OmpA family protein [Hoylesella timonensis]
OmpA family protein( domain architecture ID 10163224)
OmpA family membrane protein acts as a porin with low permeability that allows slow penetration of small solutes; may function in peptidoglycan binding
List of domain hits
Name | Accession | Description | Interval | E-value | |||
OmpA_C-like | cd07185 | Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
278-361 | 2.23e-21 | |||
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane. : Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 87.99 E-value: 2.23e-21
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CwlO1 super family | cl25603 | Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
219-263 | 2.67e-03 | |||
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown]; The actual alignment was detected with superfamily member COG3883: Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.43 E-value: 2.67e-03
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GlpG super family | cl42100 | Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein ... |
97-134 | 6.15e-03 | |||
Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]; The actual alignment was detected with superfamily member COG0705: Pssm-ID: 440469 [Multi-domain] Cd Length: 189 Bit Score: 37.53 E-value: 6.15e-03
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Name | Accession | Description | Interval | E-value | |||
OmpA_C-like | cd07185 | Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
278-361 | 2.23e-21 | |||
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane. Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 87.99 E-value: 2.23e-21
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OmpA | COG2885 | Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
218-361 | 7.16e-21 | |||
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 91.77 E-value: 7.16e-21
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OmpA | pfam00691 | OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
281-366 | 3.91e-14 | |||
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family. Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 67.38 E-value: 3.91e-14
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PRK10510 | PRK10510 | OmpA family lipoprotein; |
299-361 | 6.30e-05 | |||
OmpA family lipoprotein; Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 43.71 E-value: 6.30e-05
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CwlO1 | COG3883 | Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
219-263 | 2.67e-03 | |||
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown]; Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.43 E-value: 2.67e-03
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GlpG | COG0705 | Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein ... |
97-134 | 6.15e-03 | |||
Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 440469 [Multi-domain] Cd Length: 189 Bit Score: 37.53 E-value: 6.15e-03
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Name | Accession | Description | Interval | E-value | |||
OmpA_C-like | cd07185 | Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
278-361 | 2.23e-21 | |||
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane. Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 87.99 E-value: 2.23e-21
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OmpA | COG2885 | Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
218-361 | 7.16e-21 | |||
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 91.77 E-value: 7.16e-21
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OmpA | pfam00691 | OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
281-366 | 3.91e-14 | |||
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family. Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 67.38 E-value: 3.91e-14
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PRK10510 | PRK10510 | OmpA family lipoprotein; |
299-361 | 6.30e-05 | |||
OmpA family lipoprotein; Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 43.71 E-value: 6.30e-05
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motB | PRK08457 | flagellar motor protein MotB; Reviewed |
271-375 | 1.01e-04 | |||
flagellar motor protein MotB; Reviewed Pssm-ID: 181435 [Multi-domain] Cd Length: 257 Bit Score: 43.55 E-value: 1.01e-04
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CwlO1 | COG3883 | Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
219-263 | 2.67e-03 | |||
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown]; Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.43 E-value: 2.67e-03
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MotB | COG1360 | Flagellar motor protein MotB [Cell motility]; |
279-360 | 3.65e-03 | |||
Flagellar motor protein MotB [Cell motility]; Pssm-ID: 440971 [Multi-domain] Cd Length: 174 Bit Score: 37.90 E-value: 3.65e-03
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PRK10808 | PRK10808 | outer membrane protein A; Reviewed |
275-361 | 4.23e-03 | |||
outer membrane protein A; Reviewed Pssm-ID: 236764 [Multi-domain] Cd Length: 351 Bit Score: 38.90 E-value: 4.23e-03
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GlpG | COG0705 | Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein ... |
97-134 | 6.15e-03 | |||
Membrane-associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 440469 [Multi-domain] Cd Length: 189 Bit Score: 37.53 E-value: 6.15e-03
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Blast search parameters | ||||
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