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Conserved domains on  [gi|446043010|ref|WP_000120865|]
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MULTISPECIES: molecular chaperone [Acinetobacter]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
12-247 2.96e-80

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 240.66  E-value: 2.96e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVE 91
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRITALPNasQFNQKQETVLWLNVLDIPPRPTSKNadttPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQW 171
Cdd:COG3121   86 PGKSQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEE----GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 172 VKSGQNLTVKNPTPFHITMTSVyqKVGDKKVDLLPQGLMVKPFSEASIQLKNSNLQ----DMSFINVNDYGGRVEHQIKL 247
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDL--SLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLaaggKVTWATINDYGGAVPLEATL 237
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
12-247 2.96e-80

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 240.66  E-value: 2.96e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVE 91
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRITALPNasQFNQKQETVLWLNVLDIPPRPTSKNadttPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQW 171
Cdd:COG3121   86 PGKSQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEE----GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 172 VKSGQNLTVKNPTPFHITMTSVyqKVGDKKVDLLPQGLMVKPFSEASIQLKNSNLQ----DMSFINVNDYGGRVEHQIKL 247
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDL--SLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLaaggKVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
12-247 1.29e-68

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 211.50  E-value: 1.29e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVA-APAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRV 90
Cdd:PRK09926   7 HTTALCFATCMAfSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRITALpNASQFNQKQETVLWLNVLDIPPRPTSKNADTtpDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQ 170
Cdd:PRK09926  87 DPKRGQTIKLMYT-ASTALPKDRESVFWFNVLEVPPKPDAEKVAN--QSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALK 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 171 W-VKSGQN---LTVKNPTPFHITMTSVYQKVGDKKVDLlpQGLMVKPFSEASIQLKNSNLQDMS----FINVNDYGGRVE 242
Cdd:PRK09926 164 WsWAGSEGkasLRVTNPTPYYVSFSSGDLEAGGKRYPV--DSKMIAPFSDESMKVKGLSGKASSgkvhFYAINDFGGAIE 241


                 ....*
gi 446043010 243 HQIKL 247
Cdd:PRK09926 242 GNASL 246
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 31-159 4.35e-48

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 155.05  E-value: 4.35e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010   31 IVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVEATKSQTLRItaLPNASQFN 110
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI--YTTGPPLP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 446043010  111 QKQETVLWLNVLDIPPRPTSKNAdttpDNFLQLAIRSRIKFFYRPASIK 159
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKGG----QNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
12-247 2.96e-80

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 240.66  E-value: 2.96e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVE 91
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRITALPNasQFNQKQETVLWLNVLDIPPRPTSKNadttPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQW 171
Cdd:COG3121   86 PGKSQTVRIIRTGP--PLPQDRESLFRLNVDEIPPKDASEE----GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTW 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 172 VKSGQNLTVKNPTPFHITMTSVyqKVGDKKVDLLPQGLMVKPFSEASIQLKNSNLQ----DMSFINVNDYGGRVEHQIKL 247
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDL--SLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLaaggKVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
12-247 1.29e-68

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 211.50  E-value: 1.29e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVA-APAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRV 90
Cdd:PRK09926   7 HTTALCFATCMAfSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRITALpNASQFNQKQETVLWLNVLDIPPRPTSKNADTtpDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQ 170
Cdd:PRK09926  87 DPKRGQTIKLMYT-ASTALPKDRESVFWFNVLEVPPKPDAEKVAN--QSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALK 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 171 W-VKSGQN---LTVKNPTPFHITMTSVYQKVGDKKVDLlpQGLMVKPFSEASIQLKNSNLQDMS----FINVNDYGGRVE 242
Cdd:PRK09926 164 WsWAGSEGkasLRVTNPTPYYVSFSSGDLEAGGKRYPV--DSKMIAPFSDESMKVKGLSGKASSgkvhFYAINDFGGAIE 241


                 ....*
gi 446043010 243 HQIKL 247
Cdd:PRK09926 242 GNASL 246
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 31-159 4.35e-48

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 155.05  E-value: 4.35e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010   31 IVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVEATKSQTLRItaLPNASQFN 110
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI--YTTGPPLP 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 446043010  111 QKQETVLWLNVLDIPPRPTSKNAdttpDNFLQLAIRSRIKFFYRPASIK 159
Cdd:pfam00345  79 TDRESLFWLNVLEIPPKDKPKGG----QNGLQLALRSRIKLFYRPAGLA 123
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 20-248 4.49e-47

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 156.36  E-value: 4.49e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  20 SSVAAPAaQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVEATKSQTLR 99
Cdd:PRK15253  25 SAIILPA-HAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAESGQQIK 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 100 ITALPNASQFNqkQETVLWLNVLDIPPrptsKNADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLT 179
Cdd:PRK15253 104 IKKMPNSLPDN--KESLFYLNVLDIPP----NSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVI 177

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446043010 180 VKNPTPFHITMTSVyqKVGDKKVDllPQGLMVKPFSEASIQLKNSNLQDMSFINVNDYGGRVEHQIKLQ 248
Cdd:PRK15253 178 MKNDTANWITVTDV--KAGNTKIN--DQTIMLPPLSTQNINMKYASTSQYEVTIIDDNGNYISSKINVK 242
lfpB PRK15290
fimbrial chaperone;
25-238 9.14e-44

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 147.83  E-value: 9.14e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  25 PAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSK-PALVQAWIDegdPKSTPDQSKVPFMIAPPISRVEATKSQTLRITAL 103
Cdd:PRK15290  33 ALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVD---PFNKEDKSKAPFTVIPPVSRLEPSQEKVLRIIHT 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 104 PNASqFNQKQETVLWLNVLDIPPrpTSKNADTtpdNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNP 183
Cdd:PRK15290 110 KGVS-LPDDRESVFWLNIKNIPP--SASNKAT---NSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRNLIAENP 183

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446043010 184 TPFHITMTSVyqKVGDKKVDLlpqgLMVKPFSEASIQL-KNSNLQDMSFINVNDYG 238
Cdd:PRK15290 184 NPIHISVMDV--IVDGHDVPL----NMIRPFETLTLPLpANSAGGQMTWRFINDYG 233
PRK15218 PRK15218
fimbrial assembly chaperone;
16-219 6.17e-40

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 137.42  E-value: 6.17e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  16 LAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVEATKS 95
Cdd:PRK15218   5 IALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  96 QTLRITALPNasQFNQKQETVLWLNVLDIPPrptskNADTTPD-NFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKS 174
Cdd:PRK15218  85 QQLKIKKLAN--NLPGDRESLFYLNVLDIPP-----NSDENKDkNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRA 157

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 446043010 175 GQNLTVKNPTPFHITMTSVyqkVGDKKVDllPQGLMVKPFSEASI 219
Cdd:PRK15218 158 PGSISVKNNSANWITIPEI---KAKSKVN--KETLLLAPWSSQSI 197
PRK15249 PRK15249
fimbrial chaperone;
12-247 5.81e-37

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 130.69  E-value: 5.81e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSK-VPFMIAPPISRV 90
Cdd:PRK15249  11 YYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSaMPFIATPPVFRI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRITaLPNASQFNQKQETVLWLNVLDIPPrptSKNADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAAdKLQ 170
Cdd:PRK15249  91 QPKAGQVVRVI-YNNTKKLPQDRESVFWFNVLQVPP---TNIGSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNLAK-KLQ 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 171 -----WVKSGQNLTVKNPTPFHITMTSVYQKVGDKKVDLlpQGLMVKPFSEASIQL-----KNSNLQDMSFINVNDYGGR 240
Cdd:PRK15249 166 iktvnKGSGKSGIVIVNPQPWFASLSNLNVKVNGASYNL--DADMIAPFSSQTWWLpgkrsLKSFSGTVTVTLVNDQGAR 243


                 ....*..
gi 446043010 241 VEHQIKL 247
Cdd:PRK15249 244 ISESYDV 250
PRK15295 PRK15295
fimbrial assembly chaperone;
12-242 1.61e-35

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 126.21  E-value: 1.61e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAapaaQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTpdqSKVPFMIAPPISRVE 91
Cdd:PRK15295   6 SVLVVLLTSHVA----HASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVT---NKQAFIITPPLFRLD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRItaLPNASQFNQKQETVLWLNVLDIPprptskNADTTPD-NFLQLAIRSRIKFFYRPASIKEDANLA-ADKL 169
Cdd:PRK15295  79 AGQKNSIRV--IRSGAPLPADRESMYWLNIKGIP------SIDDNASaNRVEISINTQIKLIYRPPALTKSTPDSqSQQL 150

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446043010 170 QWVKSGQNLTVKNPTPFHITMTSVyqKVGDKKVDllpQGLMVKPFSEASIQLKN--SNLQDMSFINVNDYGGRVE 242
Cdd:PRK15295 151 KWQTAGDVITVNNPTPYYMNFASV--TLNSHEVK---SATFVPPKSSASFKLGStaAPHGTVTWRLISDYGMSLE 220
PRK15195 PRK15195
molecular chaperone FimC;
12-238 4.55e-34

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 122.28  E-value: 4.55e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAeIVIHGTRVIYPSDAREVTLQVSNNGSKPA-LVQAWIDegdpkSTPDQSKVPFMIAPPISRV 90
Cdd:PRK15195   9 MIIIFYLIISASVHAAGG-IALGATRVIYPADAKQTSLAIRNSHTNERyLVNSWIE-----NSSGVKEKSFIVTPPLFVS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRI--TALPNASQfnqkQETVLWLNVLDIPprpTSKNADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADK 168
Cdd:PRK15195  83 EPKSENTLRIiyAGPPLAAD----RESLFWMNVKAIP---SVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDT 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 169 LQWVKSGQNLTVKNPTPFHITMTSVyqKVGDKKVDllpqGLMVKPFSEASIQLKNSNLQDMSFINVNDYG 238
Cdd:PRK15195 156 LKFSRSGNHLKVHNPSPYYVTLVNL--QVGSQKLG----NAMIAPKVNSQIPLPSGVQGKLKFQTVNDYG 219
PRK15211 PRK15211
fimbrial chaperone;
12-246 2.29e-33

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 120.70  E-value: 2.29e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAqaeIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKStpdqSKVPFMIAPPISRVE 91
Cdd:PRK15211   8 LVSLLSLAVCGQAMAA---FVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQGS----STVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRI----TALPnasqfnQKQETVLWLNVLDIPPRPTSKNAdttpdNFLQLAIRSRIKFFYRPASIKEDANLAAD 167
Cdd:PRK15211  81 PKEKQIIRImktdSALP------KDRESLFWLNVQEIPPKPKASEG-----NVLAVALNTQVKLIYRPKALKEGRENAEK 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 168 KLQWVKSGQNLTVKNPTPFHITMTSVYQ-----KVGD---KKVDLLPqglmvkPFSEASIQLKNSNlQDMSFINVNDYGG 239
Cdd:PRK15211 150 NLQIIHRGGETYLKNPTPYYFAVTGVKLngqpvKLSDrvmNEIAQLA------PFSEVSLGKLSLN-GTVTVQAVNDWGG 222


                 ....*..
gi 446043010 240 RVEHQIK 246
Cdd:PRK15211 223 TQDYTLK 229
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 26-239 2.68e-33

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 120.27  E-value: 2.68e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  26 AAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEgdPKSTPDQSKVPFMIAPPISRVEATKSQTLRItaLPN 105
Cdd:PRK15299  19 AHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRLNGGQKNVLRI--IRT 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 106 ASQFNQKQETVLWLNVLDIPprptSKNADTTpDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNPTP 185
Cdd:PRK15299  95 GGNLPEDRESLYWLDIKSIP----SSNPDNK-HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTP 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446043010 186 FHITMTSVyqKVGDKKVDlLPQglMVKPFSEASIQLKNSNLQDMSFINVNDYGG 239
Cdd:PRK15299 170 YYMNFATL--SVGSQKVK-APR--YVAPFGNAQYTLPAAASGPIAWSIINDFGG 218
PRK15246 PRK15246
fimbrial assembly chaperone;
25-224 6.87e-33

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 119.29  E-value: 6.87e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  25 PAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVPFMIAPPISRVEATKSQTLRITaLP 104
Cdd:PRK15246   6 GPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLL-LS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 105 NASQFNQKQETVLWLNVLDIPP-RPTSKNADTTpdnfLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNP 183
Cdd:PRK15246  85 SRQQLATDRESLFWLNIYQIPPvTQDIKNHPRK----LVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNP 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446043010 184 TPFHITMTSVYqkvgDKKVDLlpQGLMVKPFSEASIQLKNS 224
Cdd:PRK15246 161 TSWYMSLTLTM----DNKKSI--GDIMVAPKTALDVPLTRS 195
PRK15208 PRK15208
molecular chaperone LpfB;
17-238 1.90e-32

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 118.09  E-value: 1.90e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  17 AFASSVAapaaqaeivIHGTRVIYPSDAREVTLQVSN-NGSKPALVQAWIDEGDpkstpDQSKVPFMIAPPISRVEATKS 95
Cdd:PRK15208  18 SFAGGVA---------LSSTRVIYDGSKKEASLTVNNkSKTEEFLIQSWIDDAN-----GNKKTPFIITPPLFKLDPTKN 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  96 QTLRITALPNAsqFNQKQETVLWLNVLDIPprptSKNADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSG 175
Cdd:PRK15208  84 NVLRIVNITNT--LPQDRESVYWINVKAIP----AKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAG 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446043010 176 QNLTVKNPTPFHITMTSVYqkVGDKKVDllpQGLMVKPFSEASIQLK--NSNLQDMSFINVNDYG 238
Cdd:PRK15208 158 NQIKVENPSAFNLTFNQFY--ANGRDIE---KAGMVPAKGSLNIELPagTGKVSEVKYNIINDFG 217
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 22-239 3.51e-26

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 102.55  E-value: 3.51e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  22 VAAP-AAQAEIVIHGTRVIYPSDAREVTLQVSN-NGSKPALVQAWIDegDPKSTPDQSKvpFMIAPPISRVEATKSQTLR 99
Cdd:PRK15274  18 LAAPlVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLE--DDKFAKDTRY--FTALPPLQRIEPKSDGQVK 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 100 ITALPNASQFNQKQETVLWLNVLDIPPRPTSKNAdttpdnfLQLAIRSRIKFFYRPASIKEDANLA---ADKLQWVKSGQ 176
Cdd:PRK15274  94 VQPLPAAASLPQDRESLFYFNVREIPPKSDKPNT-------LQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLTYQGD 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446043010 177 NLTVKNPTPFHITMTSVYQKVGDKKVDLlpQGLMVKPFSEASIQLKNSNLQDMSFIN-VNDYGG 239
Cdd:PRK15274 167 GVIFDNPTPFYLVISNAGSKENETASGF--KNLLIAPREKVTSPIKGASLGSSPVVGyVDDYGG 228
PRK15224 PRK15224
pili assembly chaperone PapD;
35-239 6.83e-26

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 101.36  E-value: 6.83e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  35 GTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDpKSTPdqskVPFMIAPPISRVEATKSQTLRItaLPNASQFNQKQE 114
Cdd:PRK15224  34 ATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAAD-KSSP----APFLVMPPLFRLEANQQSQLRI--VRTGGDMPTDRE 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 115 TVLWLNVLDIPPR--PTSKNAD-TTPDnfLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNPTPFHITMT 191
Cdd:PRK15224 107 TLQWVCIKAVPPEnePSDTQAKgATLD--LNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLA 184

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446043010 192 SVyqKVGDKKVDLLPqglMVKPFSEASIQLKNSNLQDMSFINVNDYGG 239
Cdd:PRK15224 185 SV--TVGGKPITGLE---YIPPFADKTLNMPGSAHGDIEWRVITDFGG 227
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 13-239 3.03e-25

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 99.46  E-value: 3.03e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  13 LLGLAFASSVAAPAAqaeIVIHGTRVIYPSDAREVTLQVSNNG-SKPALVQAWIDEGDPKSTPdqskvPFMIAPPISRVE 91
Cdd:PRK15254   3 LLALAAAWSQYSPAA---VNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTD-----ALMALPPLQRID 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRITALPNAS-QFNQKQETVLWLNVLDIPPRptsknadTTPDNFLQLAIRSRIKFFYRP-ASIKEDANLAADKL 169
Cdd:PRK15254  75 AGQKSQVRITQVRGLTdKLPQDRETLFWFNVRGVPPK-------PEDDNVLQLAMQSQLKLFYRPkAIIRSSSDQPERKL 147

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446043010 170 QWVKSGQNLTVKNPTPFHITMTSVYQKvGDKKVDLLPQGLMVKPFseASIQLKN---SNLQDMSFINVNDYGG 239
Cdd:PRK15254 148 TAERNAGHLTLRNPTPYYITVAWLGAD-RSHRLSGFREGVMVPPL--GSLPLKAvlpAETRTLWVGYIDDYGG 217
PRK15285 PRK15285
fimbrial chaperone StfD;
26-241 2.13e-22

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 92.15  E-value: 2.13e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  26 AAQAEIVIHGTRVIYPSDAREVTLQVSNNGSK-PALVQAWI-DEGDPKSTPdqskvPFMIAPPISRVEATKSQTLRITAL 103
Cdd:PRK15285  22 SAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVeDEKGVKITS-----PLIVVPPVQRIEPSAIGQVKIQGM 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 104 PNASQFNQKQETVLWLNVLDIPPRPTSKNAdttpdnfLQLAIRSRIKFFYRPASI-KEDANLAAD-KLQWVKSGQNLTVK 181
Cdd:PRK15285  97 PALASLPQDRETLFYYNVREIPPQSDKPNT-------LQIALQTRIKVFYRPQALsKIDMQHPWQyKITLQRQGNGYQVS 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446043010 182 NPTPFHITMTSVYQKV-GDKKVDLLPqgLMVKPFSEASIQLKNSNLQDMSFIN-VNDYGGRV 241
Cdd:PRK15285 170 NPTGYYVVLSNASNRMdGTPARGFSP--LVIAPKSNVTLGGDASELGHSPVLTyVNDYGARL 229
PRK15233 PRK15233
fimbrial chaperone SefB;
36-241 5.80e-22

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 90.94  E-value: 5.80e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  36 TRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDpkstpDQSKVPFMIAPPISRVEATKSQTLRItaLPNASQFNQKQET 115
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDD-----KSSKAPFIVTPPILKVESNARTRLKV--IPTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 116 VLWLNVLDIPP----RPTSKNADTTPDNfLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNPTPFHITMT 191
Cdd:PRK15233 120 LYWLCVKGVPPlndnESNNKNNITTNLN-VNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIA 198

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 446043010 192 SVyqKVGDKKVDlLPQGlMVKPFSEAsiQLKNSNLQDMSFINVNDYGGRV 241
Cdd:PRK15233 199 NI--KSGNLSFN-IPNG-YIEPFGYA--QLPGGVHSKITLTILDDNGAEI 242
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 13-239 3.62e-18

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 80.58  E-value: 3.62e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  13 LLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNG-SKPALVQAWIDEGDPKSTPDqskvpFMIAPPISRVE 91
Cdd:PRK15188  11 LLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANADGSRSTD-----FIITPPLFVIQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  92 ATKSQTLRITALpnASQFNQKQETVLWLNVLDIPprptSKNADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQW 171
Cdd:PRK15188  86 PKKENILRIMYV--GPSLPTDRESVFYLNSKAIP----SVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRC 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446043010 172 VKSGQNLTVKNPTPFHITMTSVYQkVGDKkvdlLPQgLMVKPfsEASIQLKNSNLQdMSFINVNDYGG 239
Cdd:PRK15188 160 RNERGQLTITNPSPYYVSMVELYS-AGKK----LPN-TMVPP--KGAITLPATPGQ-VSLRTVNDFGA 218
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
27-190 4.16e-17

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 77.82  E-value: 4.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  27 AQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGD--PKSTPDQSKVPFMIAPPISRVEATKSQTLRITAlp 104
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPLFMLSARQENSMRVVY-- 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010 105 NASQFNQKQETVLWLNVLDIPP-RPTSknadttpdNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNP 183
Cdd:PRK15192  98 TGAPLPADRESLFTLSIAAIPSgKPEA--------NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNP 169


                 ....*..
gi 446043010 184 TPFHITM 190
Cdd:PRK15192 170 TPYYVTL 176
PRK11385 PRK11385
fimbrial chaperone;
13-239 9.42e-16

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 74.01  E-value: 9.42e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  13 LLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKSTPDQSKVP--FMIAPPISRV 90
Cdd:PRK11385  10 LLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPapLLAAPPLILL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRITAlPNASQFNQKQETVLWLNVLDIPprptsknADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQ 170
Cdd:PRK11385  90 KPGTTGTLRLLR-TESDILPVDRETLFELSIASVP-------SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLR 161

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446043010 171 WVKSGQNLTVKNPTPFHITMTSVyqKVGDKKvdlLPQGLMVKPFSeasiQLKNSNLQ-----DMSFINVNDYGG 239
Cdd:PRK11385 162 WTRNSQGVQLTNPTPYYINLIQV--SVNGKA---LSNAGVVPPKS----QRQTSWCQaiapcHVAWRAINDYGG 226
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 12-211 3.19e-15

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 72.38  E-value: 3.19e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  12 FLLGLAFASSVAAPAAQAE-IVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEgdpksTPDQSKVPFMIAPPISRV 90
Cdd:PRK09918   6 FFLFTALVLLSSSSAVHAAgMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVD-----LPEDKSKLLLVTPPVARV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446043010  91 EATKSQTLRITaLPNASQFnqKQETVLWLNVLDIPPRPTSKNADTTPdnflqlaIRSRIKFFYRPASIKEDANlAADKLQ 170
Cdd:PRK09918  81 EPGQSQQVRFI-LKSGSPL--NTEHLLRVSFEGVPPKPGGKNKVVMP-------IRQDLPVLIQPAALPVVRD-PWKLLV 149

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 446043010 171 WVKSGQNLTVKNPTPFHITMTsvyqkvgdKKVDLLPQGLMV 211
Cdd:PRK09918 150 WSISGNNLVVSNPSPYVVRLG--------QQVILLPSGKVV 182
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 180-242 9.96e-13

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 61.51  E-value: 9.96e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446043010  180 VKNPTPFHITMTSVyqKVGDKKVDLLPQGLMVKPFSEASIQLKNSNLQD--MSFINVNDYGGRVE 242
Cdd:pfam02753   1 VKNPTPYYVTFSSL--SLGGGGKELALDPGMVAPFSSQTFAGLPAPAAGgtVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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