|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-724 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1380.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 1 MEYTYQCSWIIPFIPFPVPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 161 LIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEINVFFVTLFALLLFCGSVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNMVLMGGLTKHVPITKTAFLV 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 401 GTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFLNFNGKKNRSFYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 481 KKEvkhkLKNKNGLVVRLRMNNNEMTSFFIRKTYphRINQNVKNITRLFFDITHfgtKKTTCLYPHESDNTMQFSMFILV 560
Cdd:CHL00025 481 KEE----SKKINKLLLLLTMNNNERVSFFSKKTY--KIDGNVRNMIRSFITIFG---NKKTFSYPHESDNTMLFPLLVLV 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 561 LFTLFVGAIGISFSQNGIDWDILSKLLIPFIDLLHKNEKNLVDWYEFLTNATFSVILTFFGIFIASFFYKPVYSDLQNLN 640
Cdd:CHL00025 552 LFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLD 631
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 641 LLNLFEKSVPNKIVTDNFQNVIYDWSYNRGYIDAFYEIFFISSVRKLVKFNSFFDKKIIDGIPNGIGITSFFMGETIKYV 720
Cdd:CHL00025 632 LINSFVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYV 711
|
....
gi 2538322907 721 GGGR 724
Cdd:CHL00025 712 GGGR 715
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-724 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 685.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 1 MEYTYQCSWIIPFIPFPVPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 161 LIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEINVFFVTLFALLLFCGSVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNMVLMGGLTKHVPITKTAFLV 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 401 GTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhflNFNGKKNRSFYSISLWG 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRGNDKELQKELLAAA 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 481 KKEVKHKLKNKNGlvvrlrmnnnemtsffirKTYPHrinqnvknitrlffditHFGTkkttclyPHESDNTMQFSMFILV 560
Cdd:PRK07376 474 DAPGHHEGHHEEH------------------GEHHH-----------------HSGS-------PHESPWTMTLPLVVLA 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 561 LFTLFVGAIGISFSQNgidwdilskllipFIDLLHKNEKNLV-----DWYEFLTNATFSVILTFFGIFIASFFYkpvysd 635
Cdd:PRK07376 512 VPSVLIGLLGTPWNNR-------------FEAFLHAPGEALEaaahfEWGEFLILAGASVGIALIGITLASLMY------ 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 636 lqnlnllnlFEKSVPNKIVTDNFQnVIYDWSYNRGYIDAFYEIFFISSVRKLVKFNSFFDKKIIDGIPNGIGITSFFMGE 715
Cdd:PRK07376 573 ---------LLKKIDPAAIAERFP-PLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGE 642
|
....*....
gi 2538322907 716 TIKYVGGGR 724
Cdd:PRK07376 643 GLKYFENGR 651
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
9-724 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 554.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 9 WIIPFIPFpvpmligVGLLLFPTATKNLRRVWAF-PSIFLLILVMIFSVDRSIDQLNnSSIYQYVWSWTINNDLSLEFGY 87
Cdd:COG1009 5 WLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLG-GEVVVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 88 FIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFT 167
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 168 RPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIykneiNVFFVTLFALLLFCGSVAKSAQFPLH 247
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 328 GYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEvvvgysptkSQNMVLMGGLTKHVPITKTAFLVGTLSLCG 407
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 408 IPPFACFWSKDEILNDSW---LYSPIFAIIACSTAGLTAFYMFRIYLLVFegylnvhflnfngkknrsfysislWGKKev 484
Cdd:COG1009 383 IPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FGKP-- 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 485 khklknknglvvrlrmnnnemtsffiRKTYPHRinqnvknitrlffdithfgtkkttclyPHESDNTMQFSMFILVLFTL 564
Cdd:COG1009 437 --------------------------RPKTPKH---------------------------PHESPWLMTLPLVVLAVLSL 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 565 FVGAIGISFSQNGIDWDilsKLLIPFIDLLHKNEKNLVdwyefltnatfSVILTFFGIFIASFFYkpvysdlqnlnllnl 644
Cdd:COG1009 464 VLGLLLPGLLEGLLAPA---AVLGGELHLAHGLLLNAL-----------PLLLSLLGIALGYLLY--------------- 514
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 645 FEKSVPNKIVTDNFqnvIYDWSYNRGYIDAFYEIFFISSVRKLVKFNsFFDKKIIDGIPNGIGITSFFMGETIKYVGGGR 724
Cdd:COG1009 515 LKRPLPALAERLKP---LYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQTGY 590
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
9-707 |
3.83e-180 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 528.57 E-value: 3.83e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 9 WIIPFIPfpvpmLIGVGLLLFpTATKNLRRVWAFPSIFLLILVMIFSVDRSIDQLNNS--SIYQYVWSWTINNDLSLEFG 86
Cdd:PRK06590 6 WLIVLLP-----LIGALILGL-FGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVDFG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 YFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWF 166
Cdd:PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 167 TRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFqiiNNLIYKNEINVFFVTLFALLLFCGSVAKSAQFPL 246
Cdd:PRK06590 160 KKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVF---AAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 326
Cdd:PRK06590 237 HTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 327 LGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEvvvgysptKSQNMVLMGGLTKHVPITKTAFLVGTLSLC 406
Cdd:PRK06590 317 LGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLIGTLALI 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 407 GIPPFACFWSKDEILNDSWLYSPIFA-IIACSTAGLTAFYMFRIYLLVFegylnvhflnfngkknrsfysislwgkkevk 485
Cdd:PRK06590 389 GIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF------------------------------- 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 486 hklknknglvvrlrmnnnemtsffirktyphrinqnvknitrlffdithFGTKKTTCLYPHESDNTMQFSMFILVLFTLF 565
Cdd:PRK06590 438 -------------------------------------------------HGKEKEKIHHPHESPAVMTLPLIVLAVLSVF 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 566 VGAIGISfsqngidwdilsklliPFIDLLHKNEKNLVDWYEF---LTNATFSVILTFFGIFIASFFYKpvysdlqnlnll 642
Cdd:PRK06590 469 AGALIVP----------------PFLGVLPLTTELAHGEAEHhlpVWVALLPLVVALAGIALAWLLYL------------ 520
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2538322907 643 nlFEKSVPNKIVTDnfQNVIYDWSYNRGYIDAFYEIFFISSVRKLVKF-NSFFDKKIIDGIPNGIG 707
Cdd:PRK06590 521 --KKPTLPTSIAAP--GRFLYTLLRNKYYFDELYEKVFVKPGLALARLlWKDGDDGIIDGLVPNSA 582
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-714 |
2.93e-150 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 451.35 E-value: 2.93e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 44 SIFLLILVMIFSVDRSIDQLNNSS---IYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 121 YLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWIT 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 201 GSLEFRDLFQIINNLIYKneinvfFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 281 LPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 361 GSIIHSMEvvvgysptKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSW--LYSPIFAIIACST 438
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 439 AGLTAFYMFRIYLLVFEGylnvhflnfngkknrsfysislwgkKEVKHKLKNknglvvrlrmnnnemtsffirktyphri 518
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHG-------------------------KERHEADAH---------------------------- 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 519 nqnvknitrlffdithfgtkkttclyPHESDNTMQFSMFILVLFTLFVGAIGISFsqngidwdilsklLIPFID-LLHKN 597
Cdd:TIGR01974 446 --------------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPL-------------FEFLKGvLPTSA 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 598 EKNLVDWYEFLTNATFSVILTFFGIFIASFFYKPvysdlqnlnllnlfEKSVPNKIvtDNFQNVIYDWSYNRGYIDAFYE 677
Cdd:TIGR01974 487 EPALEHHHVPALEIWSPTAVAILGILLAYLLYLG--------------NPTLPAKI--AQRHSGLYRLLLNKWYFDELYD 550
|
650 660 670
....*....|....*....|....*....|....*...
gi 2538322907 678 IFFISSVRKLVKFNSFF-DKKIIDGIPNGIGITSFFMG 714
Cdd:TIGR01974 551 KVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGAIS 588
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-695 |
4.76e-117 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 352.30 E-value: 4.76e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 448 RIYLLVFEGYLNVHFLNFNGKKNRSFYSISLWGKKEVKhKLKNKNGLVVRLRMNNNEMTSFFIRKTYphRINQNVKNITR 527
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSK-LINKNFRTLLLLTMNNNEKVSFFSKKTY--RIDGNVRNMTR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 528 LFFDITHFGTKKTTcLYPHESDNTMQFSMFILVLFTLFVGAIGISFSQNGIDWDILSKLLIPFIDLLHKNEKNLVDWYEF 607
Cdd:pfam01010 78 PFITITHFDNKKTF-SYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 608 LTNATFSVILTFFGIFIASFFYKPVYSDLQNLNLLNLFEKSVPNKIVTDNFQNVIYDWSYNRGYIDAFYEIFFISSVRKL 687
Cdd:pfam01010 157 VTNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGL 236
|
....*...
gi 2538322907 688 VKFNSFFD 695
Cdd:pfam01010 237 AELTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-466 |
1.94e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 340.83 E-value: 1.94e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 63 LNNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 143 NLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEIn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 223 vffvTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITV 302
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 303 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgyspTKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSW-LYSPIFAI-IACSTAGLTAFYMFRIYLLVF------ 454
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFitntns 438
|
410
....*....|....
gi 2538322907 455 --EGYLNVHFLNFN 466
Cdd:MTH00210 439 kkEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
63-454 |
6.96e-107 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 338.98 E-value: 6.96e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 63 LNNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSS 142
Cdd:MTH00020 52 FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 143 NLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNein 222
Cdd:MTH00020 132 NYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPSSD--- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 223 vffVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITV 302
Cdd:MTH00020 209 ---ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 303 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgyspTKSQNMV 382
Cdd:MTH00020 286 FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWL-YSPIFAI-IACSTAGLTAFYMFRIYLLVF 454
Cdd:MTH00020 358 KMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-460 |
1.88e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 295.32 E-value: 1.88e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 20 MLIGVGLLLFPTATKNLRRVWAFPSIFL--LILVMIFsvdrsIDQLNNSSIYQyvWSWTINNDLSLEFGYFIDSLTSIMS 97
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFisLIPLLIF-----LDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 98 ILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQK 177
Cdd:MTH00211 86 SVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQ 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 178 AFVTNRVGDFCLLLGILGLYWITGSLEFRDLFqiinnliykneINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGP 257
Cdd:MTH00211 166 AVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 258 TPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG 337
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 338 SYRAALFHLITHAYSKALLFLGSGSIIHSMEvvvgysptKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSK 417
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLN--------NEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSK 386
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2538322907 418 DEIL---NDSWLYSPIFAIIACSTaGLTAFYMFRIYLLVFEGYLNV 460
Cdd:MTH00211 387 DLILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-719 |
1.49e-87 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 287.96 E-value: 1.49e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 6 QCSWIIPFIPfpvpmLIGvGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRS---IDQLNNSSIYQYVWSWTINNDLS 82
Cdd:PRK07390 7 QTSWLIPLYG-----LIG-ALLSLPWSPGIIRRTGPRPAAYLNLLMTLLAFVHSllaLRAIWNQPPQQLSFPWLQVADLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 83 LEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLI 162
Cdd:PRK07390 81 LSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 163 GFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNliykNEINVFFVTLFALLLFCGSVAKSA 242
Cdd:PRK07390 161 GFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAAT----ANLDPLTATLLGLALIAGPTGKCA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 243 QFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK07390 237 QFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 323 TMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGT 402
Cdd:PRK07390 316 TSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGS 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 403 LSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFegylnvhflnfngkknrsfysislWGKK 482
Cdd:PRK07390 387 AGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF------------------------LGKP 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 483 EVKhklknknglvvrlrmnnnemtsffirktyphrinqnvknitrlffdithfgTKKTTclyphESDNTMQFSMFILVLF 562
Cdd:PRK07390 443 QQK---------------------------------------------------TRRSP-----EVLWPMALPMVILAGF 466
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 563 TlfvgaigisfsqngidwdilskLLIPFIdlLHKNEKnLVDWYEFLTNATFSVIL-TFFGIFIASFFY------KPVYsd 635
Cdd:PRK07390 467 T----------------------LHLPLL--LQQWGL-LPSWEALNLWAAPLLVAsGLLGVLLGAWIYlnkawsRPIQ-- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 636 lqnlnllnlfeksVPNKIVTDNFQnviYDWsynrgYIDAFYEIFFISSVRKLVKFNSFFDKKIIDGIPNGIGITSFFMGE 715
Cdd:PRK07390 520 -------------LPLRFLQDLLA---YDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQ 578
|
....
gi 2538322907 716 TIKY 719
Cdd:PRK07390 579 GLKY 582
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
1.22e-83 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 267.26 E-value: 1.22e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 141 SSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 221 INVFFvtlfaLLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVLPAIMNGIALIG 298
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 299 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2538322907 376 TKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAG 440
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
1.95e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 278.77 E-value: 1.95e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 10 IIPFIPFPVPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVdrsidQLNNSSIYQYVWSWTINNDLSLEFGYFI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 90 DSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 170 IAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDL------FQIINNLIYKNEINVFFVTLFA---LLLFCGSVAK 240
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGAYESPLAPFAiigILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 321 YSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEVvvgysptKSQNMVLMGGLTKHVPITKTAFL 399
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 2538322907 400 VGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-453 |
4.93e-80 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 262.39 E-value: 4.93e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 11 IPFIPFPVPMLIGVGLLLFPTATKnLRRVWAFPSIFLLILVMIFSVdrsIDQLNNSSIYQYVWSWTinndLSLEFGYFID 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALALL---LQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 91 SLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 171 AANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIInnliykNEINVFFVTLFALLLFCGSVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLlpLFIVLPAIMNG-----IALIGIITVVLGATLAIAQKDIKKNLAYSTM 324
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRV--LTLLFGADPALflgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 325 SQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVG 401
Cdd:COG0651 306 SQIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIG 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2538322907 402 TLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRIYLLV 453
Cdd:COG0651 377 ALALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLLSS--LLTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-453 |
2.18e-78 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 267.17 E-value: 2.18e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 80 DLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSY 159
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 160 LLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQiINNLIYKNEinvfFVTLFALLLFCGSVA 239
Cdd:PRK12647 133 LLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLLVLGGAFT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK12647 208 KSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 320 AYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKT 396
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE---------TGTRDITKLGGLRRAMPITAA 358
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2538322907 397 AFLVGTLSLCGIPPFACFWSKDEILnDSWLYSPIFAIIACSTAGLTAFYMFRIYLLV 453
Cdd:PRK12647 359 AALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFLV 414
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
114-457 |
2.17e-77 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 260.48 E-value: 2.17e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 114 YMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGI 193
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 194 LGLYWITGSLEFRDLFqiinnliYKNEINvffvTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00004 187 AWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 274 IFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSK 353
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 354 ALLFLGSGSIIHSMevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKD---EILNDSWLYSPI 430
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWA 407
|
330 340
....*....|....*....|....*..
gi 2538322907 431 FAIIACSTAgLTAFYMFRIYLLVFEGY 457
Cdd:MTH00004 408 LLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
1.44e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 258.30 E-value: 1.44e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 73 WSW-TINN---DLSLEFGYFidsltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNL 144
Cdd:MTH00066 64 FHWmNIFNfniNSSFKFDQY--------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 145 IQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFqiinnLIYKNEinvf 224
Cdd:MTH00066 136 FQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNS---- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 225 fvTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVL 304
Cdd:MTH00066 207 --TLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 305 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgyspTKSQNMVLM 384
Cdd:MTH00066 285 TAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 385 GGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
41-454 |
2.57e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 258.36 E-value: 2.57e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 41 AFPSIFLLILVMIFSVDRSIDQLNNssiyqyvwsWTINNDLSLEFGYFIDSLtsimSILITTVGILV----LIYSDNYMS 116
Cdd:MTH00208 66 AFLSLINLLIWILLGCPNINISLSN---------WLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 117 HDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGL 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 197 YWITGSLEfrdlfqiINNLIYKNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL 276
Cdd:MTH00208 213 LINFNSWN-------LNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 277 VARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 357 FLGSGSIIHSMevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIF 431
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIIL 437
|
410 420
....*....|....*....|...
gi 2538322907 432 AIIACStagLTAFYMFRIYLLVF 454
Cdd:MTH00208 438 ALIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
73-457 |
1.11e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.21 E-value: 1.11e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 73 WSW----TINNDLSLEFGYFidsltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNL 144
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 145 IQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLllgILGLYWI---TGSLEFRDLFQIINNliyknei 221
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKD------- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 222 nvFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivlpaiM--NGIAL--- 296
Cdd:MTH00137 212 --FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPL-------MenNQTALttc 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 297 --IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgys 374
Cdd:MTH00137 283 lcLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL------- 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 375 pTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00137 356 -NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
....*...
gi 2538322907 450 YLLVFEGY 457
Cdd:MTH00137 432 VFFVSMGH 439
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
81-417 |
2.44e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 251.38 E-value: 2.44e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSY 159
Cdd:PRK12645 68 LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 160 LLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDlfqIINNLiykNEINVFFVTLFALLLF-CGSV 238
Cdd:PRK12645 148 LLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIRE---MIANA---DEIQNSPLFIPAMILIlLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKN 318
Cdd:PRK12645 222 TKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 319 LAYSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMV 382
Cdd:PRK12645 302 LAFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE---------TGTRDIR 372
|
330 340 350
....*....|....*....|....*....|....*
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSK 417
Cdd:PRK12645 373 KLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-456 |
1.19e-71 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 252.03 E-value: 1.19e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYL 160
Cdd:PRK12648 66 LGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 161 LIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQ----IINNLIYkneinvffvtLFALLLFC- 235
Cdd:PRK12648 146 LIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAagdlIRAHPLY----------PPALVLILl 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 236 GSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDI 315
Cdd:PRK12648 216 GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 316 KKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVP 392
Cdd:PRK12648 296 KGLLAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDHE---------TGTRDMRRLSGLRRLMP 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 393 ITKTAFLVGTLSLCGIPPFACFWSK----DEILNDSWLYS-----PIFAIIAcstAGLTAFYMFRIYLLVFEG 456
Cdd:PRK12648 367 ITATLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA---GAFSVAYSLRFIHDVFFG 436
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-456 |
1.32e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 249.38 E-value: 1.32e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 161 LIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQiinnliYKNEINVFFVTLFALLL-FCGSVA 239
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIA------SADAIRNSPLFGTAMVLvLLGAFT 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:TIGR00940 219 KSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGIL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 320 AYSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVL 383
Cdd:TIGR00940 299 AFSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRK 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 384 MGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILN-------------DSWLYspIFAIIACSTAGLTAFYMFRIY 450
Cdd:TIGR00940 370 LGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFI 447
|
....*.
gi 2538322907 451 LLVFEG 456
Cdd:TIGR00940 448 HGVFFG 453
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
73-456 |
4.17e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 243.61 E-value: 4.17e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 73 WSW----TINNDLSLEFGYFidsltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNL 144
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 145 IQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLllgILGLYWI---TGSLEFRDLFqIINNliyknei 221
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGF---ILAMAWFllnLNSWDLQQIF-MLNP------- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 222 NVFFVTLFALLLfcGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIIT 301
Cdd:MTH00108 207 NNSNLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAIT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgyspTKSQNM 381
Cdd:MTH00108 285 TLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDI 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 382 VLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKD---EILNDSwlYSPIFA----IIACStagLTAFYMFRIYLLVF 454
Cdd:MTH00108 357 RKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNAWAllitLIATS---LTAAYSTRIIFFAL 431
|
..
gi 2538322907 455 EG 456
Cdd:MTH00108 432 LG 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
85-454 |
1.59e-68 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 233.33 E-value: 1.59e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 85 FGYFIDSLTSIMSILITTVGILVLIYSDNYMS-------HDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMC 157
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 158 SYLLIGFWFTrPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKneinvffvtLFALLLFCGS 237
Cdd:PRK06525 149 SWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYL---------VFLGILFAAW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 238 vAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGI-ALIGIITVVLGATLAIAQKDIK 316
Cdd:PRK06525 219 -GKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 317 KNLAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKH 390
Cdd:PRK06525 298 RLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYS---------CGTRLLPRLRGVLKK 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 391 VPITKTAFLVGTLSLCGIPPFACFWSKDEIL-------NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPPFNGFFSKFPIFaagfelsVEYWILLPAMVLLLIESVASFAWFLRWFGRVVF 439
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
71-448 |
5.65e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 235.97 E-value: 5.65e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 71 YVWSWTinNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMILFNISMLGLVTSSNLIQIYV 149
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 150 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDlfqIINNLIykneiNVFFVTLF 229
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE---LLADPP-----TGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 230 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLA 309
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 310 IAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGG 386
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS---------TGTRDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 387 LTKHVPITKTAFLVGTLSLCGIPPFACFWSK----DEILNDSWLYSPIFAIIACSTAG--LTAFYMFR 448
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
1.91e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 232.03 E-value: 1.91e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 83 LEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 163 GFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQ---IINNLiykNEINVFFVTLfaLLLFCGSVA 239
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQdseLIENI---KGHPLFLITL--ILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 320 AYSTMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVP 392
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMP 377
|
330 340
....*....|....*....|....*.
gi 2538322907 393 ITKTAFLVGTLSLCGIPPFACFWSKD 418
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-418 |
3.02e-61 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 220.40 E-value: 3.02e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSY 159
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 160 LLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLiykNEINVFFVTLFALLLfcGSVA 239
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI---KNHGLFIPMIFMFLL--GAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 320 AYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMV 382
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIR 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKD 418
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
44-470 |
5.39e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 212.69 E-value: 5.39e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 44 SIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 124 FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFCLLLGIlGLYWITGSL 203
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 204 EFrdlfqIINNLIYKNEinvFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:MTH00165 165 NF-----IFYLDFMKNS---FEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 284 FIVLPaIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00165 237 LFSSF-FSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 364 IHSMEvvvgysptKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKD---EILNDSWLYSPIFAIIACSTaG 440
Cdd:MTH00165 316 IHNMS--------NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST-G 386
|
410 420 430
....*....|....*....|....*....|
gi 2538322907 441 LTAFYMFRIYLLVFEGYLNVHFLNFNGKKN 470
Cdd:MTH00165 387 LTVSYSFRLIYYSMSGDFNLKSLNNLSDES 416
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-471 |
1.58e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 211.04 E-value: 1.58e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 45 IFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 125 FAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFCLLLGILGL----YWIT 200
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMlmhgNWNI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 201 GSLEFRDLFQIinnliykneinvfFVTLFALLlfcGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00209 165 FYLNFNSNLGS-------------VISVLIVL---AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 281 LPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 360
Cdd:MTH00209 229 FPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 361 GSIIHSMevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILnDSWLYS--PIFAIIACST 438
Cdd:MTH00209 309 GNIIHSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFL 379
|
410 420 430
....*....|....*....|....*....|....
gi 2538322907 439 A-GLTAFYMFRIYLLVFEGYLNVHFLNFNGKKNR 471
Cdd:MTH00209 380 StSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
2.03e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 210.85 E-value: 2.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 44 SIFLLILVMIFSVDRSIDQLNNSSiyqYVWSWTINN--DLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSvsSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 122 LRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGDFCLLLGILGL----Y 197
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLvllgH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 198 WITGSLEFRDLFQIInnliykneinVFFVTLfalllfcGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:MTH00151 164 WSILSMWDFKLSGWL----------GLLLVL-------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 278 ARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLF 357
Cdd:MTH00151 227 IRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLF 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 358 LGSGSIIHSMevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAII 434
Cdd:MTH00151 307 LCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLM 378
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2538322907 435 ACSTaGLTAFYMFRIYLLVFEGYLNVHFLnfNGKKNRSFY 474
Cdd:MTH00151 379 FVGV-GLTALYSARLSFCLVWGSMKSSSL--SSKSDEDFY 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
3.10e-58 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 205.70 E-value: 3.10e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 18 VPMLIGVGLLLFPTATKNLRRVWAFPS---IFLLILVMIFSVDRSIDQlnnssiYQYVWSWTINNDLSLEFGYFIDSLTS 94
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGG------FQFVESYPWIPSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 95 IMSILITTVGILVLIYSDNYMSHDQGylRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFW--FTRPIAA 172
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 173 NacqKAFVTNRVGDFCLLLGILGLYWITGSLEFrDLFQIinnliYKNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPD 252
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAEL-----AAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 253 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLF-IVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 329
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 330 MMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLC 406
Cdd:COG1008 314 VLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVL---------YDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 407 GIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLN 459
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
46-456 |
5.32e-57 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 202.89 E-value: 5.32e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 46 FLLILVMIF-SVDRSIDQLNN---------SSIYQYVWSWTINNDLSLEFG---------YFIDSLTSIMSILITTVGIL 106
Cdd:PRK12667 18 FLLPLLSILlKGNRKIQKIYAllvslitliLSILLFIQVYSSNKPIVYLFGgwpapigivYEVDLLGALLGLLTALVMFL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 107 VLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGD 186
Cdd:PRK12667 98 ILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGT 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 187 FCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEI----NVFFVTLFALLLFCGSVA-KSAQFPLHVWLPDAM-EGPTPI 260
Cdd:PRK12667 178 TLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAAIFPNHFWLPDAHpAAPSPV 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 261 SALIhAATMVAAGIFLVARLL------------PLFIVLPAIMngiaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLG 328
Cdd:PRK12667 258 SAML-SGLVVNVGAYAIIRFLytifgispslidFRAALSPILI----ILGAVSAIIGALMMVVQKDVKRLLAYSTISHMG 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 329 YMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSL 405
Cdd:PRK12667 333 YIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA---------AGTRDIDELAGLGRKMPIASFAFLIGALSL 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 406 CGIPPFACFWSKdEILNDSWLYS--PIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK12667 404 VGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-456 |
4.64e-56 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 199.72 E-value: 4.64e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 21 LIGVGLLLFPTATKNLRRVWAF-PSIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTInndlslefGYFIDSLTSIMSIL 99
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRADSLSALFLLV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 100 ITTVGILVLIYSDNYMSHDQgylRFFAYMILFNIS-MLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPiAANACQKA 178
Cdd:PRK08375 86 TSILAIAALLYAIGYGEHRQ---TRFYALFLLLLAgLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-ALAAARKY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 179 FVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNliykneiNVFFVTLFALLLFCGSVaKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK08375 162 LIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE-------NPTVVTAFGFVLLALAL-KAAVFPLHTWLPRAYPAAP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 259 PISALIHAATMVAAGIFLVARLL-----PLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLA 333
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 334 LGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPP 410
Cdd:PRK08375 314 LALLTPLalaAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2538322907 411 FACFWSKDEIL---NDSWLYSPIFAIIACSTagLTAFYMFRIYLLVFEG 456
Cdd:PRK08375 385 TSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRIWYRAFFG 431
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-456 |
6.71e-55 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 197.24 E-value: 6.71e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 18 VPMLIGVGLLLFPTATKNLRRVWAfpsIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDLSLEFGYF-------ID 90
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFpiriiweVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 91 SLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK08376 90 LFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 171 AANACQKAFVTNRVGDFCLLLGILGLYWITGSLEfrdlfqiINNLIYKNEINVFFVTLFALLLFCGSVA-KSAQFPLHVW 249
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 250 LPDAM-EGPTPISALIHAATmvAAGIFLVARLLpLFIVLPAIMNG-----IALIGIITVVLGATLAIAQKDIKKNLAYST 323
Cdd:PRK08376 243 LPDAYpAAPSSISAMLLVIK--QAGLYALARVL-FSIYGPAINLAtvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 324 MSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLT 388
Cdd:PRK08376 320 VSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYE---------TGTRNLNELGGLA 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 389 KHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
18-447 |
6.31e-54 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 201.04 E-value: 6.31e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 18 VPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRSIDQLNNSSI-YQYVWSWTI-NNDLSLEFGYFIDSLTSI 95
Cdd:PRK12650 4 VLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALSLF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 96 MSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFwfTRPIAANAC 175
Cdd:PRK12650 84 FALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 176 QKAFVTNRVGDFCLLLGILGLYWITGSLEfrdLFQIINNLIYKNeiNVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAME 255
Cdd:PRK12650 162 IRTLILTFFGGLTLLAAVAIAATQTGTTS---LSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 256 GPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALG 335
Cdd:PRK12650 237 AITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 336 MGS---YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFA 412
Cdd:PRK12650 317 VGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ---------AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLF 387
|
410 420 430
....*....|....*....|....*....|....*...
gi 2538322907 413 CFWSKDEILnDSWLYSPIFA---IIACSTAGLTAFYMF 447
Cdd:PRK12650 388 GFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
73-453 |
1.03e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 194.98 E-value: 1.03e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 73 WSWTINNDLSLEFGYF-IDSLTSIMSILITTVGIL-----------VLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVT 140
Cdd:MTH00207 27 YLMMCNKTILIEWEIFtISSSPINFTIILDPTGTLfsstvlfisanVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIF 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 141 SSNLIQIYVFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFCLLLGI-LGL---YWITGSLEFRDlfqiINNLI 216
Cdd:MTH00207 107 FPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIgWTLnqgHWSITNMWQTD----MNNYI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 217 ykneinvffvtlfALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIAL 296
Cdd:MTH00207 182 -------------ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 297 IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEvvvgyspt 376
Cdd:MTH00207 249 TASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH-------- 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 377 KSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLY---SPIFAIIACSTaGLTAFYMFRIYLLV 453
Cdd:MTH00207 321 HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphnSLMILMIFLAT-ALTAAYSTRFTLAV 399
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
2.60e-44 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 169.68 E-value: 2.60e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 89 IDSLTSIMSILITTVGILVLIYSDNYMSHDQGY----LRFFayMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 165 WFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDlfqiinnlIYKNEINVFFVTLFALLLFCGSVAKSAQF 244
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVLPAIMNGIAL--IGIITVVLGATLAIAQKDIKKNLAY 321
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVlaLGAISAVLGVLYALAEHDLKRLLAY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 322 STMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGL 387
Cdd:PRK06521 307 STIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHA---------TGTRDMEKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 388 TKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL--------NDSWLYS---PIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK06521 378 IRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-449 |
1.41e-43 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 164.13 E-value: 1.41e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 10 IIPFIPFPVPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVdrsidqlnnssiyqyVWSWTINNDLSLEFGYFI 89
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALL---------------LLALGGGTGTAFGGMFVV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 90 DSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNIS-MLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTR 168
Cdd:COG1007 69 DGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 169 PIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNeinvfFVTLFALLLFCGSVA-KSAQFPLH 247
Cdd:COG1007 149 RRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANS-----PLLLLGLVLVLAGLAfKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 248 VWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLplFIVLPAIMNG----IALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:COG1007 224 MWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLL--VEAFPGLAADwqllLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 323 TMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsGSIIHsmevvVGYSPTKSQNMVLMGGLTKHVPITKTAFL 399
Cdd:COG1007 301 SIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAF---AVILL-----LSRKGGEAEEIEDLAGLARRSPLLALAMT 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 400 VGTLSLCGIPPFACFWSKDEILNDSW---LYspIFAIIACSTAGLTAFYMFRI 449
Cdd:COG1007 373 IFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-456 |
9.13e-43 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 162.29 E-value: 9.13e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 8 SWIIpFIPfpvpmLIGVGLLLF--PTATKNLRRVWAFPSI--FLLILVMIFSVDRSIDQLNnsSIYQYVWSWTINndLSL 83
Cdd:PRK05846 7 SLLI-FLP-----LIGGLLVLLteRFGARLARWIALIGTLltLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 84 EFGyfIDSLTSIMSILITTVGILVLIYSDNYMSHDQGylrffAYMILFNIS---MLGLVTSSNLIQIYVFWE--LVGMcs 158
Cdd:PRK05846 77 HLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK-----FYMAALLWLeggVIGVFAALDLLLFYVFFEamLIPM-- 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 159 YLLIGFW--FTRPIAANacqKAFVTNRVGDFCLLLGILGLYWI----TGSLEFRDLfqiinnliYKNEINVFFVTLFALL 232
Cdd:PRK05846 148 YFLIGVWggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLA 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 233 LFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVLPAIMNGIALI-GIITVVLGATLAI 310
Cdd:PRK05846 217 FFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVAL 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 311 AQKDIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGL 387
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVL---------YDRLHTRDIADYGGL 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2538322907 388 TKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK05846 368 AKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-417 |
3.79e-41 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 159.78 E-value: 3.79e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 41 AFPSIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTInndlslefgyfidsLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTH--------------LSWFFAMISLLVIFSVAFFMVSEKTKNDA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 121 YLRFFAYMILfnISMLGLVTSSNLIQIYVFWELVGMCSYLLIgfWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWIT 200
Cdd:PRK08668 99 YFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 201 GSLEFRDlfqIINNLIYKNEINvfFVTLFALLLFCGSVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLV 277
Cdd:PRK08668 175 GTFDFAD---ISQGLINDTSTG--FALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLV 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 278 ARLLP---LFIVLPAIMNG------IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFH 345
Cdd:PRK08668 250 LYVLPgtkLFSEFGTYRGVplfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFH 329
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2538322907 346 LITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSK 417
Cdd:PRK08668 330 VFNHALFKGLFFLIFAAVIYR---------TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
8.26e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 157.17 E-value: 8.26e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 10 IIPFIPFpVPMLIGVGLLLF-PTATKNLRRVWAFPSIFLLILVMIFSVDRSIDqlnnssiyqyvWSWTINNDLSLefgyf 88
Cdd:PRK08168 5 VCALLPA-VLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATG-----------AAWPAAAWLEV----- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 89 iDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 169 PIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINN---LIYkneinvffVTLFALLLFCGSVAKSAQFP 245
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAqgaSPS--------LQAAALLLVLAVILKTAQLP 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 246 LHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMS 325
Cdd:PRK08168 219 VHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVA 297
|
330 340 350
....*....|....*....|....*....|....*....
gi 2538322907 326 QLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 298 QMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
87-454 |
4.64e-40 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 154.21 E-value: 4.64e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 YFIDSLTSIMSILITTVGILVLIYSDNYMShDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWF 166
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 167 TRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEINVF-FVTLFALLLFcgsvaKSAQFP 245
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFgLVFLLVGLAF-----KLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGI-ALIGIITVVLGATLAIAQKDIKKNLAYST 323
Cdd:PRK05777 223 FHMWTPDVYEGaPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVlAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 324 MSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEVVVGYSPTKSQnmvlMGGLTKHVPITKTAFLV 400
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 401 GTLSLCGIPPFACFWSKDEIL------NDSWLyspifAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRVIKLMY 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
8-456 |
6.56e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 150.86 E-value: 6.56e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 8 SWIIpFIPfpvpmLIGVGLLLFPTATKNLRRVWAFPSI----FLLILVMIFSVDRSIDQlnnssiYQYVWSWTINNDLSL 83
Cdd:TIGR01972 2 SLLI-FLP-----LIGALLILLLPSNKDGKARWIALVValatLLLSLLLLFQFDPTGSG------FQFTEDIPWIPALGI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 84 EFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIG 163
Cdd:TIGR01972 70 SYHLGVDGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 164 FWfTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGslefrDLFQIinNLIYKNEINVFFVTLFALLLFCGSVAKSAQ 243
Cdd:TIGR01972 148 VW-GGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL--LELLNLPLPFGVQTWLFLAFFIAFAVKVPL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 244 FPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLVARLLPLFivlPAIMNG----IALIGIITVVLGATLAIAQKDIKKN 318
Cdd:TIGR01972 220 FPLHTWLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PDASLYfapvLAALGVIAIIYGALIALAQTDIKRL 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 319 LAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITK 395
Cdd:TIGR01972 297 IAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLA 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 396 TAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:TIGR01972 368 AFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-454 |
2.97e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 149.20 E-value: 2.97e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 75 WTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYS-----DNYMSHDQGYLRFFAYMILFNISmlgLVTSSNLIQIYV 149
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTpkylaINNIDSSSRFLFFFNLTILIGVL---IALSSDLFTMFV 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 150 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRdlfqiinnliyKNEINVFFVTLF 229
Cdd:PRK06589 144 CYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV-----------SGGLFSKNQSII 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 230 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLpLFIVLPAIM-------NGIALIGIITV 302
Cdd:PRK06589 213 LLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLqrifaefNWLIFIPIVSI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 303 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQ 379
Cdd:PRK06589 292 FYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKED 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 380 NMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
5.94e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 144.49 E-value: 5.94e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 20 MLIGVGLLLFPTATK---NLRRVWAFPSIFLL---ILVMIFSVdrSIDQLNNSSIYQYVWSWTInndlSLEFGYFIDSLT 93
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLviaIALLLFAG--SLQLFTGNPLDIPLWGIAP----GLDITFHIDRLA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 94 SIMSILITTVGILVLIYSDNYMSHDQGYLR---FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK08667 80 AFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 171 AANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLfqiinnliyknEINVFFVTLFALLLFCGSVAKSAQFPLHVWL 250
Cdd:PRK08667 160 TQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 251 PDAMEG-PTPISALIhAATMVAAGIFLVARLLpLFIVLPAIMNG--IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:PRK08667 229 PYAHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWWGvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 328 GYMMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPI 393
Cdd:PRK08667 307 GIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHA---------TGTRNIEKMGGLVKLMPY 377
|
410 420
....*....|....*....|....
gi 2538322907 394 TKTAFLVGTLSLCGIPPFACFWSK 417
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASE 401
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-468 |
6.58e-35 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 139.67 E-value: 6.58e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 81 LSLEFGYFIDSLtsIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 161 LIGFWFTrpiaANACQKA---FVTNRVGDFCLLLGILGlyWITGSLEFRDLFqiinnliykneinvFFVTLFALLLFCGS 237
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSG--FIFSSYYFFSFS--------------FFSSSMILMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLpAIMNGIALIGIITVVLGATLAIAQKDIKK 317
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 318 NLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMevvvgyspTKSQNMVLMGGLTKHVPITKTA 397
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN--------FGQQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 398 FLVGTLSLCGIPPFACFWSKDEILNDSWL--YSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFLNFNGK 468
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSV 398
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
88-416 |
5.36e-34 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 136.60 E-value: 5.36e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 88 FIDSLTSIMSILITTVGILVLIYSDNYMSHDQ-------GYLRFFAYMI-LFNISMLGLVTSSNLIQIYVFWELVGMCSY 159
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 160 LLIGFWFTRPiAANACQKAFVTNRVGDFCLLLGILGLYW----ITGSLEFRDLFQIINNliYKNEINVFFVTLFALLLFC 235
Cdd:PRK06458 146 LLVGIYRTRA-SLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEMAILWTELLK--HASLLDPTLMKLAFVFLLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 236 GSVAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLLPLFIVLpaimngialiGIITV 302
Cdd:PRK06458 223 GFGTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 303 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQ 379
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQK---------YGTR 363
|
330 340 350
....*....|....*....|....*....|....*..
gi 2538322907 380 NMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWS 416
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
127-421 |
9.13e-34 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 136.05 E-value: 9.13e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 127 YMILFNISMLG---LVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFCLLLGILGLYWITGSL 203
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 204 EFRDLFQIINNliykneINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLP 282
Cdd:PRK08377 189 NMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 283 LFIVLPAIMNGIALI---GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALL 356
Cdd:PRK08377 262 LMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2538322907 357 FLGSGSIIHSMevvvgysptKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL 421
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-457 |
1.51e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 132.00 E-value: 1.51e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 19 PMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIfsvdrsidqlnnsSIYQYVWSWTINNDLSLEfgyfIDSLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVA-------------SMVPLELTLLDNFGVTLR----ADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 99 LITTVGILVLIYSdnyMSHDQGylRFFAYMILFNISMLGLV-TSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQK 177
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKT--RFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 178 AFVTNRVGDFcLLLGILGLYWITGSLEFRDLFQiinnliykneinvffVTLFAL-LLFCGSVAKSAQFPLHVWLPDAMEG 256
Cdd:PRK07234 150 LFYSNVAMLF-YLIGAVLVYQANGTFAFSGLAT---------------ADPEAFaLIALGLLVKGGIFVSGLWLPLTHSE 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 257 PTPISALIHAATMVAAGIFLVARLLplfIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM 336
Cdd:PRK07234 214 AEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 337 GsyraALFHLiTHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITktaflVGTLSLCGIPPFACFWS 416
Cdd:PRK07234 291 G----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVS 351
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2538322907 417 KDEILndsWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGY 457
Cdd:PRK07234 352 KVLTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSAD 389
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-457 |
2.69e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 128.53 E-value: 2.69e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 14 IPFPVPMLIGVgLLLFPTATKNLRRVWAFPSIFLLILVMIFSVdrsIDQLNNSSIYQYVWSWTINNDLSLefgyFIDSLT 93
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVALIGSLLTLVAAIILV---ANVYKHGIQTLELGNWKAPFGIVF----VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 94 SIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRpIAAN 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 174 ACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNE-----INVFFVTLFALllfcgsvaKSAQFPLHV 248
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTglitvVAILFLFVFAT--------KAGLFPLYF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 249 WLPDAMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--LPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMS 325
Cdd:PRK07691 231 WLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMI 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 326 QLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGT 402
Cdd:PRK07691 310 AVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIKI---------TGTTDLKKMGGLIKRYPVLGWMFFIAA 380
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2538322907 403 LSLCGIPPFACFWSKDEILNDSWLY-SPIFAIIACSTAGLTAFYMFRIYLLVFEGY 457
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
45-473 |
1.46e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 122.75 E-value: 1.46e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 45 IFLLILVMIFSVDRSIDQLNN--------SSIYQYVWSWTINNDLSLEFGYFI-DSLTSIMSILITTVGILVLIYSDNYM 115
Cdd:TIGR01770 15 FILLLYGLFYSRKKRNPLLLKnlsyivllSALVSLFLTLQYAAYLFTGFSFFIvDNFALLIKLILLLSTLLTFFFALSYL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 116 ShdQGYLRFFAYMILFNISMLG---LVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLG 192
Cdd:TIGR01770 95 S--KEKINKFEFYILLLFALLGiflLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 193 ILGLYWITGSLEFRDLFQIINNLiyknEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVA 271
Cdd:TIGR01770 173 ISLIYGFTGSLNFEDLLLFLSNG----MLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 272 A-GIFLVARLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLI 347
Cdd:TIGR01770 249 IfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIF 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 348 THAYSKALLFlgsgSIIHSMEVvvgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL-----N 422
Cdd:TIGR01770 329 IYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFfallkS 401
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 423 DSWLYSPIFAIIACstagLTAFYMFRIYLLVFEGYLNVHFLNFNGKKNRSF 473
Cdd:TIGR01770 402 GLYWLAVIAVLTSV----IGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-454 |
3.66e-29 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 121.98 E-value: 3.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 8 SWIIpFIPFPVPMLIGVGLLLFPTATKnLRRVWAFPSIFLLILVMIFSVDRSIDqlnnssiyqyvwswtiNNDLSLEFG- 86
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLISLALLIYVQR----------------HGPITLDFGg 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 --------YFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCS 158
Cdd:PRK12663 65 wlppfgiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIAS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 159 YLLIGFWFTRPiAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEInvffvTLFALLLFCGSV 238
Cdd:PRK12663 145 FVLITLGQERE-QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL-----TTIALLFLLAFG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 239 AKSAQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVLPAIMNG-IALIGIITVVLGATLAIAQKDI 315
Cdd:PRK12663 219 MKAALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDI 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 316 KKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeVVVGYSPTKSqnmvlMGGLTKHVP 392
Cdd:PRK12663 297 RRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEP 367
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2538322907 393 ITKTAFLVGTLSLCGIPPFACFWSKDEIL-----NDSWlyspIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK12663 368 LFGALFLILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
1.06e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 117.83 E-value: 1.06e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 89 IDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYM--ILFNISMLGLvtSSNLIQIYVFWELVGMCSYLLIGFWF 166
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFtfTTGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 167 TRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSlefrdlFQIINNLIYKN--EINVFFVTLFALLLFCGSVAKSAQF 244
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGE------WQLTSVLSNENlaQLGTWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFivlpaiMNGIA-----LIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLF------HDDIAqilllIFASISVLIGTGISLVQVDYKRQL 294
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 320 AYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNMVLMGGL 387
Cdd:PRK08601 295 VGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-417 |
1.35e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 118.07 E-value: 1.35e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 10 IIPFIPFPVPMLIGVGLLLFptatknLRRVWAFPsifLLILVMIFSVdrsidqlnnssiyqyVWSWTINNDLSLEFGYF- 88
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPF------LPGRARKA---LLLLAPVLAV---------------LAVLTVPEGTYLTVTFLg 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 89 -------IDSLTSIMSILITTVGILVLIYSdnymSHDQGYLRFFAYMiLFNISMLGLVTSSNLIQIYVFWELVGMCSYLL 161
Cdd:PRK12668 58 fdlvlgrVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAAL-LYVGSALGAVFAGDLLTLFVFWELMAFTSTFL 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 162 IgfWFTR-PIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFrDLFQIINnliykneinvffvTLFALLLFCGSVAK 240
Cdd:PRK12668 133 V--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVN 196
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLpaimngiALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:PRK12668 197 AAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLRRLLS 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 321 YSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTA 397
Cdd:PRK12668 270 YHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR---------TGTEKLTELGGLYRSMPLTALF 340
|
410 420
....*....|....*....|
gi 2538322907 398 FLVGTLSLCGIPPFACFWSK 417
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSK 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-449 |
1.56e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 110.98 E-value: 1.56e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 18 VPMLIGVGLLLfptaTKNLRRVWAFpSIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDLSLEfgyfIDSLTSIMS 97
Cdd:PRK12662 12 IPLLSAVVCAL----LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATML 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 98 ILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPiAAN 173
Cdd:PRK12662 83 VLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 174 ACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLiYKNEInvffVTLFALLLFCGSVAKSAQFPLHVWLPDA 253
Cdd:PRK12662 161 AAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDL-PTNRA----IQIGVLFIMVGLFIKAALFPFHKWLIQA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 254 M-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 326
Cdd:PRK12662 236 YsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 327 LGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHsmevvvGYSPTKSQNMVlmgGLTKHVPITKTAFLVGTL 403
Cdd:PRK12662 315 IGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKITLAFVLLSL 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2538322907 404 SLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRI 449
Cdd:PRK12662 386 SLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.14e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 108.81 E-value: 1.14e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 44 SIFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDlslefgyfIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00063 6 SLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFD--------FDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 124 FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFCLLLgILGLYWITGSl 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 204 efrdlfqiinnliykneINVFFVTLFALLLFcgsvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 283
Cdd:MTH00063 155 -----------------GSFLCCLFFFLIVF----TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 284 FIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 364 IhsmevvVGYSPTKSQNMVLMGGLTKHVPITKTAFLVgtLSLCGIPPFACFWSKDEILND--SWLYSPIFAIIACSTAGL 441
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 2538322907 442 TAFYMFRIYLLVF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
124-464 |
4.12e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 106.71 E-value: 4.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 124 FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFW--FTRPIAAnacQKAFVTNRVGDFCLLLGILGLYWITG 201
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGYAA---TKFLLYTAISGILILVSFLGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 202 SLEFRDLFQIINNLIYKNEInvffvtLFALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL 280
Cdd:PRK06473 186 ASSFDYEPLRSHTLPLSTQL------LLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRF 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 281 -LPLFI-VLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKAL 355
Cdd:PRK06473 259 gVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 356 LFLGSGsiihsmevvVGYSPTKSQNMVLMGGL---TKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFA 432
Cdd:PRK06473 339 LFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQT 409
|
330 340 350
....*....|....*....|....*....|..
gi 2538322907 433 IIACSTAGLTAFYMFRIYLLVFEGYLNVHFLN 464
Cdd:PRK06473 410 LLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-451 |
5.65e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 100.17 E-value: 5.65e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 16 FPVPMLIGVGLLLFPTATKNLRRVWAFPS--IFLLILVMIFSVDRSIDQLNnssiYQYVWSWtiNNDLSLEFGYFIDSLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPW--NEPLGLSYSLGVDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 94 SIMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPiAAN 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 174 ACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLiyknEINVFFVTLFALLLFCGsvAKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNL----SLNTQLILLTGLLLGFG--IKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 254 MEGPTPISALIHAATMVAAGIFLVARL-LPLF-----IVLPaimnGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLFpqtwsLVAP----GLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 328 GYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEVVVGysptkSQNMVLMGGLTKHV---PITKTAFLVG 401
Cdd:PRK07363 308 GYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLA 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2538322907 402 TLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYmFRIYL 451
Cdd:PRK07363 379 GMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-454 |
2.46e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 95.04 E-value: 2.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 227 TLFALLLFCGSVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVLPAIMNGIALIGIITVVLG 305
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 306 ATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEVVVGysptkSQNMV 382
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL-----NDSWLyspIFAIIACS--TAGLTAFYMFRIYLLVF 454
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-446 |
2.79e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 94.82 E-value: 2.79e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 YFIDSLtSIMSILITTVG-ILVLIYSDNYMSH-------DQGYLRFF--AYMILFNISMLGLVtSSNLIQIYVFWELVGM 156
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVFylGFNLLLSVITFAFF-SDNLALFWIFAELTTV 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 157 CSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLlGILGLYWIT------GSLEFRDLfqiinnLIYKNEINVFFVTLFA 230
Cdd:PRK08676 137 FSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLGASF 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 231 LLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VLPAIMNGIALIGIITVVLGA 306
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 307 TLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMevvvgYSPTKSQNmvl 383
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR--- 359
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 384 MGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDS-----WLYSPIFAIIACSTAGLTAFYM 446
Cdd:PRK08676 360 IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
1.67e-19 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 92.40 E-value: 1.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 YFIDSLTSIMSILITTVGILVLIysdNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWF 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 167 TRPiAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDlfqiINNLIYKNEINVFFVTLFALLLFcGSVAKSAQFPL 246
Cdd:PRK06277 145 TEE-AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITD----IHNALLVNPTSPVIYGGLLLLIF-GLLYGSGLPPF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 247 HVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK06277 219 HTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 323 TMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITKTAFL 399
Cdd:PRK06277 298 AISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
330
....*....|....*...
gi 2538322907 400 VGTLSLCGIPPFACFWSK 417
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSK 386
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
42-454 |
1.06e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 90.06 E-value: 1.06e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 42 FPSIFLLI-LVMIFSVDRSIDQLNNS------------SIYQYVWSWTINNDLSLEFGYFIDSLTSIMSILITTVGILVL 108
Cdd:CHL00049 17 FPECILIFgLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCI 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 109 IYSDNYMSHDQGYLRFFAYMILFniSMLG---LVTSSNLIQIYVFWELVGMCSYLLIGFwFTRPIAAN-ACQKAFVTNRV 184
Cdd:CHL00049 97 PLSVEYIECTEMAITEFLLFVLT--ATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNeATMKYLLMGGA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 185 GDFCLLLGILGLYWIT-GSLEFRdlfQIINNLIYKNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISA 262
Cdd:CHL00049 174 SSSILVYGFSWLYGLSgGEIELQ---EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 263 LIhAATMVAAGIFLVARLLPlfIVLPAIMNG----IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS 338
Cdd:CHL00049 251 FL-SVTSKVAASALATRIFD--IPFYFSSNEwhllLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGD 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 339 YRAALFHLITHAYSKALLFLGSGSIIhsmevVVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKD 418
Cdd:CHL00049 328 SNDGYASMITYMLFYIFMNLGTFACI-----VLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKL 402
|
410 420 430
....*....|....*....|....*....|....*....
gi 2538322907 419 EILNDSW---LYSPIFaiIACSTAGLTAFYMFRIYLLVF 454
Cdd:CHL00049 403 YLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
139-456 |
1.96e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 89.50 E-value: 1.96e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 139 VTSSNLIQIYVFWELVGMCSYLLIGfwftrpiaanaCQKA----FVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINN 214
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 215 LIYKNEINVFFVTLFALLlfcgsvakSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPaIMNGI 294
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLL--------AGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAP-LWWGV 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 295 ALI--GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFL 358
Cdd:PRK08042 247 ALLvlGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 359 GSGSIIHSmevvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEI------LNDSWLY----- 427
Cdd:PRK08042 327 GAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarll 397
|
330 340
....*....|....*....|....*....
gi 2538322907 428 SPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK08042 398 GPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-456 |
4.82e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 87.78 E-value: 4.82e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 124 FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFCLLLGILGLYWITG 201
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 202 SLEFRdlfqiINNLIYKNEINVFFVTLFALLLFCGSVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL---- 276
Cdd:PRK12561 166 TFTFD-----LAELGAKSYPLALELLLYAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmgg 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 277 -------VARLLPLFIVLPAIMngiALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALF 344
Cdd:PRK12561 233 yalirfnVQMLPDAHVYFAPAL---AILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 345 HLITHAYSKALLFLGSGsiihsmevvVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEI---L 421
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgI 378
|
330 340 350
....*....|....*....|....*....|....*....
gi 2538322907 422 NDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEG 456
Cdd:PRK12561 379 TSSDVYSSTFRTITILLAAvgliLTPIYLLSMLRRVFYG 417
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
133-436 |
4.09e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 83.93 E-value: 4.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 133 ISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQII 212
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 213 NNLIYKNEINVFFVTLF--ALLLFCGSVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFIVLPA 289
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLiiVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 290 ImNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihs 366
Cdd:MTH00196 152 V-NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS-------- 222
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 367 meVVVGYSPTKSQnMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIAC 436
Cdd:MTH00196 223 --IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
45-421 |
2.21e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 82.37 E-value: 2.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 45 IFLLILVMIFsvdrsidqLNNSSIYQYVWSWTINNDLSLEFGYFIdsltsIMSILITTVGILVLIYSDNYMSHDQGYLRF 124
Cdd:MTH00199 33 VLLLIGLIVE--------LNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQSS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 125 FAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLE 204
Cdd:MTH00199 100 PILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 205 FRDlfqiiNNLIYKNEINVFFVTLfaLLLFCGSVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllPL 283
Cdd:MTH00199 180 IQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------SI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 284 FIVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLGS 360
Cdd:MTH00199 240 LVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSICS 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 361 GSIIHSMEVVVGYsptksqnMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00199 316 FSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
138-417 |
6.28e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.17 E-value: 6.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 138 LVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEfrDLFQIINNLIY 217
Cdd:PRK02504 126 LSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALIT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 218 kneiNVFFVTLFALLLFCGSVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVLPAIMNGIA 295
Cdd:PRK02504 204 ----SPSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEQWK 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 296 LI----GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHayskalLFLGSGS----II 364
Cdd:PRK02504 277 LLftalAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvIL 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 365 HSMEvvvgyspTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSK 417
Cdd:PRK02504 351 FSLR-------TGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
6.38e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 78.04 E-value: 6.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 175 CQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQiINNLIYKNEINVFFVTLFALLlfcgsVAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVVSEQTQKWIFLGIFLAM-----AVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 254 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVLPAIMNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 333 AL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEVVVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 2538322907 410 PFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
4.53e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 63.99 E-value: 4.53e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 75 WTINNDLSLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-445 |
6.88e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 71.81 E-value: 6.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 9 WIIpfIPFPVPMLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRSIDqlNNSSIYQYvwswtinNDLSLEFGyf 88
Cdd:PRK12666 7 LII--LPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAVALLASAAA--GGIGVYLL-------GNWPAPFG-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 89 I----DSLTSIMSILITTVGILVLIYSdnyMSHDQGYLRFFayMILFNISMLGL----VTSsNLIQIYVFWELVGMCSY- 159
Cdd:PRK12666 74 IvlvlDRLSALMLLLTALLALAALLYA---LAGWDRAGPHF--HALFQFQLMGLngafLTG-DLFNLFVFFEVLLAASYg 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 160 -LLIGFWFTRpiaanacQKA----FVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNeinvffVTLF---AL 231
Cdd:PRK12666 148 lLLHGSGRAR-------VRAglhyVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAAD------RALLeagAA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 232 LLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF----IVLPAIMNGIALI--GIITVVL 304
Cdd:PRK12666 215 LLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeAGASAGFGQDWLLpgGLATLAF 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 305 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSIIHSMEVv 370
Cdd:PRK12666 293 GAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVTPEL- 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 371 vgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILN---------DSWLY------SPIFAIIA 435
Cdd:PRK12666 372 --YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIA 449
|
490
....*....|
gi 2538322907 436 CSTAGLTAFY 445
Cdd:PRK12666 450 LTRAGIRLFW 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-409 |
8.03e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 65.08 E-value: 8.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 74 SWTINNDLSLEFGYFIDSLTSI------MSILITTVGILVLIYSDNYMshdqgYLRFFAYMILFNISMLGLVTSSNLIQI 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 148 YVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIinnliykneiNVFFVT 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI----------KLPLSI 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 228 LFALLL--FCGSVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNG-IALIGIITVV 303
Cdd:MTH00204 208 QKWLLVgfFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPlIVMLSVIAVI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 304 LGATLAIAQKDIKKNLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQN 380
Cdd:MTH00204 288 YGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRL 358
|
330 340
....*....|....*....|....*....
gi 2538322907 381 MVLMGGLTKHVPITKTAFLVGTLSLCGIP 409
Cdd:MTH00204 359 IKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-478 |
8.68e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 64.96 E-value: 8.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 20 MLIGVGLLLFPTATKNLRRVWAFPSIFLLILVMIFSVDRSIDQLNNSSIYQyvwswtinndlsleFGYFIDSLTSIMSIL 99
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 100 ITTVGILVLIYSDNYMsHDQGYLRFFAYMILFNISMLGLV---TSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQ 176
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 177 KAFVTNRVGDFCLLLGILGLYWITGSLEFrdlfqiinNLIYKNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDA-ME 255
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL--------YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 256 GPTpisalihAATMVAAGIFLVA---RLLPLFIVLPAIMNGIALIGIITVVLGATLA----IAQKDIKKNLAYSTMSQLG 328
Cdd:MTH00206 219 APV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 329 YMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmevvVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLS 404
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2538322907 405 LCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFLNFNGKKNRSFYSISL 478
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFL 435
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
128-490 |
1.72e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 63.06 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 128 MILFNI-SMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLefr 206
Cdd:MTH00200 9 FILSLGlGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 207 DLFQIINNLIykneinvFFVTLFALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagiFLVARLLPLFIV 286
Cdd:MTH00200 85 GISEMLGPLS-------ETLILLALAL------KLGLAPGHFWVPDVLQGLSLQTGLI----------LSTWQKLAPFAL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 287 LPAI-----MNGIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLIThayskallflgsg 361
Cdd:MTH00200 142 LIQLapalnSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLY------------- 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 362 sIIHSMEVVVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGL 441
Cdd:MTH00200 209 -VIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSL 287
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2538322907 442 TAFYMfriyllvfegYLNVHFLNFNGKKNRSFYSISLWGKKEVKHKLKN 490
Cdd:MTH00200 288 LSLFF----------YLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVG 326
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
4.81e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 62.89 E-value: 4.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 94 SIMSILITTVGILVLIYSDNYmSHDQGYLrffayMILFNISMLGLV---TSSNLIQIYVFWELVGMCSYLLIGfwftrpI 170
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWL-----SSLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 171 AANACQKAFVTNRVGDFCLLLGILGLYW---ITGSLEFrdlfqiinnliykneinVFFVTLFALLLFC-GSVAKSAQFPL 246
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF-----------------SYLPSPVPLILASfGFIIKMGMMPF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 247 HV--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNGIAL--IGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK06459 178 LVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTIlaIGAFSILFGALYAYVSENVKGLLAFS 257
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2538322907 323 TMSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 363
Cdd:PRK06459 258 TIENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-459 |
7.37e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 62.03 E-value: 7.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 124 FFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFCLLLGILGLYWITG 201
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALAMAFYGD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 202 SLEFRdlfqiINNLIYKNeinvfFVTLFALLLFCGSV----AKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV 277
Cdd:PRK02546 194 TPTFD-----MTALAAKD-----FGLGFQLLCYAGLLiaygVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLK 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 278 ------------------ARLLPLFIVLpaimngialiGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSY 339
Cdd:PRK02546 258 mggyallrmnagmlpdahAQFAPLLIVL----------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSF 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 340 RA-----ALFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACF 414
Cdd:PRK02546 326 TDlgtsgAMLQMISHGLIGASLFFLVGAT---------YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGF 396
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2538322907 415 WSKDEI---LNDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEGYLN 459
Cdd:PRK02546 397 VAELMVfvgFATSDAYTLPFRVVVVFLAAvgviLTPIYLLSMLREIFFGPEN 448
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
2.78e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 60.26 E-value: 2.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVLPaimngialIGIITVVLGATLAIAQKDIKKN 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVITSKLLLS--------VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 319 LAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNMVLMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 387 LTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDS----WLYS-PIF---AIIACSTAGLTAFYMFRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIRI 533
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
42-450 |
9.52e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 58.21 E-value: 9.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 42 FPSIFLLILVMIFSVDR-----SIDQLNNSSIYQYVWSWTINNDLSLEFgYFIDSLTSIMSILITTVGILVLIYSDNYMS 116
Cdd:MTH00014 6 MPLISLLLLPLIKYPWSwaltfSTLLLLSLFTLLNLYPMSAPYSMFTES-LSSDMLSAPLITLTLWITALMILASFKIFQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 117 HDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGL 196
Cdd:MTH00014 85 NNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 197 YWitgslEFRDLFQIINNLiykNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIF 275
Cdd:MTH00014 165 FY-----TNNSLSMLMSSM---EPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGIL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 276 L------VARLLPLF----IVLPAIMNGIALIGIITVVLgatLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAA 342
Cdd:MTH00014 230 LklggygLLRMSSLFmhinKSLSAPFSSISLVGAVITSL---ICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 343 LFHLITHAYSKALLFLGSGSIihsmevvvgYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILN 422
Cdd:MTH00014 307 LAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLT 377
|
410 420
....*....|....*....|....*...
gi 2538322907 423 DSWLYSPIFAIIACSTAGLTAFYMFRIY 450
Cdd:MTH00014 378 SILSSSLSTAILLAITSFLAAAYSLFLY 405
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
1.61e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 57.48 E-value: 1.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 87 YFIDSLTSIMSILITTVGILVLIYSDN--------YMSHDQGYLrFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 159 YLLIGFWfTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIInnliyKNEINVFFVTLFALLLFCGSV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI----VLPAIMNGIALIGIITVVLGATLAIAQKD 314
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIgyetIKTAITNFIRPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 2538322907 315 IKKNLAYSTMSQLGYMML 332
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-466 |
2.53e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.43 E-value: 2.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 222 NVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMngiaLIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 382 VLMGGLtkhvpitktaflvgtLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTA--FYMFRIYLLVFEGYLN 459
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
....*..
gi 2538322907 460 VHFLNFN 466
Cdd:MTH00144 300 KKSNSSK 306
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-450 |
3.85e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.60 E-value: 3.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 175 CQKAFVTNRVGDFCLLLGILGLYWITGSLEFrdlfQIINNLIYKNEINVFFVTLFalllFCGSVAKSAQFPLHVWLPDAm 254
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY----QALCCLKIEKELQYFIFLGF----FLSLAIKIPKIPFHIWLPQA- 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 255 egptpisaliHAATMVAAGIFLVARLLPL----FI--VLPAIMNG-------IALIGIITVVLGATLAIAQKDIKKNLAY 321
Cdd:MTH00217 233 ----------HVEAPVAGSVILAGVLLKLggygFIrfSWPLLPEAseyfsplIQTLSLLAIIYGSLTTCRQVDLKRIIAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 322 STMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGsgsiihsmeVVVGYSPTKSQNMVLMGGLTKHVPITKTAF 398
Cdd:MTH00217 303 SSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA---------VTFLYERHHTRLIKYYRGMVITMPLFGILM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2538322907 399 LVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIY 450
Cdd:MTH00217 374 LLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-423 |
4.38e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 52.52 E-value: 4.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 245 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPLFIVLpaimngiaLIGIITVVLGATLAIAQKDIKKNLAY 321
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLNPTLLL--------TLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 322 STMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMEVvvgyspTKSQNMVLMggLTKhVPITKTAFLVG 401
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTS--WTK-SPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 2538322907 402 TLSLCGIPPFACFWSKDEILND 423
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
130-466 |
5.43e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 53.03 E-value: 5.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 130 LFNISML-------GLVTSSNLIQIYVFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFCLLLGIL--GLYw 198
Cdd:CHL00011 113 LFYFLMLamysgqiGLFSSRDLLLFFIMWELELIPVYLLLSMWggKKRLYSAT---KFILYTAGGSIFLLIGVLgmGLY- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 199 itGSLEFRDLFQIINNLIYKNEINVFFVTLFalllFCGSVAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLV 277
Cdd:CHL00011 189 --GSNEPTLNFETLANQSYPVALEILFYIGF----LIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 278 A----------RLLP--LFIVLPAIMngiaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSY-----R 340
Cdd:CHL00011 256 MgayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglN 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 341 AALFHLITHAYSKALLFLGSGSiihsmevvvGYSPTKSQNMVLMGGLTKHVP---ITKTAFLVGTLSLCGIPPFAC---- 413
Cdd:CHL00011 330 GAILQIISHGFIGAALFFLAGT---------SYDRIRLVYLDEMGGIAIPMPkifTMFSSFSMASLALPGMSGFVAeliv 400
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2538322907 414 FWSkdeiLNDSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEGYLNVHFLNFN 466
Cdd:CHL00011 401 FFG----IITSQKYLLMPKILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSY 453
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
7.87e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 51.60 E-value: 7.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 222 NVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLpaimngiALIGIIT 301
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGL-------LICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEVVVGYSPTKSQNM 381
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 382 VLmggltkhvpitktaFLVGTLSLCGIPPFACFWSKDEILNdSWLYSPIFAIIACSTAGlTAFYMFRIYLLVFEGYLNVH 461
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILS-TCFSLYYYLSLAYKSLILSN 290
|
250
....*....|....*..
gi 2538322907 462 FLNFNGKKNRSFYSISL 478
Cdd:MTH00197 291 WMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
1.50e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 51.46 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 88 FIDSLTSIMSILITTVGILVLIYSDNYMS-----HDQGYLrffAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLI 162
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 163 GFWFTRPIAANACQK-AFVTnRVGDFCLLLGILGLYWITGSL--EFRDLFQIINNLIYKNEInVFFVTLFALLLfcgsva 239
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLslILLELMSPMQLMTYTNKI-WWLACLLAFMV------ 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 240 KSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF------IVLPAIMngIALIGIItvvLGA 306
Cdd:MTH00068 206 KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtplskeLSYPFII--LALWGVL---MTS 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 307 TLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSGSiihsmevvvgYSPTKSQNMV 382
Cdd:MTH00068 274 LICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLL 343
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2538322907 383 LMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVH 461
Cdd:MTH00068 344 LLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
144-466 |
2.28e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.72 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 144 LIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLfQIINNLIYKNEINV 223
Cdd:MTH00127 116 IIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADK 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 224 FFVT--LFALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVLPAIMNG----IALI 297
Cdd:MTH00127 195 LWWAgcLLAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYpfiiLALW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 298 GIItvvLGATLAIAQKDIKKNLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFLGSGSiihsmevvvGYS 374
Cdd:MTH00127 269 GII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFCLANT---------NYE 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 375 PTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:MTH00127 337 RTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQ 416
|
330
....*....|..
gi 2538322907 455 EGYLNVHFLNFN 466
Cdd:MTH00127 417 RGPLPDHIIALN 428
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-434 |
5.39e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 49.45 E-value: 5.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 69 YQYVWSWTINNDLslefgYFIDSLTSIMSILITTVGILVLIYSdNYMSHDQGYLRFFAYMILFNISMLGLV-TSSNLIQI 147
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-QKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 148 YVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFrdlfqIINNLIYKNEINVFFVT 227
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLSSMGLWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 228 LFALLLFcgsVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFivlpAIMNGIALIGII 300
Cdd:MTH00150 156 LLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVF----SLSSSSFSIFLI 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 301 TV-----VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAY-SKALLFLGSGSiihsmevvv 371
Cdd:MTH00150 222 SLslwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT--------- 292
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2538322907 372 gYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAII 434
Cdd:MTH00150 293 -YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVP 354
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-387 |
1.85e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.67 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 82 SLEFGYFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 162 IGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFRDLFQIINNLIYKNEINVFFVTLFALllfcgsvaKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLV--------KL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVLPAIMNGIALIGIITVVLGATLAIAQK 313
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQV 272
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 314 DIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAY-SKALLFLGSgsiihsmevvVGYSPTKSQNMVLMGGL 387
Cdd:MTH00205 273 DLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFALAN----------VNYERTNSRSMLMNKGV 340
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
133-433 |
5.26e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 46.08 E-value: 5.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 133 ISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLefrDLFQII 212
Cdd:MTH00041 15 LGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW---SINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 213 NNLiykneinVFFVTLFALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVLPAIMN 292
Cdd:MTH00041 91 NTL-------SSIIITLALAL------KLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISNL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 293 G----IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS-GSIIHSM 367
Cdd:MTH00041 149 LnsniLILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNnFSLSTLS 228
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2538322907 368 EVvvgysptksqnmvlmGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSK-----DEILNDSWLYSPIFAI 433
Cdd:MTH00041 229 HL---------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-466 |
1.17e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.77 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 230 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivlpAIMNGIALIGIITVVLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 310 IAQKDIKKNLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEVVVGYSPTKSQNMvlMGGLT 388
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 389 KHVPITKTAFLVGTLSLCGIPPFACF---WSKDEILNDSWLYSPIFAIIACSTAGLtaFYMFRIYLLVFegYLNVHFLNF 465
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNLIFNFM--YLSPTFSSL 306
|
.
gi 2538322907 466 N 466
Cdd:MTH00011 307 K 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-434 |
1.17e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.49 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 222 NVFFVTLFALLLFCGSVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVLPAIMngIALIGIIT 301
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGEEI--LLFLGIIT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSmevvvgyspT 376
Cdd:PRK12664 212 AIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR---------T 282
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2538322907 377 KSQNMVLMGGLTKhVPITKTAFLVGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK12664 283 RKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
45-339 |
7.60e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.83 E-value: 7.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 45 IFLLILVMIFSVDRSIDQLNNSSIYQYVWSWTINNDLSLEFGYFI--DSLTSIMSILITTVGILVLIYSDNYMSHDQGYL 122
Cdd:MTH00163 8 LLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFglDLLSFGLILLSFWICMLMILSSESVYKKNNYSN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 123 RFFAYMILFNISMLGLVTSSNLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGS 202
Cdd:MTH00163 88 LFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 203 LEFrdlfqIINNLIYKNEINVFFVTLFALLLfcgsvaKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVARLL 281
Cdd:MTH00163 168 LSF-----FLLNFFGSLNFLWYLSMILAFLV------KMPMFFVHLWLPKAhVEAPVSGS-MILAGVLLKLGGYGLLRVM 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2538322907 282 PLFIVLPAIMNGIAL-IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00163 236 SFFSKLGLKFNYIWIsISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSY 294
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
78-410 |
8.29e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 42.57 E-value: 8.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 78 NNDLSLEFG--YFIDSLTSIMSILITTVGILVLIYSDNYMSHDQGYLR--FFAYMILFNISMLGLVTSSNLIQIYVFWEL 153
Cdd:MTH00110 45 PNDNSLNFSllFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEPLTRKklYITMLILLQLFLIMTFTATELIMFYILFEA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 154 VGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGLYWITGSLEFrdlfqIINNLIYKNEINVFFVTLFALLL 233
Cdd:MTH00110 125 TLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNF-----LLLQLWAQPLPNSWSNNLLWLAC 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 234 FCGSVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPL------FIVLPAIMngIALIGII 300
Cdd:MTH00110 200 MMAFMVKMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGMI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 301 tvvLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSiihsmevvvGYSPTK 377
Cdd:MTH00110 271 ---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERIH 338
|
330 340 350
....*....|....*....|....*....|...
gi 2538322907 378 SQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPP 410
Cdd:MTH00110 339 SRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
208-479 |
1.65e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 41.35 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 208 LFQIINNLIYKNEINVFFVTLFALLLFcgsvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVL 287
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLL----LKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNFII 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 288 paimngiaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLIthaYSkallflgsgsiIHSM 367
Cdd:MTH00160 148 --------IIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YS-----------IISL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 368 EVVVGYSPTKSQNMVLMGGLTKHVPITKTAFLVGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACSTagLTAF 444
Cdd:MTH00160 206 SIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLY 283
|
250 260 270
....*....|....*....|....*....|....*
gi 2538322907 445 YMFRIYLLVFEGYLNVHFLNFNGKKNRSFYSISLW 479
Cdd:MTH00160 284 FYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
39-330 |
2.48e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.11 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 39 VWAFpSIFLLILVMIFSvdrsIDQLNNSsiyqyvWSWTINNdLSLEFGyfIDSLTSIMSILITTVGILVLIYSDNYMSHD 118
Cdd:MTH00044 23 LWPI-SISQSSLISLLS----LFLLNNH------WSSSWHN-LSLSLA--TDSLSSPLIILSCWLAPLSLLASINHLSNN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 119 QGYL-RFFAYMILFNISMLGLVTSS-NLIQIYVFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFCLLLGILGL 196
Cdd:MTH00044 89 SPNNqRTFISLIIIILTALIITFSSlELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2538322907 197 YWITGSLEFrdlfqIINNLIYKNEINVFFVTLFALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 275
Cdd:MTH00044 169 YSSSSSLSI-----PLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2538322907 276 LVARLLPLFIvLPAIMNgIALIGIITVVLGATLA----IAQKDIKKNLAYSTMSQLGYM 330
Cdd:MTH00044 243 GLIRLINLFS-LPSANN-ISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLV 299
|
|
| |
