|
Name |
Accession |
Description |
Interval |
E-value |
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
18-315 |
1.11e-149 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 422.22 E-value: 1.11e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYPGFPA-ISGEELASKFKEHAEKFGADIYNAEVV 96
Cdd:COG0492 1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGGQLATTKEIENYPGFPEgISGPELAERLREQAERFGAEILLEEVT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 97 KLEVQGDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDESIFL 176
Cdd:COG0492 81 SVDKDDGPFRVTTDDGTEYEAKAVIIATGAGPRKLGLPGEEEFEGRGVSYCATCDGFFFRGKDVVVVGGGDSALEEALYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 177 SNIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNSTVREIRGKDKVEEVVIENVKTGETKVLKADGVFIFIGLDPNS 256
Cdd:COG0492 161 TKFASKVTLIHRRDELRASKILVERLRANPKIEVLWNTEVTEIEGDGRVEGVTLKNVKTGEEKELEVDGVFVAIGLKPNT 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 257 KLLEGL-VELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVEHAAKH 315
Cdd:COG0492 241 ELLKGLgLELDEDGYIVVDEDMETSVPGVFAAGDVRDYKYRQAATAAGEGAIAALSAARY 300
|
|
| TRX_reduct |
TIGR01292 |
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ... |
19-316 |
5.67e-135 |
|
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]
Pssm-ID: 273540 [Multi-domain] Cd Length: 299 Bit Score: 384.67 E-value: 5.67e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYPGFP-AISGEELASKFKEHAEKFGADIYNAEVVK 97
Cdd:TIGR01292 1 DVIIIGAGPAGLTAAIYAARANLKPLLIEGMEPGGQLTTTTEVENYPGFPeGISGPELMEKMKEQAVKFGAEIIYEEVIK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 98 LEVQGDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDESIFLS 177
Cdd:TIGR01292 81 VDKSDRPFKVYTGDGKEYTAKAVIIATGASARKLGIPGEDEFWGRGVSYCATCDGPFFKNKEVAVVGGGDSAIEEALYLT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 178 NIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNSTVREIRGKDKVEEVVIENVKTGETKVLKADGVFIFIGLDPNSK 257
Cdd:TIGR01292 161 RIAKKVTLVHRRDKFRAEKILLDRLKKNPKIEFLWNSTVEEIVGDNKVEGVKIKNTVTGEEEELEVDGVFIAIGHEPNTE 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 490182119 258 LLEGLVELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVeHAAKHY 316
Cdd:TIGR01292 241 LLKGLLELDENGYIVTDEGMRTSVPGVFAAGDVRDKGYRQAVTAAGDGCIAA-LSAERY 298
|
|
| AhpF_homolog |
TIGR03143 |
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase ... |
18-315 |
6.85e-107 |
|
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Pssm-ID: 132187 [Multi-domain] Cd Length: 555 Bit Score: 322.50 E-value: 6.85e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYPGFPAISGEELASKFKEHAEKFGADIYNAEVVK 97
Cdd:TIGR03143 5 YDLIIIGGGPAGLSAGIYAGRAKLDTLIIEKDDFGGQITITSEVVNYPGILNTTGPELMQEMRQQAQDFGVKFLQAEVLD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 98 LEVQGDKKVVELDDGKrIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDESIFLS 177
Cdd:TIGR03143 85 VDFDGDIKTIKTARGD-YKTLAVLIATGASPRKLGFPGEEEFTGRGVAYCATCDGEFFTGMDVFVIGGGFAAAEEAVFLT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 178 NIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNSTVREIRGKDKVEEVVIENVKTGETKVLKAD------GVFIFIG 251
Cdd:TIGR03143 164 RYASKVTVIVREPDFTCAKLIAEKVKNHPKIEVKFNTELKEATGDDGLRYAKFVNNVTGEITEYKAPkdagtfGVFVFVG 243
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 252 LDPNSKLLEGLVELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVEHAAKH 315
Cdd:TIGR03143 244 YAPSSELFKGVVELDKRGYIPTNEDMETNVPGVYAAGDLRPKELRQVVTAVADGAIAATSAERY 307
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
5-308 |
7.01e-89 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 274.73 E-value: 7.01e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 5 DTGSLKK--KEIKDK--YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIeGGYVNLTHLVENYPGFPAISGEELASKFK 80
Cdd:PRK15317 195 DTGAAARaaEELNAKdpYDVLVVGGGPAGAAAAIYAARKGIRTGIVAERF-GGQVLDTMGIENFISVPETEGPKLAAALE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 81 EHAEKFGADIYNAE-VVKLEVQGDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKD 159
Cdd:PRK15317 274 EHVKEYDVDIMNLQrASKLEPAAGLIEVELANGAVLKAKTVILATGARWRNMNVPGEDEYRNKGVAYCPHCDGPLFKGKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 160 VIVVGGGDSACDESIFLSNIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNSTVREIRG-KDKVEEVVIENVKTGET 238
Cdd:PRK15317 354 VAVIGGGNSGVEAAIDLAGIVKHVTVLEFAPELKADQVLQDKLRSLPNVTIITNAQTTEVTGdGDKVTGLTYKDRTTGEE 433
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 239 KVLKADGVFIFIGLDPNSKLLEGLVELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIA 308
Cdd:PRK15317 434 HHLELEGVFVQIGLVPNTEWLKGTVELNRRGEIIVDARGATSVPGVFAAGDCTTVPYKQIIIAMGEGAKA 503
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
18-305 |
3.14e-62 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 199.47 E-value: 3.14e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEkaIEGGYVN----LTHLVENYPGFP--AISGEELASKFKEHAEKFGADI- 90
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE--DEGTCPYggcvLSKALLGAAEAPeiASLWADLYKRKEEVVKKLNNGIe 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 91 --YNAEVVKLEvQGDKKVVEL----DDGKRIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFA--GKDVIV 162
Cdd:pfam07992 79 vlLGTEVVSID-PGAKKVVLEelvdGDGETITYDRLVIATGARPRLPPIPGVELNVGFLVRTLDSAEALRLKllPKRVVV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 163 VGGGDSACDESIFLSNIVNKITMIQLLETLT------AAKVLQERVLNNpKIEVIYNSTVREIRGKDKVEEVVienvkTG 236
Cdd:pfam07992 158 VGGGYIGVELAAALAKLGKEVTLIEALDRLLrafdeeISAALEKALEKN-GVEVRLGTSVKEIIGDGDGVEVI-----LK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 237 ETKVLKADGVFIFIGLDPNSKLLEGL-VELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVADG 305
Cdd:pfam07992 232 DGTEIDADLVVVAIGRRPNTELLEAAgLELDERGGIVVDEYLRTSVPGIYAAGDCRVGGPELAQNAVAQG 301
|
|
| PRK10262 |
PRK10262 |
thioredoxin reductase; Provisional |
20-315 |
4.05e-49 |
|
thioredoxin reductase; Provisional
Pssm-ID: 182343 [Multi-domain] Cd Length: 321 Bit Score: 166.39 E-value: 4.05e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYPGFPA-ISGEELASKFKEHAEKFGADIYNAEVVKL 98
Cdd:PRK10262 9 LLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNdLTGPLLMERMHEHATKFETEIIFDHINKV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 99 EVQGDKKVVELDDGKrIEAPVVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGDSACDESIFLSN 178
Cdd:PRK10262 89 DLQNRPFRLTGDSGE-YTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 179 IVNKITMIQLLETLTAAKVLQERVLN---NPKIEVIYNSTVREIRGKDK-VEEVVIENVK-TGETKVLKADGVFIFIGLD 253
Cdd:PRK10262 168 IASEVHLIHRRDGFRAEKILIKRLMDkveNGNIILHTNRTLEEVTGDQMgVTGVRLRDTQnSDNIESLDVAGLFVAIGHS 247
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490182119 254 PNSKLLEGLVELDPyGYV-----ITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVEHAAKH 315
Cdd:PRK10262 248 PNTAIFEGQLELEN-GYIkvqsgIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERY 313
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
17-315 |
5.05e-33 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 126.35 E-value: 5.05e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGG-YVN--------------LTHLVENYPGFpAISGEELA---SK 78
Cdd:COG1249 3 DYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRLGGtCLNvgcipskallhaaeVAHEARHAAEF-GISAGAPSvdwAA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 79 FKEHAEKFGADIYNAEVVKLE------VQG-----DKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEffgkgvSYC 147
Cdd:COG1249 82 LMARKDKVVDRLRGGVEELLKkngvdvIRGrarfvDPHTVEVTGGETLTADHIVIATGSRPRVPPIPGLDE------VRV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 148 ATCDGyLFA----GKDVIVVGGGDSACdE--SIFlSNIVNKITMIQLLETL------TAAKVLQERvLNNPKIEVIYNST 215
Cdd:COG1249 156 LTSDE-ALEleelPKSLVVIGGGYIGL-EfaQIF-ARLGSEVTLVERGDRLlpgedpEISEALEKA-LEKEGIDILTGAK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 216 VREIRGKDKVEEVVIENvkTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVKGIYAVGDVR 291
Cdd:COG1249 232 VTSVEKTGDGVTVTLED--GGGEEAVEADKVLVATGRRPNTDGL-GLeaagVELDERGGIKVDEYLRTSVPGIYAIGDVT 308
|
330 340
....*....|....*....|....*
gi 490182119 292 KKnlRQIV-TAVADGAIAVEHAAKH 315
Cdd:COG1249 309 GG--PQLAhVASAEGRVAAENILGK 331
|
|
| lipoamide_DH |
TIGR01350 |
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ... |
18-314 |
5.90e-30 |
|
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Pssm-ID: 273568 [Multi-domain] Cd Length: 460 Bit Score: 118.13 E-value: 5.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGyvnlTHLveNYPGFPA---ISGEELASKFKeHAEKFGADIYNA- 93
Cdd:TIGR01350 2 YDVIVIGGGPGGYVAAIRAAQLGLKVALVEKEYLGG----TCL--NVGCIPTkalLHSAEVYDEIK-HAKDLGIEVENVs 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 94 -----------EVVKLEVQG--------------------DKKVVELDDGK---RIEAPVVIVATGANPKKLNVPgekef 139
Cdd:TIGR01350 75 vdwekmqkrknKVVKKLVGGvsgllkknkvtvikgeakflDPGTVSVTGENgeeTLEAKNIIIATGSRPRSLPGP----- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 140 FGKGVSYCATCDGYLF---AGKDVIVVGGGDSACDESIFLSNIVNKITMIQLLETL------TAAKVLQERvLNNPKIEV 210
Cdd:TIGR01350 150 FDFDGKVVITSTGALNleeVPESLVIIGGGVIGIEFASIFASLGSKVTVIEMLDRIlpgedaEVSKVLQKA-LKKKGVKI 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 211 IYNSTVREIRGKDKveEVVIENVKtGETKVLKADGVFIFIGLDPNSKL--LEGL-VELDPYGYVITDENMETSVKGIYAV 287
Cdd:TIGR01350 229 LTNTKVTAVEKNDD--QVTYENKG-GETETLTGEKVLVAVGRKPNTEGlgLEKLgVELDERGRIVVDEYMRTNVPGIYAI 305
|
330 340
....*....|....*....|....*...
gi 490182119 288 GDVR-KKNLRQivTAVADGAIAVEHAAK 314
Cdd:TIGR01350 306 GDVIgGPMLAH--VASHEGIVAAENIAG 331
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
27-288 |
1.45e-28 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 111.55 E-value: 1.45e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 27 PAGLTSAIYARRAGL-SVLVVEKAieggyvNLTHLVENYP------------------GFPAI---------------SG 72
Cdd:pfam13738 1 PAGIGCAIALKKAGLeDYLILEKG------NIGNSFYRYPthmtffspsftsngfgipDLNAIspgtspaftfnrehpSG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 73 EELASKFKEHAEKFGADI-YNAEVVKLEVQGDKKVVELDDGKrIEAPVVIVATG--ANPKKLNVPgekeffGKGVSYCAT 149
Cdd:pfam13738 75 NEYAEYLRRVADHFELPInLFEEVTSVKKEDDGFVVTTSKGT-YQARYVIIATGefDFPNKLGVP------ELPKHYSYV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 150 CDGYLFAGKDVIVVGGGDSACDESIFLSNIVNKITMI----QLLETLTAAK------VLQ--ERVLNNPKIEVIYNSTVR 217
Cdd:pfam13738 148 KDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLyrgsEWEDRDSDPSyslspdTLNrlEELVKNGKIKAHFNAEVK 227
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 218 EIRgkdkvEEVVIENVKTGETKVLKADGVFIF-IGLDPNSKLLE-GLVELDPYGY-VITDENMETSVKGIYAVG 288
Cdd:pfam13738 228 EIT-----EVDVSYKVHTEDGRKVTSNDDPILaTGYHPDLSFLKkGLFELDEDGRpVLTEETESTNVPGLFLAG 296
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
16-290 |
4.39e-28 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 112.96 E-value: 4.39e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGG---YV------------NLTHLVENYPGF------PAISGEE 74
Cdd:PRK06292 2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLGGtclNVgcipskaliaaaEAFHEAKHAEEFgihadgPKIDFKK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 75 -------LASKFKEHAEKF-----GADIY--NAEVVklevqgDKKVVELDDgKRIEAPVVIVATGAnpKKLNVPGEKEFF 140
Cdd:PRK06292 82 vmarvrrERDRFVGGVVEGlekkpKIDKIkgTARFV------DPNTVEVNG-ERIEAKNIVIATGS--RVPPIPGVWLIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 141 GKGVsycATCDGyLFAGKDV----IVVGGGDSACDESIFLSNIVNKITMIQLLETL----------TAAKVLQERvlnnp 206
Cdd:PRK06292 153 GDRL---LTSDD-AFELDKLpkslAVIGGGVIGLELGQALSRLGVKVTVFERGDRIlpledpevskQAQKILSKE----- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 207 kIEVIYNSTVREIRGKDKVEEVVIEnvKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVK 282
Cdd:PRK06292 224 -FKIKLGAKVTSVEKSGDEKVEELE--KGGKTETIEADYVLVATGRRPNTDGL-GLentgIELDERGRPVVDEHTQTSVP 299
|
....*...
gi 490182119 283 GIYAVGDV 290
Cdd:PRK06292 300 GIYAAGDV 307
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
36-313 |
5.57e-27 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 107.59 E-value: 5.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 36 ARRAGLSVLVVEKAIEGGYvnlthlvENYPGFPAISG-----EELASKFKEHAEKFGADIY-NAEVVKLEVqgDKKVVEL 109
Cdd:COG0446 1 RLGPDAEITVIEKGPHHSY-------QPCGLPYYVGGgikdpEDLLVRTPESFERKGIDVRtGTEVTAIDP--EAKTVTL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 110 DDGKRIEAPVVIVATGANPKKLNVPGEKEffgKGVSYCATCDGYL--------FAGKDVIVVGGG-------DSACDESI 174
Cdd:COG0446 72 RDGETLSYDKLVLATGARPRPPPIPGLDL---PGVFTLRTLDDADalrealkeFKGKRAVVIGGGpiglelaEALRKRGL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 175 flsnivnKITMIQLLETL------TAAKVLQERVLNNpKIEVIYNSTVREIRGKDKVEevvienVKTGETKVLKADGVFI 248
Cdd:COG0446 149 -------KVTLVERAPRLlgvldpEMAALLEEELREH-GVELRLGETVVAIDGDDKVA------VTLTDGEEIPADLVVV 214
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490182119 249 FIGLDPNSKLLEGL-VELDPYGYVITDENMETSVKGIYAVGDV---------RKKNLRQIVTAVADGAIAVEHAA 313
Cdd:COG0446 215 APGVRPNTELAKDAgLALGERGWIKVDETLQTSDPDVYAAGDCaevphpvtgKTVYIPLASAANKQGRVAAENIL 289
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
17-290 |
2.36e-26 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 107.53 E-value: 2.36e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAG--LSVLVVEKAIEGGY--VNLTHLVENypgfpAISGEELASKFKEHAEKFGADIY- 91
Cdd:COG1251 1 KMRIVIIGAGMAGVRAAEELRKLDpdGEITVIGAEPHPPYnrPPLSKVLAG-----ETDEEDLLLRPADFYEENGIDLRl 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 92 NAEVVKLEVqgDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKeffGKGVSYCATCD------GYLFAGKDVIVVGG 165
Cdd:COG1251 76 GTRVTAIDR--AARTVTLADGETLPYDKLVLATGSRPRVPPIPGAD---LPGVFTLRTLDdadalrAALAPGKRVVVIGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 166 G-------DSACDESIflsnivnKITMIQLLETL-------TAAKVLQERVLNNpKIEVIYNSTVREIRGKDKVEEVVIE 231
Cdd:COG1251 151 GligleaaAALRKRGL-------EVTVVERAPRLlprqldeEAGALLQRLLEAL-GVEVRLGTGVTEIEGDDRVTGVRLA 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490182119 232 NvktGETkvLKADGVFIFIGLDPNSKLLE--GLvELDpyGYVITDENMETSVKGIYAVGDV 290
Cdd:COG1251 223 D---GEE--LPADLVVVAIGVRPNTELARaaGL-AVD--RGIVVDDYLRTSDPDIYAAGDC 275
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
18-171 |
5.82e-25 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 103.79 E-value: 5.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GG------YVNLTHLVEN----YPGFPA-------ISGEELASKF 79
Cdd:COG2072 7 VDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDvGGtwrdnrYPGLRLDTPShlysLPFFPNwsddpdfPTGDEILAYL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 80 KEHAEKFGAD---IYNAEVVKLEVQGDKK--VVELDDGKRIEAPVVIVATGA--NPKKLNVPGEKEFfgKGVSYcATCD- 151
Cdd:COG2072 87 EAYADKFGLRrpiRFGTEVTSARWDEADGrwTVTTDDGETLTARFVVVATGPlsRPKIPDIPGLEDF--AGEQL-HSADw 163
|
170 180
....*....|....*....|..
gi 490182119 152 --GYLFAGKDVIVVGGGDSACD 171
Cdd:COG2072 164 rnPVDLAGKRVLVVGTGASAVQ 185
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
22-311 |
2.01e-24 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 102.52 E-value: 2.01e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 22 VVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVnLTHlvenypGFPAisgeelaskFKEhaEKfgaDIYNAEV------ 95
Cdd:COG0493 126 VVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGL-LRY------GIPE---------FRL--PK---DVLDREIelieal 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 96 -VKL----EVQGDKKVVELDdgKRIEApvVIVATGA-NPKKLNVPGEK--------EF---FGKGVSYcatcDGYLFAGK 158
Cdd:COG0493 185 gVEFrtnvEVGKDITLDELL--EEFDA--VFLATGAgKPRDLGIPGEDlkgvhsamDFltaVNLGEAP----DTILAVGK 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 159 DVIVVGGGDSACD----------ESIFLSNIVNKITMIQLLETLTAAKvlQErvlnnpKIEVIYNSTVREIRGKD--KVE 226
Cdd:COG0493 257 RVVVIGGGNTAMDcartalrlgaESVTIVYRRTREEMPASKEEVEEAL--EE------GVEFLFLVAPVEIIGDEngRVT 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 227 EVVIENVK---------------TGETKVLKADGVFIFIGLDPNSKLLEGL--VELDPYGYVITDE-NMETSVKGIYAVG 288
Cdd:COG0493 329 GLECVRMElgepdesgrrrpvpiEGSEFTLPADLVILAIGQTPDPSGLEEElgLELDKRGTIVVDEeTYQTSLPGVFAGG 408
|
330 340
....*....|....*....|....*
gi 490182119 289 DVRK--KNlrqIVTAVADGAIAVEH 311
Cdd:COG0493 409 DAVRgpSL---VVWAIAEGRKAARA 430
|
|
| MerA |
TIGR02053 |
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon ... |
18-312 |
4.50e-23 |
|
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH. [Cellular processes, Detoxification]
Pssm-ID: 273944 [Multi-domain] Cd Length: 463 Bit Score: 98.65 E-value: 4.50e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY-VN--------------LTHLVEN----------YPGFPA--- 69
Cdd:TIGR02053 1 YDLVIIGSGAAAFAAAIKAAELGASVAMVERGPLGGTcVNvgcvpskmllraaeVAHYARKppfgglaatvAVDFGElle 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 70 ----ISGEELASKFKEHAEKFGADIYNAEVVKLevqgDKKVVELDDGKRIE-APVVIVATGANPKKLNVPGEKEffgkgV 144
Cdd:TIGR02053 81 gkreVVEELRHEKYEDVLSSYGVDYLRGRARFK----DPKTVKVDLGREVRgAKRFLIATGARPAIPPIPGLKE-----A 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 145 SYCaTCDGYLFAG---KDVIVVGGGDSACDESIFLSNIVNKITMIQLLETL-----TAAKVLQERVLNNPKIEVIYNSTV 216
Cdd:TIGR02053 152 GYL-TSEEALALDripESLAVIGGGAIGVELAQAFARLGSEVTILQRSDRLlpreePEISAAVEEALAEEGIEVVTSAQV 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 217 REIRGKDkvEEVVIENVKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVKGIYAVGDVrK 292
Cdd:TIGR02053 231 KAVSVRG--GGKIITVEKPGGQGEVEADELLVATGRRPNTDGL-GLekagVKLDERGGILVDETLRTSNPGIYAAGDV-T 306
|
330 340
....*....|....*....|
gi 490182119 293 KNLRQIVTAVADGAIAVEHA 312
Cdd:TIGR02053 307 GGLQLEYVAAKEGVVAAENA 326
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
18-315 |
1.65e-22 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 97.14 E-value: 1.65e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY-VN--------LTHLVENYpgfpaisgEEL--ASKFKEHAEKF 86
Cdd:PRK06416 5 YDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLGGTcLNrgcipskaLLHAAERA--------DEArhSEDFGIKAENV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 87 GADI-----YNAEVV-----------------------KLEVQGDKKVVELDDGKRIEAPVVIVATGANPKKLnvPGeKE 138
Cdd:PRK06416 77 GIDFkkvqeWKNGVVnrltggvegllkknkvdiirgeaKLVDPNTVRVMTEDGEQTYTAKNIILATGSRPREL--PG-IE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 139 FFGKGVsycATCDGYL---FAGKDVIVVGGGDSACDESIFLSNIVNKITMIQLLETLTA------AKVLqERVLNNPKIE 209
Cdd:PRK06416 154 IDGRVI---WTSDEALnldEVPKSLVVIGGGYIGVEFASAYASLGAEVTIVEALPRILPgedkeiSKLA-ERALKKRGIK 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 210 VIYNSTVREI-RGKDKVEeVVIEnvKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDpYGYVITDENMETSVKGI 284
Cdd:PRK06416 230 IKTGAKAKKVeQTDDGVT-VTLE--DGGKEETLEADYVLVAVGRRPNTENL-GLeelgVKTD-RGFIEVDEQLRTNVPNI 304
|
330 340 350
....*....|....*....|....*....|.
gi 490182119 285 YAVGDVRKKnLRQIVTAVADGAIAVEHAAKH 315
Cdd:PRK06416 305 YAIGDIVGG-PMLAHKASAEGIIAAEAIAGN 334
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
9-310 |
4.07e-22 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 96.02 E-value: 4.07e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 9 LKKKEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLthlvenY--PGF--PaisgEELASKFKEHAE 84
Cdd:PRK11749 132 LFKRAPKTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLLR------YgiPEFrlP----KDIVDREVERLL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 85 KFGADI-YNAEVvklevqGdkKVVELDD-GKRIEApvVIVATGA-NPKKLNVPGEkEFfgKGVSYC---------ATCDG 152
Cdd:PRK11749 202 KLGVEIrTNTEV------G--RDITLDElRAGYDA--VFIGTGAgLPRFLGIPGE-NL--GGVYSAvdfltrvnqAVADY 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 153 YLFAGKDVIVVGGGDSACDESIflsnivnkiTMIQL------------LETLTAAKVLQErvlnNPK---IEVIYNSTVR 217
Cdd:PRK11749 269 DLPVGKRVVVIGGGNTAMDAAR---------TAKRLgaesvtivyrrgREEMPASEEEVE----HAKeegVEFEWLAAPV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 218 EIRGKDK----VEEVVIENVK-----------TGETKVLKADGVFIFIGLDPNSKLLEGL--VELDPYGYVITDE-NMET 279
Cdd:PRK11749 336 EILGDEGrvtgVEFVRMELGEpdasgrrrvpiEGSEFTLPADLVIKAIGQTPNPLILSTTpgLELNRWGTIIADDeTGRT 415
|
330 340 350
....*....|....*....|....*....|..
gi 490182119 280 SVKGIYAVGD-VRKKNLrqIVTAVADGAIAVE 310
Cdd:PRK11749 416 SLPGVFAGGDiVTGAAT--VVWAVGDGKDAAE 445
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
22-305 |
6.62e-19 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 86.76 E-value: 6.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 22 VVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GGyvnlthLVEnYpGFPAISGEelaskfKEHAEKfGADIYNAEVVKL-- 98
Cdd:PRK12810 148 VVGSGPAGLAAADQLARAGHKVTVFERADRiGG------LLR-Y-GIPDFKLE------KEVIDR-RIELMEAEGIEFrt 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 99 --EVQGDKKVVELDDgkriEAPVVIVATGA-NPKKLNVPGEKeffGKGVsYCA---------TCDGY------LFAGKDV 160
Cdd:PRK12810 213 nvEVGKDITAEELLA----EYDAVFLGTGAyKPRDLGIPGRD---LDGV-HFAmdfliqntrRVLGDetepfiSAKGKHV 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 161 IVVGGGDSACD---ESIflsnivnkitmiqlleTLTAAKVLQ---------ERVLNNP------KIEV----------IY 212
Cdd:PRK12810 285 VVIGGGDTGMDcvgTAI----------------RQGAKSVTQrdimpmppsRRNKNNPwpywpmKLEVsnaheegverEF 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 213 NSTVREIRGKD-KVEEVVIENVK---------TGETKVLKADGVFIFIGLD-PNSKLLEGL-VELDPYGYVI-TDENMET 279
Cdd:PRK12810 349 NVQTKEFEGENgKVTGVKVVRTElgegdfepvEGSEFVLPADLVLLAMGFTgPEAGLLAQFgVELDERGRVAaPDNAYQT 428
|
330 340
....*....|....*....|....*..
gi 490182119 280 SVKGIYAVGD-VRKKNLrqIVTAVADG 305
Cdd:PRK12810 429 SNPKVFAAGDmRRGQSL--VVWAIAEG 453
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
16-312 |
1.27e-16 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 79.86 E-value: 1.27e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY-VN--------------LTHLVEN--YPGFPaISGE----- 73
Cdd:PRK06370 4 QRYDAIVIGAGQAGPPLAARAAGLGMKVALIERGLLGGTcVNtgcvptktliasarAAHLARRaaEYGVS-VGGPvsvdf 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 74 --------ELASKFKEHAEKFGADIYNAEVVklevQG-----DKKVVELDdGKRIEAPVVIVATGANPKKLNVPGEKEff 140
Cdd:PRK06370 83 kavmarkrRIRARSRHGSEQWLRGLEGVDVF----RGharfeSPNTVRVG-GETLRAKRIFINTGARAAIPPIPGLDE-- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 141 gkgVSYCaTCDGyLFAGKDV----IVVGGGDSACDESIFLSNIVNKITMI----QLL--ETLTAAKVLQErVLNNPKIEV 210
Cdd:PRK06370 156 ---VGYL-TNET-IFSLDELpehlVIIGGGYIGLEFAQMFRRFGSEVTVIergpRLLprEDEDVAAAVRE-ILEREGIDV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 211 IYNSTVREIRGKDkvEEVVIENVKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVKGIYA 286
Cdd:PRK06370 230 RLNAECIRVERDG--DGIAVGLDCNGGAPEITGSHILVAVGRVPNTDDL-GLeaagVETDARGYIKVDDQLRTTNPGIYA 306
|
330 340
....*....|....*....|....*...
gi 490182119 287 VGDVrkkNLRQIVT--AVADGAIAVEHA 312
Cdd:PRK06370 307 AGDC---NGRGAFThtAYNDARIVAANL 331
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
17-290 |
7.41e-16 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 77.48 E-value: 7.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARR---AGLSVLVVEKaieggyvNLTHLVenYPGFP-----AISGEELASKFKEHAEKFGA 88
Cdd:COG1252 1 MKRIVIVGGGFAGLEAARRLRKklgGDAEVTLIDP-------NPYHLF--QPLLPevaagTLSPDDIAIPLRELLRRAGV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 89 DIYNAEVVKLEVqgDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEFfgkGVSYCATCDGYLF------------- 155
Cdd:COG1252 72 RFIQGEVTGIDP--EARTVTLADGRTLSYDYLVIATGSVTNFFGIPGLAEH---ALPLKTLEDALALrerllaaferaer 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 156 -AGKDVIVVGGG----------DSACDESIFLSNIVN---KITMIQ----LLETLT------AAKVLQERvlnnpKIEVI 211
Cdd:COG1252 147 rRLLTIVVVGGGptgvelagelAELLRKLLRYPGIDPdkvRITLVEagprILPGLGeklseaAEKELEKR-----GVEVH 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 212 YNSTVREIRGkDKVEevvienVKTGETkvLKADGVFIFIGLDPNSkLLEGL-VELDPYGYVITDENMET-SVKGIYAVGD 289
Cdd:COG1252 222 TGTRVTEVDA-DGVT------LEDGEE--IPADTVIWAAGVKAPP-LLADLgLPTDRRGRVLVDPTLQVpGHPNVFAIGD 291
|
.
gi 490182119 290 V 290
Cdd:COG1252 292 C 292
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
18-290 |
1.16e-15 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 77.12 E-value: 1.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAiyaRRA---GLSVLVVE-KAIEGGYVN--------LTHlvenypgfpaisgeelASKFKEHAEK 85
Cdd:PRK06116 5 YDLIVIGGGSGGIASA---NRAamyGAKVALIEaKRLGGTCVNvgcvpkklMWY----------------GAQIAEAFHD 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 86 FGADiY------------------NAEVVKLE--------------VQG-----DKKVVELDdGKRIEAPVVIVATGANP 128
Cdd:PRK06116 66 YAPG-YgfdvtenkfdwaklianrDAYIDRLHgsyrnglenngvdlIEGfarfvDAHTVEVN-GERYTADHILIATGGRP 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 129 KKLNVPGEKeffgkgvsYCATCDGYlFA----GKDVIVVGGGDSACDesifLSNIVN----KITMI-----------QLL 189
Cdd:PRK06116 144 SIPDIPGAE--------YGITSDGF-FAleelPKRVAVVGAGYIAVE----FAGVLNglgsETHLFvrgdaplrgfdPDI 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 190 ETLtaakvLQErVLNNPKIEVIYNSTVREI-RGKDKVEEVVIENvktGETkvLKADGVFIFIGLDPNSKLLeGL----VE 264
Cdd:PRK06116 211 RET-----LVE-EMEKKGIRLHTNAVPKAVeKNADGSLTLTLED---GET--LTVDCLIWAIGREPNTDGL-GLenagVK 278
|
330 340
....*....|....*....|....*.
gi 490182119 265 LDPYGYVITDENMETSVKGIYAVGDV 290
Cdd:PRK06116 279 LNEKGYIIVDEYQNTNVPGIYAVGDV 304
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
17-127 |
3.73e-15 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 74.59 E-value: 3.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKA-----------------------------------IEGGYV------ 55
Cdd:COG0654 3 RTDVLIVGGGPAGLALALALARAGIRVTVVERAppprpdgrgialsprslellrrlglwdrllargapIRGIRVrdgsdg 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490182119 56 -NLTHLVENYPGFPA---ISGEELASKFKEHAEKFGADI-YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATGAN 127
Cdd:COG0654 83 rVLARFDAAETGLPAglvVPRADLERALLEAARALGVELrFGTEVTGLEQDADGVTVTLADGRTLRADLVVGADGAR 159
|
|
| PTZ00058 |
PTZ00058 |
glutathione reductase; Provisional |
8-289 |
6.72e-15 |
|
glutathione reductase; Provisional
Pssm-ID: 185420 [Multi-domain] Cd Length: 561 Bit Score: 75.04 E-value: 6.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 8 SLKKKEIKDkYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY-VNL---------------------------TH 59
Cdd:PTZ00058 40 HLKKKPRMV-YDLIVIGGGSGGMAAARRAARNKAKVALVEKDYLGGTcVNVgcvpkkimfnaasihdilensrhygfdTQ 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 60 LVENYPGFPAISGEELASK---FKEHAEKFGADIY---------NAEVVKLEVQGDKK---------------VVELDDG 112
Cdd:PTZ00058 119 FSFNLPLLVERRDKYIRRLndiYRQNLKKDNVEYFegkgsllseNQVLIKKVSQVDGEadesdddevtivsagVSQLDDG 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 113 KRIEAPVVIVATGANPKKLNVpgekeffgKGVSYCATCDGY--LFAGKDVIVVGGGDSACDesifLSNIVNKITMIQLLe 190
Cdd:PTZ00058 199 QVIEGKNILIAVGNKPIFPDV--------KGKEFTISSDDFfkIKEAKRIGIAGSGYIAVE----LINVVNRLGAESYI- 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 191 TLTAAKVLQ---ERVLN-------NPKIEVIYNSTVREIrgkDKVEEVVIENVKTGETKVLKADGVFIFIGLDPNSKLL- 259
Cdd:PTZ00058 266 FARGNRLLRkfdETIINelendmkKNNINIITHANVEEI---EKVKEKNLTIYLSDGRKYEHFDYVIYCVGRSPNTEDLn 342
|
330 340 350
....*....|....*....|....*....|.
gi 490182119 260 -EGLVELDPYGYVITDENMETSVKGIYAVGD 289
Cdd:PTZ00058 343 lKALNIKTPKGYIKVDDNQRTSVKHIYAVGD 373
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
20-311 |
1.14e-14 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 73.49 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVnlthLVENYPGFpAISGEELASKFKEHAEKfGADIY-NAEVV-- 96
Cdd:PRK12770 21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGL----MLFGIPEF-RIPIERVREGVKELEEA-GVVFHtRTKVCcg 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 97 --KLEVQGD---KKVVELDD-GKRIEApvVIVATGA-NPKKLNVPGEKeffGKGVsYCATcdGYLF-------------- 155
Cdd:PRK12770 95 epLHEEEGDefvERIVSLEElVKKYDA--VLIATGTwKSRKLGIPGED---LPGV-YSAL--EYLFriraaklgylpwek 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 156 ----AGKDVIVVGGGDSACD---ESIFLSniVNKITMI--QLLETLTAAKVLQERvLNNPKIEVIYNSTVREIRGKDKVE 226
Cdd:PRK12770 167 vppvEGKKVVVVGAGLTAVDaalEAVLLG--AEKVYLAyrRTINEAPAGKYEIER-LIARGVEFLELVTPVRIIGEGRVE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 227 EVVIENVK---------------TGETKVLKADGVFIFIGLDPNS--KLLEGLVELDPYGYVITDENMETSVKGIYAVGD 289
Cdd:PRK12770 244 GVELAKMRlgepdesgrprpvpiPGSEFVLEADTVVFAIGEIPTPpfAKECLGIELNRKGEIVVDEKHMTSREGVFAAGD 323
|
330 340
....*....|....*....|..
gi 490182119 290 VRKKNlRQIVTAVADGAIAVEH 311
Cdd:PRK12770 324 VVTGP-SKIGKAIKSGLRAAQS 344
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
9-289 |
3.46e-14 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 72.74 E-value: 3.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 9 LKKKEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVnlthLVENYPGFpAISGEELASKFKEHAEKFGA 88
Cdd:PRK12831 132 LSETEEKKGKKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGV----LVYGIPEF-RLPKETVVKKEIENIKKLGV 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 89 DIYNAEVVKLEVqgdkKVVELDDGKRIEApvVIVATGAN-PKKLNVPGE--------KEFFGKGVSYCATCDGY---LFA 156
Cdd:PRK12831 207 KIETNVVVGKTV----TIDELLEEEGFDA--VFIGSGAGlPKFMGIPGEnlngvfsaNEFLTRVNLMKAYKPEYdtpIKV 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 157 GKDVIVVGGGDSACD---ESIFL---SNIVNKIT---MIQLLETLTAAKvlQE----RVLNNPkIEVI--YNSTVREIR- 220
Cdd:PRK12831 281 GKKVAVVGGGNVAMDaarTALRLgaeVHIVYRRSeeeLPARVEEVHHAK--EEgvifDLLTNP-VEILgdENGWVKGMKc 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 221 -----------GKDKVEEVvienvkTGETKVLKADGVFIFIGLDPNSKLLE---GLvELDPYGYVITDENM-ETSVKGIY 285
Cdd:PRK12831 358 ikmelgepdasGRRRPVEI------EGSEFVLEVDTVIMSLGTSPNPLISSttkGL-KINKRGCIVADEETgLTSKEGVF 430
|
....
gi 490182119 286 AVGD 289
Cdd:PRK12831 431 AGGD 434
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
25-127 |
6.07e-14 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 70.77 E-value: 6.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 25 GGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLV-------ENYPGFPA-----ISGEELASKFK------------ 80
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLlpraleeLEPLGLDEplerpVRGARFYSPGGksvelppgrggg 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490182119 81 -------------EHAEKFGADIY-NAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATGAN 127
Cdd:COG0644 81 yvvdrarfdrwlaEQAEEAGAEVRtGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGAR 141
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
21-125 |
8.03e-14 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 71.23 E-value: 8.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 21 VVVGGGPAGLTSAIYARRAGLSVLVVEKA--------IEG-GYVNLTHL------VENYPG-----FPAISG---EELAS 77
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNpkvgrkilISGgGRCNFTNSeplpefLNYYGGnphflKSALSRftpEDLIA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490182119 78 KFKEH-----------------------------AEKFGADI-YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATG 125
Cdd:COG2081 81 FFEGLgietkeessgrvfpdsskasdilrallaeLREAGVEIrLRTRVTGIEKEDGGFGVETPDGETVRADAVVLATG 158
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
19-313 |
1.09e-12 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 68.35 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GGYVNltHLVENYPGF--PAISGEELASKFKEHAekfGADIY-NAE 94
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPElGGRAA--QLHKTFPGLdcPQCILEPLIAEVEANP---NITVYtGAE 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 95 VVKLE-VQGDKKV-VELDDGKRIEAPV--VIVATGANPKKlnvPGEKEFFGKGVSycatcdgylfagKDVI-------VV 163
Cdd:COG1148 217 VEEVSgYVGNFTVtIKKGPREEIEIEVgaIVLATGFKPYD---PTKLGEYGYGKY------------PNVItnlelerLL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 164 GGGDSACDESIflsNIVNKITMIQ------------------LLETLTAAKVLQERvlnNPKIEVI-------------- 211
Cdd:COG1148 282 AAGKILRPSDG---KEPKSVAFIQcvgsrdeenglpycsrvcCMYALKQALYLKEK---NPDADVYifyrdirtygkyee 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 212 -YNSTVRE----IRGK-DKVEE-------VVIENVKTGETKVLKADGVFIFIGLDPN------SKLLEglVELDPYGYVI 272
Cdd:COG1148 356 fYRRAREDgvrfIRGRvAEIEEdeggklvVTVEDTLLGEPVEIEADLVVLATGMVPSedneelAKLLK--LPLDQDGFFL 433
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 490182119 273 TDE----NMETSVKGIYAVGDVRK-KNlrqIVTAVADGAIAVEHAA 313
Cdd:COG1148 434 EAHpklrPVETATDGIFLAGAAHGpKD---IPESIAQATAAAARAI 476
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
8-290 |
1.14e-12 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 68.62 E-value: 1.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 8 SLKKKEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVnlthLVENYPGFpaisgeELASKFKEHaekfg 87
Cdd:PRK12778 422 SVPEVAEKNGKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGV----LKYGIPEF------RLPKKIVDV----- 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 88 aDIYNaeVVKLEVQGDK-----KVVELDDGKRIEAPVVIVATGAN-PKKLNVPGEK--------EFFGKGVSYCATCDGY 153
Cdd:PRK12778 487 -EIEN--LKKLGVKFETdvivgKTITIEELEEEGFKGIFIASGAGlPNFMNIPGENsngvmssnEYLTRVNLMDAASPDS 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 154 ---LFAGKDVIVVGGGDSACD----------ESIFLSNIVNKITMIQLLETLTAAKvlQERV----LNNPkIEVIYNStv 216
Cdd:PRK12778 564 dtpIKFGKKVAVVGGGNTAMDsartakrlgaERVTIVYRRSEEEMPARLEEVKHAK--EEGIefltLHNP-IEYLADE-- 638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 217 reirgKDKVEEVVIENVKTGE---------------TKVLKADGVFIFIGLDPN---SKLLEGLvELDPYGYVITDENME 278
Cdd:PRK12778 639 -----KGWVKQVVLQKMELGEpdasgrrrpvaipgsTFTVDVDLVIVSVGVSPNplvPSSIPGL-ELNRKGTIVVDEEMQ 712
|
330
....*....|..
gi 490182119 279 TSVKGIYAVGDV 290
Cdd:PRK12778 713 SSIPGIYAGGDI 724
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
17-290 |
3.47e-12 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 66.72 E-value: 3.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK--AIEGGYVN--------LTHLVENYPGFpaiSGEELASKFKEHAEKF 86
Cdd:PRK05249 5 DYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERyrNVGGGCTHtgtipskaLREAVLRLIGF---NQNPLYSSYRVKLRIT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 87 GADIYN--AEVVKLEV---------------QGDKK-------VVELDDGK--RIEAPVVIVATGANPKKlnvPGEKEFF 140
Cdd:PRK05249 82 FADLLAraDHVINKQVevrrgqyernrvdliQGRARfvdphtvEVECPDGEveTLTADKIVIATGSRPYR---PPDVDFD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 141 GKGVsYCAtcDGYL---FAGKDVIVVGGGDSACD-ESIFlSNIVNKITMI----QLLETL----TAAKVLQERVLNnpkI 208
Cdd:PRK05249 159 HPRI-YDS--DSILsldHLPRSLIIYGAGVIGCEyASIF-AALGVKVTLIntrdRLLSFLddeiSDALSYHLRDSG---V 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 209 EVIYNSTVREIRGKDkveEVVIENVKTGetKVLKADGVFIFIGLDPNSKLLE----GLvELDPYGYVITDENMETSVKGI 284
Cdd:PRK05249 232 TIRHNEEVEKVEGGD---DGVIVHLKSG--KKIKADCLLYANGRTGNTDGLNlenaGL-EADSRGQLKVNENYQTAVPHI 305
|
....*.
gi 490182119 285 YAVGDV 290
Cdd:PRK05249 306 YAVGDV 311
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
18-141 |
3.87e-12 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 65.80 E-value: 3.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY------VNLTHLVENYPGFPAISGEELASKF------------ 79
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYkpcggaLSPRALEELDLPGELIVNLVRGARFfspngdsveipi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 80 -----------------KEHAEKFGADI-YNAEVVKLEVQGDKKVVELDDGKR-IEAPVVIVATGAN---PKKLNVPGEK 137
Cdd:TIGR02032 81 etelayvidrdafdeqlAERAQEAGAELrLGTRVLDVEIHDDRVVVIVRGSEGtVTAKIVIGADGSRsivAKKLGLKKEP 160
|
....
gi 490182119 138 EFFG 141
Cdd:TIGR02032 161 REYG 164
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
9-128 |
1.18e-11 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 64.45 E-value: 1.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 9 LKKKEIKDkydIVVVGGGPAGLTSAIYARRAGLSVlvvekaieggyvnltHLVENYPGFPAISGEELASKFKEHAEKFGA 88
Cdd:COG0446 119 LKEFKGKR---AVVIGGGPIGLELAEALRKRGLKV---------------TLVERAPRLLGVLDPEMAALLEEELREHGV 180
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 490182119 89 DIY-NAEVVKLEvqGDKKV-VELDDGKRIEAPVVIVATGANP 128
Cdd:COG0446 181 ELRlGETVVAID--GDDKVaVTLTDGEEIPADLVVVAPGVRP 220
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
21-125 |
1.65e-11 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 64.54 E-value: 1.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 21 VVVGGGPAGLTSAIYARRAGLSVLVVEKAIE---------GGYVNLTH------LVENYPG------------------- 66
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKNKKigkkllisgGGRCNLTNscptpeFVAYYPRngkflrsalsrfsnkdlid 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490182119 67 -----------------FP-AISGEELASKFKEHAEKFGADI-YNAEVVKLEVQGDKKVVELDDGKrIEAPVVIVATG 125
Cdd:TIGR00275 81 ffeslglelkveedgrvFPcSDSAADVLDALLNELKELGVEIlTNSKVKSIEKEDGGFGVETSGGE-YEADKVIIATG 157
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
20-315 |
1.82e-11 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 64.85 E-value: 1.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAG--LTSAIYARRAG---LSVLVVEKAIEGGYVNLTHLVENypgfpAISGEELASKFKEHAEKFGADIYNAE 94
Cdd:TIGR02374 1 LVLVGNGMAGhrCIEEVLKLNRHmfeITIFGEEPHPNYNRILLSSVLQG-----EADLDDITLNSKDWYEKHGITLYTGE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 95 VVkLEVQGDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKEffgKGVSYCAT---CDGYLFAG---KDVIVVGGGDS 168
Cdd:TIGR02374 76 TV-IQIDTDQKQVITDAGRTLSYDKLILATGSYPFILPIPGADK---KGVYVFRTiedLDAIMAMAqrfKKAAVIGGGLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 169 ACDESIFLSNIVNKITMIQLLETL-------TAAKVLQeRVLNNPKIEVIYNSTVREIRGKDKVEEVvieNVKTGEtkVL 241
Cdd:TIGR02374 152 GLEAAVGLQNLGMDVSVIHHAPGLmakqldqTAGRLLQ-RELEQKGLTFLLEKDTVEIVGATKADRI---RFKDGS--SL 225
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 242 KADGVFIFIGLDPNSKLLEGlVELDPYGYVITDENMETSVKGIYAVGDVRKKNLRqIVTAVADGAIAVEHAAKH 315
Cdd:TIGR02374 226 EADLIVMAAGIRPNDELAVS-AGIKVNRGIIVNDSMQTSDPDIYAVGECAEHNGR-VYGLVAPLYEQAKVLADH 297
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
20-289 |
2.74e-11 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 63.91 E-value: 2.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARR--AGLSVLVVEK--AIEGGYVNLTHLVENYpgFPaiSGEELASKFKEHAEKFGADIY-NAE 94
Cdd:PRK09564 3 IIIIGGTAAGMSAAAKAKRlnKELEITVYEKtdIVSFGACGLPYFVGGF--FD--DPNTMIARTPEEFIKSGIDVKtEHE 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 95 VVKLEVQGDKKVVE-LDDGKRIEAPV--VIVATGANPKklnVPGEKEFFGKGVSYCATC-DGYLF-------AGKDVIVV 163
Cdd:PRK09564 79 VVKVDAKNKTITVKnLKTGSIFNDTYdkLMIATGARPI---IPPIKNINLENVYTLKSMeDGLALkellkdeEIKNIVII 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 164 GGGDSACDESIFLSNIVNKITMIQLLETLTAAKV------LQERVLNNPKIEVIYNSTVREIRGKDKVEEVVIENvktGE 237
Cdd:PRK09564 156 GAGFIGLEAVEAAKHLGKNVRIIQLEDRILPDSFdkeitdVMEEELRENGVELHLNEFVKSLIGEDKVEGVVTDK---GE 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 490182119 238 tkvLKADGVFIFIGLDPNSKLLEG-LVELDPYGYVITDENMETSVKGIYAVGD 289
Cdd:PRK09564 233 ---YEADVVIVATGVKPNTEFLEDtGLKTLKNGAIIVDEYGETSIENIYAAGD 282
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
17-303 |
4.03e-11 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 63.33 E-value: 4.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK----------AIEGGYVNLTHLVENYPGFPAISGEELaskfkEHAEKF 86
Cdd:TIGR01438 2 DYDLIVIGGGSGGLAAAKEAAAYGAKVMLLDFvtptplgtrwGIGGTCVNVGCIPKKLMHQAALLGQAL-----KDSRNY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 87 GADIYNA-----EVVKLEVQG--------------DKKVV------ELDDGKRIE------------APVVIVATGANPK 129
Cdd:TIGR01438 77 GWKVEETvkhdwKRLVEAVQNhigslnwgyrvalrEKKVKyenayaEFVDKHRIKatnkkgkekiysAERFLIATGERPR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 130 KLNVPGEKEffgkgvsYCATCDGyLFA-----GKdVIVVGGGDSACDESIFLSNIVNKITMiqlletLTAAKVLQ--ERV 202
Cdd:TIGR01438 157 YPGIPGAKE-------LCITSDD-LFSlpycpGK-TLVVGASYVALECAGFLAGIGLDVTV------MVRSILLRgfDQD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 203 LNNPKIEVIYNSTVREIRG--KDKVEE----VVIENVKTGETKVLKADGVFIFIGLDPNSKLLE----GLVELDPYGYVI 272
Cdd:TIGR01438 222 CANKVGEHMEEHGVKFKRQfvPIKVEQieakVLVEFTDSTNGIEEEYDTVLLAIGRDACTRKLNlenvGVKINKKTGKIP 301
|
330 340 350
....*....|....*....|....*....|.
gi 490182119 273 TDENMETSVKGIYAVGDVRKKnlRQIVTAVA 303
Cdd:TIGR01438 302 ADEEEQTNVPYIYAVGDILED--KPELTPVA 330
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
15-67 |
9.69e-11 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 62.17 E-value: 9.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GGYVNlthlVENYPGF 67
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTpGGRAR----TFERPGF 50
|
|
| PRK07845 |
PRK07845 |
flavoprotein disulfide reductase; Reviewed |
20-312 |
1.32e-10 |
|
flavoprotein disulfide reductase; Reviewed
Pssm-ID: 236112 [Multi-domain] Cd Length: 466 Bit Score: 61.80 E-value: 1.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVenyPGFPAISGEELASKFKEhAEKFGADIYNAEVVKLE 99
Cdd:PRK07845 4 IVIIGGGPGGYEAALVAAQLGADVTVIERDGLGGAAVLTDCV---PSKTLIATAEVRTELRR-AAELGIRFIDDGEARVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 100 VQ-----------------------------------------GDKKVVELDDG--KRIEAPVVIVATGANPKKLnvPGe 136
Cdd:PRK07845 80 LPavnarvkalaaaqsadirarleregvrviagrgrlidpglgPHRVKVTTADGgeETLDADVVLIATGASPRIL--PT- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 137 keffgkgvsycATCDG-------YLFAGKDV----IVVGGG------DSACDEsiflsnIVNKITMI----QLL--ETLT 193
Cdd:PRK07845 157 -----------AEPDGeriltwrQLYDLDELpehlIVVGSGvtgaefASAYTE------LGVKVTLVssrdRVLpgEDAD 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 194 AAKVLqERVLNNPKIEVIYNS---TVReiRGKDKVEevvienVKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELD 266
Cdd:PRK07845 220 AAEVL-EEVFARRGMTVLKRSraeSVE--RTGDGVV------VTLTDGRTVEGSHALMAVGSVPNTAGL-GLeeagVELT 289
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 490182119 267 PYGYVITDENMETSVKGIYAVGDVRKKNLRQIVTAVaDGAIAVEHA 312
Cdd:PRK07845 290 PSGHITVDRVSRTSVPGIYAAGDCTGVLPLASVAAM-QGRIAMYHA 334
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
20-311 |
2.06e-10 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 61.43 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GGYVnlthlveNYpGFPAIsgeelaskfkehaeKFGADIYNAEV--- 95
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKlGGMM-------RY-GIPAY--------------RLPREVLDAEIqri 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 96 ------VKLEVQGDKKVVELDDGKRIEApvVIVATGAN-PKKLNVPGEK--------EF---FGKGvsycatcdGYLFAG 157
Cdd:PRK12771 198 ldlgveVRLGVRVGEDITLEQLEGEFDA--VFVAIGAQlGKRLPIPGEDaagvldavDFlraVGEG--------EPPFLG 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 158 KDVIVVGGGDSACD-----------ESIFLSnIVNKITMIQLLETLTAAkvLQERVlnnpkiEVIYNSTVREIRGKDK-- 224
Cdd:PRK12771 268 KRVVVIGGGNTAMDaartarrlgaeEVTIVY-RRTREDMPAHDEEIEEA--LREGV------EINWLRTPVEIEGDENga 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 225 -----VEEVVIENVK-------TGETKVLKADGVFIFIGLDPNSKLLEGLVEL-DPYGYVITDEN-METSVKGIYAVGDV 290
Cdd:PRK12771 339 tglrvITVEKMELDEdgrpspvTGEEETLEADLVVLAIGQDIDSAGLESVPGVeVGRGVVQVDPNfMMTGRPGVFAGGDM 418
|
330 340
....*....|....*....|.
gi 490182119 291 RKKNlRQIVTAVADGAIAVEH 311
Cdd:PRK12771 419 VPGP-RTVTTAIGHGKKAARN 438
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
17-126 |
2.22e-10 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 60.69 E-value: 2.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK---------------------------------AIE------------ 51
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLERgrpgsgasgrnagqlrpglaaladralvrlareALDlwrelaaelgid 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 52 -----GGYVNLTH-------LVENYP-----GFPA--ISGEELASKF-----------------------------KEHA 83
Cdd:COG0665 82 cdfrrTGVLYLARteaelaaLRAEAEalralGLPVelLDAAELREREpglgspdyagglydpddghvdpaklvralARAA 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 490182119 84 EKFGADIY-NAEVVKLEVQGDK-KVVELDDGkRIEAPVVIVATGA 126
Cdd:COG0665 162 RAAGVRIReGTPVTGLEREGGRvTGVRTERG-TVRADAVVLAAGA 205
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
15-125 |
2.99e-10 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 60.62 E-value: 2.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK--------AIEGGYVNLTH--------------------------- 59
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKvpprgghtAAAQGGINAAGtnvqkaagedspeehfydtvkggdgla 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 60 -------LVEN----------------------YPGF-----------PAISGEELASKFKEHAEKFGADIY-NAEVVKL 98
Cdd:COG1053 81 dqdlveaLAEEapeaidwleaqgvpfsrtpdgrLPQFgghsvgrtcyaGDGTGHALLATLYQAALRLGVEIFtETEVLDL 160
|
170 180 190
....*....|....*....|....*....|...
gi 490182119 99 eVQGDKKV----VELDDGK--RIEAPVVIVATG 125
Cdd:COG1053 161 -IVDDGRVvgvvARDRTGEivRIRAKAVVLATG 192
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
17-290 |
3.89e-10 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 60.53 E-value: 3.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVE--KAIEGGY-VN--------LTHLVENYPGFPAISGEE------LASKF 79
Cdd:PRK07251 3 TYDLIVIGFGKAGKTLAAKLASAGKKVALVEesKAMYGGTcINigciptktLLVAAEKNLSFEQVMATKntvtsrLRGKN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 80 KEHAEKFGADIYNAEVVKLEvqgdKKVVEL---DDGKRIEAPVVIVATGANPKKLNVPGEKEffGKGVsYCATCDGYLFA 156
Cdd:PRK07251 83 YAMLAGSGVDLYDAEAHFVS----NKVIEVqagDEKIELTAETIVINTGAVSNVLPIPGLAD--SKHV-YDSTGIQSLET 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 157 -GKDVIVVGGGDSACDESIFLSNIVNKITMIQLLETLTA-----AKVLQERVLNNPKIEVIYNSTVREIrgKDKVEEVVI 230
Cdd:PRK07251 156 lPERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPreepsVAALAKQYMEEDGITFLLNAHTTEV--KNDGDQVLV 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 231 envkTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVKGIYAVGDV 290
Cdd:PRK07251 234 ----VTEDETYRFDALLYATGRKPNTEPL-GLentdIELTERGAIKVDDYCQTSVPGVFAVGDV 292
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
18-125 |
1.19e-09 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 58.75 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE---------GGYVNLTH-------LVENYPGFPA------------ 69
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKlgrkilisgGGRCNVTNlseepdnFLSRYPGNPKflksalsrftpw 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 70 -----ISGEELASKFKEH--------------------AEKFGADI-YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVA 123
Cdd:pfam03486 81 dfiafFESLGVPLKEEDHgrlfpdsdkasdivdallneLKELGVKIrLRTRVLSVEKDDDGRFRVKTGGEELEADSLVLA 160
|
..
gi 490182119 124 TG 125
Cdd:pfam03486 161 TG 162
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
160-232 |
1.39e-09 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 53.75 E-value: 1.39e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490182119 160 VIVVGGGDSACDESIFLSNIVNKITMIQLLETL------TAAKVLQERVLNNpKIEVIYNSTVREIRGKDKVEEVVIEN 232
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERRDRLlpgfdpEIAKILQEKLEKN-GIEFLLNTTVEAIEGNGDGVVVVLTD 79
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
16-290 |
3.40e-09 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 57.63 E-value: 3.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-------GGyvnlTHL-VENYPGFPAISGEELASKFKEHAEKFG 87
Cdd:PRK06327 3 KQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEAWKNpkgkpalGG----TCLnVGCIPSKALLASSEEFENAGHHFADHG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 88 ADIYNAEV-VKLEVQGDKKVVE---------------------------LDDGKRIE----------APVVIVATGANPK 129
Cdd:PRK06327 79 IHVDGVKIdVAKMIARKDKVVKkmtggieglfkknkitvlkgrgsfvgkTDAGYEIKvtgedetvitAKHVIIATGSEPR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 130 KLnvPGEKeFFGKGVsycATCDGYLFAG---KDVIVVGGGDSACDESIFLSNIVNKITMIQLLETL----------TAAK 196
Cdd:PRK06327 159 HL--PGVP-FDNKII---LDNTGALNFTevpKKLAVIGAGVIGLELGSVWRRLGAEVTILEALPAFlaaadeqvakEAAK 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 197 VLQERVLNnpkieVIYNSTVREIRGKDKVEEVVIENVKtGETKVLKADGVFIFIGLDPNSK--LLEGL-VELDPYGYVIT 273
Cdd:PRK06327 233 AFTKQGLD-----IHLGVKIGEIKTGGKGVSVAYTDAD-GEAQTLEVDKLIVSIGRVPNTDglGLEAVgLKLDERGFIPV 306
|
330
....*....|....*..
gi 490182119 274 DENMETSVKGIYAVGDV 290
Cdd:PRK06327 307 DDHCRTNVPNVYAIGDV 323
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
19-125 |
4.07e-09 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 57.23 E-value: 4.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEK--------------AIEGGYVNLTHLV-------------ENYPGFPAIS 71
Cdd:pfam12831 1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERrgflggmltsglvgPDMGFYLNKEQVVggiarefrqrlraRGGLPGPYGL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490182119 72 G--------EELASKFKEHAEKFGADI-YNAEVVKLEVQGDK----KVVELDDGKRIEAPVVIVATG 125
Cdd:pfam12831 81 RggwvpfdpEVAKAVLDEMLAEAGVTVlLHTRVVGVVKEGGRitgvTVETKGGRITIRAKVFIDATG 147
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
16-144 |
5.66e-09 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 56.81 E-value: 5.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE---GGyvNLTH--------------LVENYP------------- 65
Cdd:PRK08274 3 SMVDVLVIGGGNAALCAALAAREAGASVLLLEAAPRewrGG--NSRHtrnlrcmhdapqdvLVGAYPeeefwqdllrvtg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 66 -------------------------------------------GFPAISGEELASKFKEHAEKFGADI-YNAEVVKLEVQ 101
Cdd:PRK08274 81 grtdealarlliressdcrdwmrkhgvrfqpplsgalhvartnAFFWGGGKALVNALYRSAERLGVEIrYDAPVTALELD 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 490182119 102 GDKKV-VEL----DDGKRIEAPVVIVATG---ANPKKLnvpgeKEFFGKGV 144
Cdd:PRK08274 161 DGRFVgARAgsaaGGAERIRAKAVVLAAGgfeSNREWL-----REAWGQPA 206
|
|
| PRK13748 |
PRK13748 |
putative mercuric reductase; Provisional |
7-289 |
1.94e-08 |
|
putative mercuric reductase; Provisional
Pssm-ID: 184298 [Multi-domain] Cd Length: 561 Bit Score: 55.54 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 7 GSLKKKEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY-VN--------------LTHLVENYPgF---- 67
Cdd:PRK13748 88 GADKHSGNERPLHVAVIGSGGAAMAAALKAVEQGARVTLIERGTIGGTcVNvgcvpskimiraahIAHLRRESP-Fdggi 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 68 ----PAISGEELASKFKEHAEKFGADIYNA--------EVVKLEVQ---GDKKVVELDDG--KRIEAPVVIVATGANPKK 130
Cdd:PRK13748 167 aatvPTIDRSRLLAQQQARVDELRHAKYEGildgnpaiTVLHGEARfkdDQTLIVRLNDGgeRVVAFDRCLIATGASPAV 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 131 LNVPGEKEffgkgVSYCATCDGyLFAG---KDVIVVGGGDSACDESIFLSNIVNKITMI---QLL--------ETLTAAk 196
Cdd:PRK13748 247 PPIPGLKE-----TPYWTSTEA-LVSDtipERLAVIGSSVVALELAQAFARLGSKVTILarsTLFfredpaigEAVTAA- 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 197 vlqervLNNPKIEVIYNSTVREIRGKDkvEEVVIENvKTGEtkvLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVI 272
Cdd:PRK13748 320 ------FRAEGIEVLEHTQASQVAHVD--GEFVLTT-GHGE---LRADKLLVATGRAPNTRSL-ALdaagVTVNAQGAIV 386
|
330
....*....|....*..
gi 490182119 273 TDENMETSVKGIYAVGD 289
Cdd:PRK13748 387 IDQGMRTSVPHIYAAGD 403
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
19-49 |
7.76e-08 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 53.06 E-value: 7.76e-08
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKG 31
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
19-49 |
7.81e-08 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 53.44 E-value: 7.81e-08
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK07804 18 DVVVVGSGVAGLTAALAARRAGRRVLVVTKA 48
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
15-49 |
1.17e-07 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 53.12 E-value: 1.17e-07
10 20 30
....*....|....*....|....*....|....*
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK07843 5 VQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKA 39
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
20-290 |
1.32e-07 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 52.62 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLS--VLVVEKAIEGGYVNlthlvenypgfPAISGEELASKFKEHAEKFGADIYNAEVVK 97
Cdd:PRK09754 6 IIIVGGGQAAAMAAASLRQQGFTgeLHLFSDERHLPYER-----------PPLSKSMLLEDSPQLQQVLPANWWQENNVH 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 98 L-------EVQGDKKVVELDDGKRIEAPVVIVATGANPKK---LNVPGEKEFFGKGVSYCATCDGYLFAGKDVIVVGGGD 167
Cdd:PRK09754 75 LhsgvtikTLGRDTRELVLTNGESWHWDQLFIATGAAARPlplLDALGERCFTLRHAGDAARLREVLQPERSVVIVGAGT 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 168 SACDESIFLSNIVNKITMIQLLETL---TAAKVLQERVLNNPK---IEVIYNSTVREIRGKDKVEEVVienvKTGETkvL 241
Cdd:PRK09754 155 IGLELAASATQRRCKVTVIELAATVmgrNAPPPVQRYLLQRHQqagVRILLNNAIEHVVDGEKVELTL----QSGET--L 228
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 490182119 242 KADGVFIFIGLDPNSKLLEGlVELDPYGYVITDENMETSVKGIYAVGDV 290
Cdd:PRK09754 229 QADVVIYGIGISANDQLARE-ANLDTANGIVIDEACRTCDPAIFAGGDV 276
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
17-89 |
1.79e-07 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 52.16 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAI-----------------EGGYVN-----LTHLVENYPGFP-AISG- 72
Cdd:PRK05329 2 KFDVLVIGGGLAGLTAALAAAEAGKRVALVAKGQgalhfssgsidllgylpDGQPVSdpfeaLAALAEQAPEHPySLVGa 81
|
90 100
....*....|....*....|
gi 490182119 73 ---EELASKFKEHAEKFGAD 89
Cdd:PRK05329 82 davREALAQFQALLEAAGLP 101
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
12-53 |
2.66e-07 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 51.76 E-value: 2.66e-07
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 490182119 12 KEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK-AIEGG 53
Cdd:PRK06481 56 SELKDKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKmPVAGG 98
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
19-144 |
3.52e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 51.03 E-value: 3.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA-----------------------------IEGGY----VNL-----THL 60
Cdd:PRK06847 6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEIDpewrvygagitlqgnalralrelgvldecLEAGFgfdgVDLfdpdgTLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 61 VE---------NYPGFPAISGEELASKFKEHAEKFGADI-YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATGANPK- 129
Cdd:PRK06847 86 AElptprlagdDLPGGGGIMRPALARILADAARAAGADVrLGTTVTAIEQDDDGVTVTFSDGTTGRYDLVVGADGLYSKv 165
|
170
....*....|....*...
gi 490182119 130 -KLNVPG--EKEFFGKGV 144
Cdd:PRK06847 166 rSLVFPDepEPEYTGQGV 183
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
19-127 |
3.94e-07 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 51.05 E-value: 3.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVN---------LTH----LVENYPGFPAISGEElASKFK----- 80
Cdd:TIGR01988 1 DIVIVGGGMVGLALALALARSGLKVALIEATPLPAPADpgfdnrvsaLSAasirLLEKLGVWDKIEPAR-AQPIRdihvs 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 81 --------------EHAEKFGADIYN----------------------AEVVKLEVQGDKKVVELDDGKRIEAPVVIVAT 124
Cdd:TIGR01988 80 dggsfgalrfdadeIGLEALGYVVENrvlqqalwerlqelpnvtllcpARVVELPRHSDHVELTLDDGQQLRARLLVGAD 159
|
...
gi 490182119 125 GAN 127
Cdd:TIGR01988 160 GAN 162
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
19-54 |
4.66e-07 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 50.47 E-value: 4.66e-07
10 20 30
....*....|....*....|....*....|....*.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGY 54
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
20-298 |
4.81e-07 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 50.94 E-value: 4.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARR--AGLSVLVVEKAIEGGYVNLthlvenypGFPAISGEELASK----------FKEhAEKFG 87
Cdd:PRK13512 4 IIVVGAVAGGATCASQIRRldKESDIIIFEKDRDMSFANC--------ALPYYIGEVVEDRkyalaytpekFYD-RKQIT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 88 ADIYNaEVVKLEVQGDK-KVVELDDGKRIEAP--VVIVATGANPKKLNVPGEKEFFGKGVSYCATCDGYLFA--GKDVIV 162
Cdd:PRK13512 75 VKTYH-EVIAINDERQTvTVLNRKTNEQFEESydKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKAnqVDKALV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 163 VGGGDSACDesiFLSNIVNKITMIQLLETLTAAKVLQERVLNNPKIEVIYNstvREI--RGKDKVEEVVIENVKTGETKV 240
Cdd:PRK13512 154 VGAGYISLE---VLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDK---REIpyRLNEEIDAINGNEVTFKSGKV 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 490182119 241 LKADGVFIFIGLDPNSKLLEGL-VELDPYGYVITDENMETSVKGIYAVGDVRKKNLRQI 298
Cdd:PRK13512 228 EHYDMIIEGVGTHPNSKFIESSnIKLDDKGFIPVNDKFETNVPNIYAIGDIITSHYRHV 286
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
17-46 |
6.24e-07 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 50.56 E-value: 6.24e-07
10 20 30
....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVV 46
Cdd:COG3075 2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIV 31
|
|
| PRK07846 |
PRK07846 |
mycothione reductase; Reviewed |
102-290 |
7.63e-07 |
|
mycothione reductase; Reviewed
Pssm-ID: 181142 [Multi-domain] Cd Length: 451 Bit Score: 50.34 E-value: 7.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 102 GDKKVVELDDGKRIEAPVVIVATGANPKKLNVPGEKeffgkGVSYcATCDGYLFAG---KDVIVVGGGDSACDESIFLSN 178
Cdd:PRK07846 114 IGPKTLRTGDGEEITADQVVIAAGSRPVIPPVIADS-----GVRY-HTSDTIMRLPelpESLVIVGGGFIAAEFAHVFSA 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 179 IVNKITMI----QLLETLTAAkvLQERV--LNNPKIEVIYNSTVREIRGKDKVEEVVIENvktGETkvLKADGVFIFIGL 252
Cdd:PRK07846 188 LGVRVTVVnrsgRLLRHLDDD--ISERFteLASKRWDVRLGRNVVGVSQDGSGVTLRLDD---GST--VEADVLLVATGR 260
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 490182119 253 DPNSKLLE---GLVELDPYGYVITDENMETSVKGIYAVGDV 290
Cdd:PRK07846 261 VPNGDLLDaaaAGVDVDEDGRVVVDEYQRTSAEGVFALGDV 301
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
17-55 |
7.71e-07 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 50.22 E-value: 7.71e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIE-GGYV 55
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRvGGLI 40
|
|
| PLN02463 |
PLN02463 |
lycopene beta cyclase |
18-125 |
9.56e-07 |
|
lycopene beta cyclase
Pssm-ID: 178082 [Multi-domain] Cd Length: 447 Bit Score: 50.10 E-value: 9.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAieggyvNLTHLVENY--------------------PG----------- 66
Cdd:PLN02463 29 VDLVVVGGGPAGLAVAQQVSEAGLSVCCIDPS------PLSIWPNNYgvwvdefealglldcldttwPGavvyiddgkkk 102
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 67 -----FPAISGEELASKFKEHAEKFGADIYNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATG 125
Cdd:PLN02463 103 dldrpYGRVNRKKLKSKMLERCIANGVQFHQAKVKKVVHEESKSLVVCDDGVKIQASLVLDATG 166
|
|
| carotene-cycl |
TIGR01790 |
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ... |
19-135 |
1.47e-06 |
|
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.
Pssm-ID: 130850 [Multi-domain] Cd Length: 388 Bit Score: 49.35 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVN-------------LTHLVEN-YPGFPAISGEELASK------ 78
Cdd:TIGR01790 1 DLAVIGGGPAGLAIALELARPGLRVQLIEPHPPIPGNHtygvwdddlsdlgLADCVEHvWPDVYEYRFPKQPRKlgtayg 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490182119 79 ------FKEH----AEKFGADIYNAEVVKLEVQG-DKKVVELDDGKRIEAPVVIVATGANPKKLNVPG 135
Cdd:TIGR01790 81 svdstrLHEEllqkCPEGGVLWLERKAIHAEADGvALSTVYCAGGQRIQARLVIDARGFGPLVQYVRF 148
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
15-127 |
2.38e-06 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 48.75 E-value: 2.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLT------HLVEN-YPGFPA-------ISGEELA---- 76
Cdd:PRK10157 3 EDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTggrlyaHSLEHiIPGFADsapverlITHEKLAfmte 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 77 -------------------------SKFK----EHAEKFGADIYNAEVVKLEVQGDKKVVELD-DGKRIEAPVVIVATGA 126
Cdd:PRK10157 83 ksamtmdycngdetspsqrsysvlrSKFDawlmEQAEEAGAQLITGIRVDNLVQRDGKVVGVEaDGDVIEAKTVILADGV 162
|
.
gi 490182119 127 N 127
Cdd:PRK10157 163 N 163
|
|
| PRK12842 |
PRK12842 |
putative succinate dehydrogenase; Reviewed |
15-48 |
2.87e-06 |
|
putative succinate dehydrogenase; Reviewed
Pssm-ID: 237224 [Multi-domain] Cd Length: 574 Bit Score: 48.54 E-value: 2.87e-06
10 20 30
....*....|....*....|....*....|....
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK12842 7 ELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEK 40
|
|
| PRK12839 |
PRK12839 |
FAD-dependent oxidoreductase; |
18-49 |
4.40e-06 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237223 [Multi-domain] Cd Length: 572 Bit Score: 47.90 E-value: 4.40e-06
10 20 30
....*....|....*....|....*....|..
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK12839 9 YDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKA 40
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
16-76 |
5.18e-06 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 47.63 E-value: 5.18e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAieggyvNLTHLVEnypgfPAISGEELA 76
Cdd:PRK09126 2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQ------PLAALAD-----PAFDGREIA 51
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
18-128 |
5.79e-06 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 47.64 E-value: 5.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAI-YARRA--GLSVLVVEKAIEGG----Y--------VNLT------------HLVE-----NYP 65
Cdd:COG4529 6 KRIAIIGGGASGTALAIhLLRRApePLRITLFEPRPELGrgvaYstdspehlLNVPagrmsafpddpdHFLRwlrenGAR 85
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 490182119 66 GFPAIS----------GEELASKFKEHAEKFGADI----YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATGANP 128
Cdd:COG4529 86 AAPAIDpdafvprrlfGEYLRERLAEALARAPAGVrlrhIRAEVVDLERDDGGYRVTLADGETLRADAVVLATGHPP 162
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
9-128 |
6.19e-06 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 47.43 E-value: 6.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 9 LKKKEIKDKYDIVVVGGGPAG--LTSAIYARragLSVLVVEKAIEGGYVNLtHLVENYPGFPAISGEELASKFKEHAEKF 86
Cdd:COG1252 141 FERAERRRLLTIVVVGGGPTGveLAGELAEL---LRKLLRYPGIDPDKVRI-TLVEAGPRILPGLGEKLSEAAEKELEKR 216
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 490182119 87 GADIY-NAEVVklEVQGDKkvVELDDGKRIEAPVVIVATG--ANP 128
Cdd:COG1252 217 GVEVHtGTRVT--EVDADG--VTLEDGEEIPADTVIWAAGvkAPP 257
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
11-160 |
7.29e-06 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 47.23 E-value: 7.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 11 KKEIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLTHLVENYpgfpaisgeelasKFKEHAEKfGADI 90
Cdd:PRK09754 138 REVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRY-------------LLQRHQQA-GVRI 203
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490182119 91 YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATGANPK-KLNVPGEKEFFGKGV--SYCATCDGYLFAGKDV 160
Cdd:PRK09754 204 LLNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGISANdQLAREANLDTANGIVidEACRTCDPAIFAGGDV 276
|
|
| PRK10015 |
PRK10015 |
oxidoreductase; Provisional |
16-69 |
7.73e-06 |
|
oxidoreductase; Provisional
Pssm-ID: 182194 [Multi-domain] Cd Length: 429 Bit Score: 47.28 E-value: 7.73e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVNLT------HLVEN-YPGFPA 69
Cdd:PRK10015 4 DKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTggrlyaHTLEAiIPGFAA 64
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
17-47 |
1.02e-05 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 46.84 E-value: 1.02e-05
10 20 30
....*....|....*....|....*....|..
gi 490182119 17 KYDIVVVGGGPAGLTSAiYA-RRAGLSVLVVE 47
Cdd:COG1231 7 GKDVVIVGAGLAGLAAA-RElRKAGLDVTVLE 37
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
22-49 |
1.02e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 42.52 E-value: 1.02e-05
10 20
....*....|....*....|....*...
gi 490182119 22 VVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKR 28
|
|
| PRK12843 |
PRK12843 |
FAD-dependent oxidoreductase; |
16-48 |
1.17e-05 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237225 [Multi-domain] Cd Length: 578 Bit Score: 46.65 E-value: 1.17e-05
10 20 30
....*....|....*....|....*....|...
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK12843 15 AEFDVIVIGAGAAGMSAALFAAIAGLKVLLVER 47
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
20-112 |
1.48e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 42.58 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEggyvnlthlvenypgFPAISGEELASKFKEHAEKFGADI-YNAEVVKL 98
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERRDR---------------LLPGFDPEIAKILQEKLEKNGIEFlLNTTVEAI 66
|
90
....*....|....
gi 490182119 99 EVQGDKKVVELDDG 112
Cdd:pfam00070 67 EGNGDGVVVVLTDG 80
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
18-52 |
1.78e-05 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 46.18 E-value: 1.78e-05
10 20 30
....*....|....*....|....*....|....*
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEG 52
Cdd:PRK07803 9 YDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFG 43
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
17-127 |
2.18e-05 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 45.39 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK-----------------------------AIEGGYVN--LTHLVEN-- 63
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERhattsvlprahglnqrtmellrqagledrILAEGVPHegMGLAFYNtr 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 64 ---------YPGFPAISGE-ELASKFKEHAEKFGADIY-NAEVVKLE-----VQGDKKVVELDDGKRIEAPVVIVATGAN 127
Cdd:pfam01494 81 rradldfltSPPRVTVYPQtELEPILVEHAEARGAQVRfGTEVLSLEqdgdgVTAVVRDRRDGEEYTVRAKYLVGCDGGR 160
|
|
| PRK12775 |
PRK12775 |
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ... |
20-290 |
2.29e-05 |
|
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Pssm-ID: 183738 [Multi-domain] Cd Length: 1006 Bit Score: 46.09 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKA-IEGGyvnlthlVENYpGFPAIsgeelaskfkehaeKFGADIYNAEVVKL 98
Cdd:PRK12775 433 VAICGSGPAGLAAAADLVKYGVDVTVYEALhVVGG-------VLQY-GIPSF--------------RLPRDIIDREVQRL 490
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 99 EVQGDK----KVV-------ELDDGKRIEAPVVIVATGAnPKKLNVPGE--------KEFFGK----GVSYCATCDGYLF 155
Cdd:PRK12775 491 VDIGVKietnKVIgktftvpQLMNDKGFDAVFLGVGAGA-PTFLGIPGEfagqvysaNEFLTRvnlmGGDKFPFLDTPIS 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 156 AGKDVIVVGGGDSACDeSIFLSNIVNKIT---MIQLLETLTAAKVLQERVLNNPKIEV--------IYNSTVREIRGKdK 224
Cdd:PRK12775 570 LGKSVVVIGAGNTAMD-CLRVAKRLGAPTvrcVYRRSEAEAPARIEEIRHAKEEGIDFfflhspveIYVDAEGSVRGM-K 647
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 225 VEEVVI---------ENVKTGETKVLKADGVFIFIGLDPN---SKLLEGLVeLDPYGYVITDENM-----ETSVKGIYAV 287
Cdd:PRK12775 648 VEEMELgepdekgrrKPMPTGEFKDLECDTVIYALGTKANpiiTQSTPGLA-LNKWGNIAADDGKlestqSTNLPGVFAG 726
|
...
gi 490182119 288 GDV 290
Cdd:PRK12775 727 GDI 729
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
16-125 |
2.65e-05 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 45.52 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIY-ARRAGLSVLVVEK-------------------------------AIEG----------- 52
Cdd:COG0579 3 EMYDVVIIGAGIVGLALARElSRYEDLKVLVLEKeddvaqessgnnsgvihaglyytpgslkarlCVEGnelfyelcrel 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 53 --GYVNLTHLV-----ENYP------------GF---------------PAISGE----------------ELASKFKEH 82
Cdd:COG0579 83 giPFKRCGKLVvatgeEEVAfleklyergkanGVpgleildreelrelePLLSDEgvaalyspstgivdpgALTRALAEN 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 490182119 83 AEKFGADI-YNAEVVKLEVQGDKKVVELDDGkRIEAPVVIVATG 125
Cdd:COG0579 163 AEANGVELlLNTEVTGIEREGDGWEVTTNGG-TIRARFVINAAG 205
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
18-49 |
5.64e-05 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 44.75 E-value: 5.64e-05
10 20 30
....*....|....*....|....*....|..
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK12844 7 YDVVVVGSGGGGMCAALAAADSGLEPLIVEKQ 38
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
16-57 |
6.93e-05 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 44.11 E-value: 6.93e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK--------AIEGGYVNL 57
Cdd:PRK07121 19 DEADVVVVGFGAAGACAAIEAAAAGARVLVLERaagaggatALSGGVIYL 68
|
|
| PLN02507 |
PLN02507 |
glutathione reductase |
92-290 |
7.65e-05 |
|
glutathione reductase
Pssm-ID: 215281 [Multi-domain] Cd Length: 499 Bit Score: 44.04 E-value: 7.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 92 NAEVVKLEVQG---DKKVVELD--DG--KRIEAPVVIVATGANPKKLNVPGEKeffgkgvsYCATCDGYLFAG---KDVI 161
Cdd:PLN02507 136 NAGVKLYEGEGkivGPNEVEVTqlDGtkLRYTAKHILIATGSRAQRPNIPGKE--------LAITSDEALSLEelpKRAV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 162 VVGGGDSACDESIFLSNIVNKITMIQLLET-LTA----AKVLQERVLNNPKIEVIYNSTVREIrgkDKVEEVVIENVKTG 236
Cdd:PLN02507 208 VLGGGYIAVEFASIWRGMGATVDLFFRKELpLRGfddeMRAVVARNLEGRGINLHPRTNLTQL---TKTEGGIKVITDHG 284
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 490182119 237 ETkvLKADGVFIFIGLDPNSKL--LEGL-VELDPYGYVITDENMETSVKGIYAVGDV 290
Cdd:PLN02507 285 EE--FVADVVLFATGRAPNTKRlnLEAVgVELDKAGAVKVDEYSRTNIPSIWAIGDV 339
|
|
| PLN02546 |
PLN02546 |
glutathione reductase |
92-308 |
8.60e-05 |
|
glutathione reductase
Pssm-ID: 215301 [Multi-domain] Cd Length: 558 Bit Score: 44.10 E-value: 8.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 92 NAEVVKLEVQG---DKKVVELDdGKRIEAPVVIVATGANPKKLNVPGekeffgkgVSYCATCDGYL---FAGKDVIVVGG 165
Cdd:PLN02546 190 NAGVTLIEGRGkivDPHTVDVD-GKLYTARNILIAVGGRPFIPDIPG--------IEHAIDSDAALdlpSKPEKIAIVGG 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 166 GDSACDesifLSNIVNKitmiqlLETLTAAKVLQERVLNNpkieviYNSTVRE-------IRG----KDKVEEVVIE--- 231
Cdd:PLN02546 261 GYIALE----FAGIFNG------LKSDVHVFIRQKKVLRG------FDEEVRDfvaeqmsLRGiefhTEESPQAIIKsad 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 232 ---NVKTGETKVLKADGVFIFIGLDPNSKLLeGL----VELDPYGYVITDENMETSVKGIYAVGDVRKK-NLrqivTAVA 303
Cdd:PLN02546 325 gslSLKTNKGTVEGFSHVMFATGRKPNTKNL-GLeevgVKMDKNGAIEVDEYSRTSVPSIWAVGDVTDRiNL----TPVA 399
|
....*...
gi 490182119 304 ---DGAIA 308
Cdd:PLN02546 400 lmeGGALA 407
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
18-48 |
9.99e-05 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 43.74 E-value: 9.99e-05
10 20 30
....*....|....*....|....*....|.
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK06183 11 TDVVIVGAGPVGLTLANLLGQYGVRVLVLER 41
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
15-46 |
1.04e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 43.35 E-value: 1.04e-04
10 20 30
....*....|....*....|....*....|..
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVV 46
Cdd:PRK07494 5 KEHTDIAVIGGGPAGLAAAIALARAGASVALV 36
|
|
| PRK06134 |
PRK06134 |
putative FAD-binding dehydrogenase; Reviewed |
18-48 |
1.24e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 180419 [Multi-domain] Cd Length: 581 Bit Score: 43.56 E-value: 1.24e-04
10 20 30
....*....|....*....|....*....|.
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK06134 13 CDVLVIGSGAAGLSAAVTAAWHGLKVIVVEK 43
|
|
| NAD_binding_9 |
pfam13454 |
FAD-NAD(P)-binding; |
21-125 |
1.57e-04 |
|
FAD-NAD(P)-binding;
Pssm-ID: 433222 [Multi-domain] Cd Length: 155 Bit Score: 41.49 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 21 VVVGGGPAGLTSAIY----ARRAGLSVLVVEKAIEG------GYVNLTHLVeNYPG-----FPAIS-------------- 71
Cdd:pfam13454 1 AIVGGGPSGLALLERllarAPKRPLEITLFDPSPPGaggvyrTDQSPEHLL-NVPAsrmslFPDDPphflewlrargald 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 490182119 72 ----------------GEELASKFKEHAEKFGADI----YNAEVVKLEVQGDKKVVELDDGKRIEAPVVIVATG 125
Cdd:pfam13454 80 eapgldpddfppralyGRYLRDRFEEALARAPAGVtvrvHRARVTDLRPRGDGYRVLLADGRTLAADAVVLATG 153
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
17-47 |
2.73e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 42.25 E-value: 2.73e-04
10 20 30
....*....|....*....|....*....|.
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGLSVLVVE 47
Cdd:PRK07608 5 KFDVVVVGGGLVGASLALALAQSGLRVALLA 35
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
16-47 |
3.01e-04 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 42.55 E-value: 3.01e-04
10 20 30
....*....|....*....|....*....|..
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVE 47
Cdd:PLN02976 692 DRKKIIVVGAGPAGLTAARHLQRQGFSVTVLE 723
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
15-47 |
3.16e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.09 E-value: 3.16e-04
10 20 30
....*....|....*....|....*....|...
gi 490182119 15 KDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVE 47
Cdd:COG3573 3 AMDADVIVVGAGLAGLVAAAELADAGRRVLLLD 35
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
19-49 |
3.48e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 41.89 E-value: 3.48e-04
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK06184 5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKA 35
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
19-48 |
3.55e-04 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 41.77 E-value: 3.55e-04
10 20 30
....*....|....*....|....*....|
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGVDVTVLEK 37
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
8-49 |
3.72e-04 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 42.22 E-value: 3.72e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 490182119 8 SLKKKEIK-DKYDIVVVGGGPAGLTSAIYARR--AGLSVLVVEKA 49
Cdd:PRK06854 1 AMANPEVVeVDTDILIIGGGMAGCGAAFEAKEwaPDLKVLIVEKA 45
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
17-49 |
4.04e-04 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 41.96 E-value: 4.04e-04
10 20 30
....*....|....*....|....*....|....*
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRA--GLSVLVVEKA 49
Cdd:PRK08275 9 ETDILVIGGGTAGPMAAIKAKERnpALRVLLLEKA 43
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
18-127 |
4.15e-04 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 41.54 E-value: 4.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVE-----KAIEGGYVNLTHLV----------------------------ENY 64
Cdd:PRK07364 19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEaqpaeAAAAKGQAYALSLLsarifegigvwekilpqigkfrqirlsdADY 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 65 PGFPAISGEELASKF----KEHA------EKFGADIYN------AEVVKLEVQGDKKVVELD-DGKR--IEAPVVIVATG 125
Cdd:PRK07364 99 PGVVKFQPTDLGTEAlgyvGEHQvllealQEFLQSCPNitwlcpAEVVSVEYQQDAATVTLEiEGKQqtLQSKLVVAADG 178
|
..
gi 490182119 126 AN 127
Cdd:PRK07364 179 AR 180
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
271-313 |
4.41e-04 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 41.96 E-value: 4.41e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 490182119 271 VITDENMETSVKGIYAVGDVRKKNLRQIVTAVADGAIAVEHAA 313
Cdd:PRK08275 359 VWVNEKAETTVPGLYAAGDMASVPHNYMLGAFTYGWFAGENAA 401
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
20-53 |
6.63e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 41.03 E-value: 6.63e-04
10 20 30
....*....|....*....|....*....|....
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGG 53
Cdd:PRK07233 2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLG 35
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
19-53 |
6.65e-04 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 40.53 E-value: 6.65e-04
10 20 30
....*....|....*....|....*....|....*.
gi 490182119 19 DIVVVGGGPAGLTSAIY-ARRAGLSVLVVEKAIEGG 53
Cdd:pfam01946 19 DVVIVGAGSSGLTAAYYlAKNRGLKVAIIERSVSPG 54
|
|
| PRK12835 |
PRK12835 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
18-53 |
6.73e-04 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 237221 [Multi-domain] Cd Length: 584 Bit Score: 41.33 E-value: 6.73e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVVEK--------AIEGG 53
Cdd:PRK12835 12 VDVLVVGSGGGGMTAALTAAARGLDTLVVEKsahfggstALSGG 55
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
17-49 |
6.83e-04 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 41.25 E-value: 6.83e-04
10 20 30
....*....|....*....|....*....|...
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAGlSVLVVEKA 49
Cdd:COG0029 4 KTDVLVIGSGIAGLSAALKLAERG-RVTLLTKG 35
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
16-48 |
6.97e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 41.03 E-value: 6.97e-04
10 20 30
....*....|....*....|....*....|...
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEK 48
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEA 35
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
20-128 |
7.48e-04 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 40.67 E-value: 7.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 20 IVVVGGGPAGLTSAIYARRAGLSVLVVEKAieggyvnlTHLVenypgfPAISGEELASKFKEHAEKFGADI-YNAEVVKL 98
Cdd:PRK04965 144 VLVVGGGLIGTELAMDLCRAGKAVTLVDNA--------ASLL------ASLMPPEVSSRLQHRLTEMGVHLlLKSQLQGL 209
|
90 100 110
....*....|....*....|....*....|
gi 490182119 99 EVQGDKKVVELDDGKRIEAPVVIVATGANP 128
Cdd:PRK04965 210 EKTDSGIRATLDSGRSIEVDAVIAAAGLRP 239
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
16-129 |
1.02e-03 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 40.52 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 16 DKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKAIEGGYVN----------LTH----LVENYPGFPAISGEELASkFK- 80
Cdd:PRK08849 2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIEGGEPKAFEPsqpmdirvsaISQtsvdLLESLGAWSSIVAMRVCP-YKr 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490182119 81 ----EHAE---KFGADIYNAE--------------------------------VVKLEVQGDKKVVELDDGKRIEAPVVI 121
Cdd:PRK08849 81 letwEHPEcrtRFHSDELNLDqlgyivenrliqlglwqqfaqypnltlmcpekLADLEFSAEGNRVTLESGAEIEAKWVI 160
|
....*...
gi 490182119 122 VATGANPK 129
Cdd:PRK08849 161 GADGANSQ 168
|
|
| PRK07190 |
PRK07190 |
FAD-binding protein; |
19-49 |
1.55e-03 |
|
FAD-binding protein;
Pssm-ID: 235955 [Multi-domain] Cd Length: 487 Bit Score: 40.18 E-value: 1.55e-03
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK07190 7 DVVIIGAGPVGLMCAYLGQLCGLNTVIVDKS 37
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
16-47 |
1.79e-03 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 39.81 E-value: 1.79e-03
10 20 30
....*....|....*....|....*....|....*.
gi 490182119 16 DKYDIVVVGGGPAGltsAIYARR----AGLSVLVVE 47
Cdd:COG2303 3 EEYDYVIVGAGSAG---CVLANRlsedAGLRVLLLE 35
|
|
| Trp_halogenase |
pfam04820 |
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ... |
19-49 |
1.98e-03 |
|
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.
Pssm-ID: 398475 [Multi-domain] Cd Length: 457 Bit Score: 39.62 E-value: 1.98e-03
10 20 30
....*....|....*....|....*....|....
gi 490182119 19 DIVVVGGGPAGLTSAIYARRA---GLSVLVVEKA 49
Cdd:pfam04820 1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESE 34
|
|
| PRK05257 |
PRK05257 |
malate:quinone oxidoreductase; Validated |
187-251 |
2.47e-03 |
|
malate:quinone oxidoreductase; Validated
Pssm-ID: 179979 Cd Length: 494 Bit Score: 39.35 E-value: 2.47e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490182119 187 QLLETLTAakvlqervlnNPKIEVIYNSTVREI-RGKDKVEEVVIENVKTGETKVLKADgvFIFIG 251
Cdd:PRK05257 188 QLVGYLQK----------QGNFELQLGHEVRDIkRNDDGSWTVTVKDLKTGEKRTVRAK--FVFIG 241
|
|
| Mqo |
pfam06039 |
Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone ... |
204-251 |
3.15e-03 |
|
Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.
Pssm-ID: 461809 Cd Length: 488 Bit Score: 38.96 E-value: 3.15e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 490182119 204 NNPKIEVIYNSTVREI-RGKDKVEEVVIENVKTGETKVLKADgvFIFIG 251
Cdd:pfam06039 191 KQPGVELHYGHEVTDLkRNSDGRWRVKVKDLNTGEKRTVRAK--FVFIG 237
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
19-49 |
3.17e-03 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 39.07 E-value: 3.17e-03
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:COG3349 5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEAR 35
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
19-45 |
4.18e-03 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 38.81 E-value: 4.18e-03
10 20
....*....|....*....|....*..
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLV 45
Cdd:PRK08626 7 DALVIGAGLAGLRVAIAAAQRGLDTIV 33
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
17-48 |
5.02e-03 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 38.50 E-value: 5.02e-03
10 20 30
....*....|....*....|....*....|....*
gi 490182119 17 KYDIVVVGGGPAGLTSAIYARRAG---LSVLVVEK 48
Cdd:PRK06069 5 KYDVVIVGSGLAGLRAAVAAAERSggkLSVAVVSK 39
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
19-49 |
5.81e-03 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 38.29 E-value: 5.81e-03
10 20 30
....*....|....*....|....*....|.
gi 490182119 19 DIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK13800 15 DVLVIGGGTAGTMAALTAAEHGANVLLLEKA 45
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
16-49 |
7.39e-03 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 37.93 E-value: 7.39e-03
10 20 30
....*....|....*....|....*....|....*
gi 490182119 16 DKYDIVVVGGGPAGLTSAI-YARRaGLSVLVVEKA 49
Cdd:PRK08132 22 ARHPVVVVGAGPVGLALAIdLAQQ-GVPVVLLDDD 55
|
|
| glycerol3P_GlpB |
TIGR03378 |
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ... |
18-46 |
8.47e-03 |
|
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]
Pssm-ID: 213807 Cd Length: 419 Bit Score: 37.69 E-value: 8.47e-03
10 20
....*....|....*....|....*....
gi 490182119 18 YDIVVVGGGPAGLTSAIYARRAGLSVLVV 46
Cdd:TIGR03378 1 FDVIIIGGGLAGLSCALRLAEAGKKCAII 29
|
|
| ubiF |
PRK08020 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed |
13-49 |
8.65e-03 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Pssm-ID: 181199 [Multi-domain] Cd Length: 391 Bit Score: 37.66 E-value: 8.65e-03
10 20 30
....*....|....*....|....*....|....*..
gi 490182119 13 EIKDKYDIVVVGGGPAGLTSAIYARRAGLSVLVVEKA 49
Cdd:PRK08020 1 MTNQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHA 37
|
|
| |
