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Conserved domains on  [gi|2562590965|gb|WLQ25199|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Ranoidea caerulea]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009553)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-316 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214418  Cd Length: 322  Bit Score: 585.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00071    8 IINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00071   88 LIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00071  168 MNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILF 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2562590965 243 MGSSIS-TLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPM 316
Cdd:MTH00071  248 LGSTYNhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
 
Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-316 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 585.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00071    8 IINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00071   88 LIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00071  168 MNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILF 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2562590965 243 MGSSIS-TLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPM 316
Cdd:MTH00071  248 LGSTYNhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
NADHdh pfam00146
NADH dehydrogenase;
7-302 2.01e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 345.61  E-value: 2.01e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   7 LSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALAMIIW 86
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  87 TPLPMPTPL--SNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTLQN 164
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 165 FSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIFMG 244
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2562590965 245 SSISTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-302 1.29e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 319.00  E-value: 1.29e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   2 AIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALAL 81
Cdd:COG1005    11 TLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIP 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  82 AMIIWTPLPM--PTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGN 159
Cdd:COG1005    91 ALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGS 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 160 FTLQNFSITQE-PIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTIS 238
Cdd:COG1005   171 LNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALA 250

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2562590965 239 AIIFMG--------SSISTLPPLTtsLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:COG1005   251 TTLFLGgwlgpfpiLPLGGLPGIL--WFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-316 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 585.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00071    8 IINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00071   88 LIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00071  168 MNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILF 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2562590965 243 MGSSIS-TLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPM 316
Cdd:MTH00071  248 LGSTYNhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 559.61  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00134    9 IINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00134   89 LTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00134  169 QTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILF 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 243 MGSS-ISTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPMT 317
Cdd:MTH00134  249 LGAShIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 557.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00111    8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00111   88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00111  168 QTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 243 MGSSISTLPP-LTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPMT 317
Cdd:MTH00111  248 LNPSTLNLPPeLFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 3-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 505.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00104    3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00104   83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00104  163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 243 MGSSIST-LPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPMT 317
Cdd:MTH00104  243 LGAFHNPyMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-315 1.80e-155

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 437.03  E-value: 1.80e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:MTH00218    3 LSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNF 160
Cdd:MTH00218   83 LALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 161 TLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAI 240
Cdd:MTH00218  163 SLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVI 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2562590965 241 IFMGSSISTLpplttsLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPP 315
Cdd:MTH00218  243 LFLGTSLTTI------NLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-317 6.49e-153

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 431.32  E-value: 6.49e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNF 160
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 161 TLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAI 240
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2562590965 241 IFMG--SSISTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPPMT 317
Cdd:MTH00040  245 LFLGggSPFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPPNY 323
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 3-310 2.51e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 360.60  E-value: 2.51e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00195    5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00195   85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00195  165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2562590965 243 MGSSistlpplTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISF 310
Cdd:MTH00195  245 LGGG-------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 3-299 2.06e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 358.41  E-value: 2.06e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2562590965 243 MGSSiSTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLAL 299
Cdd:MTH00143  244 FGGS-SVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-297 1.18e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 348.68  E-value: 1.18e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00193    5 LINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00193   85 LLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00193  165 LDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMF 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2562590965 243 MGSSISTLpplttsLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITL 297
Cdd:MTH00193  245 LGGDLLSL------LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 293
NADHdh pfam00146
NADH dehydrogenase;
7-302 2.01e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 345.61  E-value: 2.01e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   7 LSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALAMIIW 86
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  87 TPLPMPTPL--SNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTLQN 164
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 165 FSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIFMG 244
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2562590965 245 SSISTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-306 4.39e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 337.01  E-value: 4.39e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 161 TLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAI 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 241 IFMGSSISTLPplttSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIII 306
Cdd:MTH00225  242 LFFGGFFVTID----LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 2-302 1.29e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 319.00  E-value: 1.29e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   2 AIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALAL 81
Cdd:COG1005    11 TLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIP 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  82 AMIIWTPLPM--PTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGN 159
Cdd:COG1005    91 ALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGS 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 160 FTLQNFSITQE-PIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTIS 238
Cdd:COG1005   171 LNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALA 250

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2562590965 239 AIIFMG--------SSISTLPPLTtsLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:COG1005   251 TTLFLGgwlgpfpiLPLGGLPGIL--WFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 3-315 3.91e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 312.43  E-value: 3.91e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00054    5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTP--LSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNF 160
Cdd:MTH00054   85 FIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 161 TLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAI 240
Cdd:MTH00054  165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2562590965 241 IFMGSSISTLPPLTTS----LLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHIIIPISFLFTPP 315
Cdd:MTH00054  245 LFLGGWLVISGPTSYFsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-301 1.24e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 306.28  E-value: 1.24e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:MTH00216    7 FYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFT 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMP--TPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISG 158
Cdd:MTH00216   87 LALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVG 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 159 NFTLQNFSITQEP-IWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTI 237
Cdd:MTH00216  167 SLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCL 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 238 SAIIFMGSSISTLPPLT--TSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTL 301
Cdd:MTH00216  247 TTILFLGGWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVI 312
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-302 3.06e-103

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 305.19  E-value: 3.06e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMpTP---LSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILIS 157
Cdd:PRK06076   91 PAFLAWAVIPF-GPelvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 158 GNFTLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTI 237
Cdd:PRK06076  170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2562590965 238 SAIIFMGSSISTLPPLTTSL----LMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:PRK06076  250 ITTLFLGGWLPPFPLGGGIPgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 3-313 8.20e-97

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 288.22  E-value: 8.20e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALA 82
Cdd:MTH00010    6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL 162
Cdd:MTH00010   86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 163 QNFsITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIF 242
Cdd:MTH00010  166 SKI-IMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2562590965 243 MGSSISTLppLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPitLALTLWHIIIPISFLFT 313
Cdd:MTH00010  245 TSFIPSIF--ISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLP--MSLTSLMISIPIMFLLL 311
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-315 4.73e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 279.98  E-value: 4.73e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   4 ISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALAM 83
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  84 IIWTPLPMPTP--LSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFT 161
Cdd:MTH00029   91 LAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 162 LQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAII 241
Cdd:MTH00029  171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 242 FMGSSISTLPPLTTSL-----------------LMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHI 304
Cdd:MTH00029  251 FLGGWLSPLDGIPTPPeafsifeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                         330
                  ....*....|.
gi 2562590965 305 IIPISFLFTPP 315
Cdd:MTH00029  331 GILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 10-297 3.62e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 211.68  E-value: 3.62e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  10 IIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALALAMIIWTPL 89
Cdd:MTH00090    6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  90 PMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNFTL-QNFSIT 168
Cdd:MTH00090   86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFvSSFSLS 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 169 QEPIWLiipvwplamMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAIIFMGSSis 248
Cdd:MTH00090  166 LFVIYL---------PFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFS-- 234

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2562590965 249 tlpplttsllMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITL 297
Cdd:MTH00090  235 ----------FLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 1-290 2.86e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 183.97  E-value: 2.86e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   1 FAIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPTMALA 80
Cdd:MTH00058    2 FGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  81 LAMIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGNF 160
Cdd:MTH00058   82 LVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 161 TLQNFSITQEPIWLIIPVwpLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNTISAI 240
Cdd:MTH00058  162 SLVDFYYSGWLSVLLFPL--IYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSV 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2562590965 241 IFMGSsistlpplttSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWK 290
Cdd:MTH00058  240 LFFGG----------GFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWE 279
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-297 7.62e-49

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 166.67  E-value: 7.62e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   3 IISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPNVVGPFGLLQPIADGIKLFIKEPIRPSTSSQTLFLIAPtmALALA 82
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP--SIAVI 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  83 MIIWTPLPMP----TPLSNMNLSVLFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISG 158
Cdd:CHL00032  108 SILLSYLVIPfgyhLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 159 N------------FTLQNFSITQEPIWLIIpvwplammWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLA 226
Cdd:CHL00032  188 SlstvdiveaqskYGFWGWNLWRQPIGFIV--------FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 227 EYSNILMMNTISAIIFMGSSISTLPPL----------TTSLLMIKVSIL-----SMVFLWV----RASYPRFRYDQLMHL 287
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGWNLSIPYIfipelfeinkTGGVFGTTIGIFitlakTYLFLFIsittRWTLPRLRMDQLLNL 339

                         330
                  ....*....|
gi 2562590965 288 VWKNFLPITL 297
Cdd:CHL00032  340 GWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
2-302 1.88e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.83  E-value: 1.88e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965   2 AIISSLSYIIPILLAVAFLTLLERKVLGYMQHRKGPnvvgpfGLLQPIADGIKLFIKEPIRPSTSSQtLFLIAPTMALAL 81
Cdd:COG0650     3 LILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALAA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965  82 AMIIWTPLPMPTPLSNMNLSVLFILALSSLTVYSIL--GSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILISGN 159
Cdd:COG0650    76 MLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFlaLAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGS 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2562590965 160 F---TLQNFSITQEPIWLIIPVWPLAMMWYISSLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILMMNT 236
Cdd:COG0650   156 TslsDIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLS 235

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2562590965 237 ISAIIFMGSSISTLPPLTTSLLMIKVSILSMVFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLW 302
Cdd:COG0650   236 LFVNLFLPWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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