 KRDVLPTPFVvtlsvYDGSEESGKPLASVTVERWyMAPGVRRIEVRE 127
|
|
| CMD_Avi_7170 |
TIGR04029 |
CMD domain protein, Avi_7170 family; Sequences in this family occur as the N-terminal domain ... |
453-609 |
3.65e-24 |
|
CMD domain protein, Avi_7170 family; Sequences in this family occur as the N-terminal domain of a fusion protein with a C-terminal peroxidase-like protein, or as discrete protein encoded next to a peroxidase-like protein. The two partners regularly are encoded near to, and in the same genomes as, a putative FMN-dependent luciferase-like monooxygenase (LLM) (TIGR04027), and an ABC transporter in which TIGR04028 models the substrate-binding protein. CDD identifies this family as falling within the CMD superfamily that includes carboxymuconolactone decarboxylase.
Pssm-ID: 213885 Cd Length: 174 Bit Score: 99.58 E-value: 3.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 453 DVVDQVAGLDDGSATHALRHAREKVATATQGSYDALFDTALPG-LTPGERLLVALYACRLTPAPELAEHYRAWLAETP-- 529
Cdd:TIGR04029 1 DLLDTLAEIAPDSPLAQARATRPAATDNAQRSYEALFEPADAGdFSLAERYAVATFVAGLHQDEALAAFYADLLQDEAap 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 530 ----VDATALQAVDQGELEALTD----------PRLHAILTFTRTLIERPIEGDRAALQKLPAAGLATADVVTLAQLIAF 595
Cdd:TIGR04029 81 lvaaIRAAIRRGASTGPYSVPGFlwrpdaaalgPRLAAALDHAHLLVFHPRDAAPQALGALTAAGWSADDIVTLSQLVAF 160
|
170
....*....|....
gi 544769559 596 LSYQTRLVAGLRAL 609
Cdd:TIGR04029 161 LSFQSRLLRGLRVL 174
|
|
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
139-387 |
2.59e-10 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 60.80 E-value: 2.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 139 LVGTLYLPdayAHPGPRPAVLILNGSGGGINE---PRAALYASHGYAAFALAYFKAPGLSDYISNTPLEYFERALAWLRK 215
Cdd:COG1506 10 LPGWLYLP---ADGKKYPVVVYVHGGPGSRDDsflPLAQALASRGYAVLAPDYRGYGESAGDWGGDEVDDVLAAIDYLAA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 216 RVEPLHDFVAVSGQSRGGELALLLGATFPEAVSAVIGYVPgavVHSAQNAAdpaigreGPTWLYRGQPLPHLWEgnRTAT 295
Cdd:COG1506 87 RPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAG---VSDLRSYY-------GTTREYTERLMGGPWE--DPEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 296 WAPFDegpaPHRHERAIRTalqdadavararirierargPVLLLSATDDGSWPSGDYSRMVTAKlaeVRHPYPVQHFDYE 375
Cdd:COG1506 155 YAARS----PLAYADKLKT--------------------PLLLIHGEADDRVPPEQAERLYEAL---KKAGKPVELLVYP 207
|
250
....*....|..
gi 544769559 376 GAGHAIVFPYVP 387
Cdd:COG1506 208 GEGHGFSGAGAP 219
|
|
| Aes |
COG0657 |
Acetyl esterase/lipase [Lipid transport and metabolism]; |
142-255 |
1.07e-05 |
|
Acetyl esterase/lipase [Lipid transport and metabolism];
Pssm-ID: 440422 [Multi-domain] Cd Length: 207 Bit Score: 46.79 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 142 TLYLPDAyaHPGPRPAVLILNGSG---GGIN--EPRAALYAS-HGYAAFALAYFKAPglsDYISNTPLEYFERALAWLRK 215
Cdd:COG0657 2 DVYRPAG--AKGPLPVVVYFHGGGwvsGSKDthDPLARRLAArAGAAVVSVDYRLAP---EHPFPAALEDAYAALRWLRA 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 216 RVEPLH---DFVAVSGQSRGGELALLLGATFPE----AVSAVIGYVP 255
Cdd:COG0657 77 NAAELGidpDRIAVAGDSAGGHLAAALALRARDrggpRPAAQVLIYP 123
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| BAAT_C |
pfam08840 |
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ... |
201-432 |
2.70e-61 |
|
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).
Pssm-ID: 430252 [Multi-domain] Cd Length: 211 Bit Score: 202.51 E-value: 2.70e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 201 TPLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGATFPEaVSAVIGYVPGAVVHSAQNaadpaigregptwLYR 280
Cdd:pfam08840 1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPL-------------VYK 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 281 GQPLPHLWEGNRTATWAPfdegpaPHRHERAIRTALQDADAVARARIRIERARGPVLLLSATDDGSWPSGDYSRMVTAKL 360
Cdd:pfam08840 67 DNPLPPLGEGMRRIKVNK------DGLLDIRDMFNDPLSKPDPKSLIPVERAKGPFLFVVGQDDHNWPSVFYAKKACERL 140
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544769559 361 AEVRHPYPVQHFDYEGAGHAIVFPYVPTTQLVYAHPVSGRIsTGGGEPRANARADAQSWVAVRRFLASAVAA 432
Cdd:pfam08840 141 QKHGKEVEVQLVCYPGAGHLIEPPYFPHCGASFHALVGMPV-LWGGEPKAHAKAQEDAWKKIQAFFHKHLGG 211
|
|
| YciW1 |
COG4950 |
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown]; |
446-620 |
2.03e-58 |
|
N-terminal domain of uncharacterized protein YciW (function unknown) [Function unknown];
Pssm-ID: 443977 Cd Length: 177 Bit Score: 193.99 E-value: 2.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 446 MDFTPAQDVVDQVAGLDDGSATHALRHAREKVATATQGSYDALFDTALPG-LTPGERLLVALYACRLTPAPELAEHYRAW 524
Cdd:COG4950 1 MTTATSPDVIDTLAGIAPGSALAALRAQRAKAREATQASYDALFSPALPGgLSLAERLAVALFVARLHGAQALAAHYAAR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 525 LAETPVDAtaLQAVDQGELEALTDPRLHAILTFTRTLIERPIEGDRAALQKLPAAGLATADVVTLAQLIAFLSYQTRLVA 604
Cdd:COG4950 81 LAPLPAPA--LAAAADPDAAAELDPRLAAALAHARLLTLRPREATPAALQALLDAGLSTPDIVTLSQLIAFVSYQARVVA 158
|
170
....*....|....*.
gi 544769559 605 GLRALNAAAGTNASAT 620
Cdd:COG4950 159 GLRALAGLPAAAAGAP 174
|
|
| Bile_Hydr_Trans |
pfam04775 |
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ... |
16-136 |
5.52e-31 |
|
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.
Pssm-ID: 461422 Cd Length: 127 Bit Score: 117.33 E-value: 5.52e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 16 DVQRRIVVTGLPPGAQVGIVAQTRRGNGVLWHSRAAFVADAQGTVDLTRDAPVSGDYTGISAMGLIWSQRPEDDKAREVF 95
Cdd:pfam04775 1 DEPVHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLY 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 96 PQPVTEPLTT-----TLTATANGESIHASFVQRL-AAPGVTRHEVRD 136
Cdd:pfam04775 81 KRDVLPTPFVvtlsvYDGSEESGKPLASVTVERWyMAPGVRRIEVRE 127
|
|
| CMD_Avi_7170 |
TIGR04029 |
CMD domain protein, Avi_7170 family; Sequences in this family occur as the N-terminal domain ... |
453-609 |
3.65e-24 |
|
CMD domain protein, Avi_7170 family; Sequences in this family occur as the N-terminal domain of a fusion protein with a C-terminal peroxidase-like protein, or as discrete protein encoded next to a peroxidase-like protein. The two partners regularly are encoded near to, and in the same genomes as, a putative FMN-dependent luciferase-like monooxygenase (LLM) (TIGR04027), and an ABC transporter in which TIGR04028 models the substrate-binding protein. CDD identifies this family as falling within the CMD superfamily that includes carboxymuconolactone decarboxylase.
Pssm-ID: 213885 Cd Length: 174 Bit Score: 99.58 E-value: 3.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 453 DVVDQVAGLDDGSATHALRHAREKVATATQGSYDALFDTALPG-LTPGERLLVALYACRLTPAPELAEHYRAWLAETP-- 529
Cdd:TIGR04029 1 DLLDTLAEIAPDSPLAQARATRPAATDNAQRSYEALFEPADAGdFSLAERYAVATFVAGLHQDEALAAFYADLLQDEAap 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 530 ----VDATALQAVDQGELEALTD----------PRLHAILTFTRTLIERPIEGDRAALQKLPAAGLATADVVTLAQLIAF 595
Cdd:TIGR04029 81 lvaaIRAAIRRGASTGPYSVPGFlwrpdaaalgPRLAAALDHAHLLVFHPRDAAPQALGALTAAGWSADDIVTLSQLVAF 160
|
170
....*....|....
gi 544769559 596 LSYQTRLVAGLRAL 609
Cdd:TIGR04029 161 LSFQSRLLRGLRVL 174
|
|
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
139-387 |
2.59e-10 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 60.80 E-value: 2.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 139 LVGTLYLPdayAHPGPRPAVLILNGSGGGINE---PRAALYASHGYAAFALAYFKAPGLSDYISNTPLEYFERALAWLRK 215
Cdd:COG1506 10 LPGWLYLP---ADGKKYPVVVYVHGGPGSRDDsflPLAQALASRGYAVLAPDYRGYGESAGDWGGDEVDDVLAAIDYLAA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 216 RVEPLHDFVAVSGQSRGGELALLLGATFPEAVSAVIGYVPgavVHSAQNAAdpaigreGPTWLYRGQPLPHLWEgnRTAT 295
Cdd:COG1506 87 RPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAG---VSDLRSYY-------GTTREYTERLMGGPWE--DPEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 296 WAPFDegpaPHRHERAIRTalqdadavararirierargPVLLLSATDDGSWPSGDYSRMVTAKlaeVRHPYPVQHFDYE 375
Cdd:COG1506 155 YAARS----PLAYADKLKT--------------------PLLLIHGEADDRVPPEQAERLYEAL---KKAGKPVELLVYP 207
|
250
....*....|..
gi 544769559 376 GAGHAIVFPYVP 387
Cdd:COG1506 208 GEGHGFSGAGAP 219
|
|
| DLH |
COG0412 |
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; |
136-267 |
1.14e-08 |
|
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440181 [Multi-domain] Cd Length: 226 Bit Score: 55.74 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 136 DEGLVGTLYLPDAyahPGPRPAVLILNGSGGgINEP---RAALYASHGYAAFALAYFKAPGLSDYIS-----------NT 201
Cdd:COG0412 13 GVTLPGYLARPAG---GGPRPGVVVLHEIFG-LNPHirdVARRLAAAGYVVLAPDLYGRGGPGDDPDearalmgaldpEL 88
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 544769559 202 PLEYFERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGATFPEaVSAVIGYVPGAVVHSAQNAAD 267
Cdd:COG0412 89 LAADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPD-LAAAVSFYGGLPADDLLDLAA 153
|
|
| YciW |
COG2128 |
Alkylhydroperoxidase family enzyme, contains CxxC motif [Inorganic ion transport and ... |
474-607 |
3.29e-07 |
|
Alkylhydroperoxidase family enzyme, contains CxxC motif [Inorganic ion transport and metabolism];
Pssm-ID: 441731 [Multi-domain] Cd Length: 142 Bit Score: 49.88 E-value: 3.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 474 REKVATATQGSYDALFDTAlpGLTPGERLLVALYACRLTPAP-ELAEHYRAWLAETpVDATALQAVDQGELEALTDPRLH 552
Cdd:COG2128 2 SPELLKAFLALSGALMAKG--GLSPRERELVALRVSQINGCAyCLDAHTAIARKAG-LDEERIDALRAWRESPLFDPRER 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 544769559 553 AILTFTRTLIERPIEGDRAALQKLpAAGLATADVVTLAQLIAFLSYQTRLVAGLR 607
Cdd:COG2128 79 AALAFAEALTRTPGGVSDADVAAL-RAGFSDAEIVELVLAIALFNMSNRLNNALG 132
|
|
| peroxid_rel |
TIGR01926 |
uncharacterized peroxidase-related enzyme; This protein family with length of about 200 amino ... |
485-606 |
3.46e-07 |
|
uncharacterized peroxidase-related enzyme; This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.
Pssm-ID: 130981 [Multi-domain] Cd Length: 177 Bit Score: 50.49 E-value: 3.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 485 YDALFDtALPGLTPGERLLVALYACRLTPAPELAEHYRAWLAETPVDATALQAVDQGELEALTDPRLHAILTFTRTLIER 564
Cdd:TIGR01926 50 FNDLML-GEGGLSRAERELIAVVVSRANGCVYCAAVHGAALRQLSGDPDLADAVAVNFRDADLSPRERAMLDFAVKLTAT 128
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 544769559 565 PIEGDRAALQKLPAAGLATADVVTLAQLIAFLSYQTRLVAGL 606
Cdd:TIGR01926 129 PAKVNEADFAALRAAGFSDLDILDLIHSVAFFNWANRLMLAL 170
|
|
| Aes |
COG0657 |
Acetyl esterase/lipase [Lipid transport and metabolism]; |
142-255 |
1.07e-05 |
|
Acetyl esterase/lipase [Lipid transport and metabolism];
Pssm-ID: 440422 [Multi-domain] Cd Length: 207 Bit Score: 46.79 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 142 TLYLPDAyaHPGPRPAVLILNGSG---GGIN--EPRAALYAS-HGYAAFALAYFKAPglsDYISNTPLEYFERALAWLRK 215
Cdd:COG0657 2 DVYRPAG--AKGPLPVVVYFHGGGwvsGSKDthDPLARRLAArAGAAVVSVDYRLAP---EHPFPAALEDAYAALRWLRA 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 544769559 216 RVEPLH---DFVAVSGQSRGGELALLLGATFPE----AVSAVIGYVP 255
Cdd:COG0657 77 NAAELGidpDRIAVAGDSAGGHLAAALALRARDrggpRPAAQVLIYP 123
|
|
| YvaK |
COG1647 |
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism]; |
145-251 |
4.33e-05 |
|
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 441253 [Multi-domain] Cd Length: 246 Bit Score: 45.32 E-value: 4.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 145 LPDAYAHPGPRPAVLILNGSGGGINE--PRAALYASHGYAAFALAY---------FKAPGLSDYIsntplEYFERALAWL 213
Cdd:COG1647 5 GAEPFFLEGGRKGVLLLHGFTGSPAEmrPLAEALAKAGYTVYAPRLpghgtspedLLKTTWEDWL-----EDVEEAYEIL 79
|
90 100 110
....*....|....*....|....*....|....*...
gi 544769559 214 RKRVEPlhdfVAVSGQSRGGELALLLGATFPEaVSAVI 251
Cdd:COG1647 80 KAGYDK----VIVIGLSMGGLLALLLAARYPD-VAGLV 112
|
|
| COG4099 |
COG4099 |
Predicted peptidase [General function prediction only]; |
143-280 |
1.18e-04 |
|
Predicted peptidase [General function prediction only];
Pssm-ID: 443275 [Multi-domain] Cd Length: 235 Bit Score: 43.80 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 143 LYLPDAYAHPGPRPAVLILNGSGGGINEPRAALYasHGYAAFAL----AYFKA-------PGLSDYISNTPLEYFERALA 211
Cdd:COG4099 37 LYLPKGYDPGKKYPLVLFLHGAGERGTDNEKQLT--HGAPKFINpenqAKFPAivlapqcPEDDYWSDTKALDAVLALLD 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 212 WLRK--RVEPlhDFVAVSGQSRGGELALLLGATFPE---AVSAVIGYVPGAVVHSAQN--------AADPAIGREGPTWL 278
Cdd:COG4099 115 DLIAeyRIDP--DRIYLTGLSMGGYGTWDLAARYPDlfaAAVPICGGGDPANAANLKKvpvwifhgAKDDVVPVEESRAM 192
|
..
gi 544769559 279 YR 280
Cdd:COG4099 193 VE 194
|
|
| perox_Avi_7169 |
TIGR04030 |
alkylhydroperoxidase domain protein, Avi_7169 family; Members of this family represent a ... |
487-606 |
1.72e-04 |
|
alkylhydroperoxidase domain protein, Avi_7169 family; Members of this family represent a narrow clade that falls within a family of alkylhydroperoxidase-related proteins, fused to or adjacent to a sequence described by TIGR04029. These two partners occur almost always in the context of a putative FMN-dependent luciferase-like monooxygenase (LLM) (TIGR04027), and an ABC transporter in which TIGR04028 models the substrate-binding protein.
Pssm-ID: 188545 Cd Length: 185 Bit Score: 42.85 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 487 ALFDTALPGLTPGERLLVALYACRLTPAPELAEHYRAWLAETPVDATALQAV-DQGELEALTDPRLHAILTFTRTLIERP 565
Cdd:TIGR04030 62 DIFYNPGGGLPRAERELAATVTSRYNGCIYCASVHARKASQLSKRRDDVQRLlDVGPGADLGSERWQAIIDAAAALSATP 141
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 544769559 566 IEGDRAALQKLPAAGLATADVVTLAQLIAFLSYQTRLVAGL 606
Cdd:TIGR04030 142 AAFNAAHVAALRAQGLDDLAIVDLIQSAAFFNWANRLMLTL 182
|
|
| Abhydrolase_1 |
pfam00561 |
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes. |
156-321 |
1.07e-03 |
|
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
Pssm-ID: 395444 [Multi-domain] Cd Length: 245 Bit Score: 41.34 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 156 PAVLILNGSGGGINEPRAALY--ASHGYAAFALAYF------KAPGLSDYisntPLEYFERALAWLRKRVePLHDFVAVs 227
Cdd:pfam00561 1 PPVLLLHGLPGSSDLWRKLAPalARDGFRVIALDLRgfgkssRPKAQDDY----RTDDLAEDLEYILEAL-GLEKVNLV- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 228 GQSRGGELALLLGATFPEAVSAVIGYVPGAVVHSAQNAADPAigREGPTWLYRGQPLPHlwEGNRTATWAPFDEGPAPHR 307
Cdd:pfam00561 75 GHSMGGLIALAYAAKYPDRVKALVLLGALDPPHELDEADRFI--LALFPGFFDGFVADF--APNPLGRLVAKLLALLLLR 150
|
170
....*....|....
gi 544769559 308 HERAIRTALQDADA 321
Cdd:pfam00561 151 LRLLKALPLLNKRF 164
|
|
| Fes |
COG2382 |
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism]; |
129-256 |
4.43e-03 |
|
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
Pssm-ID: 441948 [Multi-domain] Cd Length: 314 Bit Score: 39.45 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 129 VTRHEVRDEGLVGT----LYLPDAYAHPGPRPAVLILN-GSG---------GGINEPRAALYASHGYAAFALAYFKAPGL 194
Cdd:COG2382 81 VETVTYPSKALGRTrrvwVYLPPGYDNPGKKYPVLYLLdGGGgdeqdwfdqGRLPTILDNLIAAGKIPPMIVVMPDGGDG 160
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 195 SDYISN-TPLEYFERALA-----WLRK--RVEPLHDFVAVSGQSRGGELALLLGATFPEAVSAVIGYVPG 256
Cdd:COG2382 161 GDRGTEgPGNDAFERFLAeelipFVEKnyRVSADPEHRAIAGLSMGGLAALYAALRHPDLFGYVGSFSGS 230
|
|
| PldB |
COG2267 |
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]; |
139-251 |
5.47e-03 |
|
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
Pssm-ID: 441868 [Multi-domain] Cd Length: 221 Bit Score: 38.83 E-value: 5.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 139 LVGTLYLPDayahPGPRPAVLILNGSGGGIN--EPRAALYASHGYAAFAL---AYFKAPGLSDYISNTP--LEYFERALA 211
Cdd:COG2267 16 LRGRRWRPA----GSPRGTVVLVHGLGEHSGryAELAEALAAAGYAVLAFdlrGHGRSDGPRGHVDSFDdyVDDLRAALD 91
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 544769559 212 WLRKRV-EPLHdfvaVSGQSRGGELALLLGATFPEAVSAVI 251
Cdd:COG2267 92 ALRARPgLPVV----LLGHSMGGLIALLYAARYPDRVAGLV 128
|
|
| Axe1 |
COG3458 |
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ... |
150-241 |
9.69e-03 |
|
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442681 [Multi-domain] Cd Length: 318 Bit Score: 38.63 E-value: 9.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544769559 150 AHPGPRPAVLILNGSGGGINEPRAAL-YASHGYAAFAL---------------AYFKAPGLSDYISN---TPLEYF---- 206
Cdd:COG3458 77 KGEGPLPAVVEFHGYGGGRGLPHEDLdWAAAGYAVLVMdtrgqgsswgdtpdpGGYSGGALPGYMTRgidDPDTYYyrrv 156
|
90 100 110
....*....|....*....|....*....|....*....
gi 544769559 207 ----ERALAWLRKRVEPLHDFVAVSGQSRGGELALLLGA 241
Cdd:COG3458 157 yldaVRAVDALRSLPEVDGKRIGVTGGSQGGGLALAAAA 195
|
|
| |
