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Conserved domains on  [gi|505740934|ref|WP_015702567|]
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Bcr/CflA family multidrug efflux MFS transporter [Pasteurella multocida]

Protein Classification

multidrug effflux MFS transporter( domain architecture ID 13022939)

multidrug resistance (MDR) MFS transporter is a drug/H+ antiporter (DHA) that mediates the efflux of one or more from a variety of drugs and toxic compounds, and confer resistance to these compounds

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
15-391 3.66e-97

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 294.87  E-value: 3.66e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  15 ICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIA 94
Cdd:cd17320    1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  95 CSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLA 174
Cdd:cd17320   81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 175 LIGVVCWLIAYFFLAETnQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDY 254
Cdd:cd17320  161 LLGLLLLLLVLLFLPET-LPEEKRKPLLSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQF 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 255 GFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLA---DTDSLFAIMLPLFIFVGLTGAITPNVMTS 331
Cdd:cd17320  240 GLLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAallGGLSLWPLVAPLFLIFFGFGLIFPNATSL 319
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 332 LLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMIT 391
Cdd:cd17320  320 ALEPFPHVAGTASALLGFLQFLIGALAGALVGLLPNGTALPMGLLILVLGLLALLLLILL 379
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
15-391 3.66e-97

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 294.87  E-value: 3.66e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  15 ICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIA 94
Cdd:cd17320    1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  95 CSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLA 174
Cdd:cd17320   81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 175 LIGVVCWLIAYFFLAETnQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDY 254
Cdd:cd17320  161 LLGLLLLLLVLLFLPET-LPEEKRKPLLSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQF 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 255 GFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLA---DTDSLFAIMLPLFIFVGLTGAITPNVMTS 331
Cdd:cd17320  240 GLLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAallGGLSLWPLVAPLFLIFFGFGLIFPNATSL 319
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 332 LLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMIT 391
Cdd:cd17320  320 ALEPFPHVAGTASALLGFLQFLIGALAGALVGLLPNGTALPMGLLILVLGLLALLLLILL 379
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
26-397 1.27e-84

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 262.54  E-value: 1.27e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  26 PLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLL 105
Cdd:PRK11102   4 PLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 106 VARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAY 185
Cdd:PRK11102  84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 186 FFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGI 265
Cdd:PRK11102 164 FFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 266 VLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSL--FAIMLPLFIFVGLTGAITPNVMTSLLKQHSHAAGAA 343
Cdd:PRK11102 244 FVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLgfWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTA 323
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 505740934 344 MALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMITLKPNSI 397
Cdd:PRK11102 324 SSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYLYASRPKKK 377
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
13-388 1.10e-76

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 242.29  E-value: 1.10e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   13 ALICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVAS 92
Cdd:TIGR00710   5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   93 IACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL 172
Cdd:TIGR00710  85 LGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  173 LALIGVVCWLIAYFFLAETNQDRhqRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQ 252
Cdd:TIGR00710 165 LSLAGILLSALIFFILPETLPYE--ARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPS 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  253 DYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPL--FIFVGLT-GAITPNVM 329
Cdd:TIGR00710 243 VFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIgpMMFVGIGnSMISSIAM 322
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934  330 TSLLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGF 388
Cdd:TIGR00710 323 AYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCLVLAVVSVLAF 381
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
1-334 1.86e-49

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 170.54  E-value: 1.86e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   1 MPVATNTTWNQTALICFLGTLVGFGplsIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRII 80
Cdd:COG2814    1 MPATPRRRWLALLALALGAFLSGLG---IGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRV 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  81 LLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIV 160
Cdd:COG2814   78 LLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 161 LLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRplnlgtFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTP 240
Cdd:COG2814  158 ADLFGWRWVFLVNAVLALLALLLLLRLLPESRPAARAR------LRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLP 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 241 FVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAemGLVALAGMAFFLADTDSLFAIMLPLFIFVGL 320
Cdd:COG2814  232 LYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLI--GLLLLALGLLLLALAGSLWLLLLALFLLGFG 309
                        330
                 ....*....|....
gi 505740934 321 TGAITPNVMTSLLK 334
Cdd:COG2814  310 FGLLFPLLQALVAE 323
MFS_1 pfam07690
Major Facilitator Superfamily;
27-333 1.95e-27

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 111.36  E-value: 1.95e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   27 LSIDMYLPSLP-TIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLL 105
Cdd:pfam07690  10 LGRSLLGPALPlLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  106 VARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAY 185
Cdd:pfam07690  90 VLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILSLLAAVLLL 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  186 FFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPfVYIDYFHIPPQDYGFYFGINVVGI 265
Cdd:pfam07690 170 LPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLP-LYQEVLGLSALLAGLLLGLGGLLG 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934  266 VLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMTSLL 333
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALV 316
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
15-391 3.66e-97

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 294.87  E-value: 3.66e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  15 ICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIA 94
Cdd:cd17320    1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  95 CSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLA 174
Cdd:cd17320   81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 175 LIGVVCWLIAYFFLAETnQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDY 254
Cdd:cd17320  161 LLGLLLLLLVLLFLPET-LPEEKRKPLLSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQF 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 255 GFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLA---DTDSLFAIMLPLFIFVGLTGAITPNVMTS 331
Cdd:cd17320  240 GLLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAallGGLSLWPLVAPLFLIFFGFGLIFPNATSL 319
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 332 LLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMIT 391
Cdd:cd17320  320 ALEPFPHVAGTASALLGFLQFLIGALAGALVGLLPNGTALPMGLLILVLGLLALLLLILL 379
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
26-397 1.27e-84

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 262.54  E-value: 1.27e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  26 PLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLL 105
Cdd:PRK11102   4 PLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 106 VARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAY 185
Cdd:PRK11102  84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 186 FFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGI 265
Cdd:PRK11102 164 FFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 266 VLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSL--FAIMLPLFIFVGLTGAITPNVMTSLLKQHSHAAGAA 343
Cdd:PRK11102 244 FVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLgfWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTA 323
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 505740934 344 MALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMITLKPNSI 397
Cdd:PRK11102 324 SSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYLYASRPKKK 377
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
13-388 1.10e-76

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 242.29  E-value: 1.10e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   13 ALICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVAS 92
Cdd:TIGR00710   5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   93 IACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL 172
Cdd:TIGR00710  85 LGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  173 LALIGVVCWLIAYFFLAETNQDRhqRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQ 252
Cdd:TIGR00710 165 LSLAGILLSALIFFILPETLPYE--ARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPS 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  253 DYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPL--FIFVGLT-GAITPNVM 329
Cdd:TIGR00710 243 VFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIgpMMFVGIGnSMISSIAM 322
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934  330 TSLLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGF 388
Cdd:TIGR00710 323 AYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCLVLAVVSVLAF 381
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
25-396 1.40e-51

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 177.39  E-value: 1.40e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  25 GPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQL 104
Cdd:PRK11043  18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 105 LVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSM-MQLVTmLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCwLI 183
Cdd:PRK11043  98 LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATiMPLVA-LSPALAPLLGAWLLNHFGWQAIFATLFAITLLL-IL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 184 AYFFLAETNQDRHQRPLNLGtffqaYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHiPPQDYGFYFginvV 263
Cdd:PRK11043 176 PTLRLKPSKKARKQSQDALT-----FKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGY-SPADIGLSY----V 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 264 GIVLATLINNY----CVKRYAVQRVLMAEMGLVALAGMAFFLA---DTDSLFAIMLPLFIFVGLTGAITPNVMTSLLKQH 336
Cdd:PRK11043 246 PQTIAFLVGGYgcraALQKWGGEQLLPWLLVLFAVSVIAIWLAsllSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 337 SHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMITLKPNS 396
Cdd:PRK11043 326 PQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGSVMLSTVVLVALGYMLQRKAEW 385
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
1-334 1.86e-49

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 170.54  E-value: 1.86e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   1 MPVATNTTWNQTALICFLGTLVGFGplsIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRII 80
Cdd:COG2814    1 MPATPRRRWLALLALALGAFLSGLG---IGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRV 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  81 LLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIV 160
Cdd:COG2814   78 LLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 161 LLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRplnlgtFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTP 240
Cdd:COG2814  158 ADLFGWRWVFLVNAVLALLALLLLLRLLPESRPAARAR------LRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLP 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 241 FVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAemGLVALAGMAFFLADTDSLFAIMLPLFIFVGL 320
Cdd:COG2814  232 LYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLI--GLLLLALGLLLLALAGSLWLLLLALFLLGFG 309
                        330
                 ....*....|....
gi 505740934 321 TGAITPNVMTSLLK 334
Cdd:COG2814  310 FGLLFPLLQALVAE 323
emrD PRK11652
multidrug transporter EmrD;
14-237 3.00e-34

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 130.80  E-value: 3.00e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  14 LICFLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASI 93
Cdd:PRK11652   9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  94 ACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLL 173
Cdd:PRK11652  89 VALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFL 168
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934 174 ALIGVVCWLIAYFFLAETNQDRHQRPlnlgTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVA 237
Cdd:PRK11652 169 LLLGAGVTFSMARWMPETRPADARRT----RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEA 228
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
14-314 5.24e-32

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 124.75  E-value: 5.24e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  14 LICFLgtLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASI 93
Cdd:PRK10473   6 LCSFA--LVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  94 ACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLL 173
Cdd:PRK10473  84 LCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 174 ALIGVVCWLIAYFFLAETNQDRHQRPLNLGTFFQAycgILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQD 253
Cdd:PRK10473 164 AAMGILVLLLSLFILKETRPARAPAASSKPRENSE---SLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGE 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934 254 YGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPL 314
Cdd:PRK10473 241 YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITL 301
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
27-333 1.24e-30

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 120.76  E-value: 1.24e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  27 LSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLV 106
Cdd:cd17325   10 LGYGIIIPILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 107 ARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYF 186
Cdd:cd17325   90 ARFLQGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 187 FLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIV 266
Cdd:cd17325  170 LLPEPRPPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPAQIGLLFGAQGLASA 249
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505740934 267 LATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTdslFAIMLPLFIFVGLTGAITPNVMTSLL 333
Cdd:cd17325  250 LSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATS---FWLLLLLLALLGLGLGLVFPATLALL 313
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
25-320 1.46e-30

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 120.36  E-value: 1.46e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  25 GPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQL 104
Cdd:cd17321    8 AALDVTIVNVALPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 105 LVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIA 184
Cdd:cd17321   88 IAARALQGIGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLINVPIGLVALLLA 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 185 yfflaetnqdrhqrplnlgtffqaycgilkqPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVG 264
Cdd:cd17321  168 -------------------------------RTFSGAVLAAFLLGAALGGLLFLLPLYLQGVLGYSPLQAGLALLPLALA 216
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934 265 IVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGL 320
Cdd:cd17321  217 MLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLLLLALLGADSSVWLLLPGLVLLGL 272
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
1-271 1.62e-29

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 116.06  E-value: 1.62e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   1 MPVATNTTWNQTALICFLGTLVGF-GPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRI 79
Cdd:COG0477    1 MSSTDAAPTRRRRRALLALALGTFlEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  80 ILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGI 159
Cdd:COG0477   81 VLLIGLLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 160 VLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGT 239
Cdd:COG0477  161 LVAALGWRWIFLINAPLGLLALVLRLRLPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALL 240
                        250       260       270
                 ....*....|....*....|....*....|..
gi 505740934 240 PFVYIDYFHIPPQDYGFYFGINVVGIVLATLI 271
Cdd:COG0477  241 LLLALLLLALLLLLALLLLAALLLLLLLLLLL 272
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
12-188 1.98e-29

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 117.29  E-value: 1.98e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  12 TALICFLGTLVGFGPlsiDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVA 91
Cdd:cd17323    1 VFIISFLTFVVTFGS---SIYSPALPQIAEDFHVSEEVANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIF 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  92 SIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFL 171
Cdd:cd17323   78 QIGCALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWIFW 157
                        170
                 ....*....|....*..
gi 505740934 172 LLALIGVVCWLIAYFFL 188
Cdd:cd17323  158 FLAIISGFCLILIFLFL 174
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
36-333 2.99e-28

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 113.80  E-value: 2.99e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:cd17324   22 LPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAH 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 116 GVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDR 195
Cdd:cd17324  102 GGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWRLLPSLPPKK 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 196 HQRPLNLGTFFqaycGILKQPQ---SFGNILCLSAMFGGMFAYVAgtpFVYIDYFHIPPQDYGFYFGINVVGIVLATLIN 272
Cdd:cd17324  182 PGSLGLLSSLL----LLLRNPRlrlAYLITFLLFGGFFALYTYLA---PFLTDVPGFSSSAIIGLLLLFGVAGVVGSPLA 254
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934 273 NYCVKRYAVQRVLMAeMGLVALAGMAFFLADTDSLFAIMlpLFIFVGLTGAITPNVMTSLL 333
Cdd:cd17324  255 GRLADRGGRRALLIA-LLLLAAALLLLTLLGPSPLLLLV--GLVLWGLGFFAAHSALQTRV 312
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
30-278 9.26e-28

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 113.11  E-value: 9.26e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  30 DMYLPSLPTIAQALHTSIEWVQLSVSTFLTGfcvGMLF---YGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLV 106
Cdd:PRK15402  30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAG---GMFLqwlLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTL 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 107 ARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYF 186
Cdd:PRK15402 107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 187 FLAETNQDRHqRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFY----FGINV 262
Cdd:PRK15402 187 AMPETAGRVG-EKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLqvpvFGALI 265
                        250
                 ....*....|....*..
gi 505740934 263 VG-IVLATLINNYCVKR 278
Cdd:PRK15402 266 AGnLTLARLTSRRPLRS 282
MFS_1 pfam07690
Major Facilitator Superfamily;
27-333 1.95e-27

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 111.36  E-value: 1.95e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   27 LSIDMYLPSLP-TIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLL 105
Cdd:pfam07690  10 LGRSLLGPALPlLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  106 VARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAY 185
Cdd:pfam07690  90 VLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILSLLAAVLLL 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  186 FFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPfVYIDYFHIPPQDYGFYFGINVVGI 265
Cdd:pfam07690 170 LPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLP-LYQEVLGLSALLAGLLLGLGGLLG 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934  266 VLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMTSLL 333
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALV 316
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
24-393 5.62e-27

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 110.35  E-value: 5.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  24 FGPLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQ 103
Cdd:cd17474   10 LAVLGVSIVDPILPAIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFAL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 104 LLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWfGWETQFLLLALIGVVCWLI 183
Cdd:cd17474   90 LLAGRALQGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLAAI-SWRYPFFLLAALIPVAFLA 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 184 AYFFLAET-NQDRHQRPLNLGTFFQAYCGILKQPQSFGNILClsamFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINV 262
Cdd:cd17474  169 ILFLLPEPkEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLY----FFLYFAFLTYLPFLLELLYGISPIIIGLLFAGWS 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 263 VGIVLATLINNYCVKRYAVQRVLMAeMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMTSLLKQ-HSHAAG 341
Cdd:cd17474  245 VLLALGSLFVGRLLKKRFGARRILV-IGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELaPEEERG 323
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 342 AAMALAASMQFAGGFVA---SGALSYFFNNSpqtmlWVMSTCAGVAIVGFMITLK 393
Cdd:cd17474  324 TASSLYNFVRFLGQAVGpllFGLLLEIFGLS-----APFLVGAAIALAAAVLLAL 373
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
12-394 6.11e-26

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 107.66  E-value: 6.11e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  12 TALICFLGTLVGFGplSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVA 91
Cdd:COG2223    6 VLLLATLAFFLAFG--VWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  92 SIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFL 171
Cdd:COG2223   84 LLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAFL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 172 LLALIGVVCWLIAYFFLAETNQDRHQ-RPLNLGTFFQAycgiLKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIP 250
Cdd:COG2223  164 ILGILLLVVAVLAWLFLRDPPAGAAAaAKASLRDQLEA----LRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLS 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 251 PQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGL--VALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNV 328
Cdd:COG2223  240 AATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALmaLGLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFAL 319
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 329 MTSLLKqhSHAAGAAMALAASMQFAGGFVASGALSYFFN--NSPQTMLWVMSTCAGVAIVGFMITLKP 394
Cdd:COG2223  320 VPDIFP--TKNAGAVYGLVGAAGGLGGFLGPLLFGALLDatGSYTAAFLVFAVLALVALVLTLLLYRR 385
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
35-184 2.01e-23

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 100.34  E-value: 2.01e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  35 SLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:cd17503   18 ALPTIMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFG 97
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 115 GGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIA 184
Cdd:cd17503   98 GGVLIPLAQTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFYINLPIGILALLLA 167
2_A_01_02 TIGR00880
Multidrug resistance protein;
55-191 3.78e-23

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 94.25  E-value: 3.78e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   55 STFLTGFCVGMLFYGPLS----DKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSF 130
Cdd:TIGR00880   1 GLLLAGYALGQLIYSPLSglltDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934  131 PPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAET 191
Cdd:TIGR00880  81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
14-394 2.79e-21

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 94.17  E-value: 2.79e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  14 LICFLGTLVGFgplsIDMYLPS--LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVA 91
Cdd:COG2271   13 ALLFLAYFLNY----LDRSNLSvaAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  92 SIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFL 171
Cdd:COG2271   89 TLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAAFL 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 172 LLALIGVVcWLIAYFFLAetnqdrhqrplnlgtffqaycgilkqpqsfgnILCLSAMFGGMFAYVAGTPFVYIDYFHIPP 251
Cdd:COG2271  169 ILGLPGLL-LALLRFWLL--------------------------------ALAYFLVYFALYGFLTWLPTYLVEVRGLSL 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 252 QDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMTS 331
Cdd:COG2271  216 AQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWAL 295
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934 332 LLKQ-HSHAAGAAMALAASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMITLKP 394
Cdd:COG2271  296 AAELfPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLR 359
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
31-331 7.86e-20

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 89.94  E-value: 7.86e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  31 MYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFL 110
Cdd:cd17504   14 MLSPALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 111 QAFGGGVGPvLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFlae 190
Cdd:cd17504   94 QGIGGAVFP-LAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVAVLLAALVPLI--- 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 191 tnqdrhqrPLNLgtffqaycgiLKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDyfhipPQDYGFYFGINVVGIVL--- 267
Cdd:cd17504  170 --------DLRL----------LRRRNVLLANITALLAGFGMFMVFQLLPQLLQL-----PTPTGFGLGITEAGLLLlpg 226
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505740934 268 ------ATLINNYCVKRYAVQRVLMAEMGL--VALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMTS 331
Cdd:cd17504  227 alvmliAGPLAGRLIARVGPRRVLLIGLVIsaVGLLLLALLHSSLWALVVALLLIGIGLGLAFASLPNIVVE 298
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
27-294 3.89e-19

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 88.34  E-value: 3.89e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  27 LSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLV 106
Cdd:PRK15403  30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLI 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 107 ARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYF 186
Cdd:PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 187 FLAETNQdRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGF-----YFGIN 261
Cdd:PRK15403 190 AMPETVK-RGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWtqvpvFGAVI 268
                        250       260       270
                 ....*....|....*....|....*....|...
gi 505740934 262 VVGIVLATLINNYCVKRYAVQRVLMAEMGLVAL 294
Cdd:PRK15403 269 VANAIVARFVKDPTEPRFIWRAVPIQLVGLALL 301
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
16-310 1.30e-18

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 86.49  E-value: 1.30e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  16 CFLGTLVGFgpLSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIAC 95
Cdd:cd17489    1 ILLANFFFF--LSFYLLLPVLPLYAHDLGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  96 SIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLAL 175
Cdd:cd17489   79 LLATSVALLLVLRLIHGIGWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 176 IGVVCWLIAyFFLAETNQDRHQRPLNLGTFFQAYcgILKQPQSFGNIlclsaMFGGMFAYVAGTPFVYIDYFHIPPQDYG 255
Cdd:cd17489  159 LALLALLLV-FLVKDPPPVAAEEAEAGTRAFRRL--VEKKVLPPALI-----LFLASIAYGAISTFLPLYAAERGISNAG 230
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 256 FYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAI 310
Cdd:cd17489  231 LFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLL 285
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
15-388 2.40e-18

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 85.94  E-value: 2.40e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  15 ICFLGTLVGFGPLSIDMYLPSlptIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIA 94
Cdd:cd06174    1 LLLGFFLTGLARGLISPLLPA---LLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  95 CSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLW--FGWETQFLL 172
Cdd:cd06174   78 FAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSlgFGWRAVFLI 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 173 LALIGVVCWLIAYFFLAETNQD--RHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIP 250
Cdd:cd06174  158 AAALALLAAILLLLVVPDPPESarAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLS 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 251 PQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMT 330
Cdd:cd06174  238 VAVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFAL 317
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 331 SLLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFN--NSPQTMLWVMSTCAGVAIVGF 388
Cdd:cd06174  318 IAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAatFGLTGAFLVLAVLLLLAAILL 377
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
4-394 4.14e-17

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 82.21  E-value: 4.14e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   4 ATNTTWNQTALICFLGTLVGFgplSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLI 83
Cdd:COG0738    2 SKKNYRRALIAIYLLFFLWGF---ATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  84 GMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRiTHVLSMMQLVTMLAPLLAPFIGGIVLLW 163
Cdd:COG0738   79 GLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETA-ASRLNLLHAFFSLGALLGPLLGGLLILL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 164 ---FGWETQFLLLALIGVVCWLIAYFF-LAETNQDRHQRPLNLGTFFqaycGILKQPQSfgnILCLSAMFGGMFAYVAG- 238
Cdd:COG0738  158 glsLSWHLPYLILAVLLLLLALLFLRSkLPEIEEEEEEAAGSAASLK----SLLKNPRL---LLGGLAIFLYVGAEGAIg 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 239 --TPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAeMGLVALAGMAFFLADTDSLFAIMlpLFI 316
Cdd:COG0738  231 dwLPLYLKDVLGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRL-SALLAAVGLLLALLAPGPWLALI--GLA 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 317 FVGL-TGAITPNVMTSLLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFNN-SPQTMLWVMSTCAGVAIVGFMITLKP 394
Cdd:COG0738  308 LVGLgLSLMFPTIFSLALDGLGKRTAAAVSAVLIMGIVGGAIGPPLIGFLADAfGLRAAFLVPLVCYLLILLLALALKRK 387
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
35-206 8.29e-17

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 82.04  E-value: 8.29e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   35 SLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:TIGR00711  24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  115 GGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQD 194
Cdd:TIGR00711 104 GGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA 183
                         170
                  ....*....|..
gi 505740934  195 RHQRPLNLGTFF 206
Cdd:TIGR00711 184 ASENFDFLGLLL 195
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
18-389 3.54e-16

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 79.18  E-value: 3.54e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  18 LGTLVGFGPLSIDMYLPSLPTIAQALHTSiewvqlsvSTFLTGFCVGM------LF---YGPLSDKYGRRIILLIGMTIY 88
Cdd:cd17472    1 LSLIFSLRMLGMFLVLPVLSVYAKSLPGA--------TPTLIGLALGIygltqaIFqipFGLLSDRIGRKPVILFGLLLF 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  89 IVASIACSIATSIEQLLVARFLQAFGGGVGPVLgrAIVRDSFPPQRITHVLSMMQLV----TMLAPLLAPFIGGIvllwF 164
Cdd:cd17472   73 IAGSLLAAYATSIYGLILGRALQGSGAISSVVM--ALLADLTREENRTKAMALIGASigiaFAISMVLGPLLAAH----L 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 165 GWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRPLNLGTFFQaycgILKQPQSFG---NILCLSAMFGGMFAYVagtPF 241
Cdd:cd17472  147 GVSGLFLITAILSLVSLLILLFFVPDPPKIVQISEKEKKKLKK----LLKNKRLLRldfSIFILHFVLMAFFYIL---PL 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 242 VYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVG-- 319
Cdd:cd17472  220 LLTQLGGGKGQLWKVYLPAILIGFILMVPFVIYAEKKGKMKQVFVSSILLIAVGFLLLLFAATSLWLLIIGLIIFFIGfn 299
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505740934 320 LTGAITPNVMTSLLKQHSHaaGAAMALAASMQFAGGFV--ASGALSYFFNNSPQTMLWVMSTCAGVAIVGFM 389
Cdd:cd17472  300 LLEALLPSLVSKIAPKEYR--GTAMGIYNTSQFLGSFLggALGGLLWGLLGYSSVFLTILILALLWLLVSFL 369
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
36-323 1.88e-15

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 77.28  E-value: 1.88e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:cd17328   22 LPDIQSDFLIDDSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGE 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 116 GVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIV-LLWFGWETQFLLLALIGVVCWLIAYFFLAETNQD 194
Cdd:cd17328  102 ASYSPIAPTIIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVaQATGGWRWAFRVTGVLGVLLAILLLLFVREPPRG 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 195 RHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMfAYVAGT------PFVYIDYFHIPPQDY--GFYFGI-----N 261
Cdd:cd17328  182 AAEGGVMAKSTATSFLADLKALAKNPSFILSTLGFTAV-SFVTGAlafwapTFFLRAFGVGDLSSAdvGLIFGAitciaG 260
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505740934 262 VVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGA 323
Cdd:cd17328  261 VLGVLLGGILADRLRRKTPRADPLVCAVGLLAAAPFLFLALVLALSNLLLAWVLLFLGEFLL 322
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
17-231 2.73e-15

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 76.57  E-value: 2.73e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  17 FLGTLVGFGPLSID--MYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIA 94
Cdd:cd17371    1 FWAAFLGWALDGFDllLLGLVLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  95 CSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQ--------LVTMLAPLLAPFIGGivllWFGW 166
Cdd:cd17371   81 CGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQsgwavgwlLATLLAALLFPLLPP----EIAW 156
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 167 ETQFLLLALIGVVCWLIAyFFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGG 231
Cdd:cd17371  157 RVLFLLGALPALLVLFIR-RFVKEPPQWQAARAARRHFADRPSLRELFSPPLLRTTLLASLLATG 220
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
36-317 2.77e-15

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 76.06  E-value: 2.77e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALH--TSIEWVqlsVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAF 113
Cdd:cd17502   19 LPTIVAEFGglSLVSWV---GTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGI 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 114 GGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL-LALIGVVCWLIAYFFLAetn 192
Cdd:cd17502   96 GGGGLMSLAFIIIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFYInLPIGGLALALLRTILLS--- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 193 qdrhqrplNLGTFFQAycgilkqpqsfgnilclsamfGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLIN 272
Cdd:cd17502  173 --------SIFGFLFG---------------------GALFGLIYYLPLYFQLVLGDSATKSGVRLLPLIIGLVIGSIIS 223
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 505740934 273 NYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIF 317
Cdd:cd17502  224 GALISKTGRYKPLIVIGTILMSVGAGLLTTLTLDTSKWLLIGYLI 268
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
6-190 3.91e-15

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 76.24  E-value: 3.91e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934    6 NTTWNQTALICFLGTLVGFGPLSIDMYlpSLPTIAQALhtSIEWVQLS--VSTFLTGFCVGMLFYGPLSDKYGRRIILLI 83
Cdd:TIGR00895  12 SRYQWRAIILSFLIMLMDGYDLAAMGF--AAPAISAEW--GLDPVQLGflFSAGLIGMAFGALFFGPLADRIGRRRVLLW 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   84 GMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLW 163
Cdd:TIGR00895  88 SILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167
                         170       180
                  ....*....|....*....|....*..
gi 505740934  164 FGWETQFLLLALIGVVCWLIAYFFLAE 190
Cdd:TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPE 194
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
34-392 2.03e-13

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 71.07  E-value: 2.03e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALH-TSIEWVQLSVStfLTGFCVGM--LFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFL 110
Cdd:cd17473   20 PALPAIAQHFVpNSELLVPLLLT--LPALFIALfaPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRAL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 111 QAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIvLLWFGWETQFLLLaLIGVVCWLIAYFFLAE 190
Cdd:cd17473   98 LGIGVAGIMTLATALIGDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGA-LAEIGWRAPFLVY-LLALPVLILVLLFLPE 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 191 TNQDRHQRPLNLGTffqaycgILKQPQSFGNILCLSAMFGGMFAY---VAGTPFVYIDYFHIPPQDYGFYFGINVVGIVL 267
Cdd:cd17473  176 PARKSKSAASPGAA-------TAAALPWKRVLPIYFLAFLAMLLFyviPIQLPFLLQERGGGSAALIGLALAIASLAGAI 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 268 ATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTdslFAIMLPLFIFVGL-TGAITPNVMTSLLKQHSHAAGAAMAL 346
Cdd:cd17473  249 GALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASG---LWVVLLGAILAGLgFGLLLPTLNSWAMSLVPPELRGRAMG 325
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 505740934 347 AASMQFAGGFVASGALSYFFNNSPQTMLWVMSTCAGVAIVGFMITL 392
Cdd:cd17473  326 IVTSAFFLGQFLSPLVLGPLVNLTGGLSGAFLILGVLALVLAIVLL 371
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
34-359 6.54e-13

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 69.52  E-value: 6.54e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAF 113
Cdd:COG2807   39 PLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGA 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 114 GGGVGPVLGRAIVRDSFpPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQ 193
Cdd:COG2807  119 GIAVGNVLLPGLIKRWF-PDRVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLWLPLLRRRPA 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 194 DRHQRPLNLGTFfqaycGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYfHIPPQDYGFYFGINVVGIVLATLINN 273
Cdd:COG2807  198 AAAAAPAAASLR-----SLWRSPLAWLLTLFFGLQSLLYYAVVAWLPPILRDA-GLSAATAGLLLSLFQLAGIPGSLLVP 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 274 YCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLplfIFVGLTGAITPNVMTSLLKQHSHAAGAAMALAASMQFA 353
Cdd:COG2807  272 LLADRLGDRRPLLLLLGLLGLAGLLGLLLAPGSLPWLWA---VLLGLGQGGLFPLALTLIGLRARTPAEAAALSGMAQSV 348

                 ....*.
gi 505740934 354 GGFVAS 359
Cdd:COG2807  349 GYLLAA 354
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
31-333 7.52e-13

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 69.18  E-value: 7.52e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  31 MYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIAT-----SIEQLL 105
Cdd:cd06173   17 IFTVALPWLVLQLTGSALLVGLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLAllgslSLWLLL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 106 VARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAY 185
Cdd:cd06173   97 VLAFLLGIASAFFGPARQALLPELVPKEQLVRANALNSLATQLARIIGPALGGLLVALLGPGGAFAINALSFLLSALLLL 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 186 FF-LAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVG 264
Cdd:cd06173  177 FIrRPPPAAPGESSSLLLRDLREGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVG 256
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934 265 IVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLAdtdSLFAIMLPLFIFVGLTGAITPNVMTSLL 333
Cdd:cd06173  257 ALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLS---PSLWLLLAALFLLGLAGGLFNVPLNTLL 322
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
35-330 1.54e-12

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 68.01  E-value: 1.54e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  35 SLPTIAQA--LHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQA 112
Cdd:cd17316   21 VAPVLAAEfsLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQG 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 113 FGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVL----LWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:cd17316  101 IGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIpllsGDWGWRILFLIGALPALLALLLRRRTL 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 189 aetnqdrhqrplnlgtffqaycgilkqpQSFGNILCLSAMFGGMFAYvagTPFVYIDYFHIPPQDYGFYFGINVVGIVLA 268
Cdd:cd17316  181 ----------------------------LLILLWFFISFGYYGLTTF---LPTYLQTVLGLSPATSSLYLLLISLGALVG 229
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505740934 269 TLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMT 330
Cdd:cd17316  230 ALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYA 291
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
35-188 8.34e-11

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 62.97  E-value: 8.34e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  35 SLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:cd17319   25 AAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVA 104
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934 115 GGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVcWLIAYFFL 188
Cdd:cd17319  105 EAGFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLL-LAVLWWFY 177
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
13-188 1.20e-10

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 62.21  E-value: 1.20e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  13 ALICFLGTLVGFGplSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVAS 92
Cdd:cd17330    1 LFLVVFLDALGFG--IVFPVLPFYVREFNKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSY 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  93 IACSIATSIEQLLVARFLQAFGGGVGPVLgRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL 172
Cdd:cd17330   79 VLLGLSRNLWLLFLARFLDGLTGGNVSVA-QAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLV 157
                        170
                 ....*....|....*.
gi 505740934 173 LALIGVVCWLIAYFFL 188
Cdd:cd17330  158 AAALALLNLVLVLFFL 173
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
39-310 1.48e-10

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 62.24  E-value: 1.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  39 IAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVG 118
Cdd:cd17329   26 LHQQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLF 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 119 PVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGiVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQR 198
Cdd:cd17329  106 EPASEAMIADVTTPENRTRAFSLLYWAINLGVAIGPLLGG-LLLLYSFRLLFLAAAVLFLLAALVLLFLLPETRPKRRAA 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 199 PLNLgtFFQAYcGILKQPQSFgnILCLSAMFGGMFAYVA---GTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYC 275
Cdd:cd17329  185 EKTE--ILRGY-KIVLRDRAF--LLFLLASFLISLIYFQlesTLPVYVVEILGLGESLLGLLLALNALLIVLLQFPVARL 259
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 505740934 276 VKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAI 310
Cdd:cd17329  260 VERFRLRKILMIGILLFAIGFAVLAFANTLAVLIL 294
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
11-191 2.14e-10

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 61.81  E-value: 2.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  11 QTALICFLGTLVGFGPLSIDMYLPSLptIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRR--IILLIGMTIY 88
Cdd:COG2271  181 RFWLLALAYFLVYFALYGFLTWLPTY--LVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLA 258
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  89 IVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWET 168
Cdd:COG2271  259 ALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQA 338
                        170       180
                 ....*....|....*....|...
gi 505740934 169 QFLLLALIGVVCWLIAYFFLAET 191
Cdd:COG2271  339 AFLLLAALALLAALLALLLLRET 361
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
136-329 2.18e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 61.84  E-value: 2.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 136 THVLSMMQLVTMLAPLLAPFIGGIVLLWF------GWETQFLLLALIGVVCWLIAYFFLAEtnqdRHQRPLNLGTFFQAY 209
Cdd:COG2211  146 TRLSSWRFAFAGLGGLLASVLPPPLVAAFggdaalGYRLTALIFAVLGLLAFLLTFFGTKE----RPVPEEEKVSLKESL 221
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 210 CGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEM 289
Cdd:COG2211  222 KALLKNRPFLLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGL 301
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 505740934 290 GLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVM 329
Cdd:COG2211  302 LLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPW 341
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
34-386 2.30e-10

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 61.57  E-value: 2.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAF 113
Cdd:cd17333   17 ILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 114 GGGVGPVLGRAIVRDSFPPQRIThVLSMMQLVTMLAPLLAPFIGGIVLLW-FGWETQFLLLALIGVVCWLIAYFFLAETN 192
Cdd:cd17333   97 GAGILDTGANTFVGALFEESSAT-RLNVLHGFFGLGALIGPLIATSLLTSeLSWSWAYLIIGLIYLLLAILILLTLFPEL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 193 QDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLIN 272
Cdd:cd17333  176 PSARNPQQSVGAFSASASRLLRNPSIILGALALFLYVGAETAFSSWVPSYLVEKKHVSDGLAGYLLSGFWVGITIGRLLG 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 273 NYCVKRYAVQRVLMAEMGLVALAGMAFFLADTdslFAIMLPLFIFVGL-TGAITPNVMTSLLKQHSHAAGAAMALAASMQ 351
Cdd:cd17333  256 GPISRRIKPHTLLVLSGSGALLGLLILLLAPT---LVVGLVATALLGLfMAALFPTILSLGISNLPYAKGKGTSVLLAAG 332
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 505740934 352 FAGGFVASGALSYFFNN-SPQTMLWVMSTCAGVAIV 386
Cdd:cd17333  333 SIGGAIIPFIMGFIAEAvGIQTAMLLITILYAIIFV 368
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
36-180 6.44e-10

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 60.29  E-value: 6.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG- 114
Cdd:cd17365   22 APALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGl 101
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 115 GGVGPVLGrAIVRDSFPPQRithvLSMMQLVTMLAPLLAPFIGGIVLLW----FGWETQFLLLALIGVVC 180
Cdd:cd17365  102 GAAMPNAI-TLVSEYAPARR----RSLAVTLMFCGYPLGAALGGFLAAAlipaFGWRSVFLLGGVPPLIL 166
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
34-322 1.06e-09

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 59.56  E-value: 1.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAF 113
Cdd:cd17475   17 ALAPFLQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGA 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 114 GGG-VGPVLGRAIVRdSFPPQRITHVLSMMQ----LVTMLAPLLAPFIGgivlLWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:cd17475   97 GYGsVQPGGGRAIMR-WFPPRERGLAMGIRQtgvpLGGALAAALLPPLA----LHYGWRAAFVVAGLVSILAAVLFWLFY 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 189 AETNQDRHQRPLNLGTFFQaycgiLKQPQSFGNILCLS----AMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGI---- 260
Cdd:cd17475  172 REPPAASAATESASTLLRS-----LKEVLRNRDVWLIAiagaLLVAPQFALLTFLLLFLHDHLGLSVVAAGALLAVaqlg 246
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505740934 261 NVVGIVLATLINNYCVK-RYAVQRVLMAEMGLVALAGMAFFLADTdsLFAIMLPLFIFVGLTG 322
Cdd:cd17475  247 GALGRIGLGRVSDRVFGgRRRPVLVITAAIAAAALLVLSLLSPGT--PLWLLVLLLILLGLFA 307
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
69-386 1.26e-09

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 59.48  E-value: 1.26e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  69 GPLSDK-YGRRIILLIGMTIYIVASIACSIATSIEQLL-VARFLQAFGGGVGPVLgRAIVR---DSFPPQRITHVLSMMQ 143
Cdd:cd17471   53 GRLSDRgGDRKPLILLALLAGALGYLLFAFLRNYWVLLlVGVVLLSLGAAAFPQL-FALAReyaDRSSGRDATLFNSVLR 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 144 LVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRPLNLGTFFQaycgiLKQPQSFGNIL 223
Cdd:cd17471  132 AAFSLAWVIGPPLAFLLLDVLGFTGLFLLAALLYLVVALLVLFLLPSVKPPAQKATPASSLVKA-----PVNRRLLLLFA 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 224 CLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMglvaLAGMAFF--L 301
Cdd:cd17471  207 AFTLLFAANSMYIIAMPLYVTNELGGSESWVGLLFGLAAALEIPIMLLAGLLAKRFGKRRLLLAGF----LAGVLFYlgL 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 302 ADTDSLFA-IMLPLF--IFVGLTGAITPNVMTSLLKQHSHAAGAAMALAASMQFAGGFVASGALSYFFnnSPQTMLWVMS 378
Cdd:cd17471  283 ALATSLWQlIALQLLnaIFIGITAGLGISYFQDLMPGQPGLATTLYSNASRIGSLLGGLLAGVIAQYF--GYRAVFLVCA 360

                 ....*...
gi 505740934 379 TCAGVAIV 386
Cdd:cd17471  361 VLALLALV 368
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
39-330 1.67e-09

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 59.21  E-value: 1.67e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  39 IAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG--GG 116
Cdd:cd17355   29 IIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLLWGLLGGGgaGT 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 117 VGPVLGRAIVRDSFPPQRIThVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRH 196
Cdd:cd17355  109 LAAVAFATVAAWWFERRRGL-ALGILTAGGGLGSLVFLPLGAALIEAFGWRTALLVLALLALLVLVPVLLLLRRRPADLA 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 197 QRPLNLG---TFFQAYCGILKQPQ----SFGNILCLSAMFGgmfayVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLAT 269
Cdd:cd17355  188 LRAYDDAspaSPGSTLKEALRSASfwllALAFFLCGFAVVG-----LIVHLVPYLADRGISPAAAAVALALIGLFNIVGR 262
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934 270 LINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITPNVMT 330
Cdd:cd17355  263 LLSGWLGDRYSPRRLLAASYALRALGLALLLLLPFPPLALLLFAALFGLGWGATVPLTAAL 323
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
16-190 1.84e-09

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 58.82  E-value: 1.84e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  16 CFLGTLvgFGPLSIDMYLPSLPT-IAQALHTSIEWVQL-SVSTFLTGFCVGMLF---YGPLSDKYGRRIILL---IGMTI 87
Cdd:cd17391    1 CWLGNF--FTGIGFSLIAPFLPLyIEQLGVTSGGLVELwSGLAFSSTFLVSAIFspiWGRLADRYGRKPMLLrasLGMAI 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  88 YIvasIACSIATSIEQLLVARFLQAFGGGVGPVlGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWE 167
Cdd:cd17391   79 VI---GLMAFVTNVWQLLILRLLQGVFSGYVPN-ATALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIR 154
                        170       180
                 ....*....|....*....|...
gi 505740934 168 TQFLLLALIGVVCWLIAYFFLAE 190
Cdd:cd17391  155 NVFFITGGLLFLAFLLTLFFVKE 177
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
43-212 2.75e-09

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 58.35  E-value: 2.75e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  43 LHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLG 122
Cdd:cd17315   29 FGLSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVLV 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 123 RAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIG-GIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETnqdrhqRPLN 201
Cdd:cd17315  109 PLYISEIAPAKIRGALGTLNQLMITFGILLAYLLGlALSLSPPGWWRLMFALAAVPALLQLLLMFFLPES------RALL 182
                        170
                 ....*....|....
gi 505740934 202 LGT---FFQAYCGI 212
Cdd:cd17315  183 VGVglqLLQQLTGI 196
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
8-190 1.01e-08

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 56.95  E-value: 1.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934    8 TWNQTALIC-FLGTLVGFG----PLSIDMYLPSLPTIAQALHTsiEW---------VQLSVSTFLTGFCVGMLFYGPLSD 73
Cdd:TIGR00898  75 QWANPSLLGcEPLKLSDLGlaatEPCLDGWEYSYDTFSSTIVT--EWdlvcedawkVDLTQSCFFVGVLLGSFVFGYLSD 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   74 KYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGG----VGPVLGRAIVRDSFppQRITHVLSMM--QLVTM 147
Cdd:TIGR00898 153 RFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGgiwvQAVVLNTEFLPKKQ--RAIVGTLIQVffSLGLV 230
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 505740934  148 LAPLLAPFIGgivllwfGWETQFLLLALIGVVCwLIAYFFLAE 190
Cdd:TIGR00898 231 LLPLVAYFIP-------DWRWLQLAVSLPTFLF-FLLSWFVPE 265
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
14-188 1.53e-08

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 56.05  E-value: 1.53e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  14 LICFLGTLVGFGPLSidMYLPSLPTIAQAL-HTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVAS 92
Cdd:cd17325  202 LALFLAIFVLAFAFG--ALEPFLPLYAAELgGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVAL 279
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  93 IACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL 172
Cdd:cd17325  280 LLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLA 359
                        170
                 ....*....|....*.
gi 505740934 173 LALIGVVCWLIAYFFL 188
Cdd:cd17325  360 AAALLLLAAVLFLLLR 375
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
34-187 1.92e-08

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 56.10  E-value: 1.92e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIE--WVqlsVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQ 111
Cdd:cd06179   19 AVLPFIVADLGPSSNstWI---STAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALI 95
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 112 AFGGGvGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLL--WFGWETQFLLLALIGVVCWLIAYFF 187
Cdd:cd06179   96 GIGAG-TQGLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVEanAAGWRWIFYINAIFNALALILLFFF 172
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
3-188 5.43e-08

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 54.52  E-value: 5.43e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   3 VATNTTWNQTALICFLGTLVGFGPLSIDMYLpslptIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILL 82
Cdd:COG2211  224 LLKNRPFLLLLLAYLLFFLALALVAALLLYY-----FKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFI 298
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  83 IGMTIYIVASIACSIA--TSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITH-------VLSMMQLVTMLAPLLA 153
Cdd:COG2211  299 IGLLLAALGLLLLFFLgpGNLWLLLVLAALAGIGLGAILVLPWAMLADVVDYDEWKTgrrreglYFGIFTFAIKLGQALA 378
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 505740934 154 PFIGGIVLLWFGWETQ-----------FLLLALIGVVCWLIAYFFL 188
Cdd:COG2211  379 GALAGLLLALFGYVAGaaqspsaltgiRLLFFLLPAVLLLLAALLL 424
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
31-187 1.10e-07

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 53.39  E-value: 1.10e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  31 MYLPSLPTIAQ-ALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARF 109
Cdd:cd06173  226 ALTVLLPLLAKeVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALF 305
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 110 LQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFF 187
Cdd:cd06173  306 LLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGLSAVFLLAGALLLLAALLLLLL 383
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
27-326 1.10e-07

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 53.41  E-value: 1.10e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  27 LSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGP----LSDKYGRRIILLIGMTIYIVASIACSIATSIE 102
Cdd:cd17388   13 MGIGLIMPVLPTLLREFVGDSADAATHYGVLLALYALMQFIFAPilgaLSDRFGRRPVLLLSLAGAALDYLLMAFAPTLW 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 103 QLLVARFLQAFGGGVGPVLGRAIVrDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGivLLW-FGWETQFLLLALIGVVCW 181
Cdd:cd17388   93 WLYLGRIIAGITGATGAVAAAYIA-DVTPPEQRARNFGLLGAAFGLGFIAGPALGG--LLGeISPRAPFLVAAGLNGLNF 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 182 LIAYFFLAETnQDRHQRPLNLGTFFQAYcGILKQPQSFGNILCLSAMFG--GMFAYVAGTPFVY--IDYFHIPPQDYGFY 257
Cdd:cd17388  170 LLGLFVLPES-LPPERRRAFRWRRANPF-GSLRWLTGFPGLLGLLAVFFliQLIGQVPATTWVLftEDRFDWSPTMVGLS 247
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 258 FGI-NVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLfaiMLPLFIFVGLTGAITP 326
Cdd:cd17388  248 LAVfGLLHALFQAFVTGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWM---VFPILILLALGGIAGP 314
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
49-114 1.34e-07

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 52.97  E-value: 1.34e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934  49 WVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:cd17317   26 LVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVT 91
PRK10504 PRK10504
putative transporter; Provisional
35-179 2.38e-07

putative transporter; Provisional


Pssm-ID: 182502 [Multi-domain]  Cd Length: 471  Bit Score: 52.43  E-value: 2.38e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  35 SLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:PRK10504  32 ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVG 111
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 115 GGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVV 179
Cdd:PRK10504 112 GAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGII 176
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
36-186 2.63e-07

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 52.18  E-value: 2.63e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:cd17359   24 LPFLQTDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAV 103
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934 116 GVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLA--------PFIGGIVLLWFGWETQFLLLALIGVVCWLIAYF 186
Cdd:cd17359  104 GGASALVPMYIAEVAPAEIRGRLVSLNQLMIVFGQLLAyivnyliaNAGGADWLGAEGWRWMLGLEAIPAILFLLGMLF 182
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
9-190 6.15e-07

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 51.07  E-value: 6.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   9 WNQTALICFLGTLVGFGPLSIDMylPSLPTIAQAL----HTSIE-WVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILL- 82
Cdd:PRK09874  12 WKRNLTVAWLGCFLTGAAFSLVM--PFLPLYVEQLgvtgHSALNmWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLr 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  83 --IGMTIYIVAsiaCSIATSIEQLLVARFLQAFGGGVGPVlGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIV 160
Cdd:PRK09874  90 saLGMGIVMVL---MGLAQNIWQFLILRALLGLLGGFVPN-ANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165
                        170       180       190
                 ....*....|....*....|....*....|
gi 505740934 161 LLWFGWETQFLLLALIGVVCWLIAYFFLAE 190
Cdd:PRK09874 166 ADSYGLRPVFFITASVLFLCFLVTLFCIRE 195
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
11-189 1.04e-06

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 50.26  E-value: 1.04e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  11 QTALICFLGTLVGFGPLSIDMYLPSLptIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIV 90
Cdd:COG2223  206 RFWLLSLLYFGTFGSFIGFSSWLPPY--LVDQFGLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMAL 283
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  91 ASIACSIAT-SIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFG-WET 168
Cdd:COG2223  284 GLLLLALALgSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGsYTA 363
                        170       180
                 ....*....|....*....|.
gi 505740934 169 QFLLLALIGVVCWLIAYFFLA 189
Cdd:COG2223  364 AFLVFAVLALVALVLTLLLYR 384
2A0114 TIGR00893
D-galactonate transporter; [Transport and binding proteins, Carbohydrates, organic alcohols, ...
52-196 1.18e-06

D-galactonate transporter; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273326 [Multi-domain]  Cd Length: 399  Bit Score: 50.03  E-value: 1.18e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   52 LSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFL-QAFGGGVGPVLGRaIVRDSF 130
Cdd:TIGR00893  33 YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLlGAAEAPFFPGIIL-IVASWF 111
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934  131 PPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRH 196
Cdd:TIGR00893 112 PASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
28-233 1.48e-06

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 49.91  E-value: 1.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  28 SIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRR-IILLIGMTIYIVASIACSIATSIEQLLV 106
Cdd:cd17490   11 SQYVYVPFLSPYAESLGASLSMIGIILGAYGISQMLLRIPLGILSDRIGKRkLFIIIGLLFTVLASLIMILFPSPWGLLI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 107 ARFLQAFGGG---VGPVLGRAIvrdsFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLI 183
Cdd:cd17490   91 ARFLSGIAAAtwvSFTVLYASY----FPPDEAAKAMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPFLLAALAGVLGFIL 166
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 505740934 184 AyFFLAETNQDRHQRPlnlgTFFQAYCGILKQPQ----SFGNILCLSAMFGGMF 233
Cdd:cd17490  167 S-LFIKEERREKKPVL----TELKELLSVLKDKKllffSLLAILQQMITFSTTF 215
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
36-188 1.71e-06

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 49.57  E-value: 1.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:cd17476   21 LPIIGDSFGTSPNQLSWLAASYSLTVGTFILIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSPNFIFFIICRALQGLGP 100
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934 116 GVGPVLGRAIVRDSFPPQRITHVLSMmqLVTMLAPL---LAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:cd17476  101 AFLLPNAMALLGRTYPPGPRKNIVFS--LFGATAPLgfaLGGVFGGLFAQLAWWPWIFWFLAILAAIVAVAAIFWT 174
Sugar_tr pfam00083
Sugar (and other) transporter;
52-121 1.86e-06

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 49.58  E-value: 1.86e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505740934   52 LSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASI---ACSIATSIEQLLVARFLQAFGGGVGPVL 121
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVlqgAAKGKWSVYQLIVGRVLVGIGVGGASVL 122
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
67-188 2.06e-06

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 49.57  E-value: 2.06e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  67 FYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLqaFGGGVGPVLG--RAIVRDSFPPQRITHVLSMMQL 144
Cdd:cd17391  259 RLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFL--LGLATGGLLPaiNSLLAKITPKEVAGRIFGYNQS 336
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 505740934 145 VTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:cd17391  337 FQYLGNVAGPLLGSAIAAHFGYRAVFVVTALLVLLNAIWSFIFL 380
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
32-187 2.52e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 49.11  E-value: 2.52e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  32 YLPSLptIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDK-YGRRIILLIGMTIYIVASIACSIATSIEQLLVARFL 110
Cdd:cd17474  220 YLPFL--LELLYGISPIIIGLLFAGWSVLLALGSLFVGRLLKKrFGARRILVIGLLLYALSLLLLGFVPSLALLLIAIVL 297
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505740934 111 QAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFF 187
Cdd:cd17474  298 FGLGLGLNLPLLTTLVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAAIALAAAVLLALL 374
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
36-192 4.83e-06

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 48.04  E-value: 4.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:cd17312   26 KPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQ 105
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 116 GVG-PVLGRAIVRDSFPPQRIThVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETN 192
Cdd:cd17312  106 SMGwPPCVKLLGNWFSKKERGT-VYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGIVGLVVAIILFFFLRDSP 182
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
49-118 5.45e-06

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 48.04  E-value: 5.45e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  49 WVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVG 118
Cdd:cd17360   36 WQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGIA 105
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
49-189 8.32e-06

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 47.55  E-value: 8.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  49 WVQlsvSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIA--TSIEQLLVARFLQAFGGGVGPVLGRAIV 126
Cdd:cd17380   38 LVL---SSFFWGYALTQVLGGYLADRFGGKKVLLLAVALWSLATLLTPLLaySSLPLLILSRILLGLGEGVHFPSMTSLF 114
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505740934 127 RDSFPPQR----ITHVLSMMQLVTMLAPLLAPfiggIVLLWFGWETQFLLLALIGVVcWLIAYFFLA 189
Cdd:cd17380  115 SRWVPVSErsraVSIVTAGSYLGTLLGGLIGP----LLLEYYGWPSVFYFFGLLGLL-WALVWLIYL 176
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
50-110 1.33e-05

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 46.70  E-value: 1.33e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934  50 VQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFL 110
Cdd:cd17377   41 VSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFL 101
PRK10091 PRK10091
MFS transport protein AraJ; Provisional
36-179 1.36e-05

MFS transport protein AraJ; Provisional


Pssm-ID: 182234 [Multi-domain]  Cd Length: 382  Bit Score: 47.01  E-value: 1.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG 115
Cdd:PRK10091  26 LTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPH 105
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934 116 GVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVV 179
Cdd:PRK10091 106 GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIA 169
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
37-170 2.08e-05

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 46.49  E-value: 2.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  37 PTIAQALHTSIE---WVqLSVSTFltGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAF 113
Cdd:PRK11551  39 PRMAQEFGLDVAqmgWA-FSAGIL--GLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 114 G-GGVGPVLgRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQF 170
Cdd:PRK11551 116 GlGGALPNL-IALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIF 172
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
44-118 2.34e-05

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 46.10  E-value: 2.34e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934  44 HTSIEWvQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASI---ACSIATSIEQLLVARFLQAFGGGVG 118
Cdd:cd17357   46 ELDLLW-SLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLlmfLSKSAKSPELLIFGRFLVGIACGLS 122
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
36-187 4.58e-05

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 45.25  E-value: 4.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  36 LPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYG-RRIILLIGMTIYIVASIACSIATSIEQLLVArFLQAFG 114
Cdd:COG2807  238 LPPILRDAGLSAATAGLLLSLFQLAGIPGSLLVPLLADRLGdRRPLLLLLGLLGLAGLLGLLLAPGSLPWLWA-VLLGLG 316
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 115 GGVGPVLGRAIVRDSFPPQRITHVLS-MMQLVTMLAPLLAPFIGGIVLLWFG-WETQFLLLALIGVVCWLIAYFF 187
Cdd:COG2807  317 QGGLFPLALTLIGLRARTPAEAAALSgMAQSVGYLLAALGPLLVGALHDATGsWTAALLLLAALAVLMLVAGLLA 391
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
34-320 5.39e-05

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 44.93  E-value: 5.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIA-TSIEQLLVARFLQA 112
Cdd:cd17341   20 PLGPVIRDDLGLSTSQIGLLVAIPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALALAvSSYWGLLVLGFLLG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 113 FGGGVGpVLGRAIVRDSFPPQRITHVL----SMMQLVTMLAPLLAPFIGGIVLLW---FGWETQFLLLALIGVVCWLIAY 185
Cdd:cd17341  100 FAGANF-ASGQPWASFWFPKEKIGGAAggiaGAGNMGVAVSQLLAPLIAGAIVFDggfVGWRNAFFVPGILLAIAAVLVL 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 186 FFLAETNQDRHQRPLNLGTFFQAycgiLKQPQSFgnILCL--SAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVV 263
Cdd:cd17341  179 LFGDDLPTGKASALEFLKVQLAV----LKNYRTW--ILSLlyGVTFGSFVGFSNVLPTYFKTRFGLPLVTAGILAALFPL 252
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 505740934 264 GIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLADTDSLFAIMLPLFIFVGL 320
Cdd:cd17341  253 AGALARPAGGWLSDRFGGRRRLWWLFIVMTIGAALLSLSLPTSGTNLVLFLALFVAL 309
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
27-326 5.82e-05

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 44.86  E-value: 5.82e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  27 LSIDMYLPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLV 106
Cdd:cd17477   10 LGSGLLLPLLSLRLEREGVSTALIGLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 107 ARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLwFGWETqFLLLALIGVVCWLIAYF 186
Cdd:cd17477   90 LRFVMGIGLAGLFVVSESWLNALATNENRGRVLGLYSTVLGLGFALGPLLLALVGT-AGALP-FLIAAVLLLLALVPLLL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 187 FLAETNQDRHQRPLNLGTFFQaycgilKQPQSFGNILCLSAMFGGMFAYVAgtpfVYIDYFHIPPQDYGFYFGINVVGIV 266
Cdd:cd17477  168 TRRAAPEIEEAESISLRRLLR------IAPLALLGAFVAGFLEGAFYSLLP----LYGLRLGLSVAQAALLLAAFVLGGL 237
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 267 LATLINNYCVKRYAVQRVLMAeMGLVALAGMAFFLADTDSLFAIMLPLFIFVGLTGAITP 326
Cdd:cd17477  238 LLQWPLGWLADRFDRRRVLLG-CALLGALAALLLPLVPGLPLALLVLLFLWGGAAGPLYT 296
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
51-114 6.34e-05

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 44.59  E-value: 6.34e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934  51 QLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:cd17374   38 SVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFA 101
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
52-208 8.29e-05

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 44.55  E-value: 8.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  52 LSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIV-ASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSF 130
Cdd:cd17356   49 LIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIYIIgAIIQVAAIGKWYQLIVGRIIAGLGVGFASVLVPVYQSEVA 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 131 PPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGwETQFLL---LALIGVVCWLIAYFFLAETnqDRHQRPLNLGTFFQ 207
Cdd:cd17356  129 PKHIRGTLVSLYQLAITIGILVAYCINYGTHKLDG-SAQWRIplgLQIVWGLLLLIGMFFLPES--PRWLYRTILGIMLQ 205

                 .
gi 505740934 208 A 208
Cdd:cd17356  206 L 206
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
21-190 8.77e-05

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 44.14  E-value: 8.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  21 LVGFGPL-SIDMYLPSLPTIAQALHTSiewvqlSVSTFLTGFCVGM--LFYGP----LSDKYGRRIILLIGMTIYIVASI 93
Cdd:cd17390    3 LVGFLDLfGVSMILPLLSTHIRSLGAS------PTVIGLIGSVYGAlqLFSSPlvgsWSDVVGRRPVLLICLLLTALGYV 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  94 ACSIATSIEQLLVARFLQ-AFGGGVGpvLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWF-GWETQFL 171
Cdd:cd17390   77 LLGFSTSLALLFLSRIPLgIFKHTQS--LCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVGGHLAETDgGFYYVAL 154
                        170
                 ....*....|....*....
gi 505740934 172 LLALIGVVCWLIAYFFLAE 190
Cdd:cd17390  155 LCSAIFILNAGLVWFLLSK 173
MFS_3 pfam05977
Transmembrane secretion effector; This is a family of transport proteins. Members of this ...
69-314 1.22e-04

Transmembrane secretion effector; This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.


Pssm-ID: 399164 [Multi-domain]  Cd Length: 523  Bit Score: 43.97  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   69 GPLSDKYGRRIILLIGMTIYIVASIACSIAT-----SIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQ 143
Cdd:pfam05977  66 GALADNFDRRKIMLAGQLLLALVSTLLTLLAglgllSPWLLLGLTFLGGIGTALMDPAWQASVPELVPRRDLPAAVALNS 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  144 LVTMLAPLLAPFIGGIVLLWFGWETQFLLLALigvvCWLIAYFFLAETNQDRHQRPLNLGTFFQAYCGILKQPQS---FG 220
Cdd:pfam05977 146 VGYNIARSVGPALGGVLLAAFGPAFTFALNAL----SYFAVIAALWRWKRAAPASPLPRERIFGAVRAGLRFTAMsreLR 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  221 NILCLSAMFG-GMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAF 299
Cdd:pfam05977 222 SVLVRAFAFGlSASAVWALLPLVARDLLDGDAIFYGILLGAVGVGAILGALSLPRLRERLGSDRLVLLASVVTALVLLSL 301
                         250
                  ....*....|....*
gi 505740934  300 FLADTDSLFAIMLPL 314
Cdd:pfam05977 302 ALAPNLWLAIPVLLL 316
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
57-188 1.45e-04

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 43.74  E-value: 1.45e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  57 FLTGFCVGML----FYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPP 132
Cdd:cd17489  232 FFTVYAIALLlsrpFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPP 311
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934 133 QRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:cd17489  312 HRRGAANGTFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYIFLL 367
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
144-326 1.77e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 43.36  E-value: 1.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 144 LVTMLAPLLAPFIGGIVLLwFGWETQFLLLALIGVVCWLIAYFFLAETNQDrHQRPLNLGTFFQAYCGILKQPQSFgnIL 223
Cdd:cd17332  151 LVTVLPPPLVAYFGGGNAS-RGYFLTALIIGIIGIILLLICFFGTRERVVP-PEEEKSKLPLLKSLKALLKNRPFL--IL 226
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 224 CLSAMFGGM-FAYVAGTPFVYIDYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLA 302
Cdd:cd17332  227 LLAYLLYFLaFNIVNTVLVYYFKYVLGGRAELVLLLLLILSGALLALLPWPPLKKRFGKKKAFFIGLLLAILGLLLLFFL 306
                        170       180
                 ....*....|....*....|....
gi 505740934 303 DTDSLFAIMLPLFIFVGLTGAITP 326
Cdd:cd17332  307 PPGNLVLILVLAVLAGIGYGGANL 330
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
22-330 2.01e-04

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 42.93  E-value: 2.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  22 VGFGPLSIDMY----LPSLPTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSI 97
Cdd:cd17478    1 LSLGHFLNDFYqgflPALLPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  98 ATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRIThVLSMMQLVTMLAPLLAPFIGGIVLLWFGWEtQFLLLALIG 177
Cdd:cd17478   81 APNYWLLLLLVALAGIGSAAFHPEGARLASQAAGGRRGL-AMSIFSVGGNLGFALGPLIAAALVALFGGL-GLLILLIIP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 178 VVCWLIAYFFLAETNQDRHQRPLNLGTFFQAYCGILKqpqSFGNILCL----SAMFGGMFAYVagtPFVYIDYFhIPPQD 253
Cdd:cd17478  159 GLAVALLLLRLRPLKKPEAKKAAAKSSARSTLKGVWR---ALLLLLIIvflrSWVLSSLTTFL---PFYLVQRG-YSLVF 231
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505740934 254 YGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFFLAdtdSLFAIMLPLFIFVGLTGAITPNVMT 330
Cdd:cd17478  232 AGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLT---PGIWSYILLVLAGFLLFASFPVTVV 305
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
57-175 2.28e-04

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 42.84  E-value: 2.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  57 FLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGvGPVLGRAIVRDSF--PPQR 134
Cdd:cd17445   45 FILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAASPSLFMAMRFLLGAALA-GVYLTLYLTRLELcdPPQR 123
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 505740934 135 IthvlsmmqLVTMLAPLLApfIGGivllwfgwetQFLLLAL 175
Cdd:cd17445  124 L--------LVAMAGGLTM--VGG----------HFLLLGL 144
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
63-333 2.53e-04

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 42.98  E-value: 2.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  63 VGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVAR----FLQAFGGgvgpvlGRAIVRDSFPPQRITHV 138
Cdd:cd17331   50 VGGPLFGRFGDLFGPRAALVLSFLSSALSYLLLAFASSVPMLFLSRlpsvFMHAMQA------AQMVVTDLTDPGERAAA 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 139 LSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFL-AETNQDRHQR----PLNLGTFFQAYCGIL 213
Cdd:cd17331  124 LGRLGLSYGIGMVVGSFLGGLLTKKFGEQAAALVAAVGSLLSIVLVILLIpSNTKSKREKEakesASPPSVFNLKEILRL 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 214 KQPQSFGNIL-------CLSAMFGGMFAYVAgtpfvyIDYFHIPPQDYGF---YFGInvVGIVLATLINNYCVKRYAVQR 283
Cdd:cd17331  204 LRLPGVAFLLlvkllsgLPIGMFQSMFSLVA------MDFFGLTPEENGYlmsYAGV--LGMVVQGLLVGPLTKRFGERS 275
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 505740934 284 VLMAEMGLVALAGMAFFLADTDSLFAIMLplfIFVGLTGAITPNVMTSLL 333
Cdd:cd17331  276 LLKLSVALLAIGYLLLAFVTTVWQLLVLL---LPLVIGGSVLYTVITSLL 322
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
14-179 2.82e-04

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 42.53  E-value: 2.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  14 LICFLGTLVGFGPLSIDMYLpslpTIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASI 93
Cdd:cd17370  204 LYLLAVALFALGNFSFAFLI----LRAQELGLSAALIPLLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYL 279
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  94 ACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLL 173
Cdd:cd17370  280 GFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWDLISPSAAFLFS 359

                 ....*.
gi 505740934 174 ALIGVV 179
Cdd:cd17370  360 AVLALI 365
PRK14995 PRK14995
SmvA family efflux MFS transporter;
26-203 3.01e-04

SmvA family efflux MFS transporter;


Pssm-ID: 184957 [Multi-domain]  Cd Length: 495  Bit Score: 42.79  E-value: 3.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  26 PLSIDMYL--PSLPTIAQALHTS---IEWVQLSVSTFLTGFCVGMlfyGPLSDKYGRRIILLIGMTIYIVASIACSIATS 100
Cdd:PRK14995  17 PVAIDATVlhVAAPTLSMTLGASgneLLWIIDIYSLVMAGMVLPM---GALGDRIGFKRLLMLGGTLFGLASLAAAFSPT 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 101 IEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHV-LSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLL-LALIGV 178
Cdd:PRK14995  94 ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMaLGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLInVPIVLV 173
                        170       180
                 ....*....|....*....|....*
gi 505740934 179 VCWLIAYFFlaETNQDRHQRPLNLG 203
Cdd:PRK14995 174 VMGLTARYV--PRQAGRRDQPLNLG 196
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
54-200 3.47e-04

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 42.36  E-value: 3.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   54 VSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQ 133
Cdd:TIGR00881  36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934  134 RITHVLSMMQLVTMLAPLLAPFIGGIVLLWF-GWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRPL 200
Cdd:TIGR00881 116 ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELySWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPA 183
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
17-204 4.09e-04

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 42.15  E-value: 4.09e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  17 FLGTLVGFGPLSIDMYLPSLPTIAQALHTSIEWVQL--SVSTFLTGFCvgMLFYGPLSDKYGRR-IILLIGMTIYIVASI 93
Cdd:cd17370    3 LLGLVSLFADISYEMARSILPLFLVVLGASAAAVGLieGLAEALGSLL--RLFSGYLSDRTGKRkPLVILGYGLSALAKP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  94 ACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQ--FL 171
Cdd:cd17370   81 LLALAGSWQLVLLLRILERLGKGIRTPPRDALLADATPPSGRGKAFGLHRALDTLGAVLGPLLAALLLYLLGGNYRtiFL 160
                        170       180       190
                 ....*....|....*....|....*....|...
gi 505740934 172 LLALIGVVCWLIAYFFLAETNQDRHQRPLNLGT 204
Cdd:cd17370  161 LAAIPALLALLILLFVVKEYPRPPKLRKKSKKT 193
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
52-118 5.62e-04

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 41.83  E-value: 5.62e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  52 LSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACS---IATSIEQLLVARFLQAFGGGVG 118
Cdd:cd17432   54 LTVSIFPLGGLFGSLLVGPLVIRLGRKGTLLLNNIFAIVAAILMGlskIAKSFEMIIVGRFLVGINAGIS 123
MFS_SLC18A3_VAChT cd17383
Vesicular acetylcholine transporter (VAChT) and similar transporters of the Major Facilitator ...
67-176 8.15e-04

Vesicular acetylcholine transporter (VAChT) and similar transporters of the Major Facilitator Superfamily; Vesicular acetylcholine transporter (VAChT) is also called solute carrier family 18 member 3 (SLC18A3) in vertebrates and uncoordinated protein 17 (unc-17) in Caenorhabditis elegans. It is a glycoprotein involved in acetylcholine transport into synaptic vesicles and is responsible for the accumulation of acetylcholine into pre-synaptic vesicules of cholinergic neurons. Variants in SLC18A3 are associated with congenital myasthenic syndrome in humans. VAChT belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340941 [Multi-domain]  Cd Length: 378  Bit Score: 41.14  E-value: 8.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  67 FYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFP--PQRiTHVLSMMQL 144
Cdd:cd17383   49 FSGTLIDRVGYDIPMMIGLTVMFLSTAVFAFGESYAVLFFARSLQGVGSAFADTAGLAMIADRFTeeAER-SKALGIALA 127
                         90       100       110
                 ....*....|....*....|....*....|..
gi 505740934 145 VTMLAPLLAPFIGGIVLLWFGWETQFLLLALI 176
Cdd:cd17383  128 FISFGCLVAPPFGGILYEFAGKEVPFLILAFV 159
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
51-114 8.48e-04

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 41.25  E-value: 8.48e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934  51 QLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG 114
Cdd:cd17447   38 QATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGFA 101
2A0114euk TIGR00894
Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]
55-190 9.44e-04

Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]


Pssm-ID: 129972 [Multi-domain]  Cd Length: 465  Bit Score: 41.27  E-value: 9.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   55 STFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIAT--SIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPP 132
Cdd:TIGR00894  83 SSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAggGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP 162
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934  133 QRITHVLSMMQLVTMLAPLLAPFIGGIVL-LWFGWETQFLLLALIGVVCWLIAYFFLAE 190
Cdd:TIGR00894 163 KERSRLLGMSTSGFQLGTFIFLPISGWLCeSWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
60-169 1.02e-03

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 41.12  E-value: 1.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   60 GFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG-GGVGPVLGRAIVRDSFPPQRITHv 138
Cdd:TIGR01299 214 GMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGiGGAIPIVFSYFAEFLAQEKRGEH- 292
                          90       100       110
                  ....*....|....*....|....*....|.
gi 505740934  139 LSMMQLVTMLAPLLAPFIGGIVLLWFGWETQ 169
Cdd:TIGR01299 293 LSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ 323
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
64-187 1.21e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 40.67  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  64 GMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARF-LQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMM 142
Cdd:cd17353  265 GRPFWGWLSDKIGRKNTLSIAFLIQGVAMFLLPFIGSVAVLFVLGVaLIGFCYGGGFALFPALTADFFGTKNAGTNYGLL 344
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 505740934 143 QLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFF 187
Cdd:cd17353  345 YTAKGVGGLIGPIIAAYVLYTGGYNAAFIIAAALSLVALALALLL 389
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
50-191 1.26e-03

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 40.60  E-value: 1.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  50 VQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLgrAIVRDS 129
Cdd:cd17372   36 VALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLGLGGGPQL--ASWYLE 113
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505740934 130 FPPQRI-THVLSMMQLVTMLAPLLAPFIGGIVLLWFGWEtQFLLLALIGVVCWLIAYFFLAET 191
Cdd:cd17372  114 FLPAKSrGTWMVLFSVFWTVGTIFEASLAWLVMPRLGWR-WLLAFSSVPSSLLLVFYRWTPKT 175
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
48-183 1.86e-03

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 40.14  E-value: 1.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  48 EW-VQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGG----GVGPVLG 122
Cdd:cd17376   34 DWkVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSFLQIFSPSWEMFTVLFVIVGMGQisnyVVAFVLG 113
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505740934 123 RAIVRDSFppqRITH----VLSMMQLVTMLAPLLAPFIGgivllwfGWETQFLLLALIGVVC----WLI 183
Cdd:cd17376  114 TEILGKSV---RILFstlgVCIFYAIGYMLLPLFAYFIR-------DWRMLLLALTLPGVLCvplwWFI 172
MFS_YdiM_like cd17396
Inner membrane transport protein YdiM and similar proteins of the Major Facilitator ...
21-179 2.41e-03

Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily contains Escherichia coli inner membrane transport proteins YdiM and YdiN, which belong to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340954 [Multi-domain]  Cd Length: 384  Bit Score: 39.64  E-value: 2.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  21 LVGFGPLSIDMYLPSLptiAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATS 100
Cdd:cd17396   11 VHGMGVIILAQNMSSL---SEKWHTDVAGVAYVISGIGIGRLLTILFAGVLSDKFGRKPSVLLGMVLYALFFVGILFSPN 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 101 IEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVL---SMMQLVTMLAPLLAPFIgGIVLLWFGWetQFLLLALIG 177
Cdd:cd17396   88 LIIAYVFALLAGAANSFLDTGTYPALMEAFPKASGSANIlvkAFVSFGQFLLPFIIAFL-AANNLWYGW--SFIVPAAVL 164

                 ..
gi 505740934 178 VV 179
Cdd:cd17396  165 VL 166
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
63-117 2.47e-03

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 39.87  E-value: 2.47e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505740934  63 VGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGV 117
Cdd:cd17358   56 IGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGA 110
PRK03545 PRK03545
putative arabinose transporter; Provisional
71-188 2.60e-03

putative arabinose transporter; Provisional


Pssm-ID: 179591 [Multi-domain]  Cd Length: 390  Bit Score: 39.49  E-value: 2.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  71 LSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSFPPQRITHVLSMMQLVTMLAP 150
Cdd:PRK03545  67 LTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAM 146
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 505740934 151 LLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFL 188
Cdd:PRK03545 147 VLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLL 184
TRI12 pfam06609
Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific ...
35-186 3.14e-03

Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.


Pssm-ID: 115279 [Multi-domain]  Cd Length: 598  Bit Score: 39.65  E-value: 3.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   35 SLPTIAQALHTSiEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVArfLQAFG 114
Cdd:pfam06609  66 ALPNILQDIGQS-ENQGLFSTLWTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAA--MTLLG 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  115 GGVGPVLGRAIvrdsFPPQRITHVLSMMQLVTMLAPLLA-----PFIGGIVLLWFGWETQF---LLLALIGVVCWLIAYF 186
Cdd:pfam06609 143 VAAGPAGASPL----FIGELMSNKTKFLGLLIVSAPTIAmngagPYFGQRLAIQGNWRWIFyiyIIMSAIAVLLIIIWYH 218
MFS_SLC46A1_PCFT cd17449
Solute carrier family 46 member 1, also called Proton-coupled folate transporter, of the Major ...
58-210 3.90e-03

Solute carrier family 46 member 1, also called Proton-coupled folate transporter, of the Major Facilitator Superfamily of transporters; Solute carrier family 46 member 1 (SLC46A1) is also called proton-coupled folate transporter (PCFT), G21, or heme carrier protein 1 (HCP1). It functions in two ways: as an intestinal proton-coupled high-affinity folate transporter that facilitates the absorption of folates across the brush-border membrane of the small intestine; and as an intestinal heme transporter which mediates heme uptake from the gut lumen into duodenal epithelial cells. It displays a higher affinity for folate than heme. It is also expressed in the choroid plexus and is required for transport of folates into the cerebrospinal fluid. Loss of function mutations in the SLC46A1 gene results in the autosomal recessive disorder "hereditary folate malabsorption" (HFM), characterized by severe systemic and cerebral folate deficiency. SLC46A1 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341007 [Multi-domain]  Cd Length: 425  Bit Score: 39.02  E-value: 3.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  58 LTGFCVGML---FYGPLSDKYGRRIILLI---GMTIY-IVASIACSIATSIEQLLVARFLQAFGGGVGPVLGR--AIVRD 128
Cdd:cd17449   72 LGGFLVGLFsvtLLGPWSDSVGRRPVLILpslGLALQaAVYLLVMYLQLHVAYFLIGRILSGLLGDFNGILAGcfAYVAD 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 129 SFPPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDRHQRPLNLGTFFQA 208
Cdd:cd17449  152 VSDRRSRTFRVAVLEACLGLAGMLASIIGGQWRKAQGYINPFWLVLALNLAAALYAAFCVGESVKEPKSARLFTTRHHQS 231

                 ..
gi 505740934 209 YC 210
Cdd:cd17449  232 VV 233
MFS_SLC37A4 cd17343
Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute ...
53-195 4.22e-03

Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 37 member 4 (SLC37A4), one of four SLC37 family proteins in vertebrates, is better known as glucose-6-phosphate transporter (G6PT). It is also called sugar phosphate exchanger 4 (SPX4), G6P translocase, or transformation-related gene 19 protein (TRG-19). G6PT is a phosphate (Pi)-linked G6P antiporter, catalyzing G6P:Pi and Pi:Pi exchanges. Deficiencies in human G6PT lead to glycogen storage disease type Ib (GSD-Ib), which is a metabolic and immune disorder. G6PT is a member of the Organophosphate:Pi antiporter (OPA)/SLC37 family, whose members are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340901 [Multi-domain]  Cd Length: 409  Bit Score: 38.85  E-value: 4.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  53 SVSTFLTGFcvgmlfygpLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFGGGVG-PVLGRaIVRDSFP 131
Cdd:cd17343   52 AISKFIGGV---------LSDQISARWLFSSGLVLSGLTTVAFSGSSSVWVFSILWFLNGLAQGLGwPPCAK-ILRKWFS 121
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505740934 132 PQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAETNQDR 195
Cdd:cd17343  122 PSQFGTWWSVLSTSMNLAGSLGPILATLLALSYGWRSTLSISGTVAVVMSVVCLLFIKNEPSDV 185
PRK03699 PRK03699
putative transporter; Provisional
222-325 4.98e-03

putative transporter; Provisional


Pssm-ID: 235151 [Multi-domain]  Cd Length: 394  Bit Score: 38.75  E-value: 4.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934 222 ILCLSAMFGGMFAYVAGTPFVYI-DYFHIPPQDYGFYFGINVVGIVLATLINNYCVKRYAVQRVLMAEMGLVALAGMAFF 300
Cdd:PRK03699  11 ISFLSYALTGALVIVTGMVMGPIaEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLM 90
                         90       100
                 ....*....|....*....|....*
gi 505740934 301 LadTDSLFAIMLPLFIfVGLTGAIT 325
Cdd:PRK03699  91 F--SHSLALFSIAMFV-LGVVSGIT 112
2A0108 TIGR00886
nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]
38-320 5.83e-03

nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]


Pssm-ID: 273322 [Multi-domain]  Cd Length: 354  Bit Score: 38.44  E-value: 5.83e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934   38 TIAQALHTSIEWVQLSVSTFLTGFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIAT-SIEQLLVARFLQAFGGG 116
Cdd:TIGR00886  27 LIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDIFGPRYTTALSLLLLAIPCLWAGLAVqSYSVLLLIRLFIGIAGG 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  117 vGPVLGRAIVRDSFPPQRITHVL-----------SMMQLVT-MLAPLLAPFIGGIVLLWFGWEtqflLLALIGVVCWLIA 184
Cdd:TIGR00886 107 -SFASCMPWISFFFPKKIQGTALglaagwgnmggGVAQFVMpPIIGSLIFGGGQPAHLAWGWA----FVIVPAGILLLPA 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  185 YFFLAETNQDRHQRPLNLGTFFQAYCGILKQPQSFGNILCLSAMFGGMFAYVAGTPFVYIDYFHIPPQDYGFYFGINVVG 264
Cdd:TIGR00886 182 LLIFFVGADTPPGKPATGKLSFKEALKVFGNRHTWILALLYSVTFGSFLGVSSIFAMLFKDQFGLSKVQAGAYASLGGFL 261
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505740934  265 IVLATLINNYCVKRYAVQRVLMAEMGLVAL--AGMAFFLADTDSL---FAIMLPLFIFVGL 320
Cdd:TIGR00886 262 GSLARPAGGAISDRLGGARKLLMNFLGVAMgaFLVVLGLVSDGSLaafIVLFVALFFFAGA 322
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
60-191 6.85e-03

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 38.36  E-value: 6.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  60 GFCVGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLQAFG-GGVGPVLGRAIVRDSFPPQRITHv 138
Cdd:cd17440   46 GMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFLSSFVQGYGLFLFCRLLSGFGiGGAVPTVFSYFAEVLAREKRGEH- 124
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505740934 139 LSMMQLVTMLAPLLAPFIGGIVLLWFGWETQ------------FLLLALIGVVCWLIAYFFLAET 191
Cdd:cd17440  125 LSWLCMFWMIGGIYASAMAWAIIPHYGWSFSmgsayqfhswrvFVIVCALPCVSSVVALTFMPES 189
MFS_NIMT_CynX_like cd17339
2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator ...
34-182 7.09e-03

2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340897 [Multi-domain]  Cd Length: 374  Bit Score: 38.33  E-value: 7.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  34 PSLPTIAQALHTSIewVQLSVSTFLTGFCVGMLfyGPLSDKYGRRI---ILLIGMTIYIVASIACSIATSIEQLLVARFL 110
Cdd:cd17339   20 PLLPEIRDDLGLSA--SQAGLLTTLPLLCFAVF--SPLAPRLARRFgleRTLLLALLLLAAGILLRSLGGIALLFLGTAL 95
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505740934 111 QAFGGGVGPVLGRAIVRDSFPPQ--RITHVLSM-MQLVTMLAPLLAPFIGGIVLLWFGWETQFL-LLALIGVVCWL 182
Cdd:cd17339   96 AGAGIAVGNVLLPSLIKRDFPRRvgLMTGLYTTsMNLGAALASGLSVPLAQALGGGWRGALAIWaLPALLALLIWL 171
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
73-190 7.13e-03

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 38.41  E-value: 7.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  73 DKYGRRIILLIGMTIYIVASIACSIATSIeqLLVARFLQAFGGGVGPVlGRAIVRDSFPPQRITHVLSMMQLVTMLAPLL 152
Cdd:cd17360  248 DKFGRRKLLLISLFGVIVALVVLAVWLAL--VGLILYLAFFAPGMGPV-PWTVNSEIYPLWARGTGGGCAAAVNWVFNLL 324
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 505740934 153 APFIGGIVLLWFGWETQFLLLALIGVVCWLIAYFFLAE 190
Cdd:cd17360  325 VSQTFLTLTQAIGPYGTFLLFAGLAVLGLIFIYFCVPE 362
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
63-198 8.62e-03

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 38.21  E-value: 8.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  63 VGMLFYGPLSDKYGRRIILLIGMTIYIVASIACSIATSIEQLLVARFLqaFGGGVGPV--LGRAIVRDSFPPQRITHVLS 140
Cdd:COG2270  289 LGALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAFWILGLL--IGLVMGGIqaLSRSLLARLIPPGREAEFFG 366
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505740934 141 MMQLVTMLAPLLAPFIGGIVLLWFGweTQFLLLALIgVVCWLIAYFFLAETNQDRHQR 198
Cdd:COG2270  367 LYALSGKAASFLGPLLFGLVTQLTG--SQRLGILSL-IVFFVIGLVLLLRVKVPRGRA 421
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
53-179 8.67e-03

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 37.98  E-value: 8.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505740934  53 SVSTFLTGFCVGmlfygPLSDKYGRRI-ILLIGMTIYIVASIAC-SIATSIEQLLVARFLQAFGGGVGPVLGRAIVRDSF 130
Cdd:cd17390  218 GVLGALSGFLVG-----RILKLYKNNEyLLLLHSFILLALSLLGlALAPSIWLLVLCLTPLSISSAVLRTCSTSLLLSRG 292
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 505740934 131 PPQRITHVLSMMQLVTMLAPLLAPFIGGIVLLWFGWETQFL--LLALIGVV 179
Cdd:cd17390  293 KSKERGTLLGVGQSVTSLARILAPLLSGLLQEFSVSGPGLLgaVLALAAIL 343
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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