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Conserved domains on  [gi|2569181451|gb|WMI18646|]
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eukaryotic translation initiation factor 3 subunit B, partial [Archaeoprepona demophon]

Protein Classification

eIF2A family protein( domain architecture ID 1011892)

eIF2A family protein similar to Homo sapiens eukaryotic translation initiation factor 2A that functions in the early steps of protein synthesis of a small number of specific mRNAs

Gene Ontology:  GO:0006413|GO:0003743

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
eIF2A super family cl37576
Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation ...
 7-71 3.51e-10

Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation initiation factors.


The actual alignment was detected with superfamily member pfam08662:

Pssm-ID: 462552 [Multi-domain]  Cd Length: 194  Bit Score: 52.66  E-value: 3.51e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2569181451   7 CISFYQVNTgqapTLLKKFERTPFNHLFWSPMGQFMVLANLGLTGGALEFVDTNDFTIMNVSDHY 71
Cdd:pfam08662  84 KVSFFDLKG----NVIHSFGEQPRNTIFWSPFGRLVLLAGFGNLAGDIEFWDVVNKKKIATAEAS 144
 
Name Accession Description Interval E-value
eIF2A pfam08662
Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation ...
 7-71 3.51e-10

Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation initiation factors.


Pssm-ID: 462552 [Multi-domain]  Cd Length: 194  Bit Score: 52.66  E-value: 3.51e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2569181451   7 CISFYQVNTgqapTLLKKFERTPFNHLFWSPMGQFMVLANLGLTGGALEFVDTNDFTIMNVSDHY 71
Cdd:pfam08662  84 KVSFFDLKG----NVIHSFGEQPRNTIFWSPFGRLVLLAGFGNLAGDIEFWDVVNKKKIATAEAS 144
 
Name Accession Description Interval E-value
eIF2A pfam08662
Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation ...
 7-71 3.51e-10

Eukaryotic translation initiation factor eIF2A; This is a family of eukaryotic translation initiation factors.


Pssm-ID: 462552 [Multi-domain]  Cd Length: 194  Bit Score: 52.66  E-value: 3.51e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2569181451   7 CISFYQVNTgqapTLLKKFERTPFNHLFWSPMGQFMVLANLGLTGGALEFVDTNDFTIMNVSDHY 71
Cdd:pfam08662  84 KVSFFDLKG----NVIHSFGEQPRNTIFWSPFGRLVLLAGFGNLAGDIEFWDVVNKKKIATAEAS 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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