NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|489000212|ref|WP_002910874|]
View 

MULTISPECIES: DUF6287 domain-containing protein [Streptococcus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF6287 pfam19804
Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally ...
 90-121 7.72e-08

Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally uncharacterized. It is around 50 amino acids in length and contains a conserved GTW sequence motif.


:

Pssm-ID: 466195  Cd Length: 34  Bit Score: 46.77  E-value: 7.72e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 489000212   90 MDISALANGNYTSVKGTWQDASGNQLVFDEKG 121
Cdd:pfam19804   3 MDLAAILNGDFSSLAGTWQNDNGETLTINPDG 34
 
Name Accession Description Interval E-value
DUF6287 pfam19804
Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally ...
 90-121 7.72e-08

Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally uncharacterized. It is around 50 amino acids in length and contains a conserved GTW sequence motif.


Pssm-ID: 466195  Cd Length: 34  Bit Score: 46.77  E-value: 7.72e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 489000212   90 MDISALANGNYTSVKGTWQDASGNQLVFDEKG 121
Cdd:pfam19804   3 MDLAAILNGDFSSLAGTWQNDNGETLTINPDG 34
 
Name Accession Description Interval E-value
DUF6287 pfam19804
Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally ...
 90-121 7.72e-08

Domain of unknown function (DUF6287); This presumed domain, found in bacteria, is functionally uncharacterized. It is around 50 amino acids in length and contains a conserved GTW sequence motif.


Pssm-ID: 466195  Cd Length: 34  Bit Score: 46.77  E-value: 7.72e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 489000212   90 MDISALANGNYTSVKGTWQDASGNQLVFDEKG 121
Cdd:pfam19804   3 MDLAAILNGDFSSLAGTWQNDNGETLTINPDG 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH