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Conserved domains on  [gi|490363069|ref|WP_004242807|]
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molecular chaperone [Proteus mirabilis]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-219 6.98e-42

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 142.44  E-value: 6.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   1 MIKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQkTYIIQSWVSHYN---KEDNSEAPFIISPSLI 77
Cdd:COG3121    4 LLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDqdaGPDKATAPFVVTPPLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  78 RLAPNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDIINKSDN--KDINFFIN 155
Cdd:COG3121   83 RLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDaaEKLTWSLV 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490363069 156 DeNFIKINNPTPYFITIAEAKVD--NIDILNERITLSPFKNYSIKNKKITKNIKDKKVHWKRVDEY 219
Cdd:COG3121  163 G-NGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDY 227
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-219 6.98e-42

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 142.44  E-value: 6.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   1 MIKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQkTYIIQSWVSHYN---KEDNSEAPFIISPSLI 77
Cdd:COG3121    4 LLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDqdaGPDKATAPFVVTPPLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  78 RLAPNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDIINKSDN--KDINFFIN 155
Cdd:COG3121   83 RLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDaaEKLTWSLV 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490363069 156 DeNFIKINNPTPYFITIAEAKVD--NIDILNERITLSPFKNYSIKNKKITKNIKDKKVHWKRVDEY 219
Cdd:COG3121  163 G-NGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDY 227
PRK15211 PRK15211
fimbrial chaperone;
1-196 3.29e-25

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 98.74  E-value: 3.29e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   1 MIKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQkTYIIQSWVSHYNkEDNSEAPFIISPSLIRLA 80
Cdd:PRK15211   3 MMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQ-TYGGQVWIDNTT-QGSSTVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  81 PNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEmADKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFINDENFI 160
Cdd:PRK15211  81 PKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKA-SEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGE 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 490363069 161 KI-NNPTPYFITIAEAKVDNIDI-LNERIT-----LSPFKNYS 196
Cdd:PRK15211 160 TYlKNPTPYYFAVTGVKLNGQPVkLSDRVMneiaqLAPFSEVS 202
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-139 6.19e-22

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 87.26  E-value: 6.19e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   22 IQINKDRFFYKEQDKEILFDIRNKSEQKtYIIQSWVSHYNKE---DNSEAPFIISPSLIRLAPNENFTLKIIKTDDIKEI 98
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNP-YLVQSWVDDGNEEgtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 490363069   99 NQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPS 139
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPA 120
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-219 6.98e-42

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 142.44  E-value: 6.98e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   1 MIKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQkTYIIQSWVSHYN---KEDNSEAPFIISPSLI 77
Cdd:COG3121    4 LLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDqdaGPDKATAPFVVTPPLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  78 RLAPNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDIINKSDN--KDINFFIN 155
Cdd:COG3121   83 RLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDaaEKLTWSLV 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490363069 156 DeNFIKINNPTPYFITIAEAKVD--NIDILNERITLSPFKNYSIKNKKITKNIKDKKVHWKRVDEY 219
Cdd:COG3121  163 G-NGLTVTNPGPYYVTLSDLSLGagGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDY 227
PRK15211 PRK15211
fimbrial chaperone;
1-196 3.29e-25

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 98.74  E-value: 3.29e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   1 MIKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQkTYIIQSWVSHYNkEDNSEAPFIISPSLIRLA 80
Cdd:PRK15211   3 MMKWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQ-TYGGQVWIDNTT-QGSSTVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  81 PNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEmADKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFINDENFI 160
Cdd:PRK15211  81 PKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKA-SEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGE 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 490363069 161 KI-NNPTPYFITIAEAKVDNIDI-LNERIT-----LSPFKNYS 196
Cdd:PRK15211 160 TYlKNPTPYYFAVTGVKLNGQPVkLSDRVMneiaqLAPFSEVS 202
PRK15208 PRK15208
molecular chaperone LpfB;
17-193 5.14e-23

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 93.05  E-value: 5.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  17 SCYAS-IQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVSHYNkeDNSEAPFIISPSLIRLAPNENFTLKIIKTDDI 95
Cdd:PRK15208  17 NSFAGgVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDAN--GNKKTPFIITPPLFKLDPTKNNVLRIVNITNT 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  96 KEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDIinKSDNKDIN---FFINDENFIKINNPTPYFITI 172
Cdd:PRK15208  95 LPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGL--KGNSMDAWnklRFTRAGNQIKVENPSAFNLTF 172

                        170       180
                 ....*....|....*....|.
gi 490363069 173 AEAKVDNIDIlnERITLSPFK 193
Cdd:PRK15208 173 NQFYANGRDI--EKAGMVPAK 191
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-139 6.19e-22

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 87.26  E-value: 6.19e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   22 IQINKDRFFYKEQDKEILFDIRNKSEQKtYIIQSWVSHYNKE---DNSEAPFIISPSLIRLAPNENFTLKIIKTDDIKEI 98
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNP-YLVQSWVDDGNEEgtdEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 490363069   99 NQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPS 139
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPA 120
lfpB PRK15290
fimbrial chaperone;
17-193 2.74e-20

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 86.20  E-value: 2.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  17 SCYASIQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVSHYNKEDNSEAPFIISPSLIRLAPNENFTLKIIKTDDIK 96
Cdd:PRK15290  34 LTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEKVLRIIHTKGVS 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  97 -EINQESVYRVNIKLVPViDDEMADKNLLLISLNSIYNLFYTPSDI--INKSDNKDINFFINDENFIkINNPTPYFITIA 173
Cdd:PRK15290 114 lPDDRESVFWLNIKNIPP-SASNKATNSLEIAVKTRIKLFWRPASIrlIPEDAAPKVKWRREGRNLI-AENPNPIHISVM 191

                        170       180
                 ....*....|....*....|.
gi 490363069 174 EAKVDNIDI-LNeriTLSPFK 193
Cdd:PRK15290 192 DVIVDGHDVpLN---MIRPFE 209
PRK15295 PRK15295
fimbrial assembly chaperone;
3-182 1.44e-18

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 81.14  E-value: 1.44e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   3 KKYIVYIISFVFTFS-CYASIQINKDRFFYKEQDKEILFDIRNKsEQKTYIIQSWVSHYNKEDNSEAPFIISPSLIRLAP 81
Cdd:PRK15295   1 KHIKKSVLVVLLTSHvAHASIVVGGTRLVFDGNNDESSINVENK-DSKANLVQSWLSVVDPQVTNKQAFIITPPLFRLDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  82 NENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDeMADKNLLLISLNSIYNLFYTPSDIINKSDNK--DINFFINDENF 159
Cdd:PRK15295  80 GQKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDD-NASANRVEISINTQIKLIYRPPALTKSTPDSqsQQLKWQTAGDV 158

                        170       180
                 ....*....|....*....|...
gi 490363069 160 IKINNPTPYFITIAEAKVDNIDI 182
Cdd:PRK15295 159 ITVNNPTPYYMNFASVTLNSHEV 181
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 4-192 1.52e-18

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 81.25  E-value: 1.52e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   4 KYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSEQKTyIIQSWVSHYNKE---DNSEAPFIISPSLIRLA 80
Cdd:PRK15253  17 KILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTSlppEKIQVPFMLTPPVARVA 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  81 PNENFTLKIIKTDDIKEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDI--INKSDNKDINFFINDEN 158
Cdd:PRK15253  96 AESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIaaVTKDSFQRIGLFRSNKT 175

                        170       180       190
                 ....*....|....*....|....*....|....
gi 490363069 159 FIkINNPTPYFITIAEAKVDNIDILNERITLSPF 192
Cdd:PRK15253 176 VI-MKNDTANWITVTDVKAGNTKINDQTIMLPPL 208
PRK15195 PRK15195
molecular chaperone FimC;
2-184 3.61e-17

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 77.21  E-value: 3.61e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   2 IKKYIVYIISFVFTFSCYAS--IQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVShyNKEDNSEAPFIISPSLIRL 79
Cdd:PRK15195   5 IKLGMIIIFYLIISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIE--NSSGVKEKSFIVTPPLFVS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  80 APNENFTLKIIKTDDIKEINQESVYRVNIKLVPVID-DEMADKNLLLISLNSIYNLFYTPSDI-INKSDNKDINFFINDE 157
Cdd:PRK15195  83 EPKSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDkNALEGRNVLQLAILSRIKLFVRPINLqELPEEAPDTLKFSRSG 162

                        170       180
                 ....*....|....*....|....*..
gi 490363069 158 NFIKINNPTPYFITIAEAKVDNIDILN 184
Cdd:PRK15195 163 NHLKVHNPSPYYVTLVNLQVGSQKLGN 189
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 22-174 9.43e-17

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 76.34  E-value: 9.43e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  22 IQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVShyNKEDNSEAPFIISPSLIRLAPNENFTLKIIKTDDIKEINQE 101
Cdd:PRK15188  29 IALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVA--NADGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTDRE 106

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490363069 102 SVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFI-NDENFIKINNPTPYFITIAE 174
Cdd:PRK15188 107 SVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCrNERGQLTITNPSPYYVSMVE 180
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 20-194 2.13e-15

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 72.51  E-value: 2.13e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  20 ASIQINKDRFFYKEQDKEILFDIRNkSEQKTYIIQSWVSHYNKEDNS-EAPFIISPSLIRLAPNENFTLKIIKTDDIKEI 98
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISN-SDNVPYLIQSWAQSISETGASgDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLPE 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  99 NQESVYRVNIKLVPVIDDEmADKNLLLISLNSIYNLFYTPSDIINKSDN-KDINFFINDENFIKINNPTPYFITIAEAKV 177
Cdd:PRK15299 101 DRESLYWLDIKSIPSSNPD-NKHNTLMLAVKAEFKLIYRPKALTQKPEEvADRLTWSRQGRTLTVKNPTPYYMNFATLSV 179

                        170
                 ....*....|....*..
gi 490363069 178 DNIDILNERItLSPFKN 194
Cdd:PRK15299 180 GSQKVKAPRY-VAPFGN 195
PRK15233 PRK15233
fimbrial chaperone SefB;
19-192 1.39e-12

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 65.13  E-value: 1.39e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  19 YASIQINKDRFFYKEQDKEILFDIRNkseQKTYIIQSWVSHYNKEDNSEAPFIISPSLIRLAPNENFTLKIIKTDDIKEI 98
Cdd:PRK15233  39 YYGLRLGTTRVIYKEDAPSTSFWIMN---EKEYPILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNK 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  99 NQESVYRVNIKLVPVI-DDEMADKNLLLISL------NSIYNLFYTPSDI-INKSDNKDINFFINDENFIKINNPTPYFI 170
Cdd:PRK15233 116 NEESLYWLCVKGVPPLnDNESNNKNNITTNLnvnvvtNSCIKLIYRPKTIdLTTMEIADKLKLERKGNSIVIKNPTSSYV 195

                        170       180
                 ....*....|....*....|..
gi 490363069 171 TIAEAKVDNIDILNERITLSPF 192
Cdd:PRK15233 196 NIANIKSGNLSFNIPNGYIEPF 217
PRK15249 PRK15249
fimbrial chaperone;
2-192 1.95e-12

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 64.82  E-value: 1.95e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   2 IKKYIVYIISFVFTFSCYASIQINKDRFFYKEQDKEILFDIRNKsEQKTYIIQSWVS----HYNKEDNSEAPFIISPSLI 77
Cdd:PRK15249  10 LYYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNN-DAIPYIVQTWFDdgdmNTSPENSSAMPFIATPPVF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  78 RLAPNENFTLKIIKTDDIK-EINQESVYRVNIKLVPVID-DEMADKNLLLISLNSIYNLFYTPSDIINKSD---NKDINF 152
Cdd:PRK15249  89 RIQPKAGQVVRVIYNNTKKlPQDRESVFWFNVLQVPPTNiGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNlakKLQIKT 168

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 490363069 153 FIND--ENFIKINNPTPYFITIA--EAKVDNIDILNERITLSPF 192
Cdd:PRK15249 169 VNKGsgKSGIVIVNPQPWFASLSnlNVKVNGASYNLDADMIAPF 212
PRK15285 PRK15285
fimbrial chaperone StfD;
17-196 6.19e-12

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 63.26  E-value: 6.19e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  17 SCYASIQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVSHyNKEDNSEAPFIISPSLIRLAPNENFTLKIIKTDDIK 96
Cdd:PRK15285  22 SAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVED-EKGVKITSPLIVVPPVQRIEPSAIGQVKIQGMPALA 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  97 EINQ--ESVYRVNIKLVPVIDDEmadKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFINDE---NFIKINNPTPYFIT 171
Cdd:PRK15285 101 SLPQdrETLFYYNVREIPPQSDK---PNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQrqgNGYQVSNPTGYYVV 177

                        170       180
                 ....*....|....*....|....*
gi 490363069 172 IAEAkvdnidilNERITLSPFKNYS 196
Cdd:PRK15285 178 LSNA--------SNRMDGTPARGFS 194
PRK15218 PRK15218
fimbrial assembly chaperone;
19-196 9.71e-12

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 62.31  E-value: 9.71e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  19 YASIQINKDRFFYKEQDKEILFDIRNKSeQKTYIIQSWVSHYNKE---DNSEAPFIISPSLIRLAPNENFTLKIIKTDDI 95
Cdd:PRK15218  17 WSGIYIYGTRIIYPAQKKDITVQLMNDG-KRSSLIQAWIDNGDTSlppEKLQVPFIMTPPVIRVAANSGQQLKIKKLANN 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  96 KEINQESVYRVNIKLVPVIDDEMADKNLLLISLNSIYNLFYTPSDI--INKSDNKDINfFINDENFIKINNPTPYFITIA 173
Cdd:PRK15218  96 LPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVqkVDKATFSRLQ-LLRAPGSISVKNNSANWITIP 174

                        170       180
                 ....*....|....*....|...
gi 490363069 174 EAKVDNiDILNERITLSPFKNYS 196
Cdd:PRK15218 175 EIKAKS-KVNKETLLLAPWSSQS 196
PRK09926 PRK09926
fimbrial chaperone;
13-223 3.07e-11

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 61.27  E-value: 3.07e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  13 VFTFSCYASIQINKDRFFYKEQDKEILFDIRNKSeQKTYIIQSWVSHYNkeDNSE-----APFIISPSLIRLAPNENFTL 87
Cdd:PRK09926  18 AFSSSSIADIVISGTRIIYKSDQKDVNVRLENKG-NNPLLVQSWLDTGD--DNAEpgsikVPFTATPPVSRIDPKRGQTI 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  88 KIIKTDDIK-EINQESVYRVNIKLVP--VIDDEMADKNLLLISLNSIYNLFYTPSDII-NKSDN-KDINFFINDEN---F 159
Cdd:PRK09926  95 KLMYTASTAlPKDRESVFWFNVLEVPpkPDAEKVANQSLLQLAFRTRIKLFYRPDGLKgNPSEApLALKWSWAGSEgkaS 174

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069 160 IKINNPTPYFITIAEAKVD------NIDIlnerITLSPFKNYSIKNKKITKNIKDKKVHWKRVDEYEQTI 223
Cdd:PRK09926 175 LRVTNPTPYYVSFSSGDLEaggkryPVDS----KMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 20-173 3.16e-11

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 61.33  E-value: 3.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  20 ASIQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVShyNKEDNSEAPFIISPSLIRLAPNENFTLKIIK----TDDI 95
Cdd:PRK15254  16 AAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVT--DADGVRTDALMALPPLQRIDAGQKSQVRITQvrglTDKL 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  96 KEiNQESVYRVNIKLVPvidDEMADKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFINDEN--FIKINNPTPYFITIA 173
Cdd:PRK15254  94 PQ-DRETLFWFNVRGVP---PKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNagHLTLRNPTPYYITVA 169
PRK11385 PRK11385
fimbrial chaperone;
6-178 7.90e-11

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 60.15  E-value: 7.90e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069   6 IVYIISFVFTFSCYASIQINKDRFFYKeQDKEILFDIRNKSEQKTYIIQSWVSHYNKEDNSEA-----PFIISPSLIRLA 80
Cdd:PRK11385  12 IFAVLSLLVAGELQAGVVVGGTRFIFP-ADRESISILLTNTSQESWLINSKINRPTRWAGGEAstvpaPLLAAPPLILLK 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  81 PNENFTLKIIKTD-DIKEINQESVYRVNIKLVPvidDEMADKNLLLISLNSIYNLFYTPSDIINK--SDNKDINFFINDE 157
Cdd:PRK11385  91 PGTTGTLRLLRTEsDILPVDRETLFELSIASVP---SGKVENQSVKVAMRSVFKLFWRPEGLPGDplEAYQQLRWTRNSQ 167

                        170       180
                 ....*....|....*....|.
gi 490363069 158 NfIKINNPTPYFITIAEAKVD 178
Cdd:PRK11385 168 G-VQLTNPTPYYINLIQVSVN 187
PRK15224 PRK15224
pili assembly chaperone PapD;
21-177 1.20e-10

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 59.37  E-value: 1.20e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  21 SIQINKDRFFYKEQDKEILFDIRNkSEQKTYIIQSWVSHYNKedNSEAPFIISPSLIRLAPNENFTLKIIKTDDIKEINQ 100
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSN-PQNYPILVQSSVKAADK--SSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDR 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069 101 ESVYRVNIKLVPViDDEMADKNL------LLISLNSIYNLFYTPSDIINKSDNKDINF-FINDENFIKINNPTPYFITIA 173
Cdd:PRK15224 106 ETLQWVCIKAVPP-ENEPSDTQAkgatldLNLSINVCDKLIFRPDAVKGTPEDVAGNLrWVETGNKLKVENPTPFYMNLA 184


                 ....
gi 490363069 174 EAKV 177
Cdd:PRK15224 185 SVTV 188
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 19-194 4.39e-06

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 46.31  E-value: 4.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  19 YASIQINKDRFFYKEQDKEILFDIRNKSEQKTYIIQSWVshynkEDNSEAP----FIISPSLIRLAPNENFTLKIIKTDD 94
Cdd:PRK15274  25 HSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWL-----EDDKFAKdtryFTALPPLQRIEPKSDGQVKVQPLPA 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  95 IKEINQ--ESVYRVNIKLVPVIDDEmadKNLLLISLNSIYNLFYTPSDIINKSD-----NKDINFFINDENFIkINNPTP 167
Cdd:PRK15274 100 AASLPQdrESLFYFNVREIPPKSDK---PNTLQLALQTRIKFFYRPVAVARQVDkthpwQTKLTLTYQGDGVI-FDNPTP 175

                        170       180
                 ....*....|....*....|....*..
gi 490363069 168 YFITIAEAKVdnidilNERITLSPFKN 194
Cdd:PRK15274 176 FYLVISNAGS------KENETASGFKN 196
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
20-172 6.58e-06

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 45.85  E-value: 6.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490363069  20 ASIQINKDRFFYKEQDKEILFDIRNKSEQ----KTYIIQSWVSHYNKEDNSEAPFIISPSLIRLAPNENFTLKIIKTDDI 95
Cdd:PRK15192  22 AGVVIGGTRFIYHAGAPALSVPVSNHSEAswliDTHILPGGRWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGAP 101

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490363069  96 KEINQESVYRVNIKLVPVIDDEmadKNLLLISLNSIYNLFYTPSDIINKSDNKDINFFIN-DENFIKINNPTPYFITI 172
Cdd:PRK15192 102 LPADRESLFTLSIAAIPSGKPE---ANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSlTPDGATVRNPTPYYVTL 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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