|
Name |
Accession |
Description |
Interval |
E-value |
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
1-588 |
0e+00 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 1336.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQP 80
Cdd:PRK08641 1 MAKGKVIVVGGGLAGLMATIKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 81 PVKAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEF 160
Cdd:PRK08641 81 PVKAMCEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGGTLHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEGWEF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 161 LGIVKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI 240
Cdd:PRK08641 161 LGAVLDDEGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 241 PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHE 320
Cdd:PRK08641 241 PGDDKLRLMSESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVEQKLGINGENMVYLDLSHKDPKE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 321 LDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGT 400
Cdd:PRK08641 321 LDIKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDYDQMTNIPGLFAAGECDYSYHGANRLGANSLLSAIYGGM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 401 VAGPNAIKYVENVETTYTELDDSIYQKRVDEEQERFDKLLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIV 480
Cdd:PRK08641 401 VAGPNAVEYIKGLGKSADDVSSSVFEQALKQEQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQ 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 481 ELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGREEAP 560
Cdd:PRK08641 481 ELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDENWLKTTMATYTPEGEEP 560
|
570 580
....*....|....*....|....*...
gi 499595356 561 KFTYEPVDVSLIPPRKRDYTSKSKGGKK 588
Cdd:PRK08641 561 EFSYEDVDTSLIPPRKRDYTSKKKGAKK 588
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
6-579 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 1002.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVP-VKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKA 84
Cdd:TIGR01811 1 VIVVGTGLAGGMAAAKLAELGYHVKLFSYVDaPRRAHSIAAQGGINGAVNTKGDGDSPWRHFDDTVKGGDFRARESPVKR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 85 MAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEFLGIV 164
Cdd:TIGR01811 81 LAVASPEIIDLMDAMGVPFAREYGGLLDTRSFGGVQVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEGWEMLDII 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 165 KDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGD- 243
Cdd:TIGR01811 161 VVDGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDg 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 244 ---DKLRLMSESARGEGgRIWTYK------------DGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENM 308
Cdd:TIGR01811 241 twqSKLRLMSESLRNDG-RIWTPKekndnrdpntipEDKRDYFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 309 VYLDLSHKDP----HELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGG 384
Cdd:TIGR01811 320 VYLDFSDADErlgrKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYDQMTNIPGLFAAGECDFSQHGA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 385 NRLGANSLLSAIYGGTVAGPNAIKYVENVETTYTELDDS--IYQKRVDEEQERFDKLLNMRGTENAYKLHRELGEIMTAN 462
Cdd:TIGR01811 400 NRLGANSLLSAIADGYFALPFTIPNYLGPELSSEDMPEDapEFQAALAEEQERFDRLLKMRGDENPYYLHRELGEIMTEN 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 463 VTVVRENDKLLETDKKIVELMKRYE-NIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFP--- 538
Cdd:TIGR01811 480 CGVSRNNEKLLKTDEKIRELRERFWkNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFPtpd 559
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 499595356 539 ---DRNDDEWLKTTLAEYQGREEAPKFTYEPVDVSLIPPRKRDY 579
Cdd:TIGR01811 560 geaERNDEEFLKVTAWEFQGENDAPEFHYEELDFELVPPRKRDY 603
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
6-579 |
5.72e-157 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 461.41 E-value: 5.72e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:TIGR01812 2 VVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPDDSWEWHAYDTVKGSDYLADQDAVEYM 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVDglvtKYEGWEFLGIVK 165
Cdd:TIGR01812 82 CQEAPKAILELEHWGVPFSRTPDGRIAQRPFGGHSKDRTCYAADKTGHALLHTLYEQCLKLGVS----FFNEYFALDLIH 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 166 DeDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGDDK 245
Cdd:TIGR01812 158 D-DGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGI 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 246 LrlMSESARGEGGRIWTyKDGKpwYFLEEKYPDYGNLVPRDIATREIFDVcINQKLGINGEN--MVYLDLSHKDPHELDV 323
Cdd:TIGR01812 237 L--ITEGCRGEGGYLVN-KNGE--RFMERYAPEKMELAPRDVVSRAMWTE-IREGRGVGSPPgdYVYLDLRHLGEEKIEE 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 324 KLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTN----IKGLFAAGECD-FSQHGGNRLGANSLLSAIYG 398
Cdd:TIGR01812 311 RLPQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVIcetiVKGLFAAGECAcVSVHGANRLGGNSLLELVVF 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 399 GTVAGPNAIKYVENvettyTELDDSIYQKRVDEEQERFDKLLNMR-GTENAYKLHRELGEIMTANVTVVRENDKLLETDK 477
Cdd:TIGR01812 391 GRIAGEAAAEYAAK-----TGNPAADIEEEAVKAEEALIDLLVESnGGERVAKIREELGDTMDDNVGIFRTEELLKKAVD 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 478 KIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGrE 557
Cdd:TIGR01812 466 EIEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDN-P 544
|
570 580
....*....|....*....|..
gi 499595356 558 EAPKFTYEPVDVSLIPPRKRDY 579
Cdd:TIGR01812 545 GTPRLEYKPVTITKYEPAERKY 566
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
5-579 |
1.26e-154 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 458.13 E-value: 1.26e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 5 KIIVVGGGLAGLMSTIKAAEQGAHVDLFSI--VPvKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPV 82
Cdd:PRK07573 37 DVIVVGTGLAGASAAATLGELGYNVKVFCYqdSP-RRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRAREANV 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEAAPSIIhllDRM---GVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLY----ALDEQVRSfevdGLVTKY 155
Cdd:PRK07573 116 YRLAEVSVNII---DQCvaqGVPFAREYGGLLANRSFGGAQVSRTFYARGQTGQQLLLgayqALSRQIAA----GTVKMY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 156 EGWEFLGIVKdEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQI 235
Cdd:PRK07573 189 TRTEMLDLVV-VDGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATAIWRAHKKGAYFANPCFTQI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 236 HPTAIP--GD--DKLRLMSESARGEGgRIWTYK----DGKPW--------YFLEEKYPDYGNLVPRDIATREIFDVCiNQ 299
Cdd:PRK07573 268 HPTCIPvsGDyqSKLTLMSESLRNDG-RIWVPKkkgdKRKPNdipeeerdYYLERRYPAFGNLVPRDVASRAAKERC-DA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 300 KLGIN-GENMVYLDLSH------KDphELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLF 372
Cdd:PRK07573 346 GRGVGpTGLGVYLDFADaikrlgKD--VIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMSTIPGLF 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 373 AAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAI-KYV-ENVETTYTELDDSIYQKRVDEEQERFDKLLNMRGTENAYK 450
Cdd:PRK07573 424 VIGEANFSDHGANRLGASALMQGLADGYFVLPYTIgNYLaDTIGTPKVSTDHPEFKEAEAEVQDRIDRLLNIKGKRTVDS 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 451 LHRELGEIMTANVTVVRENDKLLETDKKIVELMKR-YENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESR 529
Cdd:PRK07573 504 FHRELGKIMWDYCGMARNEEGLKKALEKIRALREEfWKNVRVPGSADELNQELEKAGRVADFLELGELMCRDALHREESC 583
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 499595356 530 GAHYKPEF--PD----RNDDEWLKTTLAEYQGREEAPKFTYEPVDVSLIPPRKRDY 579
Cdd:PRK07573 584 GGHFREEHqtEDgealRDDENFAYVAAWEYKGDGKEPVLHKEPLEFENVKLAQRSY 639
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
6-579 |
2.41e-138 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 414.07 E-value: 2.41e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQG---AHVDLFSIVPVKRSHSVCAQGGInGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPV 82
Cdd:PRK06069 8 VVIVGSGLAGLRAAVAAAERSggkLSVAVVSKTQPMRSHSVSAEGGT-AAVLYPEKGDSFDLHAYDTVKGSDFLADQDAV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVdglVTKYEGWeFLG 162
Cdd:PRK06069 87 EVFVREAPEEIRFLDHWGVPWSRRPDGRISQRPFGGMSFPRTTFAADKTGFYIMHTLYSRALRFDN---IHFYDEH-FVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 163 IVKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTA-IP 241
Cdd:PRK06069 163 SLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGlVP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 242 GDdklRLMSESARGEGGRIWTyKDGKpwYFLEEKYPDYGNLVPRDIATREIFDVCINQK--LGINGENMVYLDLSHKDPH 319
Cdd:PRK06069 243 SG---ILITEAARGEGGYLIN-KEGE--RFMKRYAPQKMELAPRDVVSRAIMTEIMEGRgfKHESGLCYVGLDLRHLGEE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 320 ELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMT------NIKGLFAAGEC-DFSQHGGNRLGANSL 392
Cdd:PRK06069 317 KINERLPLIREIAKKYAGIDPVTEPIPVRPAAHYTMGGIHTDVYGRVltadgeWVRGLWAAGEAaAVSVHGANRLGSNST 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 393 LSAIYGGTVAGPNAIKYVenVETTYTELDDSIYQKRvdEEQERFDKLLNMRGTENAYKLHRELGEIMTANVTVVRENDKL 472
Cdd:PRK06069 397 AECLVWGRIAGEQAAEYA--LKRPAPSSPVEKLAEK--EEKRIFDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGL 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 473 LETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAE 552
Cdd:PRK06069 473 AEALKKIKKLRERYKNVRIEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLAY 552
|
570 580
....*....|....*....|....*..
gi 499595356 553 YQGreEAPKFTYEPVDVSLIPPRKRDY 579
Cdd:PRK06069 553 YTG--GGPKVTYTPVTITKWKPEERKY 577
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
6-412 |
8.67e-124 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 371.86 E-value: 8.67e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGA---VNTKGEGDSPWIHFDDTVYGGDFLANQPPV 82
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAgtnVQKAAGEDSPEEHFYDTVKGGDGLADQDLV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFrrFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEvdglVTKYEGWEFLG 162
Cdd:COG1053 86 EALAEEAPEAIDWLEAQGVPFSRTPDGRLPQ--FGGHSVGRTCYAGDGTGHALLATLYQAALRLG----VEIFTETEVLD 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 163 IVKDeDNAARGIVAQNmTTSEIKSFGSDAVIMATGGPGIIFG------------KTTNSMINTGSAASIVYQQGAKYANG 230
Cdd:COG1053 160 LIVD-DGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYEmraeylpeaegaLSTNAPGNTGDGIAMALRAGAALADM 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 231 EFIQIHPTAIPGDdkLRLMSESARGEGGRIWTYKDGKpwYFLEEkypdygnLVPRDIATREIFDVCinqklgiNGENMVY 310
Cdd:COG1053 238 EFVQFHPTGLPGD--GGLISEGARGKPGGILVNKEGE--RFMNE-------YAPRDVVSRAILEEI-------DEPAYLV 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 311 LDLSHKDPHELDVKLG---------------GI--------IEIYEKF--TGDDPRKV-----------PMKIFPAVHYS 354
Cdd:COG1053 300 LDLRHRRRLEEYLEAGylvkadtieelaaklGIdaaelaatVARYNAAakAGVDPRGTclgpikegpfyAIPVRPGVHYT 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499595356 355 MGGLYVDYD------QMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVEN 412
Cdd:COG1053 380 MGGLRVDADarvldaDGTPIPGLYAAGEAAGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAKA 443
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
6-579 |
1.67e-115 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 355.48 E-value: 1.67e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVD--LFSIVPVKRSHSVCAQGGingAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVK 83
Cdd:PRK09231 7 LAIIGAGGAGLRAAIAAAEANPNLKiaLISKVYPMRSHTVAAEGG---SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 84 AMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYAL-------------DEQvrsFEVDG 150
Cdd:PRK09231 84 YFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLfqtslkypqiqrfDEH---FVLDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 151 LVtkyegweflgivkdEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANG 230
Cdd:PRK09231 161 LV--------------DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDM 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 231 EFIQIHPTAIPGDDKLrlMSESARGEGGrIWTYKDG------------KPWYFLEEKYPDYGnlvPRDIATREIFDvciN 298
Cdd:PRK09231 227 EFVQYHPTGLPGSGIL--MTEGCRGEGG-ILVNKDGyrylqdyglgpeTPLGEPKNKYMELG---PRDKVSQAFWH---E 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 299 QKLG--INGE--NMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAA 374
Cdd:PRK09231 298 WRKGntISTPrgDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAV 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 375 GEC-DFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENVettyTELDDSIYQKRVDEEQERFDKLLNMRGTENAYKLHR 453
Cdd:PRK09231 378 GECsSVGLHGANRLGSNSLAELVVFGRVAGEQAAERAATA----GPGNEAALDAQAADVEQRLKALVNQEGGENWAKIRD 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 454 ELGEIMTANVTVVRENDKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHY 533
Cdd:PRK09231 454 EMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQ 533
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 499595356 534 K--PEFPDRNDDEWLKTTLAEYQGrEEAPKFTYEPVDVSLIPPRKRDY 579
Cdd:PRK09231 534 RldEGCTERDDVNFLKHTLAFYNA-DGTPRIEYSDVKITKSPPAKRVY 580
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
7-579 |
1.96e-114 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 355.05 E-value: 1.96e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAV-NT-KGEGDSPWIHFDDTVYGGDFLANQPPVKA 84
Cdd:PRK08626 9 LVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRSHSAAAQGGMQASLgNAvKGEGDNEDVHFADTVKGSDWGCDQEVARM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 85 MAEAAPSIIHLLDRMGVMFSRT---------------------KEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQV 143
Cdd:PRK08626 89 FVHTAPKAVRELAAWGVPWTRVtagprtvvingekvtitekeeAHGLINARDFGGTKKWRTCYTADGTGHTMLYAVDNEA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 144 RSFEVDglvtKYEGWEFLGIVKDeDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQ 223
Cdd:PRK08626 169 IKLGVP----VHDRKEAIALIHD-GKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALET 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 224 G-AKYANGEFIQIHPTAIPGDDKlrLMSESARGEGGriwTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDvCINQKLG 302
Cdd:PRK08626 244 GvAPLGNMEAVQFHPTAIVPSGI--LVTEGCRGDGG---LLRDKDGYRFMPDYEPEKKELASRDVVSRRMTE-HIRKGKG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 303 IN---GENmVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYD-QMTNIKGLFAAGE-- 376
Cdd:PRK08626 318 VKspyGPH-LWLDIRILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTgESYGLKGLFSAGEaa 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 377 CdFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENVEttyTELDDSIYQKRVDEEQERFDKLLNMRGTENAYKLHRELG 456
Cdd:PRK08626 397 C-WDMHGFNRLGGNSLAETVVAGMIVGKYVADFCLGNE---LEIDTALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQ 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 457 EIMTANVTVVRENDKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPE 536
Cdd:PRK08626 473 EIMMEKVGIFRNGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHARED 552
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 499595356 537 FPDRNDDEWLKTTLAEYQ-GREEAPKFTYEPVDVSL--IPPRKRDY 579
Cdd:PRK08626 553 YPKRNDRDWLNRTLASWPeGEALEPTLEYEPLDVMKmeLPPGFRGY 598
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
6-550 |
2.48e-110 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 340.16 E-value: 2.48e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGaHVDLFSIVPVKRSHSVCAQGGINGAVntkGEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:COG0029 7 VLVIGSGIAGLSAALKLAERG-RVTLLTKGELGESNTRWAQGGIAAVL---DPGDSPELHIADTLAAGAGLCDPEAVRVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEvdgLVTKYEGWEFLGIVK 165
Cdd:COG0029 83 VEEGPERIRELIELGVPFDRDEDGELALTREGGHSRRRILHAGDATGREIERALLEAVRAHP---NITVLENHFAVDLIT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 166 DEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTA--IPGD 243
Cdd:COG0029 160 DADGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTAlyHPGA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 244 dKLRLMSESARGEGGRIWTyKDGKPwyFLEEKYPDyGNLVPRDIATREIFDVciNQKLGINGenmVYLDLSHKDPHELDV 323
Cdd:COG0029 240 -PSFLISEAVRGEGAVLRN-ADGER--FMPDYHPR-AELAPRDVVARAIDAE--MKKTGGDC---VYLDISHLDAEFIRE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 324 KLGGIIEIYEKFtGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQ-HGGNRLGANSLLSAIYGGTVA 402
Cdd:COG0029 310 RFPTIYARCLEL-GIDITKEPIPVAPAAHYTMGGVATDLDGRTSIPGLYAVGEVACTGvHGANRLASNSLLEGLVFGRRA 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 403 GPNAIKYVENVETTYT--ELDDSIYQKR--VDEEQERfdkllnmrgtenayklhRELGEIMTANVTVVRENDKLLETDKK 478
Cdd:COG0029 389 AEDIAARLAESPLPPEipEWDESVTDPDeeVLIAHLR-----------------DELRRLMWDYVGIVRTAKGLERALRR 451
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499595356 479 IVELmkrYENIDMEDTQTWSNQAVfftrQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTL 550
Cdd:COG0029 452 LELL---REEIEEYANFRVSRDLL----ELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPAWRRHTVL 516
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-579 |
7.91e-108 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 335.32 E-value: 7.91e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGE-GDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK06452 9 VVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIPGNSDpNDNPDYMTYDTVKGGDYLVDQDAAELL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVDglvtKYEGWEFLGIVK 165
Cdd:PRK06452 89 SNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTYPRTRFVGDKTGMALLHTLFERTSGLNVD----FYNEWFSLDLVT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 166 DEdNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI-PGDd 244
Cdd:PRK06452 165 DN-KKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALyPSD- 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 245 klRLMSESARGEGGRIwtyKDGKPWYFLEEKYPDYGNLVPRDIATREIFdVCINQKLGINGeNMVYLDLSHKDPHELDVK 324
Cdd:PRK06452 243 --VLISEAARGEGGIL---KNVKGERFMTKYAPKKLDLAPRDIVSRAII-TEIREGRGFPG-GYVGLDLTHLGEEYIKER 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 325 LGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYD-QMTNIKGLFAAGECD-FSQHGGNRLGANSLLSAIYGGTVA 402
Cdd:PRK06452 316 LALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDIDgRNPDIVGLFSAGEAAcVSVHGANRLGSNSLLDTLVFGQVT 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 403 GPNAIKYVEnvetTYTELDDSIYQKRVDEEQERFDKLLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVEL 482
Cdd:PRK06452 396 GRTVVQFLK----SNPGNPTSNYEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 483 MKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWLKTTLAEYQGreEAPKF 562
Cdd:PRK06452 472 RGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIAYLRG--NTVEV 549
|
570
....*....|....*..
gi 499595356 563 TYEPVDVSLIPPRKRDY 579
Cdd:PRK06452 550 TFKPVKITRWKPEPRVY 566
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
7-579 |
4.45e-106 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 332.09 E-value: 4.45e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMA 86
Cdd:PTZ00139 33 VVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRW-HAYDTVKGSDWLGDQDAIQYMC 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 87 EAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYH--------RTAFAGATTGQQLLYALDEQVRSFEVDGLVTKYegw 158
Cdd:PTZ00139 112 REAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAMLHTLYGQSLKYDCNFFIEYF--- 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 159 eFLGIVKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPT 238
Cdd:PTZ00139 189 -ALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQFHPT 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 239 AIPGDDKLrlMSESARGEGGrIWTYKDGKPwyFLEEKYPDYGNLVPRDIATREIfDVCINQKLGINGE-NMVYLDLSHKD 317
Cdd:PTZ00139 268 GIYGAGCL--ITEGCRGEGG-ILRNSEGER--FMERYAPTAKDLASRDVVSRAM-TIEILEGRGCGPNkDHIYLDLTHLP 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 318 PHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDY----------DQMTNIKGLFAAGECD-FSQHGGNR 386
Cdd:PTZ00139 342 PETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWktqvltqrngDDDKIVPGLLAAGEAAcASVHGANR 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 387 LGANSLLSAIYGGTVAGpNAIKYVENVETTYTELDDSIYQKRVDeeqeRFDKLLNMRGTENAYKLHRELGEIMTANVTVV 466
Cdd:PTZ00139 422 LGANSLLDIVVFGRAAA-NTVMEILKPGRPQPDLPKDAGEASIA----RLDKIRHNKGDISTAQIRKRMQRTMQKHAAVF 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 467 RENDKLLETDKKIVELMKRYENIDMED-TQTWsNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEW 545
Cdd:PTZ00139 497 RIGESLQEGVEKIKEIYSDFKDVKIKDkSLVW-NTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNW 575
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 499595356 546 LKTTLAeYQGREEAPKF--TYEPV-------DVSLIPPRKRDY 579
Cdd:PTZ00139 576 MKHTLS-YIRDVKKGKVrlTYRPVittpldnEMETVPPAKRVY 617
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
1-579 |
2.68e-104 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 326.30 E-value: 2.68e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVK--RSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLAN 78
Cdd:PRK05945 1 MLEHDVVIVGGGLAGCRAALEIKRLDPSLDVAVVAKTHpiRSHSVAAQGGIAASLKNVDPEDSWEAHAFDTVKGSDYLAD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 79 QPPVKAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEvdglVTKYEGW 158
Cdd:PRK05945 81 QDAVAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHSHNRTCYAADKTGHAILHELVNNLRRYG----VTIYDEW 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 159 EFLGIVKdEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPT 238
Cdd:PRK05945 157 YVMRLIL-EDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 239 AI-PGDdklRLMSESARGEGGRIWTYKDGKpwyFLEEKYPDYGNLVPRDIATREIfDVCINQKLGIN-----GENMVYLD 312
Cdd:PRK05945 236 GLyPVG---VLISEAVRGEGAYLINSEGDR---FMADYAPSRMELAPRDITSRAI-TLEIRAGRGINpdgsaGGPFVYLD 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 313 LSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQM------TNIKGLFAAGECD-FSQHGGN 385
Cdd:PRK05945 309 LRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEPMPVRPTVHYCMGGIPVNTDGRvrrsadGLVEGFFAAGECAcVSVHGAN 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 386 RLGANSLLSAIYGGTVAGPNAIKYVENveTTYTELDDSIYqkrVDEEQERFDKLLNMRGTENAYKLHRELGEIMTANVTV 465
Cdd:PRK05945 389 RLGSNSLLECVVYGRRTGAAIAEYVQG--RKLPEVDEQRY---LKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGV 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 466 VRENDKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEW 545
Cdd:PRK05945 464 FRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNF 543
|
570 580 590
....*....|....*....|....*....|....
gi 499595356 546 LKTTLAEYqgREEAPKFTYEPVDVSLIPPRKRDY 579
Cdd:PRK05945 544 LKHTLAYY--SPAGIDIQYMPVVITMFEPQERKY 575
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
6-551 |
2.50e-92 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 294.20 E-value: 2.50e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKgegDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK06263 10 VLIIGSGGAGARAAIEAERGKNVVIVSKGLFGKSGCTVMAEGGYNAVLNPE---DSFEKHFEDTMKGGAYLNDPKLVEIL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEvdglVTKYEGWEFLGIVK 165
Cdd:PRK06263 87 VKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFNRTCYAGDRTGHEMMMGLMEYLIKER----IKILEEVMAIKLIV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 166 DEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI--PGD 243
Cdd:PRK06263 163 DENREVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvyPYS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 244 DKLRLMSESARGEGGRIWTyKDGKpwYFLEEKYPDYGNLVPRDIATREIFDVcINQKLGINgENMVYLDLSHKDPHELDV 323
Cdd:PRK06263 243 GRGILVTEAVRGEGGILYN-KNGE--RFMKRYDPERMELSTRDVVARAIYTE-IQEGRGTN-HGGVYLDVTHLPDEVIEE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 324 KLGGIIEIYEKFtGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAG 403
Cdd:PRK06263 318 KLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGIRINEDCETNIPGLFACGEVAGGVHGANRLGGNALADTQVFGAIAG 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 404 PNAIKYVENVETTYTELDDSIYQKRVDEEQERFDkllnmrGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVELM 483
Cdd:PRK06263 397 KSAAKNAENNEFKKVNRSVEEDIARIKSEIKFLN------GSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELK 470
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499595356 484 KRYENIDMEDTQTWSNQAvfftrQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNdDEWLKTTLA 551
Cdd:PRK06263 471 EKLKDLKVNGIVDFNKAL-----ELENMILVAELVIKSALLRKESRGAHYREDYPETN-DEWFGNIIL 532
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
7-579 |
2.11e-91 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 294.46 E-value: 2.11e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMA 86
Cdd:PLN00128 54 VVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRW-HMYDTVKGSDWLGDQDAIQYMC 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 87 EAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLY--------HRTAFAGATTGQQLLYALDEQVRSFEVDGLVTKYEgw 158
Cdd:PLN00128 133 REAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLdfgkggqaYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFA-- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 159 efLGIVKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPT 238
Cdd:PLN00128 211 --LDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPT 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 239 AIPGDDKLrlMSESARGEGGrIWTYKDGKpwYFLEEKYPDYGNLVPRDIATREIfDVCINQKLGINGE-NMVYLDLSHKD 317
Cdd:PLN00128 289 GIYGAGCL--ITEGSRGEGG-ILRNSEGE--RFMERYAPTAKDLASRDVVSRSM-TMEIREGRGVGPEkDHIYLHLNHLP 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 318 PHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDY----------DQMTNIKGLFAAGECD-FSQHGGNR 386
Cdd:PLN00128 363 PEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYhgevvtikgdDPDAVVPGLMAAGEAAcASVHGANR 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 387 LGANSLLSAIYGGTvAGPNAIKYVENVETTYTELDDSIYQKRVdeeqERFDKLLNMRGTENAYKLHRELGEIMTANVTVV 466
Cdd:PLN00128 443 LGANSLLDIVVFGR-ACANRVAEIAKPGEKQKPLPKDAGEKTI----AWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVF 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 467 RENDKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWL 546
Cdd:PLN00128 518 RTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWM 597
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 499595356 547 KTTLAEYQgrEEAPKFTYEPV-------DVSLIPPRKRDY 579
Cdd:PLN00128 598 KHTLGYWE--EGKVRLDYRPVhmntlddEVETFPPKARVY 635
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
6-392 |
5.05e-89 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 280.71 E-value: 5.05e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNT-KGEGDSPWIHFDDTVYGGDFLANQPPVKA 84
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNPpQGGIDSPELHPTDTLKGLDELADHPYVEA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 85 MAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYH-RTAFAGA------TTGQQLLYALDEQVRSFEVDglvtKYEG 157
Cdd:pfam00890 82 FVEAAPEAVDWLEALGVPFSRTEDGHLDLRPLGGLSATwRTPHDAAdrrrglGTGHALLARLLEGLRKAGVD----FQPR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 158 WEFLGIVKdEDNAARGIVAQNMTTSEIKSFGSD-AVIMATGGPG---------IIFGKTTNSMINTGSAASIVYQQGAKY 227
Cdd:pfam00890 158 TAADDLIV-EDGRVTGAVVENRRNGREVRIRAIaAVLLATGGFGrlaelllpaAGYADTTNPPANTGDGLALALRAGAAL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 228 ANG--EFIQIHPTAIPGD-DKLRLMSESARGEGGrIWTYKDGKPwyFLeekypdyGNLVPRDIATREIFDVCINQKLGIN 304
Cdd:pfam00890 237 TDDlmEFVQFHPTSLVGIrLGSGLLIEALRGEGG-ILVNKDGRR--FM-------NELASRDVVSRAITRNEIDEGRGAN 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 305 genmVYLDLSHK-DPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMT------NIKGLFAAGEC 377
Cdd:pfam00890 307 ----VYLDASGSlDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVldadgqPIPGLYAAGEV 382
|
410
....*....|....*.
gi 499595356 378 DFS-QHGGNRLGANSL 392
Cdd:pfam00890 383 ACGgVHGANRLGGNSL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
6-550 |
9.78e-79 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 260.74 E-value: 9.78e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK07803 11 VVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNPKDNWQVHFRDTMRGGKFLNNWRMAELH 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSF--EVDGLVTKYEGW----- 158
Cdd:PRK07803 91 AKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYPRLAHVGDRTGLELIRTLQQKIVSLqqEDHAELGDYEARikvfa 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 159 -----EFLgivKDEDNAArGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFI 233
Cdd:PRK07803 171 ectitELL---KDGGRIA-GAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFV 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 234 QIHPTAI--PGDDKLRLMSESARGEGGrIWTYKDGKPWYF-------------LEEK----YPDYGN------LVPRDIA 288
Cdd:PRK07803 247 QFHPTGMvwPPSVKGILVTEGVRGDGG-VLKNSEGKRFMFdyipdvfkgqyaeTEEEadrwYKDNDNnrrppeLLPRDEV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 289 TReifdvCINQ--KLGINGEN-MVYLDL-SHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYD- 363
Cdd:PRK07803 326 AR-----AINSevKAGRGSPHgGVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGVEVDPDt 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 364 QMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENVETTYTELDDSIyqkrVDEEQERFDKLLNMR 443
Cdd:PRK07803 401 GAATVPGLFAAGECAGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAV----DAAAREALAPFERPA 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 444 GTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIVELMKRYENIDMEDTQTWsNQAVFFTRQLWNMLVLARVITIGAY 523
Cdd:PRK07803 477 GAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVEGHRQY-NPGWHLALDLRNMLLVSECVARAAL 555
|
570 580
....*....|....*....|....*..
gi 499595356 524 NRNESRGAHYKPEFPDRnDDEWLKTTL 550
Cdd:PRK07803 556 ERTESRGGHTRDDHPGM-DPEWRRINL 581
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
6-541 |
1.27e-69 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 233.65 E-value: 1.27e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQgaHVDLFSIVPV-KRSHSVCAQGGINGAVntkGEGDSPWIHFDDTVYGGDFLANQPPVKA 84
Cdd:PRK07512 12 PVIVGGGLAGLMAALKLAPR--PVVVLSPAPLgEGASSAWAQGGIAAAL---GPDDSPALHAADTLAAGAGLCDPAVAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 85 MAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFA-GATTGQQLLYALDEQVRSfevDGLVTKYEGWEFLGI 163
Cdd:PRK07512 87 ITAEAPAAIEDLLRLGVPFDRDADGRLALGLEAAHSRRRIVHVgGDGAGAAIMRALIAAVRA---TPSITVLEGAEARRL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 164 VKDeDNAARGIVAQNMTTSEIksFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIP-G 242
Cdd:PRK07512 164 LVD-DGAVAGVLAATAGGPVV--LPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDiG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 243 DDKLRLMSESARGEGGriwTYKDGKPWYFLEEKYPDyGNLVPRDIATREIFDvcinqklgingENM----VYLD----LS 314
Cdd:PRK07512 241 RDPAPLATEALRGEGA---ILINEDGERFMADIHPG-AELAPRDVVARAVFA-----------EIAagrgAFLDaraaLG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 315 HKDPHELDVklggiieIYE--KFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFS-QHGGNRLGANS 391
Cdd:PRK07512 306 AHFATRFPT-------VYAacRSAGIDPARQPIPVAPAAHYHMGGIAVDADGRSSLPGLWAAGEVASTgLHGANRLASNS 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 392 LLSAI-YGGTVAGpnAIKYVENVETTYTELDDSIYQKRVDEEqerfdkllnmrgtenayklhrELGEIMTANVTVVREND 470
Cdd:PRK07512 379 LLEAVvFAARAAE--DIAGTPAAAAAPLSAAAAPALDPADLA---------------------LLRPIMSRHVGVLRDAD 435
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499595356 471 KLLETDKKIVELmkryenidmEDTQTwsnqavfftrQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRN 541
Cdd:PRK07512 436 GLRRAIAALLPL---------EAGAG----------PAADPATVALLIAVAALAREESRGAHFRTDFPLTA 487
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
7-551 |
2.32e-69 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 234.99 E-value: 2.32e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAhvdlFSIVPVKRSHSVC---AQGGINGAVNTKgegDSPWIHFDDTVYGGDFLANQPPVK 83
Cdd:PLN02815 33 LVIGSGIAGLRYALEVAEYGT----VAIITKDEPHESNtnyAQGGVSAVLDPS---DSVESHMRDTIVAGAFLCDEETVR 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 84 AMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSfevDGLVTKYEGWEFLGI 163
Cdd:PLN02815 106 VVCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVKN---DPNITFFEHHFAIDL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 164 VKDEDNAAR---GIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI 240
Cdd:PLN02815 183 LTSQDGGSIvchGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTAL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 241 PGD------DKLR----LMSESARGEGGRIWTykdgKPWYFLEEKYPDYGNLVPRDIATREIFDvcinqKLGINGENMVY 310
Cdd:PLN02815 263 ADEglpikpAKARenafLITEAVRGDGGILYN----LAGERFMPLYDERAELAPRDVVARSIDD-----QLKKRNEKYVL 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 311 LDLSHKDPHELDVKLGGII-EIYEKftGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQ-HGGNRLG 388
Cdd:PLN02815 334 LDISHKPREEILSHFPNIAaECLKR--GLDITKQPIPVVPAAHYMCGGVRTGLQGETNVQGLYAAGEVACTGlHGANRLA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 389 ANSLLSAIyggtVAGPNAIK-YVENVETTYTELDDSIYQKRVDEEQERFDKLLNmRGTENAYKLHRELGEIMTANVTVVR 467
Cdd:PLN02815 412 SNSLLEAL----VFARRAVQpSIDHMARALRDVSAAAAWARPVAPTALADSVMD-EILEWTAVVRKELQRIMWNYVGIVR 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 468 ENDKLLETDKKIVELMKRYENIDMedTQTWSNQAVFF-TRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRNDDEWL 546
Cdd:PLN02815 487 STERLETAERKLEELEAEWEAILF--RHGWKPTMVGLeACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVESERK 564
|
....*
gi 499595356 547 KTTLA 551
Cdd:PLN02815 565 PTVIF 569
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
1-541 |
1.71e-64 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 219.86 E-value: 1.71e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 1 MAEKKIIVVGGGLAGLmSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTkgeGDSPWIHFDDTVYGGDFLANQP 80
Cdd:PRK08071 1 MPSADVIIIGSGIAAL-TVAKELCHEYNVIIITKKTKRNSNSHLAQGGIAAAVAT---YDSPNDHFEDTLVAGCHHNNER 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 81 PVKAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGA-TTGQQLLYALDEQVRSFevdglVTKYEGWE 159
Cdd:PRK08071 77 AVRYLVEEGPKEIQELIENGMPFDGDETGPLHLGKEGAHRKRRILHAGGdATGKNLLEHLLQELVPH-----VTVVEQEM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 160 FLGIVKdEDNAARGIVAQNmTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTA 239
Cdd:PRK08071 152 VIDLII-ENGRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTM 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 240 IPGDDK-LRLMSESARGEGGRIWTyKDGKPwyFLEEKYPDyGNLVPRDIATREIFDvcinqklGINGENMVYLDLShKDP 318
Cdd:PRK08071 230 LYANGRcVGLVSEAVRGEGAVLIN-EDGRR--FMMGIHPL-ADLAPRDVVARAIHE-------ELLSGEKVYLNIS-SIQ 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 319 HeLDVKLGGIIEIYEKFtGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGE--CDfSQHGGNRLGANSLLSAI 396
Cdd:PRK08071 298 N-FEERFPTISALCEKN-GVDIETKRIPVVPGAHFLMGGVKTNLDGETSIPGLYAIGEvaCT-GVHGANRLASNSLLEGL 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 397 YGGTVAGpnaikyvenvettyteldDSIYQKRVDEEQERFDKLLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETD 476
Cdd:PRK08071 375 VFGKRAA------------------EHILTKATKPRLNPFAEKEKKFIVLNHLPTKEEIQEKMMKYVGIVRTEQSLSEAK 436
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499595356 477 KKIVELMKRYENIDMEDTqtwSNQavffTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPDRN 541
Cdd:PRK08071 437 RWLEKYGVRNMILDHDAL---TNE----EIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHRN 494
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
6-552 |
3.19e-62 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 214.91 E-value: 3.19e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQgAHVDLFSIVPVKRSHSVCAQGGINGAVNtkgEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK07395 12 VLVVGSGAAGLYAALCLPSH-LRVGLITKDTLKTSASDWAQGGIAAAIA---PDDSPKLHYEDTLKAGAGLCDPEAVRFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLldfrrfGGTL-----YHRTAFAGATTGQQLLYALDEQVR---SFEV--DGLVTKY 155
Cdd:PRK07395 88 VEQAPEAIASLVEMGVAFDRHGQHL------ALTLeaahsRPRVLHAADTTGRAIVTTLTEQVLqrpNIEIisQALALSL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 156 egWeflgiVKDEDNAARGI--VAQNmttsEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFI 233
Cdd:PRK07395 162 --W-----LEPETGRCQGIslLYQG----QITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 234 QIHPTA--IPGDDKLrLMSESARGEGGRIwtyKDGKPWYFLEEKYPDyGNLVPRDIATREIFDVCinQKLGINGENM-VY 310
Cdd:PRK07395 231 QFHPTAltKPGAPRF-LISEAVRGEGAHL---VDAQGRRFAFDYHPA-GELAPRDVVSRAIFSHL--QKTATDPATAhVW 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 311 LDLSHKDPHELDVKLGGIIEIYEKFtGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQ-HGGNRLGA 389
Cdd:PRK07395 304 LDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQTSIPGLYAVGETASTGvHGANRLAS 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 390 NSLLSAI-YGGTVAGpnaIKYVENVETTYTELDDSIYQKRVDEEQErfdkllnmrgTENAYKLHRELGEIMTANVTVVRE 468
Cdd:PRK07395 383 NSLLECLvFAAQLAQ---LELPIEPPASPDLPPISFIIDASQWKNE----------QEQIQRIRQELPELVWQSAGICRE 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 469 NDKLLE---------TDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLW----NMLVLARVITIGAYNRNESRGAHYKP 535
Cdd:PRK07395 450 ADTLERaiaqveqwqQQLAALPLSQFLANLPPGQTVSFNGPDAEQQLRLWaetrNLLDIAYLILKSALFRTESRGGHYRL 529
|
570
....*....|....*..
gi 499595356 536 EFPDrNDDEWLKTTLAE 552
Cdd:PRK07395 530 DYPQ-TDPAWQVHTLVQ 545
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
6-546 |
1.18e-56 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 199.43 E-value: 1.18e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVntkGEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK07804 19 VVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVL---DPGDSPEAHVADTLVAGAGLCDPDAVRSL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFGGTLYHRTAFAGA-TTGQQLLYALDEQVRSFEVDGLvtkyEGWEFLGIV 164
Cdd:PRK07804 96 VAEGPRAVRELVALGARFDESPDGRWALTREGGHSRRRIVHAGGdATGAEVQRALDAAVRADPLDIR----EHALALDLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 165 KDEDNAARGIVAQNMTTSEIKSFG---SDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI- 240
Cdd:PRK07804 172 TDGTGAVAGVTLHVLGEGSPDGVGavhAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLf 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 241 -PGDDKLR--LMSESARGEGGRIwtyKDGKPWYFLEEKYPdYGNLVPRDIATREIfdvciNQKLGINGENMVYLDLSHKD 317
Cdd:PRK07804 252 lGPAAGGQrpLISEAVRGEGAIL---VDAQGNRFMAGVHP-LADLAPRDVVAKAI-----DRRMKATGDDHVYLDARGIE 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 318 phELDVKLGGIIEIYEKFtGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGE--CDfSQHGGNRLGANSLLSA 395
Cdd:PRK07804 323 --GFARRFPTITASCRAA-GIDPVRQPIPVAPAAHYSCGGVVTDVYGRTSVPGLYAAGEvaCT-GVHGANRLASNSLLEG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 396 IYGGTVAGPNAIKYVENVETTYTELDDSIYQKRVDEEqERfdkllnmrgtenayklhRELGEIMTANVTVVRENDKLLET 475
Cdd:PRK07804 399 LVVGERAGAAAAAHAAAAGRPRATPAVGPEPGLLPAL-DR-----------------AELQRAMTRGAGVLRSAAGLARA 460
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499595356 476 DKkivELMKRYENIDMEDTQTWsnQAVfftrqlwNMLVLARVITIGAYNRNESRGAHYKPEFPDRnDDEWL 546
Cdd:PRK07804 461 AD---RLAAGAPARVVPGRADW--EDT-------NLTLVARALVAAALARTESRGCHWREDFPDT-DDEWA 518
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
452-579 |
3.32e-52 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 174.94 E-value: 3.32e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 452 HRELGEIMTANVTVVRENDKLLETDKKIVELMKRYENIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGA 531
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 499595356 532 HYKPEFPDRNDDEWLKTTLAEYQGREEAPKFTYEPVDVS-LIPPRKRDY 579
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDGGPRLEYEPVTFTtLFPPKERSY 129
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
6-543 |
5.62e-51 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 183.96 E-value: 5.62e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQgAHVDLFSIVPVKRSHSVCAQGGInGAVntKGEGDSPWIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK09077 11 VLIIGSGAAGLSLALRLAEH-RRVAVLSKGPLSEGSTFYAQGGI-AAV--LDETDSIESHVEDTLIAGAGLCDEDAVRFI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLLDFR----RFGGTLYHRTAFAGATTGQQLLYALDEQVRS------FE----VDgL 151
Cdd:PRK09077 87 AENAREAVQWLIDQGVPFTTDEQANGEEGyhltREGGHSHRRILHAADATGKAVQTTLVERARNhpnitvLErhnaID-L 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 152 VTKyegwEFLGIvkdEDNAARGIVAQNMTTSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGE 231
Cdd:PRK09077 166 ITS----DKLGL---PGRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANME 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 232 FIQIHPTAI--PgDDKLRLMSESARGEGGRIwTYKDGKPwyFLeekyPDY---GNLVPRDIATREI-FDVcinQKLGIng 305
Cdd:PRK09077 239 FNQFHPTCLyhP-QARSFLITEALRGEGAYL-KLPDGTR--FM----PDFderAELAPRDIVARAIdHEM---KRLGA-- 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 306 eNMVYLDLSHKdPHELdvklggIIE----IYEKFT--GDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDF 379
Cdd:PRK09077 306 -DCVYLDISHK-PADF------IRQhfptIYERCLelGIDITKEPIPVVPAAHYTCGGVMVDLHGRTDLDGLYAIGEVSY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 380 SQ-HGGNRLGANSLLSAIYGGTVAGPNAIKYVENVETTYT--ELDDSiyqkRV---DEE---QERFDkllnmrgtenayk 450
Cdd:PRK09077 378 TGlHGANRMASNSLLECLVYGRSAAEDILSRLPKAPMPPTlpAWDES----RVtdsDEEvviQHNWH------------- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 451 lhrELGEIMTANVTVVReNDKLLETDKKIVELMKRyenidmEDTQTWSNQAVffTR---QLWNMLVLARVITIGAYNRNE 527
Cdd:PRK09077 441 ---ELRLFMWDYVGIVR-TTKRLERALHRIRLLQQ------EIDEYYANFRV--SNnllELRNLVQVAELIVRCAMERKE 508
|
570
....*....|....*.
gi 499595356 528 SRGAHYKPEFPDRNDD 543
Cdd:PRK09077 509 SRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
6-444 |
9.66e-49 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 175.26 E-value: 9.66e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQgAHVDLFSIVPVKRSHSVCAQGGINGAVNTKgegDSPwIHFDDTVYGGDFLANQPPVKAM 85
Cdd:PRK06175 7 VLIVGSGVAGLYSALNLRKD-LKILMVSKGKLNECNTYLAQGGISVARNKD---DIT-SFVEDTLKAGQYENNLEAVKIL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 86 AEAAPSIIHLLDRMGVMFSRTKEGLlDFRRFGGTLYHRTAFAGATTGQQLLYALDEQVRSFEVdglVTKYEGWEFLGIVK 165
Cdd:PRK06175 82 ANESIENINKLIDMGLNFDKDEKEL-SYTKEGAHSVNRIVHFKDNTGKKVEKILLKKVKKRKN---ITIIENCYLVDIIE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 166 DEDNAARGIVAQNmttSEIKSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIPGD-- 243
Cdd:PRK06175 158 NDNTCIGAICLKD---NKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEEti 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 244 -DKLRLMSESARGEGGRIWTYKDGKpwyFLEEkypdygnLVPRDIATREIFdvcinQKLGINGENMVYLDLSHKDPHELD 322
Cdd:PRK06175 235 eGKKFLISESVRGEGGKLLNSKGER---FVDE-------LLPRDVVTKAIL-----EEMKKTGSNYVYLDITFLDKDFLK 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 323 VKLGGiieIYEKF--TGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQ-HGGNRLGANSLLSAIYGG 399
Cdd:PRK06175 300 NRFPT---IYEEClkRGIDITKDAIPVSPAQHYFMGGIKVDLNSKTSMKNLYAFGEVSCTGvHGANRLASNSLLEGLVFS 376
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 499595356 400 TVAGPNAIKYVENVETTYTE---LDDSIYQKRVDEEQERFDKLLNMRG 444
Cdd:PRK06175 377 KRGAEKINSEIDNIKLNITKvytLKHDVEYYSLLNKKIIIKEIEKLRG 424
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
3-538 |
1.43e-47 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 173.06 E-value: 1.43e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 3 EKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPvKRSHSVCAQGGINGAVNtkgEGDSPWIHFDDTVYGGDFLANQPPV 82
Cdd:PRK08401 1 MMKVGIVGGGLAGLTAAISLAKKGFDVTIIGPGI-KKSNSYLAQAGIAFPIL---EGDSIRAHVLDTIRAGKYINDEEVV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEAAPSIIHLLDRMGVMF-SRTKEGlldfrrfgGTLYHRTAFAGATTGQQLLYALDEQVRSFEVDglvtkyegweFL 161
Cdd:PRK08401 77 WNVISKSSEAYDFLTSLGLEFeGNELEG--------GHSFPRVFTIKNETGKHIIKILYKHARELGVN----------FI 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 162 GIVKDEDNAARGIVAQNMTTSEIKSFgsDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAIP 241
Cdd:PRK08401 139 RGFAEELAIKNGKAYGVFLDGELLKF--DATVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFI 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 242 GDDKLRLMSESARGEGGRIWTyKDGKpwYFLEEkypdygnLVPRDIATREIFDVCINQKlgingenMVYLDLShkdphel 321
Cdd:PRK08401 217 GKRGTYLISEAVRGAGAKLVT-GDGE--RFVNE-------LETRDIVARAIYRKMQEGK-------GVFLDAT------- 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 322 dvklgGIIEIYEKF---------TGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGEC-DFSQHGGNRLGANS 391
Cdd:PRK08401 273 -----GIEDFKRRFpqiyaflrkEGIDPSRDLIPVTPIAHYTIGGISVDTFYRTGIKNLYAIGEAaSNGFHGANRLASNS 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 392 LLSAIYGGtvagpnaikyvenVETTYTELDDSIYQKRVDEEQERFDKLLNMrgtenayklhRELGEIMTANVTVVRENDK 471
Cdd:PRK08401 348 LLECIVSG-------------LEVARTISRERPKLREVKEPPYHGYELGDV----------DSIREILWNHAGIVRSEES 404
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499595356 472 LLETDKKIvelmkryENIDMEDtqtwsnqavfftrqlwNMLVLARVITIGAYNRNESRGAHYKPEFP 538
Cdd:PRK08401 405 LREGLKKL-------EGIEADP----------------RLKLLAKGVLECALAREESRGAHYREDFP 448
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
6-403 |
2.00e-33 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 132.85 E-value: 2.00e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQG-AHVDLFSIVPVKRSHSVCAQGGINGAVN----TKGEGDSPWIHFDDTVYGGDFLANQP 80
Cdd:TIGR01813 2 VVVVGSGFAGLSAALSAKKAGaANVVLLEKMPVIGGNSAIAAGGMNAAGTdqqkALGIEDSPELFIKDTLKGGRGINDPE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 81 PVKAMAEAAPSIIHLLdRMGVMFSRTkegllDFRRFGG---TLYHRTAfAGATTGQQLLYALDEQVRSFEVDGLVTKYeg 157
Cdd:TIGR01813 82 LVRILAEESKDAVDWL-QDGVGARLD-----DLIQLGGhsvPRAHRPT-GGAASGAEIVQTLYKKAKKEGIDTRLNSK-- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 158 weFLGIVKDEDNAARGIVAQNMTTSeIKSFGSDAVIMATGG------------PGIIFGKTTNSMINTGSAASIVYQQGA 225
Cdd:TIGR01813 153 --VEDLIQDDQGSVVGVVVKGKGKG-IYIKAAKAVVLATGGfgsnkemiakydPTLKHLGSTNQPGATGDGLLMAEKIGA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 226 KYANGEFIQIHPTAIPGDDKLrLMSESARGEGGrIWTYKDGKpwYFLEEkypdygnLVPRDIATREI-----------FD 294
Cdd:TIGR01813 230 ALVDMDYIQAHPTASPDEGGF-LISEAVRGYGA-ILVNKTGE--RFMNE-------LATRDKVSDAIlaqpgkdayliFD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 295 VCINQKLGINgENMVYLDLSHK-DPHELDVKLGGI--------IEIYEKF--TGDDP---RKVPM------------KIF 348
Cdd:TIGR01813 299 DDVYKKAKMV-DNYYRLGVAYKgDSLEELAKQFGIpaaalkqtIKDYNGYvaSGKDTpfgRPMDMptdlskapyyaiKVT 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499595356 349 PAVHYSMGGLYVD------YDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAG 403
Cdd:TIGR01813 378 PGVHHTMGGVKINtkaevlDANGKPIPGLFAAGEVTGGVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
6-411 |
1.79e-24 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 107.23 E-value: 1.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINgAVNTK-----GEGDSPWIHFDDTVYGGDFLANQP 80
Cdd:PRK06481 64 IVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMN-ASETKfqkaqGIADSNDKFYEETLKGGGGTNDKA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 81 PVKAMAEAAPSIIHLLDRMGVMFSR-TKEGLLDFRRfggtlYHRTAfAGATTGQQLLYALDEQVRSFE----VDGLVTKy 155
Cdd:PRK06481 143 LLRYFVDNSASAIDWLDSMGIKLDNlTITGGMSEKR-----THRPH-DGSAVGGYLVDGLLKNVQERKiplfVNADVTK- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 156 egweflgiVKDEDNAARGIVAQnMTTSEIKSFGSDAVIMATGG------------PGIIFGKTTNSMINTGSAASIVYQQ 223
Cdd:PRK06481 216 --------ITEKDGKVTGVKVK-INGKETKTISSKAVVVTTGGfgankdmiakyrPDLKGYVTTNQEGSTGDGIKMIEKL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 224 GAKYANGEFIQIHPTAipGDDKLRLMSESARGEGGrIWTYKDGKPWY----------FLEEKYPDYGNLVPRDIATRE-- 291
Cdd:PRK06481 287 GGTTVDMDQIQIHPTV--QQSKSYLIGEAVRGEGA-ILVNQKGKRFGneldtrdkvsAAINKLPEKYAYVVFDSGVKDrv 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 292 -IFDVCINQKLGINGENMVYLDLSHKDPHEldvKLGGIIEIYEKFTGD--------------DPRKVP---MKIFPAVHY 353
Cdd:PRK06481 364 kAIAQYEEKGFVEEGKTIDELAKKINVPAE---TLTKTLDTWNKAVKNkkdeafgrttgmdnDLSTGPyyaIKIAPGIHY 440
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499595356 354 SMGGLYV-------DYDQmTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVE 411
Cdd:PRK06481 441 TMGGVKIntntevlKKDG-SPITGLYAAGEVTGGLHGENRIGGNSVADIIIFGRQAGTQSAEFAK 504
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
6-545 |
4.35e-24 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 106.29 E-value: 4.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQ--GAHVDLFSIVPVKRSHSVC-AQGGINGAVnTKGEGDsPWIHFDDTVYGGDFLANQPPV 82
Cdd:PRK08275 12 ILVIGGGTAGPMAAIKAKERnpALRVLLLEKANVKRSGAISmGMDGLNNAV-IPGHAT-PEQYTKEITIANDGIVDQKAV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRfggtLYHRTAF-AGATTGQQLLYALDEQVRSFEVdGLVTKYEGWEFL 161
Cdd:PRK08275 90 YAYAEHSFETIQQLDRWGVKFEKDETGDYAVKK----VHHMGSYvLPMPEGHDIKKVLYRQLKRARV-LITNRIMATRLL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 162 givKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATGG--------PGIIFGKTTNSMiNTGSAASIVYQQGAKYANGEFI 233
Cdd:PRK08275 165 ---TDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAagrlglpaSGYLFGTYENPT-NAGDGYAMAYHAGAELANLECF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 234 QIHP----------TAIPGddklRLMSESARGEGGRiwtykdgkpwyFLEEKYPDyGNLVprdiatREIFdvcinQKLGi 303
Cdd:PRK08275 241 QINPlikdyngpacAYVTG----PLGGYTANAKGER-----------FIECDYWS-GQMM------WEFY-----QELQ- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 304 NGENMVYLDLSHKDPhELDVKLGGIIEIYEKFT--------GDDPRK--VPMKI----FPAVHySMGGLYVDYDQMTNIK 369
Cdd:PRK08275 293 SGNGPVFLKLDHLAE-ETIQTIETILHTNERPSrgrfhegrGTDYRQqmVEMHIseigFCSGH-SASGVWVNEKAETTVP 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 370 GLFAAGECDFSQHggnrlgaNSLLSAIYGGTVAGPNAIKYVENVEttYTELDDSiyqkRVDEEQER-FDKLLNMRG---T 445
Cdd:PRK08275 371 GLYAAGDMASVPH-------NYMLGAFTYGWFAGENAAEYVAGRD--LPEVDAA----QVEAERARvLAPLHREDGlppA 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 446 ENAYKLHRELG------------EIMTANVTVVREN-DKLLETDKKivELMKRYENIDMEDTQTWSNQAVFFtrqlwnml 512
Cdd:PRK08275 438 QVEYKLRRLVNdylqppkvtrkmEIGLQRFAEIREDlERIKARDPH--ELMRALEVSSIRDCAEMAARASLF-------- 507
|
570 580 590
....*....|....*....|....*....|....*
gi 499595356 513 vlarvitigaynRNESRGA--HYKPEFPDRNDDEW 545
Cdd:PRK08275 508 ------------RTESRWGlyHYRVDFPERNDAEW 530
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
5-406 |
5.74e-16 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 81.75 E-value: 5.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 5 KIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAvNTKGEGDspwihfDDTVYGGDFL-------- 76
Cdd:PTZ00306 411 RVIVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGGNSAKATSGINGW-GTRAQAK------QDVLDGGKFFerdthlsg 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 77 --ANQPP--VKAMAEAAPSIIHLLDRMGVmfsrtkeGLLDFRRFGGTLYHRTAFAGATT-------GQQLLYALDEQVRS 145
Cdd:PTZ00306 484 kgGHCDPglVKTLSVKSADAISWLSSLGV-------PLTVLSQLGGASRKRCHRAPDKKdgtpvpiGFTIMRTLEDHIRT 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 146 fEVDGLVTKYEGWEFLGIVKDEDNAARGIVAQNMTTSEIKSFG----------SDAVIMATGG---------------PG 200
Cdd:PTZ00306 557 -KLSGRVTIMTETTVTSLLSESSARPDGVREIRVTGVRYKQASdasgqvmdllADAVILATGGfsndhtpnsllreyaPQ 635
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 201 IIFGKTTNSMINTGSAASIVYQQGAKYANGEFIQIHPTAI--PGDDKLR---LMSESARGEGGrIWTYKDGKpwYFLEE- 274
Cdd:PTZ00306 636 LSGFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLidPKDPSNRtkyLGPEALRGSGG-VLLNKNGE--RFVNEl 712
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 275 ---------------KYPDYGNlvprdiatrEIFDVCI----NQKL-GINGENMVY--LDLSHK-DPHELDVKLGG---- 327
Cdd:PTZ00306 713 dlrsvvsqaiiaqgnEYPGSGG---------SKFAYCVlneaAAKLfGKNSLGFYWkrLGLFQRvDDVKGLAKLIGcpve 783
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 328 ----IIEIYEK---------FTG----------DDPRKVPMkIFPAVHYSMGGLYVD--------------YDQMTNIKG 370
Cdd:PTZ00306 784 nlhrTLETYERlstkkvacpLTGkvvfpcvvgtQGPYYVAF-VTPSIHYTMGGCLISpsaemqmednsvniFEDRRPILG 862
|
490 500 510
....*....|....*....|....*....|....*.
gi 499595356 371 LFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNA 406
Cdd:PTZ00306 863 LFGAGEVTGGVHGGNRLGGNSLLECVVFGKIAGDRA 898
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
6-414 |
7.65e-11 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 65.26 E-value: 7.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVcAQG--GINGAVnTKGEGdSPWIHFDDTVYGGDFLANQPPVK 83
Cdd:PRK13800 16 VLVIGGGTAGTMAALTAAEHGANVLLLEKAHVRHSGAL-AMGmdGVNNAV-IPGKA-EPEDYVAEITRANDGIVNQRTVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 84 AMAEAAPSIIHLLDRMGVMFSRTKEGLLDFRRFggtlyHRTA--FAGATTGQQLLYALDEQVRSFEVDGLVtKYEGWEFL 161
Cdd:PRK13800 93 QTATRGFAMVQRLERYGVKFEKDEHGEYAVRRV-----HRSGsyVLPMPEGKDVKKALYRVLRQRSMRERI-RIENRLMP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 162 GIVKDEDNAARGIVAQNMTTSEIKSFGSDAVIMATG--------GPGIIFGKTTNSMiNTGSAASIVYQQGAKYANGEFI 233
Cdd:PRK13800 167 VRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGpcgrlglpASGYLYGTYENPT-NAGDGYSMAYHAGAELSGIECF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 234 QIHP------------TAIP-GDDKLrlmseSARGEggriwTYKDGKPW--YFLEEkypdygnlVPRDIATreifdvcin 298
Cdd:PRK13800 246 QINPlikdyngpacayVANPfGGYQV-----NAQGE-----RFVDSDYWsgQMMAE--------VKREIES--------- 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 299 qklginGENMVYLDLSHKDPHELDVkLGGIIEIYEKFT--------GDDPRK--VPMKIFP---AVHYSMGGLYVDYDQM 365
Cdd:PRK13800 299 ------ARGPIYLKVSHLPEETLSA-LESILHTTERPTrgtfhanrGHDYRThdIEMHISEiglCSGHSASGVWVDEHAR 371
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 499595356 366 TNIKGLFAAGECDFSQHggnrlgaNSLLSAIYGGTVAGPNAIKYVENVE 414
Cdd:PRK13800 372 TTVPGLYAAGDLACVPH-------NYMIGAFVFGDLAGAHAAGTLAEVP 413
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
6-574 |
5.28e-10 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 62.25 E-value: 5.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 6 IIVVGGGLAGLMSTIKAAE--QGAHVDLFSIVPVKRSHSVcAQGgINgAVNTK-GEGDSPwihfDDTVyggDFLANQPP- 81
Cdd:PRK06854 14 ILIIGGGMAGCGAAFEAKEwaPDLKVLIVEKANIKRSGAV-AQG-LS-AINAYiGEGETP----EDYV---RYVRKDLMg 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 82 ------VKAMAEAAPSIIHLLDRMGVMFSRTKEGllDFRRFG-------GTLYHR-TAFAGATTGQQLLYAldeqvRSFE 147
Cdd:PRK06854 84 ivredlVYDIARHVDSVVHLFEEWGLPIWKDENG--KYVRRGrwqiminGESYKPiVAEAAKKALGDNVLN-----RVFI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 148 VDGLVtkyegweflgivkdEDNAARGIVAQNMTTSEIKSFGSDAVIMATGG---------PGIIFGKTTNSMINTGSAAS 218
Cdd:PRK06854 157 TDLLV--------------DDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiyrprsPGEGRGRMWYPPFNTGSGYA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 219 IVYQQGAKYANGE--FIQ------IHPTaipGDDKLRLMSES--ARGEggriwTYKdgKPWYFLEEKYPDYGNLVPrdIA 288
Cdd:PRK06854 223 MGIRAGAEMTTFEnrFIPlrfkdgYGPV---GAWFLLFKAKAvnALGE-----EYE--AKNAAELKKYVPYADYKP--IP 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 289 TreifdvCINQKLGI----NGENMVYLDLSH--KDPHELDvklggiiEIYEKF-------------TGDDPRKVPMKIFP 349
Cdd:PRK06854 291 T------CLRNYATVeenkAGRGPIYMDTEEalQDKHLES-------ELWEDFldmtpgqallwaaQNIEPEEENSEIMG 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 350 AVHYSMG------GLYVD-------------YDQMTNIKGLFAAGecDFSQHGGNRLGANSLLSaiygGTVAGPNAIKYV 410
Cdd:PRK06854 358 TEPYIVGshsgasGYWVSgpedwvpeeykwgYNRMTTVEGLFAAG--DVVGGSPHKFSSGSFAE----GRIAAKAAVRYI 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 411 ENVETTYTELDDSIYQKRVD------EEQERFDKLLNMRGTENAYKLHRELGE----IM-------TANVTVvreNDKLL 473
Cdd:PRK06854 432 LDNKDEKPEIDDDQIEELKKeiyaplERYEEFKDYSTDPDVNPNYISPEQLEErlqkIMdeyaggiSTNYTT---NEKLL 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 474 ET-DKKIV---------------ELMKRYENIDmedtQTWSNQAVFFTrqlwnMLvlarvitigayNRNESR--GAHYKP 535
Cdd:PRK06854 509 EIaLELLEmleedseklaardlhELMRCWELKH----RLLVAEAHIRH-----LL-----------FRKETRwpGYYERA 568
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 499595356 536 EFPDRNDDEWLKTTLAEYqgREEAPKFTYEPVDVS-LIPP 574
Cdd:PRK06854 569 DYPGKDDENWKCFVNSRY--DPGTGEWTIRKLPYYqIIPE 606
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
6-33 |
5.88e-05 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 45.56 E-value: 5.88e-05
10 20
....*....|....*....|....*...
gi 499595356 6 IIVVGGGLAGLMSTIKAAEQGAHVDLFS 33
Cdd:COG3075 5 VVVIGGGLAGLTAAIRAAEAGLRVAIVS 32
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
1-32 |
1.81e-04 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 44.07 E-value: 1.81e-04
10 20 30
....*....|....*....|....*....|..
gi 499595356 1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLF 32
Cdd:COG3349 1 MMPPRVVVVGGGLAGLAAAVELAEAGFRVTLL 32
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
7-198 |
1.98e-04 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 44.12 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLF---SIVPVKrshsVCAQGGinGAVN-TKGEGDSPWIHFddtvYGGdflaNQPPV 82
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLeknKKIGKK----LLISGG--GRCNlTNSCPTPEFVAY----YPR----NGKFL 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499595356 83 KAMAEA--APSIIHLLDRMGVmfsRTKEGLldfrrfGGTLYHRTAFAgattgQQLLYALDEQVRSFEVDGLVtkyeGWEF 160
Cdd:TIGR00275 67 RSALSRfsNKDLIDFFESLGL---ELKVEE------DGRVFPCSDSA-----ADVLDALLNELKELGVEILT----NSKV 128
|
170 180 190
....*....|....*....|....*....|....*...
gi 499595356 161 LGIVKDEDnaarGIVAQnmttSEIKSFGSDAVIMATGG 198
Cdd:TIGR00275 129 KSIEKEDG----GFGVE----TSGGEYEADKVIIATGG 158
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
4-32 |
4.79e-04 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 42.95 E-value: 4.79e-04
10 20
....*....|....*....|....*....
gi 499595356 4 KKIIVVGGGLAGLMSTIKAAEQGAHVDLF 32
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLI 29
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
6-29 |
1.45e-03 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 41.37 E-value: 1.45e-03
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
1-31 |
3.64e-03 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 40.23 E-value: 3.64e-03
10 20 30
....*....|....*....|....*....|.
gi 499595356 1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDL 31
Cdd:COG1148 138 PVNKRALVIGGGIAGMTAALELAEQGYEVYL 168
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
7-32 |
4.45e-03 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 39.65 E-value: 4.45e-03
10 20
....*....|....*....|....*.
gi 499595356 7 IVVGGGLAGLMSTIKAAEQGAHVDLF 32
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLL 26
|
|
| CBS_pair_ABC_OpuCA_assoc |
cd04583 |
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found associated with ... |
426-489 |
5.03e-03 |
|
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found associated with the ABC transporter OpuCA; This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in association with the ABC transporter OpuCA. OpuCA is the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment but the function of the CBS domains in OpuCA remains unknown. In the related ABC transporter, OpuA, the tandem CBS domains have been shown to function as sensors for ionic strength, whereby they control the transport activity through an electronic switching mechanism. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. They are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Pssm-ID: 341360 [Multi-domain] Cd Length: 110 Bit Score: 37.11 E-value: 5.03e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499595356 426 QKRVD-----EEQERFDKLLNMRGTENAYKLHRELGEIMTANVTVVRENDKLLETDKKIveLMKRYENI 489
Cdd:cd04583 22 EKRVDsllvvDKDNVLLGIVDIEDINRNYRKAKKVGEIMERDVFTVKEDSLLRDTVDRI--LKRGLKYV 88
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
1-40 |
8.83e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 38.70 E-value: 8.83e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 499595356 1 MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRS 40
Cdd:PRK06847 2 AAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRV 41
|
|
| TrmFO |
COG1206 |
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ... |
4-40 |
9.15e-03 |
|
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440819 Cd Length: 436 Bit Score: 38.89 E-value: 9.15e-03
10 20 30
....*....|....*....|....*....|....*..
gi 499595356 4 KKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRS 40
Cdd:COG1206 2 KPVTVIGGGLAGSEAAWQLAERGVPVRLYEMRPVKMT 38
|
|
| |
