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Conserved domains on  [gi|489319370|ref|WP_003226714|]
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MULTISPECIES: sporulation protein YabP [Bacillus]

Protein Classification

spore_yabP family protein( domain architecture ID 10021567)

spore_yabP family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YabP COG5868
Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];
17-100 8.00e-42

Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444570  Cd Length: 94  Bit Score: 132.23  E-value: 8.00e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489319370  17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQ-QGDKAKGFF 95
Cdd:COG5868   10 HNLTLENRKRLTITGVKDVESFDEEEILLETELGLLTIKGENLHIKKLNLEKGEVSIEGEIDSLEYSDEKsQGEKGKGLL 89


                 ....*
gi 489319370  96 SKLFK 100
Cdd:COG5868   90 SRLFK 94
 
Name Accession Description Interval E-value
YabP COG5868
Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];
17-100 8.00e-42

Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444570  Cd Length: 94  Bit Score: 132.23  E-value: 8.00e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489319370  17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQ-QGDKAKGFF 95
Cdd:COG5868   10 HNLTLENRKRLTITGVKDVESFDEEEILLETELGLLTIKGENLHIKKLNLEKGEVSIEGEIDSLEYSDEKsQGEKGKGLL 89


                 ....*
gi 489319370  96 SKLFK 100
Cdd:COG5868   90 SRLFK 94
spore_yabP TIGR02892
sporulation protein YabP; Members of this protein family are the YabP protein of the bacterial ...
 17-100 9.24e-34

sporulation protein YabP; Members of this protein family are the YabP protein of the bacterial sporulation program, as found in Bacillus subtilis, Clostridium tetani, and other spore-forming members of the Firmicutes. In Bacillus subtilis, a yabP single mutant appears to sporulate and germinate normally (), but is in an operon with yabQ (essential for formation of the spore cortex), it near-universal among endospore-forming bacteria, and is found nowhere else. It is likely, therefore, that YabP does have a function in sporulation or germination, one that is either unappreciated or partially redundant with that of another protein. [Cellular processes, Sporulation and germination]


Pssm-ID: 274341  Cd Length: 85  Bit Score: 111.64  E-value: 9.24e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489319370   17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYL-DEQQGDKAKGFF 95
Cdd:TIGR02892   1 HSVSIENRKRLSITGVKEVISFDDEEILLETVMGFLTIKGQELKMNKLDVENGQVIIKGFISELTYSeGNGSKEKGKGFF 80


                  ....*
gi 489319370   96 SKLFK 100
Cdd:TIGR02892  81 SRLFR 85
YabP pfam07873
YabP family; This family of proteins is involved in spore coat assembly during the process of ...
 17-82 1.02e-20

YabP family; This family of proteins is involved in spore coat assembly during the process of sporulation.


Pssm-ID: 462297  Cd Length: 64  Bit Score: 77.79  E-value: 1.02e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489319370   17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDveKGIVSIKGRVFDLVY 82
Cdd:pfam07873   1 HKITLTGRRELTIEGVKGVLSFDEEEIRLETKLGILTIKGENLHIKYLT--KGELKIEGKIDSLEY 64
 
Name Accession Description Interval E-value
YabP COG5868
Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];
17-100 8.00e-42

Sporulation protein YabP [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444570  Cd Length: 94  Bit Score: 132.23  E-value: 8.00e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489319370  17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQ-QGDKAKGFF 95
Cdd:COG5868   10 HNLTLENRKRLTITGVKDVESFDEEEILLETELGLLTIKGENLHIKKLNLEKGEVSIEGEIDSLEYSDEKsQGEKGKGLL 89


                 ....*
gi 489319370  96 SKLFK 100
Cdd:COG5868   90 SRLFK 94
spore_yabP TIGR02892
sporulation protein YabP; Members of this protein family are the YabP protein of the bacterial ...
 17-100 9.24e-34

sporulation protein YabP; Members of this protein family are the YabP protein of the bacterial sporulation program, as found in Bacillus subtilis, Clostridium tetani, and other spore-forming members of the Firmicutes. In Bacillus subtilis, a yabP single mutant appears to sporulate and germinate normally (), but is in an operon with yabQ (essential for formation of the spore cortex), it near-universal among endospore-forming bacteria, and is found nowhere else. It is likely, therefore, that YabP does have a function in sporulation or germination, one that is either unappreciated or partially redundant with that of another protein. [Cellular processes, Sporulation and germination]


Pssm-ID: 274341  Cd Length: 85  Bit Score: 111.64  E-value: 9.24e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489319370   17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYL-DEQQGDKAKGFF 95
Cdd:TIGR02892   1 HSVSIENRKRLSITGVKEVISFDDEEILLETVMGFLTIKGQELKMNKLDVENGQVIIKGFISELTYSeGNGSKEKGKGFF 80


                  ....*
gi 489319370   96 SKLFK 100
Cdd:TIGR02892  81 SRLFR 85
YabP pfam07873
YabP family; This family of proteins is involved in spore coat assembly during the process of ...
 17-82 1.02e-20

YabP family; This family of proteins is involved in spore coat assembly during the process of sporulation.


Pssm-ID: 462297  Cd Length: 64  Bit Score: 77.79  E-value: 1.02e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489319370   17 HDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDveKGIVSIKGRVFDLVY 82
Cdd:pfam07873   1 HKITLTGRRELTIEGVKGVLSFDEEEIRLETKLGILTIKGENLHIKYLT--KGELKIEGKIDSLEY 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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