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c-type cytochrome [Belliella baltica]
c-type cytochrome( domain architecture ID 10440489)
c-type cytochrome containing cytochrome c (mono- and diheme) and class III cytochrome c (or c3) tetraheme domains
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
45-129 | 1.36e-13 | |||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. : Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 66.02 E-value: 1.36e-13
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Cytochrom_C3 | cd08168 | Heme-binding domain of the class III cytochrome C family and related proteins; This alignment ... |
250-378 | 1.58e-13 | |||
Heme-binding domain of the class III cytochrome C family and related proteins; This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm). : Pssm-ID: 173979 [Multi-domain] Cd Length: 85 Bit Score: 65.72 E-value: 1.58e-13
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Name | Accession | Description | Interval | E-value | |||
Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
45-129 | 1.36e-13 | |||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 66.02 E-value: 1.36e-13
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Cytochrom_C3 | cd08168 | Heme-binding domain of the class III cytochrome C family and related proteins; This alignment ... |
250-378 | 1.58e-13 | |||
Heme-binding domain of the class III cytochrome C family and related proteins; This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm). Pssm-ID: 173979 [Multi-domain] Cd Length: 85 Bit Score: 65.72 E-value: 1.58e-13
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CccA | COG2010 | Cytochrome c, mono- and diheme variants [Energy production and conversion]; |
16-129 | 9.64e-08 | |||
Cytochrome c, mono- and diheme variants [Energy production and conversion]; Pssm-ID: 441613 [Multi-domain] Cd Length: 169 Bit Score: 51.49 E-value: 9.64e-08
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Cytochrome_C7 | pfam14522 | Cytochrome c7 and related cytochrome c; This family includes cytochromes c7 and c7-type. In ... |
334-419 | 6.77e-06 | |||
Cytochrome c7 and related cytochrome c; This family includes cytochromes c7 and c7-type. In cytochromes c7 all three haems are bis-His co-ordinated, while in c7-type the last haem is His-Met co-ordinated. Desulfuromonas acetoxidans and Geobacter metallireducens cytochrome c7 participate in the anaerobic iron respiration, but Geobacter metallireducens cytochrome c7 hasn't a Fe(III) reductase activity. This entry also includes cytochrome c nitrite reductase subunit NrfH from Desulfovibrio vulgaris which forms a complex with cytochrome c nitrite reductase NrfA. Pssm-ID: 434012 [Multi-domain] Cd Length: 62 Bit Score: 43.43 E-value: 6.77e-06
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Name | Accession | Description | Interval | E-value | |||
Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
45-129 | 1.36e-13 | |||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 66.02 E-value: 1.36e-13
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Cytochrom_C3 | cd08168 | Heme-binding domain of the class III cytochrome C family and related proteins; This alignment ... |
250-378 | 1.58e-13 | |||
Heme-binding domain of the class III cytochrome C family and related proteins; This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm). Pssm-ID: 173979 [Multi-domain] Cd Length: 85 Bit Score: 65.72 E-value: 1.58e-13
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CccA | COG2010 | Cytochrome c, mono- and diheme variants [Energy production and conversion]; |
16-129 | 9.64e-08 | |||
Cytochrome c, mono- and diheme variants [Energy production and conversion]; Pssm-ID: 441613 [Multi-domain] Cd Length: 169 Bit Score: 51.49 E-value: 9.64e-08
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Cytochrom_C3 | cd08168 | Heme-binding domain of the class III cytochrome C family and related proteins; This alignment ... |
336-418 | 2.06e-07 | |||
Heme-binding domain of the class III cytochrome C family and related proteins; This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm). Pssm-ID: 173979 [Multi-domain] Cd Length: 85 Bit Score: 48.39 E-value: 2.06e-07
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CytC552 | COG4654 | Cytochrome c551/c552 [Energy production and conversion]; |
45-129 | 2.93e-07 | |||
Cytochrome c551/c552 [Energy production and conversion]; Pssm-ID: 443692 [Multi-domain] Cd Length: 88 Bit Score: 47.97 E-value: 2.93e-07
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Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
45-95 | 3.81e-06 | |||
Cytochrome c2 [Energy production and conversion]; Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 45.26 E-value: 3.81e-06
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Cytochrome_C7 | pfam14522 | Cytochrome c7 and related cytochrome c; This family includes cytochromes c7 and c7-type. In ... |
334-419 | 6.77e-06 | |||
Cytochrome c7 and related cytochrome c; This family includes cytochromes c7 and c7-type. In cytochromes c7 all three haems are bis-His co-ordinated, while in c7-type the last haem is His-Met co-ordinated. Desulfuromonas acetoxidans and Geobacter metallireducens cytochrome c7 participate in the anaerobic iron respiration, but Geobacter metallireducens cytochrome c7 hasn't a Fe(III) reductase activity. This entry also includes cytochrome c nitrite reductase subunit NrfH from Desulfovibrio vulgaris which forms a complex with cytochrome c nitrite reductase NrfA. Pssm-ID: 434012 [Multi-domain] Cd Length: 62 Bit Score: 43.43 E-value: 6.77e-06
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Cytochrome_CBB3 | pfam13442 | Cytochrome C oxidase, cbb3-type, subunit III; |
41-129 | 2.33e-04 | |||
Cytochrome C oxidase, cbb3-type, subunit III; Pssm-ID: 463879 [Multi-domain] Cd Length: 67 Bit Score: 39.31 E-value: 2.33e-04
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Blast search parameters | ||||
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