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MULTISPECIES: 30S ribosomal protein S18 [Gammaproteobacteria]
30S ribosomal protein S18( domain architecture ID 10000799)
30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
RpsR | COG0238 | Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 ... |
3-75 | 1.96e-38 | ||
Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 is part of the Pathway/BioSystem: Ribosome 30S subunit : Pssm-ID: 440008 Cd Length: 81 Bit Score: 122.18 E-value: 1.96e-38
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Name | Accession | Description | Interval | E-value | ||
RpsR | COG0238 | Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 ... |
3-75 | 1.96e-38 | ||
Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 is part of the Pathway/BioSystem: Ribosome 30S subunit Pssm-ID: 440008 Cd Length: 81 Bit Score: 122.18 E-value: 1.96e-38
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S18 | TIGR00165 | ribosomal protein S18; This ribosomal small subunit protein is found in all eubacteria so far, ... |
4-73 | 7.36e-32 | ||
ribosomal protein S18; This ribosomal small subunit protein is found in all eubacteria so far, as well as in chloroplasts. YER050C from Saccharomyces cerevisiae and a related protein from Caenorhabditis elegans appear to be homologous and may represent mitochondrial forms. The trusted cutoff is set high enough that these two candidate S18 proteins are not categorized automatically. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 272937 Cd Length: 70 Bit Score: 105.20 E-value: 7.36e-32
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Ribosomal_S18 | pfam01084 | Ribosomal protein S18; |
17-68 | 2.73e-23 | ||
Ribosomal protein S18; Pssm-ID: 460054 Cd Length: 52 Bit Score: 82.80 E-value: 2.73e-23
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rps18 | CHL00077 | ribosomal protein S18 |
21-70 | 3.95e-16 | ||
ribosomal protein S18 Pssm-ID: 177016 [Multi-domain] Cd Length: 86 Bit Score: 65.76 E-value: 3.95e-16
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Name | Accession | Description | Interval | E-value | ||
RpsR | COG0238 | Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 ... |
3-75 | 1.96e-38 | ||
Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S18 is part of the Pathway/BioSystem: Ribosome 30S subunit Pssm-ID: 440008 Cd Length: 81 Bit Score: 122.18 E-value: 1.96e-38
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S18 | TIGR00165 | ribosomal protein S18; This ribosomal small subunit protein is found in all eubacteria so far, ... |
4-73 | 7.36e-32 | ||
ribosomal protein S18; This ribosomal small subunit protein is found in all eubacteria so far, as well as in chloroplasts. YER050C from Saccharomyces cerevisiae and a related protein from Caenorhabditis elegans appear to be homologous and may represent mitochondrial forms. The trusted cutoff is set high enough that these two candidate S18 proteins are not categorized automatically. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 272937 Cd Length: 70 Bit Score: 105.20 E-value: 7.36e-32
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Ribosomal_S18 | pfam01084 | Ribosomal protein S18; |
17-68 | 2.73e-23 | ||
Ribosomal protein S18; Pssm-ID: 460054 Cd Length: 52 Bit Score: 82.80 E-value: 2.73e-23
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rps18 | CHL00077 | ribosomal protein S18 |
21-70 | 3.95e-16 | ||
ribosomal protein S18 Pssm-ID: 177016 [Multi-domain] Cd Length: 86 Bit Score: 65.76 E-value: 3.95e-16
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Blast search parameters | ||||
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