|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
14-612 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1087.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 14 GINGQAYPIIDHTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGPDNWKWHMYDTVK 93
Cdd:PTZ00139 17 GHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVK 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 94 GSDWLGDQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTDFGKGPPAQRTCAAADRTGHAILHTLYGQA 173
Cdd:PTZ00139 97 GSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQS 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 174 LRYNTEFFIEYFAIDLIM-EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPL 252
Cdd:PTZ00139 177 LKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 253 QDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQKDHINLH 332
Cdd:PTZ00139 257 QDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCGPNKDHIYLD 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 333 LDHLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQGGDPDVVVPGLMAIGEAACVSV 412
Cdd:PTZ00139 337 LTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASV 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 413 HGANRLGSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVY 492
Cdd:PTZ00139 417 HGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAVF 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 493 RTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWM 572
Cdd:PTZ00139 497 RIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWM 576
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 519018380 573 KHTLASIDDHAR-KVEIDYRPVHSYTMTNEMAYIEPKARVY 612
Cdd:PTZ00139 577 KHTLSYIRDVKKgKVRLTYRPVITTPLDNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
11-612 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1058.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 11 AAPGINGQAYPIIDHTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGPDNWKWHMYD 90
Cdd:PLN00128 35 FSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYD 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 91 TVKGSDWLGDQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTDFGKGPPAQRTCAAADRTGHAILHTLY 170
Cdd:PLN00128 115 TVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLY 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 171 GQALRYNTEFFIEYFAIDLIM-EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAG 249
Cdd:PLN00128 195 GQAMKHNTQFFVEYFALDLIMdSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 250 LPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQKDHI 329
Cdd:PLN00128 275 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHI 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 330 NLHLDHLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQGGDPDVVVPGLMAIGEAAC 409
Cdd:PLN00128 355 YLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAAC 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 410 VSVHGANRLGSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNC 489
Cdd:PLN00128 435 ASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNA 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 490 AVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDK 569
Cdd:PLN00128 515 AVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDE 594
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 519018380 570 TWMKHTLASIDDhaRKVEIDYRPVHSYTMTNEMAYIEPKARVY 612
Cdd:PLN00128 595 NWMKHTLGYWEE--GKVRLDYRPVHMNTLDDEVETFPPKARVY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
46-612 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 933.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 46 SQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGPDNWKWHMYDTVKGSDWLGDQDSIEYMVRNAPAAVYELEHWGVPF 125
Cdd:TIGR01816 2 AKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMPF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 126 SRTEDGRIYQRPFGGMTTDFGKGPPAQRTCAAADRTGHAILHTLYGQALRYNTEFFIEYFAIDLIMEEGRCRGVVCLKLD 205
Cdd:TIGR01816 82 SRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCLE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 206 DGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTN 285
Cdd:TIGR01816 162 TGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILIN 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 286 AEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQKDHINLHLDHLDPAILHERLPGISESAKIFAGVDVTKEPI 365
Cdd:TIGR01816 242 ANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDPI 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 366 PVLPTVHYNMGGIPTNYHGEVLTkQGGDPDVVVPGLMAIGEAACVSVHGANRLGSNSLIDLVVFGRAAALRAADVVTPGL 445
Cdd:TIGR01816 322 PVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 446 KQDDLPANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWN 525
Cdd:TIGR01816 401 DVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 526 SDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWMKHTLASIDDHARKVEIDYRPVHSYTMTNemAYI 605
Cdd:TIGR01816 481 TDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVDINTGKVLLSYKPVIFKPLTV--ADF 558
|
....*..
gi 519018380 606 EPKARVY 612
Cdd:TIGR01816 559 EPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
28-612 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 849.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGP-DNWKWHMYDTVKGSDWLGDQDSIEY 106
Cdd:TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPdDSWEWHAYDTVKGSDYLADQDAVEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 107 MVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTDfgkgppaqRTCAAADRTGHAILHTLYGQALRYNTEFFIEYFA 186
Cdd:TIGR01812 81 MCQEAPKAILELEHWGVPFSRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 IDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTGIY 266
Cdd:TIGR01812 153 LDLIHDDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 267 GAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQ-KDHINLHLDHLDPAILHERL 345
Cdd:TIGR01812 233 PSGILITEGCRGEGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGSPpGDYVYLDLRHLGEEKIEERL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 346 PGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQggdpdvVVPGLMAIGEAACVSVHGANRLGSNSLID 425
Cdd:TIGR01812 313 PQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVICET------IVKGLFAAGECACVSVHGANRLGGNSLLE 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 426 LVVFGRAAALRAAD-VVTPGLKQDDLPANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTGETLEEGSKL 504
Cdd:TIGR01812 387 LVVFGRIAGEAAAEyAAKTGNPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDE 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 505 IHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWMKHTLASIDDhAR 584
Cdd:TIGR01812 467 IEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDN-PG 545
|
570 580
....*....|....*....|....*...
gi 519018380 585 KVEIDYRPVhsyTMTNemayIEPKARVY 612
Cdd:TIGR01812 546 TPRLEYKPV---TITK----YEPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
26-593 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 621.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 26 TFDVVIVGAGGAGLRATVGCSQAG---LKTACISKVFPTRSHTVAAQGGVAASLANMGPDNWKWHMYDTVKGSDWLGDQD 102
Cdd:PRK06069 5 KYDVVIVGSGLAGLRAAVAAAERSggkLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 103 SIEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRY-NTEFF 181
Cdd:PRK06069 85 AVEVFVREAPEEIRFLDHWGVPWSRRPDGRISQRPFGGMSF--------PRTTFAADKTGFYIMHTLYSRALRFdNIHFY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 182 IEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFH 261
Cdd:PRK06069 157 DEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 262 PTGIYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQKD--HINLHLDHLDPA 339
Cdd:PRK06069 237 PTGLVPSGILITEAARGEGGYLINKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 340 ILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQGGdpdvVVPGLMAIGEAACVSVHGANRLG 419
Cdd:PRK06069 317 KINERLPLIREIAKKYAGIDPVTEPIPVRPAAHYTMGGIHTDVYGRVLTADGE----WVRGLWAAGEAAAVSVHGANRLG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 420 SNSLIDLVVFGRAAALRAADVVtpgLKQDDLPANSADHAL---ARL-DRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTG 495
Cdd:PRK06069 393 SNSTAECLVWGRIAGEQAAEYA---LKRPAPSSPVEKLAEkeeKRIfDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDE 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 496 ETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWMKHT 575
Cdd:PRK06069 470 SGLAEALKKIKKLRERYKNVRIEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHT 549
|
570
....*....|....*...
gi 519018380 576 LASIddHARKVEIDYRPV 593
Cdd:PRK06069 550 LAYY--TGGGPKVTYTPV 565
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
27-612 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 597.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAGGAGLRATVGCSQAG--LKTACISKVFPTRSHTVAAQGGVAASLANMGP-DNWKWHMYDTVKGSDWLGDQDS 103
Cdd:PRK05945 4 HDVVIVGGGLAGCRAALEIKRLDpsLDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPeDSWEAHAFDTVKGSDYLADQDA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 104 IEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTtdfgkgppAQRTCAAADRTGHAILHTLYGQALRYNTEFFIE 183
Cdd:PRK05945 84 VAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHS--------HNRTCYAADKTGHAILHELVNNLRRYGVTIYDE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 184 YFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPT 263
Cdd:PRK05945 156 WYVMRLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 264 GIYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVGKQ----KDHINLHLDHLDPA 339
Cdd:PRK05945 236 GLYPVGVLISEAVRGEGAYLINSEGDRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKE 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 340 ILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTkqggDPDVVVPGLMAIGEAACVSVHGANRLG 419
Cdd:PRK05945 316 KIMSRVPFCWEEAHRLVGVDAVTEPMPVRPTVHYCMGGIPVNTDGRVRR----SADGLVEGFFAAGECACVSVHGANRLG 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 420 SNSLIDLVVFGRAAALRAADVVtPGLKQDDL-PANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTGETL 498
Cdd:PRK05945 392 SNSLLECVVYGRRTGAAIAEYV-QGRKLPEVdEQRYLKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIM 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 499 EEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWMKHTLAS 578
Cdd:PRK05945 471 QEGLEKIQQLKQQYEQIYLDDKGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLAY 550
|
570 580 590
....*....|....*....|....*....|....
gi 519018380 579 IDDHArkVEIDYRPVhSYTMtnemayIEPKARVY 612
Cdd:PRK05945 551 YSPAG--IDIQYMPV-VITM------FEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
26-612 |
0e+00 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 560.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 26 TFDVVIVGAGGAGLRATVGCSQA--GLKTACISKVFPTRSHTVAAQGGVAASLAnmGPDNWKWHMYDTVKGSDWLGDQDS 103
Cdd:PRK09231 4 QADLAIIGAGGAGLRAAIAAAEAnpNLKIALISKVYPMRSHTVAAEGGSAAVAQ--DHDSFDYHFHDTVAGGDWLCEQDV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 104 IEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRY-NTEFFI 182
Cdd:PRK09231 82 VEYFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKI--------ERTWFAADKTGFHMLHTLFQTSLKYpQIQRFD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 183 EYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHP 262
Cdd:PRK09231 154 EHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 263 TGIYGAGCLITEGARGEGGYLTNAEGERFMERYA---------PSVK--DLAPRDMVSRAMTLEIREGRGV-GKQKDHIN 330
Cdd:PRK09231 234 TGLPGSGILMTEGCRGEGGILVNKDGYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVY 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 331 LHLDHLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvlTKqggdpdvvVPGLMAIGEAACV 410
Cdd:PRK09231 314 LDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCE--TR--------IKGLFAVGECSSV 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 411 SVHGANRLGSNSLIDLVVFGRAAALRAAD--VVTPGLKQDDLPANSADhALARLDRYRYAKGDAPTAELRLAMQKCMQNN 488
Cdd:PRK09231 384 GLHGANRLGSNSLAELVVFGRVAGEQAAEraATAGPGNEAALDAQAAD-VEQRLKALVNQEGGENWAKIRDEMGLSMEEG 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 489 CAVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHARED--FTER 566
Cdd:PRK09231 463 CGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTER 542
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 519018380 567 DDKTWMKHTLASIDDHArKVEIDYRPVhsyTMTNEmayiEPKARVY 612
Cdd:PRK09231 543 DDVNFLKHTLAFYNADG-TPRIEYSDV---KITKS----PPAKRVY 580
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
27-612 |
3.49e-169 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 493.64 E-value: 3.49e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASL-ANMGP-DNWKWHMYDTVKGSDWLGDQDSI 104
Cdd:PRK06452 6 YDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDPnDNPDYMTYDTVKGGDYLVDQDAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRYNTEFFIEY 184
Cdd:PRK06452 86 ELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTY--------PRTRFVGDKTGMALLHTLFERTSGLNVDFYNEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 185 FAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTG 264
Cdd:PRK06452 158 FSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 265 IYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVgkQKDHINLHLDHLDPAILHER 344
Cdd:PRK06452 238 LYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKER 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 345 LPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYhgevltkQGGDPDvvVPGLMAIGEAACVSVHGANRLGSNSLI 424
Cdd:PRK06452 316 LALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDI-------DGRNPD--IVGLFSAGEAACVSVHGANRLGSNSLL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 425 DLVVFGRAAalrAADVVTPGLKQDDLPANSADHALARL--DRYRYAKGDAPT--AELRLAMQKCMQNNCAVYRTGETLEE 500
Cdd:PRK06452 387 DTLVFGQVT---GRTVVQFLKSNPGNPTSNYEKEAEKVvdDAYKFVKSESGVhfGQILEKLRDTMWDYVGIYRDEGGLLN 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 501 GSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKTWMKHTLASID 580
Cdd:PRK06452 464 AMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIAYLR 543
|
570 580 590
....*....|....*....|....*....|..
gi 519018380 581 DHarKVEIDYRPVhsytmtnEMAYIEPKARVY 612
Cdd:PRK06452 544 GN--TVEVTFKPV-------KITRWKPEPRVY 566
|
|
| fum_red_Fp |
TIGR01176 |
fumarate reductase (quinol), flavoprotein subunit; The terms succinate dehydrogenase and ... |
26-612 |
2.15e-168 |
|
fumarate reductase (quinol), flavoprotein subunit; The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Pssm-ID: 273485 [Multi-domain] Cd Length: 580 Bit Score: 492.11 E-value: 2.15e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 26 TFDVVIVGAGGAGLRATVGCSQAG--LKTACISKVFPTRSHTVAAQGGVAASLANmgPDNWKWHMYDTVKGSDWLGDQDS 103
Cdd:TIGR01176 3 QHDIAVIGAGGAGLRAAIAAAEANphLDVALISKVYPMRSHTVAAEGGSAAVTGD--DDSLDEHFHDTVSGGDWLCEQDV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 104 IEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRY-NTEFFI 182
Cdd:TIGR01176 81 VEYFVAEAPKEMVQLEHWGCPWSRKPDGRVNVRRFGGMKK--------ERTWFAADKTGFHMLHTLFQTSLTYpQIMRYD 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 183 EYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHP 262
Cdd:TIGR01176 153 EWFVTDLLVDDGRVCGLVAIEMAEGRLVTILADAVVLATGGAGRVYPFNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHP 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 263 TGIYGAGCLITEGARGEGGYLTNAEGERFMERYA---------PSVK--DLAPRDMVSRAMTLEIREGRGVGKQK-DHIN 330
Cdd:TIGR01176 233 TGLPGTGILMTEGCRGEGGILVNKDGYRYLQDYGmgpetpvgePKNKymELGPRDKVSQAFWHEHNKGNTIDTPYgDVVY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 331 LHLDHLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAACV 410
Cdd:TIGR01176 313 LDLRHLGEDLLDERLPFICELAKAYVHVDPVKEPIPVRPTVHYTMGGIETDINCE----------TRIKGLFAVGECASV 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 411 SVHGANRLGSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALA-RLDRYRYAKGDAPTAELRLAMQKCMQNNC 489
Cdd:TIGR01176 383 GLHGANRLGSNSLAELVVFGRRAGEAAAERAARHQKSNESAIRAQARTVElRLERLLSQHGGENWADIRAEMGATMESGC 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 490 AVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDF--TERD 567
Cdd:TIGR01176 463 GIYRDGPLMQKTIDKLAELQERFKRAGIDDHSRVFNTDLLYLIELGGGLDVAEAMVHSALRRKESRGAHQRLDEgcTERD 542
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 519018380 568 DKTWMKHTLASIDDHArKVEIDYRPVhsytmtnEMAYIEPKARVY 612
Cdd:TIGR01176 543 DVHFLKHTLAFRESDG-TLRVGYSPV-------KITRWPPGERVY 579
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
25-582 |
1.48e-157 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 462.27 E-value: 1.48e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQAGlKTACISKVFPTRSHTVAAQGGVAASLANmgPDNWKWHMYDTVKGSDWLGDQDSI 104
Cdd:COG0029 3 LKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTDfgkgppaqRTCAAADRTGHAILHTLYGQAL-RYNTEFFIE 183
Cdd:COG0029 80 RVLVEEGPERIRELIELGVPFDRDEDGELALTREGGHSRR--------RILHAGDATGREIERALLEAVRaHPNITVLEN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 184 YFAIDLIME-EGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHP 262
Cdd:COG0029 152 HFAVDLITDaDGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 263 TGIYGAGC---LITEGARGEGGYLTNAEGERFMERYAPSvKDLAPRDMVSRAMTLEIREGRGvgkqkDHInlHLD--HLD 337
Cdd:COG0029 232 TALYHPGApsfLISEAVRGEGAVLRNADGERFMPDYHPR-AELAPRDVVARAIDAEMKKTGG-----DCV--YLDisHLD 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 338 PAILHERLPGISESAKIFaGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvlTKqggdpdvvVPGLMAIGEAACVSVHGANR 417
Cdd:COG0029 304 AEFIRERFPTIYARCLEL-GIDITKEPIPVAPAAHYTMGGVATDLDGR--TS--------IPGLYAVGEVACTGVHGANR 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 418 LGSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALarldryryAKGDAPTAELRLAMQKCMQNNCAVYRTGET 497
Cdd:COG0029 373 LASNSLLEGLVFGRRAAEDIAARLAESPLPPEIPEWDESVTD--------PDEEVLIAHLRDELRRLMWDYVGIVRTAKG 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 498 LEEGsklIHEVWAARDRVGVTDRSLIWNsdlvETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKtWMKHTLA 577
Cdd:COG0029 445 LERA---LRRLELLREEIEEYANFRVSR----DLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA-WRRHTVL 516
|
....*
gi 519018380 578 SIDDH 582
Cdd:COG0029 517 RLDDD 521
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
24-441 |
1.74e-157 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 458.91 E-value: 1.74e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 24 DHTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANM----GPDNWKWHMYDTVKGSDWLG 99
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVqkaaGEDSPEEHFYDTVKGGDGLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 100 DQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQrpFGGMTtdfgkgppAQRTCAAADRTGHAILHTLYGQALRYNTE 179
Cdd:COG1053 81 DQDLVEALAEEAPEAIDWLEAQGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 180 FFIEYFAIDLIMEEGRCRGVVCLKlDDGTIHRFRSQLVILATGGYGRAY------------FSATSAHTCTGDGNAMVLR 247
Cdd:COG1053 151 IFTETEVLDLIVDDGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 248 AGLPLQDMEFVQFHPTGIYGAGCLITEGARG-EGGYLTNAEGERFMERYapsvkdlAPRDMVSRAMTLEIREG------- 319
Cdd:COG1053 230 AGAALADMEFVQFHPTGLPGDGGLISEGARGkPGGILVNKEGERFMNEY-------APRDVVSRAILEEIDEPaylvldl 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 320 -----------RGVGKQKDHI-------NLHLDHLDPAIlhERLPGISEsakifAGVDVTKE-----------PIPVLPT 370
Cdd:COG1053 303 rhrrrleeyleAGYLVKADTIeelaaklGIDAAELAATV--ARYNAAAK-----AGVDPRGTclgpikegpfyAIPVRPG 375
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 519018380 371 VHYNMGGIPTNYHGEVLTKQGGdpdvVVPGLMAIGEaACVSVHGANRLGSNSLIDLVVFGRAAALRAADVV 441
Cdd:COG1053 376 VHYTMGGLRVDADARVLDADGT----PIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHAAEYA 441
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
28-598 |
2.49e-149 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 445.96 E-value: 2.49e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLAN--MGP-DNWKWHMYDTVKGSDWLGDQDSI 104
Cdd:PRK08626 7 DALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQEVA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSR-----------------TED----GRIYQRPFGGmTTDFgkgppaqRTCAAADRTGH 163
Cdd:PRK08626 87 RMFVHTAPKAVRELAAWGVPWTRvtagprtvvingekvtiTEKeeahGLINARDFGG-TKKW-------RTCYTADGTGH 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 164 AILHTLYGQALRYNTEFFIEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNA 243
Cdd:PRK08626 159 TMLYAVDNEAIKLGVPVHDRKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 244 MVLRAGL-PLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGV 322
Cdd:PRK08626 239 IALETGVaPLGNMEAVQFHPTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGV 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 323 -GKQKDHINLHLDHLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTkqggdpdvvVPGL 401
Cdd:PRK08626 319 kSPYGPHLWLDIRILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYG---------LKGL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 402 MAIGEAACVSVHGANRLGSNSLIDLVVFGRAAALRAADVvtpgLKQDDLPANSA------DHALARLDRYRYAKGDAPTA 475
Cdd:PRK08626 390 FSAGEAACWDMHGFNRLGGNSLAETVVAGMIVGKYVADF----CLGNELEIDTAlvekfvKKQQDRIDELIAGEGKENVF 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 476 ELRLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESR 555
Cdd:PRK08626 466 EIKNEMQEIMMEKVGIFRNGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESR 545
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 519018380 556 GAHAREDFTERDDKTWMKHTLAS-IDDHARKVEIDYRPVHSYTM 598
Cdd:PRK08626 546 GAHAREDYPKRNDRDWLNRTLASwPEGEALEPTLEYEPLDVMKM 589
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
28-423 |
1.31e-141 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 416.69 E-value: 1.31e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAA--SLANMGPDNWKWHMYDTVKGSDWLGDQDSIE 105
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDAlgNPPQGGIDSPELHPTDTLKGLDELADHPYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 106 YMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTtdfgkgpPAQRTCA-AADR-----TGHAILHTLYGQALRYNTE 179
Cdd:pfam00890 81 AFVEAAPEAVDWLEALGVPFSRTEDGHLDLRPLGGLS-------ATWRTPHdAADRrrglgTGHALLARLLEGLRKAGVD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 180 FFIEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQL-VILATGGYGR---------AYFSATSAHTCTGDGNAMVLRAG 249
Cdd:pfam00890 154 FQPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIAaVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 250 LPLQD--MEFVQFHPTGIYG----AGCLItEGARGEGGYLTNAEGERFMeryapsvKDLAPRDMVSRAMT-LEIREGRGv 322
Cdd:pfam00890 234 AALTDdlMEFVQFHPTSLVGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG- 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 323 gkqkDHINLHLDH-LDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQGgdpdVVVPGL 401
Cdd:pfam00890 305 ----ANVYLDASGsLDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLDADG----QPIPGL 376
|
410 420
....*....|....*....|..
gi 519018380 402 MAIGEAACVSVHGANRLGSNSL 423
Cdd:pfam00890 377 YAAGEVACGGVHGANRLGGNSL 398
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
28-578 |
6.83e-134 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 402.44 E-value: 6.83e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSqAGLKTACISKVFPTRSH-TVAAQGGVAASLANmgPDNWKWHMYDTVKGSDWLGDQDSIEY 106
Cdd:PRK06263 9 DVLIIGSGGAGARAAIEAE-RGKNVVIVSKGLFGKSGcTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 107 MVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRYNTEFFIEYFA 186
Cdd:PRK06263 86 LVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSF--------NRTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 IDLIMEEGR-CRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTGI 265
Cdd:PRK06263 158 IKLIVDENReVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 266 ----YGAGCLITEGARGEGGYLTNAEGERFMERYAPSVKDLAPRDMVSRAMTLEIREGRGVgkqkDHINLHLD--HLDPA 339
Cdd:PRK06263 238 vypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGT----NHGGVYLDvtHLPDE 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 340 ILHERLPGISESAKIFaGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAACvSVHGANRLG 419
Cdd:PRK06263 314 VIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGIRINEDCE----------TNIPGLFACGEVAG-GVHGANRLG 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 420 SNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALARLDRYRYaKGDAPTAELRLAMQKCMQNNCAVYRTGETLE 499
Cdd:PRK06263 382 GNALADTQVFGAIAGKSAAKNAENNEFKKVNRSVEEDIARIKSEIKFL-NGSINPYDLIDELKKTMWDYVSIVRNEKGLK 460
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 519018380 500 EGSKLIHEVWAARDRVGVTDRsliwnSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKtWMKHTLAS 578
Cdd:PRK06263 461 KALEEINELKEKLKDLKVNGI-----VDFNKALELENMILVAELVIKSALLRKESRGAHYREDYPETNDE-WFGNIILN 533
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
25-592 |
3.94e-131 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 398.25 E-value: 3.94e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGP-DNWKWHMYDTVKGSDWLGDQDS 103
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNPkDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 104 IEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTL---------YGQAL 174
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTY--------PRLAHVGDRTGLELIRTLqqkivslqqEDHAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 175 RYNTEFFIEYFA----IDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGL 250
Cdd:PRK07803 159 LGDYEARIKVFAectiTELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 251 PLQDMEFVQFHPTGIYGA----GCLITEGARGEGGYLTNAEGERFMERYAPSV-------------------------KD 301
Cdd:PRK07803 239 TLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPDVfkgqyaeteeeadrwykdndnnrrpPE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 302 LAPRDMVSRAMTLEIREGRGvgkqKDHINLHLD---HLDPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGI 378
Cdd:PRK07803 319 LLPRDEVARAINSEVKAGRG----SPHGGVYLDiasRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGV 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 379 ptnyhgEVltkqggDPDV---VVPGLMAIGEAACvSVHGANRLGSNSLIDLVVFGRAAALRAADVVT-----PGLKQDDL 450
Cdd:PRK07803 395 ------EV------DPDTgaaTVPGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRglgsrPAVSEEAV 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 451 PANSADhALARLDryRYAKGDAPTAeLRLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVtDRSLIWNSDLVE 530
Cdd:PRK07803 462 DAAARE-ALAPFE--RPAGAENPYT-LHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSV-EGHRQYNPGWHL 536
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 519018380 531 TLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERdDKTWMKHTLA-SIDDHARKVEIDYRP 592
Cdd:PRK07803 537 ALDLRNMLLVSECVARAALERTESRGGHTRDDHPGM-DPEWRRINLVcRADPVGGHVTVTRQP 598
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
29-612 |
6.65e-106 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 331.55 E-value: 6.65e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 29 VVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMGPDNWKW-HMYDTVKGSDWLGDQDSIEYM 107
Cdd:PRK08641 6 VIVVGGGLAGLMATIKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 108 VRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGmtTDFgkgppaQRTCAAADRTGHAILHTLYGQALRYNTEFFIEYFA- 186
Cdd:PRK08641 86 CEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGG--TLH------HRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEg 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 ---IDLIM-EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHP 262
Cdd:PRK08641 158 wefLGAVLdDEGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 263 TGIYGAGC--LITEGARGEGGYL-TNAEGER--FMERYAPSVKDLAPRDMVSRAM-TLEIREGRGVgKQKDHINLHLDHL 336
Cdd:PRK08641 238 TAIPGDDKlrLMSESARGEGGRVwTYKDGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGI-NGENMVYLDLSHK 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 337 DPAILHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYhgevltkqggDPDVVVPGLMAIGEAAcVSVHGAN 416
Cdd:PRK08641 317 DPKELDIKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDY----------DQMTNIPGLFAAGECD-YSYHGAN 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 417 RLGSNSLIDLVVFGRAAALRAADVVTpGLKQ--DDLPANSADHAL----ARLDRYRYAKGDAPTAELRLAMQKCMQNNCA 490
Cdd:PRK08641 386 RLGANSLLSAIYGGMVAGPNAVEYIK-GLGKsaDDVSSSVFEQALkqeqEKFDNILSMDGTENAYVLHKELGEWMTDNVT 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 491 VYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDKT 570
Cdd:PRK08641 465 VVRENDKLLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDEN 544
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 519018380 571 WMKHTLASIDDHARKVEIDYRPVhsytmtnEMAYIEPKARVY 612
Cdd:PRK08641 545 WLKTTMATYTPEGEEPEFSYEDV-------DTSLIPPRKRDY 579
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
27-576 |
6.10e-103 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 322.77 E-value: 6.10e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAGGAGLRATVgCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMgpDNWKWHMYDTVKGSDWLGDQDSIEY 106
Cdd:PRK07395 10 FDVLVVGSGAAGLYAAL-CLPSHLRVGLITKDTLKTSASDWAQGGIAAAIAPD--DSPKLHYEDTLKAGAGLCDPEAVRF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 107 MVRNAPAAVYELEHWGVPFSRTeDGRIyqrpfgGMTTDFGKGPPaqRTCAAADRTGHAILHTLYGQAL-RYNTEFFIEYF 185
Cdd:PRK07395 87 LVEQAPEAIASLVEMGVAFDRH-GQHL------ALTLEAAHSRP--RVLHAADTTGRAIVTTLTEQVLqRPNIEIISQAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 186 AIDLIM--EEGRCRGVVCLKldDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPT 263
Cdd:PRK07395 158 ALSLWLepETGRCQGISLLY--QGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 264 GIYGAGC---LITEGARGEGGYLTNAEGERFMERYAPSvKDLAPRDMVSRAMTLEIREgRGVGKQKDHINLHLDHLDPAI 340
Cdd:PRK07395 236 ALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHPA-GELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPAER 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 341 LHERLPGISESAKIFaGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAACVSVHGANRLGS 420
Cdd:PRK07395 314 IRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQ----------TSIPGLYAVGETASTGVHGANRLAS 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 421 NSLIDLVVFgrAAALRAADVVTPGLKQDDLPANSadhalARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTGETLEE 500
Cdd:PRK07395 383 NSLLECLVF--AAQLAQLELPIEPPASPDLPPIS-----FIIDASQWKNEQEQIQRIRQELPELVWQSAGICREADTLER 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 501 G-------------SKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTErD 567
Cdd:PRK07395 456 AiaqveqwqqqlaaLPLSQFLANLPPGQTVSFNGPDAEQQLRLWAETRNLLDIAYLILKSALFRTESRGGHYRLDYPQ-T 534
|
....*....
gi 519018380 568 DKTWMKHTL 576
Cdd:PRK07395 535 DPAWQVHTL 543
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
25-563 |
1.28e-99 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 312.12 E-value: 1.28e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQAGlKTACISKVFPTRSHTVAAQGGVAASLANmgPDNWKWHMYDTVKGSDWLGDQDSI 104
Cdd:TIGR00551 1 MEMDVVVIGSGAAGLSAALALAEKG-RVSVITKASVTDSNSYYAQGGIAAALAE--TDSIDAHVEDTLAAGAGICDEEAV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQAL-RYNTEFFIE 183
Cdd:TIGR00551 78 WFVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSY--------PRIFHAGDATGREIIPTLEKHARsEPNVNIIEG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 184 YFAIDLIMEEGRCRGVvcLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPT 263
Cdd:TIGR00551 150 EFALDLLIETGRCAGV--FVQGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPT 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 264 GIYGAGC---LITEGARGEGGYLTNAEGERFMERYAPsVKDLAPRDMVSRAMTLEIREGrgvgkQKDHINLHLDHLDPai 340
Cdd:TIGR00551 228 ALIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHP-RGELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN-- 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 341 LHERLPGISESAKiFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVltkqggdpdvVVPGLMAIGEAACVSVHGANRLGS 420
Cdd:TIGR00551 300 FKDRFPTIYAVCR-GAGIDPEREPIPVAPGAHYTMGGISVDAFGRT----------TIPGLYAIGETACTGLHGANRLAS 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 421 NSLIDLVVFGRAAAlraadvvtpglkqddlpANSADHALARLDRYRYAKGDAP---TAELRLAMQKCMQNNCAVYRTGET 497
Cdd:TIGR00551 369 NSLLECLVFGLRAA-----------------RTISREPPYASREYQSGVWDEPrseNPLDRHELQHKMSSLRSVLWNHAG 431
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 519018380 498 LEEGSKLIHEVWAardrvgvtdRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGAHAREDF 563
Cdd:TIGR00551 432 IVRLEWSLREALR---------KLVEIQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
27-568 |
8.46e-99 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 313.19 E-value: 8.46e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAGGAGLRATVGCSQAGlKTACISKVFPTRSHTVAAQGGVAASLANMgpDNWKWHMYDTVKGSDWLGDQDSIEY 106
Cdd:PLN02815 30 FDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNTNYAQGGVSAVLDPS--DSVESHMRDTIVAGAFLCDEETVRV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 107 MVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRY-NTEFFIEYF 185
Cdd:PLN02815 107 VCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHSH--------HRIVHAADMTGREIERALLEAVKNDpNITFFEHHF 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 186 AIDLIM----EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFH 261
Cdd:PLN02815 179 AIDLLTsqdgGSIVCHGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFH 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 262 PTGIYGAGC------------LITEGARGEGGYLTNAEGERFMERYaPSVKDLAPRDMVSRAMTLEIREGRgvgkqKDHI 329
Cdd:PLN02815 259 PTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLY-DERAELAPRDVVARSIDDQLKKRN-----EKYV 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 330 NLHLDHLDPAILHERLPGI-SESAKIfaGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAA 408
Cdd:PLN02815 333 LLDISHKPREEILSHFPNIaAECLKR--GLDITKQPIPVVPAAHYMCGGVRTGLQGE----------TNVQGLYAAGEVA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 409 CVSVHGANRLGSNSLIDLVVFGRaaalRAADVVTPGLKQDDLPANSADHALARLDRYRYAKGDAP-----TAELRLAMQK 483
Cdd:PLN02815 401 CTGLHGANRLASNSLLEALVFAR----RAVQPSIDHMARALRDVSAAAAWARPVAPTALADSVMDeilewTAVVRKELQR 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 484 CMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVTDRsliWNSDLV--ETLEFDNLIVQAVVTMDGALNRTESRGAHARE 561
Cdd:PLN02815 477 IMWNYVGIVRSTERLETAERKLEELEAEWEAILFRHG---WKPTMVglEACEMRNLFCVAKLVVSSALARKESRGLHYTT 553
|
....*..
gi 519018380 562 DFTERDD 568
Cdd:PLN02815 554 DYPELVE 560
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
28-566 |
1.11e-97 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 307.69 E-value: 1.11e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTAcISKVFPTRSHTVAAQGGVAASLANMgpDNWKWHMYDTVKGSDWLGDQDSIEYM 107
Cdd:PRK08071 5 DVIIIGSGIAALTVAKELCHEYNVII-ITKKTKRNSNSHLAQGGIAAAVATY--DSPNDHFEDTLVAGCHHNNERAVRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 108 VRNAPAAVYELEHWGVPFSRTEDGRIYqrpfggmttdFGK-GPPAQRTC--AAADRTGHAILHTLYGQALRYNTefFIEY 184
Cdd:PRK08071 82 VEEGPKEIQELIENGMPFDGDETGPLH----------LGKeGAHRKRRIlhAGGDATGKNLLEHLLQELVPHVT--VVEQ 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 185 -FAIDLIMEEGRCRGVVClKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPT 263
Cdd:PRK08071 150 eMVIDLIIENGRCIGVLT-KDSEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPT 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 264 GIYGAG-C--LITEGARGEGGYLTNAEGERFMERYAPSvKDLAPRDMVSRAMTLEIREGRGVgkqkdHINLHldhldpAI 340
Cdd:PRK08071 229 MLYANGrCvgLVSEAVRGEGAVLINEDGRRFMMGIHPL-ADLAPRDVVARAIHEELLSGEKV-----YLNIS------SI 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 341 LH--ERLPGISESAKIfAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAACVSVHGANRL 418
Cdd:PRK08071 297 QNfeERFPTISALCEK-NGVDIETKRIPVVPGAHFLMGGVKTNLDGE----------TSIPGLYAIGEVACTGVHGANRL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 419 GSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALARLdryryakgdaPTAELrlaMQKCMQNNCAVYRTGETL 498
Cdd:PRK08071 366 ASNSLLEGLVFGKRAAEHILTKATKPRLNPFAEKEKKFIVLNHL----------PTKEE---IQEKMMKYVGIVRTEQSL 432
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 519018380 499 EEGSKLIHEVwAARDRVGVTDRSLIwnsdlvETLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTER 566
Cdd:PRK08071 433 SEAKRWLEKY-GVRNMILDHDALTN------EEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR 493
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
24-569 |
4.59e-93 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 296.44 E-value: 4.59e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 24 DHTFDVVIVGAGGAGLraTVGCSQAG-LKTACISKVFPTRSHTVAAQGGVAASLANmgPDNWKWHMYDTVKGSDWLGDQD 102
Cdd:PRK09077 6 EHQCDVLIIGSGAAGL--SLALRLAEhRRVAVLSKGPLSEGSTFYAQGGIAAVLDE--TDSIESHVEDTLIAGAGLCDED 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 103 SIEYMVRNAPAAVYELEHWGVPFSRTEDgriYQRPFGGMTTDFGkGPPAQRTCAAADRTGHAILHTLYGQALRY-NTEFF 181
Cdd:PRK09077 82 AVRFIAENAREAVQWLIDQGVPFTTDEQ---ANGEEGYHLTREG-GHSHRRILHAADATGKAVQTTLVERARNHpNITVL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 182 IEYFAIDLIMEE------GRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDM 255
Cdd:PRK09077 158 ERHNAIDLITSDklglpgRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 256 EFVQFHPTGIYGAGC---LITEGARGEGGYLTNAEGERFMERYAPSvKDLAPRDMVSRAMTLEIREgRGVgkqkDHINLH 332
Cdd:PRK09077 238 EFNQFHPTCLYHPQArsfLITEALRGEGAYLKLPDGTRFMPDFDER-AELAPRDIVARAIDHEMKR-LGA----DCVYLD 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 333 LDHLDPAILHERLPGISESAKIFaGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVltkqggDpdvvVPGLMAIGEAACVSV 412
Cdd:PRK09077 312 ISHKPADFIRQHFPTIYERCLEL-GIDITKEPIPVVPAAHYTCGGVMVDLHGRT------D----LDGLYAIGEVSYTGL 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 413 HGANRLGSNSLIDLVVFGRAAalrAADVvtpgLKQddLPANSADHALARLDRYRYAKGDAPT------AELRLAmqkcMQ 486
Cdd:PRK09077 381 HGANRMASNSLLECLVYGRSA---AEDI----LSR--LPKAPMPPTLPAWDESRVTDSDEEVviqhnwHELRLF----MW 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 487 NNCAVYRTGETLEEG-------SKLIHEVWaARDRVgvtdrsliwNSDLvetLEFDNLIVQAVVTMDGALNRTESRGAHA 559
Cdd:PRK09077 448 DYVGIVRTTKRLERAlhrirllQQEIDEYY-ANFRV---------SNNL---LELRNLVQVAELIVRCAMERKESRGLHY 514
|
570
....*....|
gi 519018380 560 REDFTERDDK 569
Cdd:PRK09077 515 TLDYPELLPE 524
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
29-612 |
1.55e-92 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 297.15 E-value: 1.55e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 29 VVIVGAGGAGLRATVGCSQAGLKTACISKV-FPTRSHTVAAQGGVAASLANMGPDNWKW-HMYDTVKGSDWLGDQDSIEY 106
Cdd:TIGR01811 1 VIVVGTGLAGGMAAAKLAELGYHVKLFSYVdAPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 107 MVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTdfgkgppaQRTCAAADRTGHAILHTLYGQALRYNTEFFIEYFA 186
Cdd:TIGR01811 81 LAVASPEIIDLMDAMGVPFAREYGGLLDTRSFGGVQV--------SRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 ----IDLIM-EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFH 261
Cdd:TIGR01811 153 gwemLDIIVvDGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIH 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 262 PTGIYGAGC------LITEGARGEG------------GYLTNAEGER--FMERYAPSVKDLAPRDMVSRAMTLEIREGRG 321
Cdd:TIGR01811 233 PTAIPVDGTwqsklrLMSESLRNDGriwtpkekndnrDPNTIPEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 322 VGKQKDHINLHLDHLDPAI----LHERLPGISESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYhgevltkqggDPDVV 397
Cdd:TIGR01811 313 VGPGENAVYLDFSDADERLgrkeIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDY----------DQMTN 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 398 VPGLMAIGEAAcVSVHGANRLGSNSLIDLVVFGRAAALRA-ADVVTPGLKQDDLP--ANSADHALA----RLDRYRYAKG 470
Cdd:TIGR01811 383 IPGLFAAGECD-FSQHGANRLGANSLLSAIADGYFALPFTiPNYLGPELSSEDMPedAPEFQAALAeeqeRFDRLLKMRG 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 471 DAPTAELRLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAA-RDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGAL 549
Cdd:TIGR01811 462 DENPYYLHRELGEIMTENCGVSRNNEKLLKTDEKIRELRERfWKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDAL 541
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 519018380 550 NRTESRGAHAREDF------TERDDKTWMKHTLASIDDHARKVEIDYRPVhsytmtnEMAYIEPKARVY 612
Cdd:TIGR01811 542 NRNESCGAHFRPEFptpdgeAERNDEEFLKVTAWEFQGENDAPEFHYEEL-------DFELVPPRKRDY 603
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
25-586 |
1.40e-88 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 284.94 E-value: 1.40e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASLANMgpDNWKWHMYDTVKGSDWLGDQDSI 104
Cdd:PRK07804 15 DAADVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDPG--DSPEAHVADTLVAGAGLCDPDAV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPFGGMTTDfgkgppaqRTC-AAADRTGHAILHTLYGQALRYNTEFFIE 183
Cdd:PRK07804 93 RSLVAEGPRAVRELVALGARFDESPDGRWALTREGGHSRR--------RIVhAGGDATGAEVQRALDAAVRADPLDIREH 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 184 YFAIDLIM-EEGRCRGVVCLKLDDGTIHRF---RSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQ 259
Cdd:PRK07804 165 ALALDLLTdGTGAVAGVTLHVLGEGSPDGVgavHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQ 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 260 FHPTGIY-GAGC-----LITEGARGEGGYLTNAEGERFMERYAPsVKDLAPRDMVSRAMTLEIREgRGVgkqkDHinLHL 333
Cdd:PRK07804 245 FHPTVLFlGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHP-LADLAPRDVVAKAIDRRMKA-TGD----DH--VYL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 334 DHLDPAILHERLPGISESAKIfAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEvltkqggdpdVVVPGLMAIGEAACVSVH 413
Cdd:PRK07804 317 DARGIEGFARRFPTITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVTDVYGR----------TSVPGLYAAGEVACTGVH 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 414 GANRLGSNSLIDLVVFGRAAAlraadvvtpglkqDDLPANSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYR 493
Cdd:PRK07804 386 GANRLASNSLLEGLVVGERAG-------------AAAAAHAAAAGRPRATPAVGPEPGLLPALDRAELQRAMTRGAGVLR 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 494 TGETLEEGSKLIHEVWAARDRVGVTDrsliwnsdlvetLEFDNLIVQAVVTMDGALNRTESRGAHAREDFTERDDkTWMK 573
Cdd:PRK07804 453 SAAGLARAADRLAAGAPARVVPGRAD------------WEDTNLTLVARALVAAALARTESRGCHWREDFPDTDD-EWAR 519
|
570
....*....|...
gi 519018380 574 HTLASIDDHARKV 586
Cdd:PRK07804 520 SIVVRLADDGNLV 532
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
28-567 |
1.61e-87 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 281.41 E-value: 1.61e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGL--------RATVGCSQAGLKTACISkvfptrshtVAAQGGVAASlanMGP-DNWKWHMYDTVKGSDWL 98
Cdd:PRK07512 11 RPVIVGGGLAGLmaalklapRPVVVLSPAPLGEGASS---------AWAQGGIAAA---LGPdDSPALHAADTLAAGAGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 99 GDQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRiyqrpfggmttdFGKGPPAQRTC-----AAADRTGHAILHTLYGQA 173
Cdd:PRK07512 79 CDPAVAALITAEAPAAIEDLLRLGVPFDRDADGR------------LALGLEAAHSRrrivhVGGDGAGAAIMRALIAAV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 174 LRYNTEFFIE-YFAIDLIMEEGRCRGVVCLKldDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPL 252
Cdd:PRK07512 147 RATPSITVLEgAEARRLLVDDGAVAGVLAAT--AGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVI 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 253 QDMEFVQFHPTGIYGAG---CLITEGARGEGGYLTNAEGERFMERYAPSvKDLAPRDMVSRAMTLEIREGRGVgkqkdhi 329
Cdd:PRK07512 225 ADPEFVQFHPTAIDIGRdpaPLATEALRGEGAILINEDGERFMADIHPG-AELAPRDVVARAVFAEIAAGRGA------- 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 330 nlHLDHLDP--AILHERLPGISESAkIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVltkqggdpdvVVPGLMAIGEA 407
Cdd:PRK07512 297 --FLDARAAlgAHFATRFPTVYAAC-RSAGIDPARQPIPVAPAAHYHMGGIAVDADGRS----------SLPGLWAAGEV 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 408 ACVSVHGANRLGSNSLIDLVVFGRAAALRAADVVTPGlkqddlpansadhALARLDRYRYAKGDAPTAELRLAMQKCmqn 487
Cdd:PRK07512 364 ASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAA-------------AAPLSAAAAPALDPADLALLRPIMSRH--- 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 488 nCAVYRTGETLEEGSKLIHEVWAARDRVgvtdrsliwnsdlvetlefDNLIVQAVVTMDGALNRTESRGAHAREDFTERD 567
Cdd:PRK07512 428 -VGVLRDADGLRRAIAALLPLEAGAGPA-------------------ADPATVALLIAVAALAREESRGAHFRTDFPLTA 487
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
28-435 |
7.38e-74 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 243.05 E-value: 7.38e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQaGLKTACISKVFPTRSHTVAAQGGVAASLanmGPDNWKWHMYDTVKGSDWLGDQDSIEYM 107
Cdd:PRK06175 6 DVLIVGSGVAGLYSALNLRK-DLKILMVSKGKLNECNTYLAQGGISVAR---NKDDITSFVEDTLKAGQYENNLEAVKIL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 108 VRNAPAAVYELEHWGVPFSRTEDGRIYQRPfGGMTTDfgkgppaqRTCAAADRTGHAILHTLYGQAL-RYNTEFFIEYFA 186
Cdd:PRK06175 82 ANESIENINKLIDMGLNFDKDEKELSYTKE-GAHSVN--------RIVHFKDNTGKKVEKILLKKVKkRKNITIIENCYL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 IDLIMEEGRCRGVVCLKldDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTGDGNAMVLRAGLPLQDMEFVQFHPTGIY 266
Cdd:PRK06175 153 VDIIENDNTCIGAICLK--DNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 267 GAGC-----LITEGARGEGGYLTNAEGERFmeryapsVKDLAPRDMVSRAMTLEIREgrgvgKQKDHINLHLDHLDPAIL 341
Cdd:PRK06175 231 EETIegkkfLISESVRGEGGKLLNSKGERF-------VDELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 342 HERLPGISESAKIfAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKQggdpdvvvpgLMAIGEAACVSVHGANRLGSN 421
Cdd:PRK06175 299 KNRFPTIYEECLK-RGIDITKDAIPVSPAQHYFMGGIKVDLNSKTSMKN----------LYAFGEVSCTGVHGANRLASN 367
|
410
....*....|....
gi 519018380 422 SLIDLVVFGRAAAL 435
Cdd:PRK06175 368 SLLEGLVFSKRGAE 381
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
478-612 |
3.96e-65 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 209.22 E-value: 3.96e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 478 RLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVTDRSLIWNSDLVETLEFDNLIVQAVVTMDGALNRTESRGA 557
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 519018380 558 HAREDFTERDDKTWMKHTLASIDDHARKVEIDYRPVHSYTMtnemayIEPKARVY 612
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDGGPRLEYEPVTFTTL------FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
29-563 |
1.38e-56 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 198.10 E-value: 1.38e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 29 VVIVGAGGAGLRATVGCSQAGLKTACISKVfPTRSHTVAAQGGVAASLanMGPDNWKWHMYDTVKGSDWLGDQDSIEYMV 108
Cdd:PRK08401 4 VGIVGGGLAGLTAAISLAKKGFDVTIIGPG-IKKSNSYLAQAGIAFPI--LEGDSIRAHVLDTIRAGKYINDEEVVWNVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 109 RNAPAAVYELEHWGVPF--SRTEDGRIYQRPFggmttdfgkgppaqrtcAAADRTGHAILHTLYGQALRYNTEFfIEYFA 186
Cdd:PRK08401 81 SKSSEAYDFLTSLGLEFegNELEGGHSFPRVF-----------------TIKNETGKHIIKILYKHARELGVNF-IRGFA 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 187 IDLIMEEGRCRGVVClkldDGTIHRFRSqlVILATGGYGRAY-FSATSAH---TCTGDgnaMVLRaGLPLQDMEFVQFHP 262
Cdd:PRK08401 143 EELAIKNGKAYGVFL----DGELLKFDA--TVIATGGFSGLFkFTAGSPLnlgTLIGD---AVMK-GAPARDLEFVQFHP 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 263 TGIYGAGC--LITEGARGEGGYLTNAEGERFmeryapsVKDLAPRDMVSRAMTLEIREGRGVgkqkdhinlHLDHLDPAI 340
Cdd:PRK08401 213 TGFIGKRGtyLISEAVRGAGAKLVTGDGERF-------VNELETRDIVARAIYRKMQEGKGV---------FLDATGIED 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 341 LHERLPGISeSAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVLTKqggdpdvvvpGLMAIGEAACVSVHGANRLGS 420
Cdd:PRK08401 277 FKRRFPQIY-AFLRKEGIDPSRDLIPVTPIAHYTIGGISVDTFYRTGIK----------NLYAIGEAASNGFHGANRLAS 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 421 NSLIDLVVFGRAAAlRAADVVTPGLKQDDLPANSADHAlarldryryakGDAPtaelrlAMQKCMQNNCAVYRTGETLEE 500
Cdd:PRK08401 346 NSLLECIVSGLEVA-RTISRERPKLREVKEPPYHGYEL-----------GDVD------SIREILWNHAGIVRSEESLRE 407
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 519018380 501 GSKLIHEVWAardrvgvtDRSLiwnsdlvetlefdNLIVQAVVTMdgALNRTESRGAHAREDF 563
Cdd:PRK08401 408 GLKKLEGIEA--------DPRL-------------KLLAKGVLEC--ALAREESRGAHYREDF 447
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
27-572 |
3.81e-55 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 197.73 E-value: 3.81e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAG--GAGLRATVGcsQAGLKTacisKVF-----PTRSHTVAAQGGVAAS--LANMGpDNWKWHMYDTVKGSDW 97
Cdd:PRK07573 36 FDVIVVGTGlaGASAAATLG--ELGYNV----KVFcyqdsPRRAHSIAAQGGINAAknYQNDG-DSVYRLFYDTVKGGDF 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 98 lgdqdsieymvRNAPAAVYELEH-----------WGVPFSRTEDGRIYQRPFGGmttdfgkgppAQ--RTCAAADRTGHA 164
Cdd:PRK07573 109 -----------RAREANVYRLAEvsvniidqcvaQGVPFAREYGGLLANRSFGG----------AQvsRTFYARGQTGQQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 165 ILHTLYgQAL-----RYNTEFFIEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGRAYFSATSAHTCTG 239
Cdd:PRK07573 168 LLLGAY-QALsrqiaAGTVKMYTRTEMLDLVVVDGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 240 DGNAMVLRAGLPLQDMEFVQFHPTGIYGAG------CLITEGARGEGGYLTN------------AEGER--FMERYAPSV 299
Cdd:PRK07573 247 TAIWRAHKKGAYFANPCFTQIHPTCIPVSGdyqsklTLMSESLRNDGRIWVPkkkgdkrkpndiPEEERdyYLERRYPAF 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 300 KDLAPRDMVSRAMTLEIREGRGVGKQKDHInlHLDHLDpAIlhERL--PGISES--------AKIfAGVDVTKEPIPVLP 369
Cdd:PRK07573 327 GNLVPRDVASRAAKERCDAGRGVGPTGLGV--YLDFAD-AI--KRLgkDVIRERygnlfdmyERI-TGENPYETPMRIYP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 370 TVHYNMGGIPTNYhgEVLTKqggdpdvvVPGLMAIGEAACvSVHGANRLGSNSLIDLVVFGR-------AAALraADVVT 442
Cdd:PRK07573 401 AVHYTMGGLWVDY--NLMST--------IPGLFVIGEANF-SDHGANRLGASALMQGLADGYfvlpytiGNYL--ADTIG 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 443 PGLKQDDLPA--NSADHALARLDRYRYAKGDAPTAELRLAMQKCMQNNCAVYRTGETLEEGSKLIHEV----WAardRVG 516
Cdd:PRK07573 468 TPKVSTDHPEfkEAEAEVQDRIDRLLNIKGKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALreefWK---NVR 544
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 519018380 517 VTDRSLIWNSDL------VETLEFDNLIVqavvtMDgALNRTESRGAHAREDF-TE-----RDDKTWM 572
Cdd:PRK07573 545 VPGSADELNQELekagrvADFLELGELMC-----RD-ALHREESCGGHFREEHqTEdgealRDDENFA 606
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
28-434 |
2.42e-46 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 169.44 E-value: 2.42e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRS-HTVAAQGGVAASL----ANMG-PDNWKWHMYDTVKGSDWLGDQ 101
Cdd:TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAANVVLLEKMPVIGgNSAIAAGGMNAAGtdqqKALGiEDSPELFIKDTLKGGRGINDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 102 DSIEYMVRNAPAAvYELEHWGVPFSRTEDGRiyqrpFGGMTTdfgkgPPAQRTcAAADRTGHAILHTLYGQALRYNTEFF 181
Cdd:TIGR01813 81 ELVRILAEESKDA-VDWLQDGVGARLDDLIQ-----LGGHSV-----PRAHRP-TGGAASGAEIVQTLYKKAKKEGIDTR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 182 IEYFAIDLIM-EEGRCRGVVcLKLDDGTIHRFRSQLVILATGGYGR------AY------FSATSAHTCTGDGNAMVLRA 248
Cdd:TIGR01813 149 LNSKVEDLIQdDQGSVVGVV-VKGKGKGIYIKAAKAVVLATGGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 249 GLPLQDMEFVQFHPTG-IYGAGCLITEGARGEGGYLTNAEGERFMEryapsvkDLAPRDMVS------------------ 309
Cdd:TIGR01813 228 GAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFMN-------ELATRDKVSdailaqpgkdaylifddd 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 310 ---RAMTLEIREGRGVGKQKD-------HINLHLDHLDPAIlhERLPGISESAK-------IFAGVDVTKEP---IPVLP 369
Cdd:TIGR01813 301 vykKAKMVDNYYRLGVAYKGDsleelakQFGIPAAALKQTI--KDYNGYVASGKdtpfgrpMDMPTDLSKAPyyaIKVTP 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 519018380 370 TVHYNMGGIPTNYHGEVLTKQGgdpdVVVPGLMAIGEAACvSVHGANRLGSNSLIDLVVFGRAAA 434
Cdd:TIGR01813 379 GVHHTMGGVKINTKAEVLDANG----KPIPGLFAAGEVTG-GVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
26-441 |
6.45e-42 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 158.46 E-value: 6.45e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 26 TFDVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVAAQGGVAASL----ANMGPDNWKWHMYD-TVKGSDWLGD 100
Cdd:PRK06481 61 KYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASEtkfqKAQGIADSNDKFYEeTLKGGGGTND 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 101 QDSIEYMVRNAPAAVYELEHWGVPFSRTEDGriyqrpfGGMTTdfgkgppaQRTCAAADRT--GHAILHTLYGQALRYNT 178
Cdd:PRK06481 141 KALLRYFVDNSASAIDWLDSMGIKLDNLTIT-------GGMSE--------KRTHRPHDGSavGGYLVDGLLKNVQERKI 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 179 EFFIEYFAIDLIMEEGRCRGVVcLKLDDGTIHRFRSQLVILATGGYGR------------AYFSATSAHTCTGDGNAMVL 246
Cdd:PRK06481 206 PLFVNADVTKITEKDGKVTGVK-VKINGKETKTISSKAVVVTTGGFGAnkdmiakyrpdlKGYVTTNQEGSTGDGIKMIE 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 247 RAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNAEGERFM-----------------ERYAPSVKDLAPRDmvs 309
Cdd:PRK06481 285 KLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKD--- 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 310 RAMTLEIREGRGVGKQKDHINLHLDHLD-PA-ILHERLPGISESAKI--------FAGVD--VTKEP---IPVLPTVHYN 374
Cdd:PRK06481 362 RVKAIAQYEEKGFVEEGKTIDELAKKINvPAeTLTKTLDTWNKAVKNkkdeafgrTTGMDndLSTGPyyaIKIAPGIHYT 441
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 519018380 375 MGGIPTNYHGEVLTKQGGDpdvvVPGLMAIGEAACvSVHGANRLGSNSLIDLVVFGRAAALRAADVV 441
Cdd:PRK06481 442 MGGVKINTNTEVLKKDGSP----ITGLYAAGEVTG-GLHGENRIGGNSVADIIIFGRQAGTQSAEFA 503
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
25-596 |
4.79e-23 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 103.21 E-value: 4.79e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQA--GLKTACISKVFPTRSHTVAaqggvaaslanMGPD---NWKWHMYDTVK------ 93
Cdd:PRK08275 8 VETDILVIGGGTAGPMAAIKAKERnpALRVLLLEKANVKRSGAIS-----------MGMDglnNAVIPGHATPEqytkei 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 94 --GSDWLGDQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRIYQR---PFGgmttdfgkgppaqrTCAAADRTGHAILHT 168
Cdd:PRK08275 77 tiANDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGDYAVKkvhHMG--------------SYVLPMPEGHDIKKV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 169 LYGQALRYNTEFFIEYFAIDLIM-EEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGR-----------AYFSATSAht 236
Cdd:PRK08275 143 LYRQLKRARVLITNRIMATRLLTdADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA-- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 237 ctGDGNAMVLRAGLPLQDMEFVQFHP--TGIYGAGCLITEGARGegGYLTNAEGERFMERYAPSvkdlaprDMVSRAMTL 314
Cdd:PRK08275 221 --GDGYAMAYHAGAELANLECFQINPliKDYNGPACAYVTGPLG--GYTANAKGERFIECDYWS-------GQMMWEFYQ 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 315 EIREGRGvgkqkdHINLHLDHLDP-------AILH--ERlpgisESAKIF---AGVDVTKEPIP-VLPTVHYNMG----G 377
Cdd:PRK08275 290 ELQSGNG------PVFLKLDHLAEetiqtieTILHtnER-----PSRGRFhegRGTDYRQQMVEmHISEIGFCSGhsasG 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 378 IPTNYHGEvltkqggdpdVVVPGLMAIGEAACVsvhganrlGSNSLIDLVVFGRAAALRAADVVtpglkqDDLPANSADH 457
Cdd:PRK08275 359 VWVNEKAE----------TTVPGLYAAGDMASV--------PHNYMLGAFTYGWFAGENAAEYV------AGRDLPEVDA 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 458 ALARLDRYRYAkgdAPT--------AELRLAMQKCMQNNCAVYRTGETLEEGSKLIHEVWAARDRVGVTDrsliWNsDLV 529
Cdd:PRK08275 415 AQVEAERARVL---APLhredglppAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH-ELM 486
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 519018380 530 ETLEFDNLIVQAVVTMDGALNRTESRGA--HAREDFTERDDKTWMKHTLASIDDHARKVEIDyRPVHSY 596
Cdd:PRK08275 487 RALEVSSIRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHTHLRKDEDGRMVSFK-RPVEPY 554
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
193-441 |
1.11e-19 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 93.69 E-value: 1.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 193 EGRCRGVVCLKLDD--GTIHRFRSQLVILATGGYG---------RAY------FSATSAHTCTGDGNAMVLRAGLPLQDM 255
Cdd:PTZ00306 586 EIRVTGVRYKQASDasGQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDM 665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 256 EFVQFHPTGIYG-------AGCLITEGARGEGGYLTNAEGERFmeryapsVKDLAPRDMVSRAMTLEIREGRGVGKQKDH 328
Cdd:PTZ00306 666 DKVQLHPTGLIDpkdpsnrTKYLGPEALRGSGGVLLNKNGERF-------VNELDLRSVVSQAIIAQGNEYPGSGGSKFA 738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 329 -------------INLHLDHLDPAILHERLPGISESAKIFaGVDV---------------TKEPIP-------------- 366
Cdd:PTZ00306 739 ycvlneaaaklfgKNSLGFYWKRLGLFQRVDDVKGLAKLI-GCPVenlhrtletyerlstKKVACPltgkvvfpcvvgtq 817
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 367 -------VLPTVHYNMGGIPTNYHGEVLTKQGGDP--DVVVP--GLMAIGEAACvSVHGANRLGSNSLIDLVVFGRAAAL 435
Cdd:PTZ00306 818 gpyyvafVTPSIHYTMGGCLISPSAEMQMEDNSVNifEDRRPilGLFGAGEVTG-GVHGGNRLGGNSLLECVVFGKIAGD 896
|
....*.
gi 519018380 436 RAADVV 441
Cdd:PTZ00306 897 RAATIL 902
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
21-594 |
2.90e-18 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 88.44 E-value: 2.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 21 PIIDHTFDVVIVGAGGAGLRATVGCSQ--AGLKTACISKVFPTRSHTVAAqgGVAASLANMGPdNWKWHMY-DTVKGsDW 97
Cdd:PRK06854 6 EVVEVDTDILIIGGGMAGCGAAFEAKEwaPDLKVLIVEKANIKRSGAVAQ--GLSAINAYIGE-GETPEDYvRYVRK-DL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 98 LG--DQDSIEYMVRNAPAAVYELEHWGVPFSRTEDGRiYQRPfggmttdfGK------GPPAQRTCAAADRTGHAIlhtl 169
Cdd:PRK06854 82 MGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVRR--------GRwqiminGESYKPIVAEAAKKALGD---- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 170 ygqalryntEFFIEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGG----Y---------GRAYFSATSaht 236
Cdd:PRK06854 149 ---------NVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiYrprspgegrGRMWYPPFN--- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 237 cTGDGNAMVLRAG--LPLQDMEFVQFH------PTGIYgagclitegARGEGGYLTNAEGERFMERYAPSVKDLAPRDMV 308
Cdd:PRK06854 217 -TGSGYAMGIRAGaeMTTFENRFIPLRfkdgygPVGAW---------FLLFKAKAVNALGEEYEAKNAAELKKYVPYADY 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 309 SR--------AMTLEIREGRGVGKQKDHINLHLDHLDPAILHERL---PGIsesAKIFAGVDV--TKEPIPVLPTVHYNM 375
Cdd:PRK06854 287 KPiptclrnyATVEENKAGRGPIYMDTEEALQDKHLESELWEDFLdmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIV 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 376 G------GIPTNYHGEVLTKQGGDP---DVVVPGLMAIGEAACVSVHganRLGSNSLIDlvvfGRAAALRAADVV----- 441
Cdd:PRK06854 364 GshsgasGYWVSGPEDWVPEEYKWGynrMTTVEGLFAAGDVVGGSPH---KFSSGSFAE----GRIAAKAAVRYIldnkd 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 442 -TPGLKqDDLPANSADHALARLDRYRYAKGDA----------PTAELRLAMQKCMQNNCA----VYRTGET-LEEGSKLI 505
Cdd:PRK06854 437 eKPEID-DDQIEELKKEIYAPLERYEEFKDYStdpdvnpnyiSPEQLEERLQKIMDEYAGgistNYTTNEKlLEIALELL 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 506 HEV------WAARDrvgvtdrsliwNSDLVETLEFDNLIVQAVVTMDGALNRTESR--GAHAREDFTERDDKTWMKHTLA 577
Cdd:PRK06854 516 EMLeedsekLAARD-----------LHELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDENWKCFVNS 584
|
650
....*....|....*..
gi 519018380 578 SIDDHARKVEIDYRPVH 594
Cdd:PRK06854 585 RYDPGTGEWTIRKLPYY 601
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
28-596 |
5.51e-12 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 69.11 E-value: 5.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISKVFPTRSHTVA-AQGGV--AASLANMGPDNWkwhMYDTVKGSDWLGDQDSI 104
Cdd:PRK13800 15 DVLVIGGGTAGTMAALTAAEHGANVLLLEKAHVRHSGALAmGMDGVnnAVIPGKAEPEDY---VAEITRANDGIVNQRTV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 105 EYMVRNAPAAVYELEHWGVPFSRTEDGRIYQRPF---GGMTTDFGKGPPAQRtcaaadrtghAILHTLYGQALRYNTEFF 181
Cdd:PRK13800 92 YQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVhrsGSYVLPMPEGKDVKK----------ALYRVLRQRSMRERIRIE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 182 IEYFAIDLIMEEGRCRGVVCLKLDDGTIHRFRSQLVILATGGYGR------AYFSATSAH-TCTGDGNAMVLRAGLPLQD 254
Cdd:PRK13800 162 NRLMPVRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRlglpasGYLYGTYENpTNAGDGYSMAYHAGAELSG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 255 MEFVQFHP--TGIYGAGCLITegARGEGGYLTNAEGERFMEryapsvkdlapRDMVSRAMTLEIRegRGVGKQKDHINLH 332
Cdd:PRK13800 242 IECFQINPliKDYNGPACAYV--ANPFGGYQVNAQGERFVD-----------SDYWSGQMMAEVK--REIESARGPIYLK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 333 LDHLDpailherlpgiSESAKIFAGVDVTKEPiPVLPTVHYNMGGIPTNYHGEVLTKQGG--------------DPDVVV 398
Cdd:PRK13800 307 VSHLP-----------EETLSALESILHTTER-PTRGTFHANRGHDYRTHDIEMHISEIGlcsghsasgvwvdeHARTTV 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 399 PGLMAIGEAACVSvhganrlgSNSLIDLVVFGRAAALRAADVVTPGLKQDDLPANSADHALARLDRYRYAKGDAPTAELR 478
Cdd:PRK13800 375 PGLYAAGDLACVP--------HNYMIGAFVFGDLAGAHAAGTLAEVPAPGELPADQLAEAHELIYRPLRHPDGPPQPQVE 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 479 LAMQKCMQNNCAVYRTGETL----EEGSKLIHEVWAARDRVgvtdrsliwNSDLVETLEFDNLIVQAVVTMDGALNRTES 554
Cdd:PRK13800 447 YKLRRFVNDYVAPPKTAAKLsiavETFERMAAEIAGMGART---------PHELMRCAEVSFIRDCAEMAARSSLTRTES 517
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 519018380 555 RGA--HAREDFTERDDKTWMKH-TLASIDDHArkVEIDYRPVHSY 596
Cdd:PRK13800 518 RWGlyHDRADLPERDDASWGYHlNLRKGDDGE--MEFLKRPVAPY 560
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
24-438 |
2.00e-08 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 57.07 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 24 DHTFDVVIVGAGGAGLRATVGCSQAGLKTACISKVfPTRSHTVAAQGGV----------AASLANmGPDNWKWHMYDTVK 93
Cdd:PRK12844 4 DETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQ-DKVGGSTAMSGGVlwlpnnplmkAAGVPD-SHEDALAYLDAVVG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 94 GSDWLGDQDSIEYMVRNAPAAVYELEHWGVPFSRTE------------------------DGRI----YQRPFGGMTTDF 145
Cdd:PRK12844 82 DQGPASSPERREAYLRAGPAMVSFLEHQGMRFARCEgwsdyypdlpggeargrsleakpfDARKlgpwFDRLNPPMATPP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 146 G---------------KGPPAQRTCA------AADR--------TGHAILHTLYGQALRYNTEFFIEYFAIDLIMEEGRC 196
Cdd:PRK12844 162 GtvvmtdeykwlqlikRTPRGMRTAArvgartLAARirgqklltNGAALIGRMLEAALAAGVPLWTNTPLTELIVEDGRV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 197 RGVVCLKldDGTIHRFRSQL-VILATGGYG------RAYFSA------TSAHTC-TGDG--NAMVLRAGLPLQDMEF--- 257
Cdd:PRK12844 242 VGVVVVR--DGREVLIRARRgVLLASGGFGhnaemrKRYQPQpnsgdwTNANPGdTGEVieAAMRLGAALDLMDEAWwvp 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 258 VQFHPTGIYGAGCLITEGARgEGGYLTNAEGERFMER---YAPSVKDLAPRDMVSRAMTLEIREGR-------------- 320
Cdd:PRK12844 320 GAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEVGRAMYAQDAVPAWMIMDSRYRKrylfgtippgptpq 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 321 -----GVGKQKDHIN--LHLDHLDPAILH---ERLPGISESA-------------KIFAgvDVTKEPIPVLPTV----HY 373
Cdd:PRK12844 399 ewldsGYMKRADTIEelAGKTGIDPAGLAatvERFNGFAATGtdpdfhrgesaydRYYG--DPTNKPNPSLGPLdkppFY 476
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 519018380 374 NM----------GGIPTNYHGEVLTKQGGdpdvVVPGLMAIGEAAcVSVHGANRLGSNSLI-DLVVFGRAAALRAA 438
Cdd:PRK12844 477 AVrmvpgdvgtsGGLLTDEHARVLREDGS----VIPGLYATGNCT-ASVMGRTYPGAGASIgNSFVFGYIAALHAA 547
|
|
| MnmG |
COG0445 |
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal ... |
24-222 |
1.29e-05 |
|
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440214 [Multi-domain] Cd Length: 626 Bit Score: 48.08 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 24 DHTFDVVIVGAGGAGLRATVGCSQAGLKTACISkvfptrsH---TVAAQ------GGVAaslanmgpdnwKWHMydtVKG 94
Cdd:COG0445 4 PKEYDVIVVGGGHAGCEAALAAARMGAKTLLLT-------HnldTIGQMscnpaiGGIA-----------KGHL---VRE 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 95 SDWLGDQdsieyMVRNAPAAvyelehwGVPFsrtedgRIYQRpfggmttdfGKGPPAQRTCAAADRTghailhtLYGQAL 174
Cdd:COG0445 63 IDALGGE-----MGRAADKT-------GIQF------RMLNT---------SKGPAVRAPRAQADRK-------LYRAAM 108
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 519018380 175 RY---NTE--FFIEYFAIDLIMEEGRCRGVVclkLDDGTihRFRSQLVILATG 222
Cdd:COG0445 109 REtleNQPnlDLIQGEVEDLIVEDGRVTGVV---TADGI--EFRAKAVVLTTG 156
|
|
| GIDA |
pfam01134 |
Glucose inhibited division protein A; |
28-227 |
2.19e-05 |
|
Glucose inhibited division protein A;
Pssm-ID: 250388 [Multi-domain] Cd Length: 391 Bit Score: 47.16 E-value: 2.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 28 DVVIVGAGGAGLRATVGCSQAGLKTACISkvfpTRSHTVAAQ------GGVAASLAnmgpdnwkwhmydtVKGSDWLG-- 99
Cdd:pfam01134 1 DVIVIGGGHAGCEAALAAARMGAKVLLIT----HNTDTIAELscnpsiGGIAKGHL--------------VREIDALGgl 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 100 -----DQDSIEYMVRNApaavyelehwgvpfsrtedgriyqrpfggmttdfGKGPPAQRTCAAADRTG--HAILHTLYGQ 172
Cdd:pfam01134 63 mgkaaDKTGIQFRMLNT----------------------------------SKGPAVRALRAQVDRDLysKEMTETLENH 108
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 519018380 173 alrYNTEFFIEyFAIDLIMEEGRCRGVVclkLDDGTIhrFRSQLVILATGGYGRA 227
Cdd:pfam01134 109 ---PNLTLIQG-EVTDLIPENGKVKGVV---TEDGEE--YKAKAVVLATGTFLNG 154
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
171-299 |
3.31e-04 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 43.49 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 519018380 171 GQALRYNTEFfieyfaIDLIMEEGRCRGVVCLKLDDGTIHRFRsQLVILATGG----------YGRAYFSA---TSAHTC 237
Cdd:PRK07843 222 GVPVLLNTPL------TDLYVEDGRVTGVHAAESGEPQLIRAR-RGVILASGGfehneqmrakYQRAPIGTewtVGAKAN 294
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 519018380 238 TGDGNAMVLRAGLPLQDMEFVQFHPTGIYGAG---CLiTEGARgEGGYLTNAEGERFMERYAPSV 299
Cdd:PRK07843 295 TGDGILAGEKLGAALDLMDDAWWGPTIPLPGGpwfAL-SERNL-PGSIIVNMSGKRFMNESAPYV 357
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
24-55 |
3.51e-04 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 43.54 E-value: 3.51e-04
10 20 30
....*....|....*....|....*....|..
gi 519018380 24 DHTFDVVIVGAGGAGLRATVGCSQAGLKTACI 55
Cdd:COG1249 1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALV 32
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
25-55 |
1.10e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 41.83 E-value: 1.10e-03
10 20 30
....*....|....*....|....*....|.
gi 519018380 25 HTFDVVIVGAGGAGLRATVGCSQAGLKTACI 55
Cdd:PRK06327 3 KQFDVVVIGAGPGGYVAAIRAAQLGLKVACI 33
|
|
| glycerol3P_GlpB |
TIGR03378 |
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ... |
27-56 |
2.77e-03 |
|
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]
Pssm-ID: 213807 Cd Length: 419 Bit Score: 40.39 E-value: 2.77e-03
10 20 30
....*....|....*....|....*....|
gi 519018380 27 FDVVIVGAGGAGLRATVGCSQAGLKTACIS 56
Cdd:TIGR03378 1 FDVIIIGGGLAGLSCALRLAEAGKKCAIIA 30
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
26-57 |
3.25e-03 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 40.16 E-value: 3.25e-03
10 20 30
....*....|....*....|....*....|..
gi 519018380 26 TFDVVIVGAGGAGLRATVGCSQAGLKTACISK 57
Cdd:COG3075 2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIVSA 33
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
27-57 |
9.24e-03 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 38.68 E-value: 9.24e-03
10 20 30
....*....|....*....|....*....|.
gi 519018380 27 FDVVIVGAGGAGLRATVGCSQAGLKTACISK 57
Cdd:PRK05329 3 FDVLVIGGGLAGLTAALAAAEAGKRVALVAK 33
|
|
| |
