|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
3-574 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 655.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 3 LSICFVSFFFLFLLGVIFSLLGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAG 82
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 83 DINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMIN 162
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 163 FGGWNFVYYLDFLSSSFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSF 242
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 243 LSSLLLLVSG-ITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMG 321
Cdd:MTH00165 241 FFSKFLLLISlLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 322 DSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 402 CGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGYTLAGFSFSDV 481
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 482 LFSIRNYKYTTFVGSMWFMPFFSTYGVSSFPLSFGYFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLGF 561
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 2506850270 562 FMMWVVTLVFVFI 574
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
18-573 |
1.24e-162 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 475.29 E-value: 1.24e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 18 VIFSLLGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFV 97
Cdd:MTH00209 14 LFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 98 VSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYyldfLSS 177
Cdd:MTH00209 94 LSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFY----LNF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 178 SFEMG-LISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GIT 254
Cdd:MTH00209 170 NSNLGsVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLlgSLT 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 255 MFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVS 334
Cdd:MTH00209 250 TLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWY 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 335 FIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFE 414
Cdd:MTH00209 330 QMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSF 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 415 EVNYNMSYGMIGLLIMSIFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGYTLAGFSFsdvlFSIRNYKYTTFV 494
Cdd:MTH00209 410 DQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKGYKVNYFL 485
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2506850270 495 GSMWFMPFFSTYGVSSFPLSFGYFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLgFFMMWVVTLVFVF 573
Cdd:MTH00209 486 SQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFV-TFMMLILLGVILF 563
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
18-573 |
2.85e-159 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 466.63 E-value: 2.85e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 18 VIFSLLGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFV 97
Cdd:MTH00151 16 VFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 98 VSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDFlss 177
Cdd:MTH00151 96 LSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDF--- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 178 sFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GITM 255
Cdd:MTH00151 173 -KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFisLLTL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 256 FMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSF 335
Cdd:MTH00151 252 LMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 336 IPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEE 415
Cdd:MTH00151 332 LPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSD 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 416 VNYNMSYGMIGLLIMSIFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGYTLAGFSFSDVLFSIRNYkyttFVG 495
Cdd:MTH00151 412 EDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSF----FFS 487
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2506850270 496 SMWFMPFFSTYGVSSFPLSFGYFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLGFFMMWVVTLVFVF 573
Cdd:MTH00151 488 SMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
23-573 |
1.52e-149 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 442.28 E-value: 1.52e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 23 LGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFF 102
Cdd:MTH00207 24 LSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNM 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 103 LIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDflssSFEMG 182
Cdd:MTH00207 104 LIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQ----TDMNN 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 183 LISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSS--LLLLVSGITMFMAGL 260
Cdd:MTH00207 180 YIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFnpALLLTASLTMLMAGL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 261 GANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTS 340
Cdd:MTH00207 260 SAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 341 SCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYNM 420
Cdd:MTH00207 340 SCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSL 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 421 SYGMIGLLIMSIFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGYTLAGFSFSDVLFSIRNYKYTTFVGSMWFM 500
Cdd:MTH00207 420 TTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFL 499
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2506850270 501 PFFSTYGVSSFPLSFGYFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLGFFMMWVVTLVFVF 573
Cdd:MTH00207 500 VPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-575 |
1.48e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 347.71 E-value: 1.48e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 20 FSLLGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVS 99
Cdd:MTH00211 43 LIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 100 MFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLT-VLSNRVGDVALLMVIAWM-INFGGWNFvyyLDFLSS 177
Cdd:MTH00211 123 MLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLlLNLNSWEI---SQLFIL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 178 SFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GITM 255
Cdd:MTH00211 200 NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLlgALTM 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 256 FMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSF 335
Cdd:MTH00211 280 LFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKN 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 336 IPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEE 415
Cdd:MTH00211 360 LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINE 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 416 VNYNMSYGMIGLLIMSIFGGSSLMWLICPS-PSVICLPWYLSLLTLFVLMVGGWLGYTLAGFSFSDVLFSirnykYTTFV 494
Cdd:MTH00211 440 NYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTS-----TLSFS 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 495 GSMWFMPFFSTYGVSSFPLSFG-YFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLGFFMMWVVTLVFVF 573
Cdd:MTH00211 515 NMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
..
gi 2506850270 574 IC 575
Cdd:MTH00211 595 LL 596
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
50-473 |
8.54e-93 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 296.68 E-value: 8.54e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 50 MTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY 129
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 YQNVKSYN-AGMLTVLSNRVGDVALLMVIAWMIN-FGGWNFVYYL---DFLSSSFEMGLISGFVVLAAMTKSAQVPFSSW 204
Cdd:COG1009 154 WYEKPSARrAARKAFLVTRVGDLGLLLGILLLGAiAGTLNFSELLaaaPTILSSPLLTLILLLLLLGAFGKSAQFPLHFW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 205 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GITMFMAGLGANFEYDLKSIIALSTLSQLGL 282
Cdd:COG1009 234 LPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIigAITALFAALIALAQTDIKRVLAYSTVSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 283 MIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSK 362
Cdd:COG1009 314 MFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 363 DYILD-MVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGGSSLMWL 441
Cdd:COG1009 393 EAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGL 472
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2506850270 442 ---------ICPSPSVICLPWYLSLLTLFVLMVGGWLGYTL 473
Cdd:COG1009 473 legllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
50-466 |
7.69e-89 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 286.29 E-value: 7.69e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 50 MTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY 129
Cdd:MTH00004 78 ISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 YQNVKSYN-AGMLTVLSNRVGDVALLMVIAWM-INFGGWNFVYYLDFLSSSF--EMGLIsgfvvLAAMTKSAQVPFSSWL 205
Cdd:MTH00004 158 WSGRAEANtAALQAIIYNRIGDIGLILSMAWLaMTLNTWEIQQLFSPTQTPTlpLLGLI-----LAATGKSAQFGLHPWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 206 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLM 283
Cdd:MTH00004 233 PAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLqnNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLM 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 284 IMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKD 363
Cdd:MTH00004 313 MVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKD 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 364 YILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGGSSLMWLIC 443
Cdd:MTH00004 393 TIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTIL 472
|
410 420
....*....|....*....|....
gi 2506850270 444 PS-PSVICLPWYLSLLTLFVLMVG 466
Cdd:MTH00004 473 PTkTPPMTMPTTTKLAALIVTILG 496
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
18-574 |
1.44e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 283.79 E-value: 1.44e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 18 VIFSLLGIYFVLFNFTYFLDWgivmlNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFV 97
Cdd:MTH00208 74 LIWILLGCPNINISLSNWLSN-----TLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 98 VSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGML-TVLSNRVGDVALLMVIAW-MINFGGWNF--VYYLD 173
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALqAVIYNRIGDIGIILFLSLsLINFNSWNLneILSLN 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 174 FLSSSFEMGLISGfVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS-- 251
Cdd:MTH00208 229 NSNSFLINILLFG-ILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIlg 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 252 GITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGG 331
Cdd:MTH00208 308 SLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 332 LVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSF 411
Cdd:MTH00208 388 LSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLS 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 412 SFEEVNYNMSYGMIGLLIMSIFGGSSLMWLICPSPSVIcLPWYLSLLTLFVLMVGgwlgytlAGFSFSDVLFSIRNYKYT 491
Cdd:MTH00208 468 PISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIG-------AAFSFSFLLSLSSNPINS 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 492 TFVGSMWFMPFFSTYGVSSFplSFGYFSMSVF------DFGWLESFGGQGFYWFLVSLGKCSQWFQYNSLSVFLGFFMMW 565
Cdd:MTH00208 540 NFFSFLSNQWFFVNISHSII--ISFSFFTSLFgstrtlDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLL 617
|
....*....
gi 2506850270 566 VVTLVFVFI 574
Cdd:MTH00208 618 FLLILTLSL 626
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
36-477 |
9.14e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 280.64 E-value: 9.14e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 36 LDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLG 115
Cdd:MTH00066 62 TSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 116 WDGLGLVSYCLV-IYYQNVKSYNAGMLTVLSNRVGDVALLMVIAW-MINFGGWNFVYYldFLSSSFEMGLISGFVvLAAM 193
Cdd:MTH00066 142 WEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-LAAA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 194 TKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGANFEYDLKSI 271
Cdd:MTH00066 219 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLenNQTALTICLCLGALTTLFTAACALTQNDIKKI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 272 IALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALC 351
Cdd:MTH00066 299 VAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALT 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 352 GMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYNMSYGMIGLLIMS 431
Cdd:MTH00066 379 GTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGS 458
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2506850270 432 IFGGSSLMWLICPS-PSVICLPWYLSLLTLFVLMVGGWLGYTLAGFS 477
Cdd:MTH00066 459 IIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKIT 505
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
50-474 |
1.14e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 275.19 E-value: 1.14e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 50 MTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-I 128
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 129 YYQNVKSYNAGMLTVLSNRVGDVALLMVIAW-MINFGGWNF--VYYLDFLSSSFE-MGLIsgfvvLAAMTKSAQVPFSSW 204
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLqqIFMLNPNNSNLPlMGLL-----LAATGKSAQFGLHPW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 205 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGL 282
Cdd:MTH00108 233 LPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMenNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 283 MIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSK 362
Cdd:MTH00108 313 MMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 363 DYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGGSSLMWLI 442
Cdd:MTH00108 393 DLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNI 472
|
410 420 430
....*....|....*....|....*....|...
gi 2506850270 443 CP-SPSVICLPWYLSLLTLFVLMvggwLGYTLA 474
Cdd:MTH00108 473 PPtTIPQMTMPLYLKLTALAVTI----LGFILA 501
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
79-400 |
6.77e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 265.54 E-value: 6.77e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 79 YMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTVLSNRVGDVALLMVI 157
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVIYNRVGDIGLILAM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 158 AWM-INFGGWNfVYYLDFLSSSFEM-----GLIsgfvvLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYL 231
Cdd:MTH00137 191 AWMaTNLNSWE-IQQIFALSKDFDLtlpllGLI-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 232 LIRFSPAF-NSFLSSLLLLVSG--ITMFMA--GLGANfeyDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFK 306
Cdd:MTH00137 265 LIRLSPLMeNNQTALTTCLCLGalTTLFTAtcALTQN---DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFK 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 307 ALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLST 386
Cdd:MTH00137 342 AMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIAT 421
|
330
....*....|....
gi 2506850270 387 GLTVCYSFRLFYYV 400
Cdd:MTH00137 422 SFTAVYSLRVVFFV 435
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
47-435 |
4.12e-80 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 263.94 E-value: 4.12e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 47 SVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCL 126
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 127 VIYYQNVKSYN-AGMLTVLSNRVGDVALLMVIAWMI-NFGGWNFVyylDFLSSSFEMGLISGFVV--------LAAMTKS 196
Cdd:PRK06590 155 IGFWYKKPSAGaAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYD---EVFAAAPQFFGLGWSALtliclllfIGAMGKS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 197 AQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GITMFMAGLGANFEYDLKSIIAL 274
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIvgAVTALFAAFIGLVQTDIKRVLAY 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 275 STLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMP 354
Cdd:PRK06590 312 STMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIP 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 355 FLAGFYSKDYILDmVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFEEVNYnMSYGMIGLLIMSIFG 434
Cdd:PRK06590 392 PFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHHPHESPAV-MTLPLIVLAVLSVFA 469
|
.
gi 2506850270 435 G 435
Cdd:PRK06590 470 G 470
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
17-435 |
4.78e-80 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 263.37 E-value: 4.78e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 17 GVIFSLLGIYFVLFNFT----------YFLDWgiVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINI 86
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFlngegeaftqSLFPW--ISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGY 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 87 VRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMIN-FG 164
Cdd:TIGR01974 114 SRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFG 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 165 GWNFVYYLDFLSSSFE--MGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSF 242
Cdd:TIGR01974 194 TLNFQEVFALAPGAFFsaLTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELS 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 243 LSSLLLLVS--GITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFM 320
Cdd:TIGR01974 274 PTALYLVTIigAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 321 GDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYV 400
Cdd:TIGR01974 354 HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMV 433
|
410 420 430
....*....|....*....|....*....|....*
gi 2506850270 401 FCGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGG 435
Cdd:TIGR01974 434 FHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAG 468
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
17-574 |
2.24e-76 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 253.85 E-value: 2.24e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 17 GVIFSLLGIYFVLFNF--TYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVL 94
Cdd:MTH00020 39 SLSWSFLIFYEILFNSstTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 95 LFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTVLSNRVGDVALLM-VIAWMINFGGWNF--VY 170
Cdd:MTH00020 119 LFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLaMFLLWDRFGSLDFssVF 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 171 YLDFLSSSFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLV 250
Cdd:MTH00020 199 NMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVT 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 251 S--GITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRF 328
Cdd:MTH00020 279 IvgSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 329 MGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNF- 407
Cdd:MTH00020 359 MGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLk 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 408 -SSSFSFEEVNYNMSYGMIGLLIMSIFGG---SSLMWLICPSPSVIcLPWYLSLLTLFVLMVGGWLGYTLAGFS--FSDV 481
Cdd:MTH00020 439 kAVFFHLHEGDWNLLLPLGILALGSIFVGylaKEMIWSFQITLPPI-VPLSIKLLPVFLSLGGIGLVIILYFYSskTFRV 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 482 LFSIRNYKYTTFVGSMWFMPFFSTYGVSSFPLSFGYF-SMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQYNslSVFLG 560
Cdd:MTH00020 518 PFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSG--LVFNY 595
|
570
....*....|....
gi 2506850270 561 FFMMWVVTLVFVFI 574
Cdd:MTH00020 596 ALVILIGVAIFIWG 609
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
52-573 |
5.90e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 236.83 E-value: 5.90e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 52 FLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-IYY 130
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 QNVKSYNAGMLTVLSNRVGDVALLMVIAWMIN-FGGWNFVYYLDFLSSSFE---MGLISGFVVLAAMTKSAQVPFSSWLP 206
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 207 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNS--FLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMI 284
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGspLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 285 MTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDY 364
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 365 ILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNF--SSSFSFEEVNYNMSYGMIGLLIMSIFGG------- 435
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSkkEVFIGVHESSWNITFPLLLLAFGSIFVGylgkevv 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 436 -SSLMWLICPSpSVICLPWYLSLLTLFVLMVgGWLGYTLAGFSFSDVLFSIRNYKYTTFVGSMWFMPFFSTYGVSSFPLS 514
Cdd:MTH00210 476 lSNVIPPIVPN-SIKMIPLLFSLLGALLAFV-IYNSMVFLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWK 553
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 515 FGYF-SMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQynSLSVFLGFFMMWVVTLVFVF 573
Cdd:MTH00210 554 FGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQ--SGMVFNYALIMIIFTTLFIS 611
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
47-404 |
6.52e-66 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 227.21 E-value: 6.52e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 47 SVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCL 126
Cdd:PRK07376 82 HLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 127 V-IYYQNVKSYNAGMLTVLSNRVGDVALLMVIA---WMInfGGWNFVYYLDFLSSSFEMGLISG--------FVVLAAMT 194
Cdd:PRK07376 162 VgFWYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWAT--GSFDFDGIADRLSELVSSGAVSGwlalllciLVFLGPMA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 195 KSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNS--FLSSLLLLVSGITMFMAGLGANFEYDLKSII 272
Cdd:PRK07376 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQfpAVMTVIAWTGAITAFLGASIALTQNDIKKGL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 273 ALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGD--------SQDIRFMGGLVSFIPFTSSCLM 344
Cdd:PRK07376 320 AYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFL 399
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2506850270 345 VSNFALCGMPFLAGFYSKDYILDmvsmdyvNVF-SFALL----FLSTGLTVCYSFRLFYYVFCGD 404
Cdd:PRK07376 400 IGCLAISGIPPFAGFWSKDEILG-------AAFeANPALwfvgFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
19-464 |
3.90e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 210.93 E-value: 3.90e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 19 IFSLLGIYFVLFNFTYFL---DWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLL 95
Cdd:MTH00095 5 IFLILFFFFFLLLFILFLpfmKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 96 FVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGgwnfvyyLDFL 175
Cdd:MTH00095 85 FVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-------YYFF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 176 SSSFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PAFNSFLSSLLLLVSGIT 254
Cdd:MTH00095 158 SFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSyLILNMNVMKIMLLIGLFT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 255 MFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVS 334
Cdd:MTH00095 238 MFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGN 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 335 FIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSFSFe 414
Cdd:MTH00095 318 LPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSS- 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2506850270 415 evNYNMSYGMIGLLIMSIFGGSSLM-WLICPSPSVICLPWYLSLLTLFVLM 464
Cdd:MTH00095 397 --SVLMNFLSLMLVFFSVFFLWWLNfNLLNLPSLFLYLDFYVPLFYLFMIM 445
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
52-368 |
1.19e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 187.86 E-value: 1.19e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 52 FLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQ 131
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 132 N-VKSYNAGMLTVLSNRVGDVALLM---------------------VIAWMINFGGWNFVYYLDFLSSSFEMGLIsgfVV 189
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILgmvliyktigsldfltfnggsVGSGIMDRGYYGGGAYESPLAPFAIIGIL---LL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 190 LAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNS--FLSSLLLLVSGITMFMAGLGANFEYD 267
Cdd:MTH00032 233 IGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKapLTLLIITIFGALTAFFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 268 LKSIIALSTLSQLGLMIMTISV-GLSGLAFFHLLTHALFKALLFMCAGGVIHFMG-DSQDIRFMGGLVSFIPFTSSCLMV 345
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLI 392
|
330 340
....*....|....*....|...
gi 2506850270 346 SNFALCGMPFLAGFYSKDYILDM 368
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-385 |
3.77e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 177.51 E-value: 3.77e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 106 SPNMISILLGWDGLGLVSYCLVIYY-QNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGW----NFVYYLDFLSSSFE 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 181 MGLISGFVVLAAMTKSAQVPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPAF---NSFLSSLLLLVSGITMF 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlpsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 257 MAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSG---LAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLV 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2506850270 334 SFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
51-400 |
4.01e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 167.63 E-value: 4.01e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYY 130
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 QNVKSYNAGMLTVLSNRVGDVALLMVIAWM-INFGGWNFVYYLDFLS--SSFEMGLISGFVVLAAMTKSAQVPFSSWLPA 207
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 208 AMA-APTPVSALVhSSTLVTAGVYLLIR-----FSPAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLG 281
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRvltllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 282 LMIMTISV----GLSGlAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLA 357
Cdd:COG0651 310 YILLGLGLgtplGLAG-ALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2506850270 358 GFYSKDYILdMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYV 400
Cdd:COG0651 388 GFVSKWLLL-QAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-403 |
2.69e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 171.91 E-value: 2.69e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYY 130
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 QNVKSYNAG--M-LTVLSnrVGDVALLmviAWMINFGgwNFV--YYLDFLSSSFEM-------GLISGFVVLAAMTKSAQ 198
Cdd:PRK12648 151 HHRADARRGarMaLTVTG--AGGLALL---AGVLLLG--HIVgsYDLDVVLAAGDLirahplyPPALVLILLGAFTKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 199 VPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSG--ITMFMAGLGANFEYDLKSIIALST 276
Cdd:PRK12648 224 FPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAglITLLLGAYFALFQHDLKGLLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 277 LSQLGLMIMTISVGlSGLA----FFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCG 352
Cdd:PRK12648 304 ISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHETG-TRDMRRLSGLRRLMPITATLAMVAAAAMAG 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2506850270 353 MPFLAGFYSKDYILDmVSMDYVNVFSFALLF-----LSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK12648 382 VPLLNGFLSKEMFFA-ETLDTHLLGSLDWLLpvaatLAGAFSVAYSLRFIHDVFFG 436
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
44-396 |
5.49e-44 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 167.91 E-value: 5.49e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 44 NGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVS 123
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 124 YCLVIyyQNVKSYNAG-MLTVLSNRVGDVALLMVIAWMINFGGWNFVYylDFLSSSF---EMGLISGFVVL---AAMTKS 196
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAAVAIAATQTGTTSLS--GILHSDVwaeKPGLTTVVAVLiavAAFTKS 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 197 AQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAF-NSFLSSLLLLVSG-ITMFMAGLGANFEYDLKSIIAL 274
Cdd:PRK12650 223 AQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAVWNWLLIIVGmITALMGAVFAVQKTDLKKLTAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 275 STLSQLGLMIMTISVGLS---GLAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALC 351
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMA 381
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2506850270 352 GMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGL----TVCYSFRL 396
Cdd:PRK12650 382 AVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARL 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-403 |
1.46e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 165.86 E-value: 1.46e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 52 FLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY-Y 130
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnH 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 QNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGwnfVYYLdflSSSFEMG----------LISGFVVLAAMTKSAQVP 200
Cdd:PRK12647 140 EREAARRAALQALLVTGGGGLALLAGLILLGNVTG---TYSL---SELLASGdvirehplylAILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 201 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLS 278
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLggTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 279 QLGLMIMTISVGLSGL---AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPF 355
Cdd:PRK12647 294 ALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2506850270 356 LAGFYSKDYILDMVS-MDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK12647 373 LFGFLAKELIYEALLeAPLWSLILTVAAVLGNALMVAVAFLVGIKPFLG 421
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-403 |
3.82e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 165.02 E-value: 3.82e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYY 130
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 -QNVKSYNAGMLTVLSNRVGDVALLM-VIAWMINFGGWNFVYYL---DFLSSSFEMGLISGFVVLAAMTKSAQVPFSSWL 205
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGgLILLGKITGSFSIDAVIasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 206 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSG--ITMFMAGLGANFEYDLKSIIALSTLSQLGLM 283
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAglITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 284 IMTISVGLSGL----------------AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSN 347
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHETG-TRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2506850270 348 FALCGMPFLAGFYSKD---------YILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEmffaeaitaHLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-401 |
5.87e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 165.10 E-value: 5.87e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMA-GDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY 129
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 YQNVK-SYNAGMLTVLSNRVGDVALLMVIAWMINFGGwnfVYYL-DFLSSSFEMGLISGFVVL---AAMTKSAQVPFSSW 204
Cdd:PRK12644 149 YAERAaSRRAALQALLVTTAGGLAMLVGIIILGQAAG---TYRLsELLADPPTGPAVSVAVVLilvGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 205 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLS--SLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGL 282
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVwrPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 283 MIMTISVG-----LSGLAFfhLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLA 357
Cdd:PRK12644 306 LTVLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2506850270 358 GFYSKDYILDMV----SMDYVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK12644 383 GFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLWGAF 430
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
71-404 |
6.44e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 160.83 E-value: 6.44e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 71 LVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-IYYQNVKSYNAGMLTVLSNRVG 149
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 150 DVALLMVIA---WMIN-------FGGWNFVYYLDFLSSSFeMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALV 219
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 220 HSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVS--GITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFF 297
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLISLigIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 298 HLLTHALFKALLFMCAGGVIHFMG--------DSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILdmv 369
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMEpivgyspdKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL--- 421
|
330 340 350
....*....|....*....|....*....|....*.
gi 2506850270 370 SMDYVNVFSFALLFLST-GLTVCYSFRLFYYVFCGD 404
Cdd:CHL00025 422 NDSWLYSPIFAIIAWSTaGLTAFYMFRIYLLTFEGH 457
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
52-399 |
3.75e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 159.15 E-value: 3.75e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 52 FLFDWMSLLFVGFVFIISSLVILYSEDYMA-GDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY- 129
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSsRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 YQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYL----DFLSSSFEMGLISGFVVLAAMTKSAQVPFSSWL 205
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlgqaDHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 206 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP--AFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGlM 283
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPllGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-M 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 284 IMTIsVGLSGL-------------------AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLM 344
Cdd:PRK12646 313 IMAM-VGIGGGyaqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRILSGMRQLFPKMNLVMT 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2506850270 345 VSNFALCGMPFLAGFYSKDYILD-MVSMDYVNVFSFALLFLSTGLTVCYSFRLFYY 399
Cdd:PRK12646 391 IAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTY 446
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
17-471 |
1.58e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 154.27 E-value: 1.58e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 17 GVIFSLLGIYFVLFNFTYFLDWGIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLF 96
Cdd:MTH00063 6 SLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 97 VVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLdfls 176
Cdd:MTH00063 86 VLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCL---- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 177 ssfemglisgFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSGI-TM 255
Cdd:MTH00063 162 ----------FFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLlTI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 256 FMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLV-- 333
Cdd:MTH00063 232 FITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSIly 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 334 -SFIPFTSSCLMVSnfaLCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGDFNFSSSfs 412
Cdd:MTH00063 312 gSWNLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSG-- 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2506850270 413 feevnYNMSYGMIGLLIMsiFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGY 471
Cdd:MTH00063 387 -----VRFLFFNSGLMVF--LWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGV 438
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
55-403 |
2.32e-38 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 150.85 E-value: 2.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 55 DWMSLLFVGFVFIISSLVILYSEDYMAGDI-NIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNV 133
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 134 KSYNAG-----MLTVLsnrvGDVALLMVIAWMINFGGW----NFVYYLDFLSSS--FEMGLIsgFVVLAAMTKSAQVPFS 202
Cdd:PRK12645 157 EASRYGaqksmLITVF----GGLSMLGGFILLYIMTGSfsirEMIANADEIQNSplFIPAMI--LILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 203 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLS-SLLLLVSG-ITMFMAGLGANFEYDLKSIIALSTLSQL 280
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVwFWTVTLVGlITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 281 GLMIMTISVGLSGL----------------AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLM 344
Cdd:PRK12645 311 GLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIAL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2506850270 345 VSNFALCGMPFLAGFYSKDYILD-MVSMDYVNVFSFALL--------FLSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK12645 390 IGALSMAGLPPFNGFLSKEMFFEsMLNATEANLFSLDTWgvlfpviaWVASVFTFVYSIIFIFKTFFG 457
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
2.00e-36 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 141.65 E-value: 2.00e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 45 GSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMA-------GDINIVRFIILVLLFVVSMFFLIISPNMISILLGWD 117
Cdd:PRK06525 64 GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 118 GLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDFLSSSFEMgLISGFVVLAAMTKSA 197
Cdd:PRK06525 144 ITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY-LVFLGILFAAWGKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 198 QVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR---FSPAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIAL 274
Cdd:PRK06525 223 QLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARaiqSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 275 STLSQLGLMIMTISVGLSGL------AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNF 348
Cdd:PRK06525 303 STITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
330
....*....|....*...
gi 2506850270 349 ALCGMPFLAGFYSKDYIL 366
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-573 |
9.66e-35 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 129.21 E-value: 9.66e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 392 YSFRLFYYVFCGDFNFSSSFSFEEVNYNMSYGMIGLLIMSIFGGSSLMWLICPSPSVICLPWYLSLLTLFVLMVGGWLGY 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 472 TLAGFSFSDVLFSIrNYKYTTFVGSMWFMPFFSTYGVSSFPLSFGYFSMSVFDFGWLESFGGQGFYWFLVSLGKCSQWFQ 551
Cdd:pfam06455 81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 2506850270 552 YNSLSVFLGFFMMWVVTLVFVF 573
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-404 |
4.41e-29 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 122.63 E-value: 4.41e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 48 VVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV 127
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 128 IYYQNVKSYNAGMLTVLSNRVGDvALLMVIAWMINFGGWNFVYYLDFLSSSFEMGLISG---------FVVLAAMTKSAQ 198
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGG-GLFMFAGFLLLHVITGTYDIATILQDSELIENIKGhplflitliLIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 199 VPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSG--ITMFMAGLGANFEYDLKSIIALST 276
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTgmITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 277 LSQLGLMiMTI---------SVGLSGlAFFHLLTHALFKALLFMCAGGVIHfMGDSQDIRFMGGLVSFIPFTSSCLMVSN 347
Cdd:PRK12649 311 ISQLAYL-MTMygyttyhepGLGVAA-ATFHLLNHATFKACLFLVAGIVAH-EAATRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2506850270 348 FALCGMPFLAGFYSKDYILDM-VSMDYVNVFSFALLF-----LSTGLTVCYSFRLFYYVFCGD 404
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYETsVEMGALIGGPFTIIIpavavLGGVFTFAYSIKLIDGIFLGE 450
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-403 |
1.13e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 119.60 E-value: 1.13e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSedYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYY 130
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 131 QNVKSYNAGMLTVLSNRVGdvALLMVIAwminfggwnfVYYLDFLSSSFEMGLISG-------------FVVLAAMTKSA 197
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIG--STFLLIG----------VGLLYGVTGTLNMADLAGalaenptvvtafgFVLLALALKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 198 QVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------SPAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKS 270
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 271 IIALSTLSQLGLMIMTISV----GLSGlAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVS 346
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALltplALAA-GLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVA 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2506850270 347 NFALCGMPFLAGFYSKDYILdMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK08375 376 SLSLIGVPPTSGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG 431
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-403 |
1.27e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 107.75 E-value: 1.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 55 DWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVK 134
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 135 -SYNAGMLTVLSNRVGDVALLMVIAWMIN-FGGWNF------VYYLDFLSSSFEMG-------LISGFVVLAAMTKSAQV 199
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNMadlsakIRGLSFPLTGGLAGnpplalgVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 200 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF----------SPAFNSFLSSLLLLVSGITMFMAGLGANFEYDL 268
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 269 KSIIALSTLSQLGLMIMTISVGLS---GLAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMV 345
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2506850270 346 SNFALCGMPFLAGFYSKDYILDMVsMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-362 |
1.52e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 108.28 E-value: 1.52e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 50 MTFLFDWMSLLFVGFVFIISSLVILYSEDY---MAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCL 126
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 127 VIY-YQNVKSYNAGMLTVLSNRVGDVaLLMVIAWMINFGGWNFVYYLDFLSSSfEMGLISGFVVLAAMTKSAQVPFSSWL 205
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTV-FLMLGIIVLFIQTGSFELSPLGASAG-ILSLVFLLLFLGFGIKAGIIPFHKWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 206 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSGITMFMAGLGANF---EYDLKSIIALSTLSQLG 281
Cdd:PRK08667 229 PYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYalkEHDLKGLLAYSSIENIG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 282 LMIMTISV----GLSGL----------AFFHLLTHALFKALLFMCAGGVIHFMGDsQDIRFMGGLVSFIPFTSSCLMVSN 347
Cdd:PRK08667 308 IILMGIGLyvifGVYGLdtlallalggALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGA 386
|
330
....*....|....*
gi 2506850270 348 FALCGMPFLAGFYSK 362
Cdd:PRK08667 387 VSIAALPPFNGFASE 401
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
95-366 |
2.62e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 104.20 E-value: 2.62e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 95 LFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTVLSNRVGDVALLMVIAWMI-NFGGWNFVYYL 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 173 DFLSSSFEMGLISGFVVLAAMTKSAQVPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS----PAFNSFLSSLL 247
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfdllGAPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 248 LLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLA--------------FFHLLTHALFKALLFMCA 313
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2506850270 314 GGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYIL 366
Cdd:PRK06521 360 GAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
57-317 |
2.83e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 103.62 E-value: 2.83e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 57 MSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVK-S 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPfA 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 136 YNAGMLTVLSNRVGDVALLMVIA-WMINFGGWNfvyyLDFLSSSFEMGLISG-------FVVLAAMTKSAQVPFSSWLPA 207
Cdd:PRK08168 150 RLAAHKKFIADRLAELLLLAAAAlAYLEVGSLS----LSALWAHLAAQGASPslqaaalLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 208 AMAAPTPVSALVHSStLVTAGVYLLIRFSP--AFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIM 285
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPllEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|..
gi 2506850270 286 TISVGLSGLAFFHLLTHALFKALLFMCAGGVI 317
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
144-476 |
1.05e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 99.21 E-value: 1.05e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 144 LSNRVGDVALLM-VIAWMINFGGWNF---------VYYLDFLSSSFEMGLISGfvvlaAMTKSAQVPFSSWLPAAMAAPT 213
Cdd:PRK07390 178 LTKRVGDLLLLMgVVALSPLAGTLNFsdlaawaatANLDPLTATLLGLALIAG-----PTGKCAQFPLHLWLDEAMEGPN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 214 PVSALvHSSTLVTAGVYLLIRFSPAFNS--FLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGL 291
Cdd:PRK07390 253 PASIL-RNSVVVATGAWVLIKLQPVLALspVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQ 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 292 SGLAFFHLLTHALFKALLFMCAGGVIhFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSM 371
Cdd:PRK07390 332 PDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWA 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 372 DYVNVfsFALLFLSTGLTVCYSFRLFYYVFCGDfNFSSSFSFEEVNYNMSYGMIGLLIMSIFgGSSLMWLICPSPSVICL 451
Cdd:PRK07390 411 VSPWL--VGVLLLVNALTAFNLTRVFRLVFLGK-PQQKTRRSPEVLWPMALPMVILAGFTLH-LPLLLQQWGLLPSWEAL 486
|
330 340
....*....|....*....|....*
gi 2506850270 452 PWYLSLLtlfvLMVGGWLGYTLAGF 476
Cdd:PRK07390 487 NLWAAPL----LVASGLLGVLLGAW 507
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-435 |
1.51e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 95.16 E-value: 1.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 52 FLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQ 131
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 132 NV-KSYNAGMLTVLSNRVGDVALLMVIAWMI-NFGGWNFVYYLDFLSSSFEMGLISGFVVLAA--MTKSAQVPFSSWLPA 207
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 208 AM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPAFNSFLSSLLLLVSG-ITMFMAGLGANFEYDLKSIIALSTLSQL 280
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGcLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 281 GLMIMTISVGLSGL---------------AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMV 345
Cdd:PRK08376 324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 346 SNFALCGMPFLAGFYSKDYILDMVSMdyVNVFSFALLFLSTGLTVCYSFRLFYYVFCGdFNFSSSFSFEEVNYNMSYGMI 425
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFG-PPSEKVMNVKEPPKPMLVPML 479
|
410
....*....|
gi 2506850270 426 GLLIMSIFGG 435
Cdd:PRK08376 480 ILAIAIIGMG 489
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-366 |
3.26e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 87.70 E-value: 3.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 105 ISPNMISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAwminfggwnFVYY----LDFLSSSFE 180
Cdd:PRK07234 112 VCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV---------LVYQangtFAFSGLATA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 181 MGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSGiTMFMAGL 260
Cdd:PRK07234 183 DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVG-TALLGVL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 261 GANFEYDLKSIIALSTLSQLGLMIMTISVGlsglAFFHlLTHALFKALLFMCAgGVIHFMGDSQDIRFMGGLVSFIPfts 340
Cdd:PRK07234 262 FALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCA-GALPSRNFTELISQMLGIGKWIP--- 332
|
250 260
....*....|....*....|....*.
gi 2506850270 341 scLMVSNFALCGMPFLAGFYSKDYIL 366
Cdd:PRK07234 333 --LTMASFSIAGFPLLAGFVSKVLTL 356
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
39-317 |
3.49e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 87.78 E-value: 3.49e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 39 GIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLL--FVVSMFFLIISPNMISILLGW 116
Cdd:PRK08601 55 GLIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWLSGDLRLMALCWGA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 117 DGLGLVSYCLVIYYQNVKSyNAGMLTVLSNRVGDVALLMVIAWM-INFGGWNFVYYLDFLS----SSFEMGLISGFVVLA 191
Cdd:PRK08601 135 TLLGLTLLIGLNKGWKVAR-EAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSNENlaqlGTWEKTGINLLLILA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 192 AMTKSAQVPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPAFNSFLSSLLLLVSGITMFMAGLGANF-EYDLKS 270
Cdd:PRK08601 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLvQVDYKR 292
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2506850270 271 IIALSTLSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVI 317
Cdd:PRK08601 293 QLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-401 |
1.28e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 86.02 E-value: 1.28e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 59 LLFVGFVFIissLVILYSEDYMAGDI--NIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVKSY 136
Cdd:PRK06589 89 LLLIGFLWI---CALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 137 NAGM--LTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDFlssSFEMGLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTP 214
Cdd:PRK06589 166 SGGYkyLKILMISALLLFLPAVILIYTKTGNLDFVSGGLF---SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYP 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 215 VSALVHSSTLVTAGVYLLIR-----FSPAFN---SFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMT 286
Cdd:PRK06589 243 VSALLHAVIVVKTGLFCIYKillyiFGLSYLqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 287 ISVGLS---GLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFiPFTSSCLMVSNFALCGMPFLAGFYSKD 363
Cdd:PRK06589 323 AFILTPkalGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSF-PLISFIISISSLSLIGIPIFSGFISKF 401
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2506850270 364 YILDMVSMD---YVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK06589 402 LILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
45-401 |
2.79e-17 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 85.33 E-value: 2.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 45 GSSVVMTFL--------FDWMSLLFvGFVFIISSLV-ILYSedYMAGDINIVrfiILVLLFVVSMFFLIISPNMISILLG 115
Cdd:PRK12668 48 GTYLTVTFLgfdlvlgrVDKLSRVF-GLIFGIMAFIgVIYA--LHVKDPGQH---VAALLYVGSALGAVFAGDLLTLFVF 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 116 WDGLGLVSYCLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGwnfvyYLDFLSSSFEMGLISGFVVLAAMTK 195
Cdd:PRK12668 122 WELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETG-----SFAFGAIAGLGGTAAWLILIGFGVN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 196 SAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFnsflssllLLVSGITMFMAGLGANF---EYDLKSII 272
Cdd:PRK12668 197 AAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGT--------ELLIYIGAAMAVYGVFFallENDLRRLL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 273 ALSTLSQLGLMIMTISVG----LSGlAFFHLLTHALFKALLFMCAGGVIHFMGDSqDIRFMGGLVSFIPFTSSCLMVSNF 348
Cdd:PRK12668 269 SYHIVSQVGYMVAGIGIGtalaING-AVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFCLVGAL 346
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2506850270 349 ALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK12668 347 SISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAF 399
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
186-403 |
5.63e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 80.51 E-value: 5.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 186 GFVVLAAMtksaqVPFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGL 260
Cdd:COG1008 218 AFAVKVPM-----FPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlplfPEASAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 261 GANFEYDLKSIIALSTLSQLGLMIMTI----SVGLSGlAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFI 336
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLGIfalnPLGLQG-AVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRM 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2506850270 337 PFTSSCLMVSNFALCGMPFLAGFYSKDYILdmVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:COG1008 370 PVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
51-366 |
2.90e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 78.23 E-value: 2.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMAG-DINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLV-I 128
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 129 YYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGwnfVYYLDFLSSSFEMGLISGFVVLAAMT--------KSAQVP 200
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG---SLNLAGIAAALAAGGANSPLLLLGLVlvlaglafKLSAVP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 201 FSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF----SPAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIAL 274
Cdd:COG1007 222 FHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 275 STLSQLGLMIMTISVGLS---GLAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALC 351
Cdd:COG1007 300 SSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLA 379
|
330
....*....|....*
gi 2506850270 352 GMPFLAGFYSKDYIL 366
Cdd:COG1007 380 GIPPTAGFFGKFYVF 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-403 |
5.61e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.11 E-value: 5.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 17 GVIFS-LLGIYFVLFNFTYFLDWGI-VMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGdiNIVRFIILVL 94
Cdd:PRK08668 28 GVIGNaLPLLFLIKLYFTLKVGTGEkLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTK--NDAYFNMFAL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 95 LFVVSMFFLIISPNMISILLGWDGLGLVSYcLVIYYQNVKSYNAGMLTVLSNRVGDVALLMVIAWMIN-FGGWNFVYYLD 173
Cdd:PRK08668 106 MSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQ 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 174 FLS--SSFEMGLISGFVVLAA-MTKSAQVPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLI---------------- 233
Cdd:PRK08668 185 GLIndTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLlvlyvlpgtklfsefg 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 234 --RFSPAFNSFLSSLLllvsGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLS---GLAFFHLLTHALFKAL 308
Cdd:PRK08668 264 tyRGVPLFNYILAWLG----NISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 309 LFMCAGGVIHFMGDSQdIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILDMVSMDYVNVFSFALLFLSTGL 388
Cdd:PRK08668 340 FFLIFAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGS 418
|
410
....*....|....*
gi 2506850270 389 TVcYSFRLFYYVFCG 403
Cdd:PRK08668 419 FL-YVFRPLAGVFLG 432
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
183-401 |
1.30e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 76.34 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 183 LISGFVVLAAMtksaqVPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR----FSPAFNSFLSSLLLLVSG-ITMF 256
Cdd:PRK08377 212 LIFGLAVEAEL-----FPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMAtLTVF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 257 MAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGLSG---LAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLV 333
Cdd:PRK08377 286 FAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLG-GTEIEKFEGLG 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2506850270 334 SFIPFTSSCLMVSNFALCGMPFLAGFYSKDYILdMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK08377 365 KRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMW 431
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
184-404 |
3.39e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 74.99 E-value: 3.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 184 ISGFVVLAAMTKSAQVPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAG 259
Cdd:PRK12663 209 IALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFtllfPQERELLHPLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 260 LGANFEYDLKSIIALSTLSQLGLMIMTISV----GLSGlAFFHLLTHALFKALLFMCAGGVIhFMGDSQDIRFMGGLVSF 335
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALgtpaGING-AIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2506850270 336 IPFTSSCLMVSNFALCGMPFLAGFYSKdYILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCGD 404
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGK-VLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAYWGD 433
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-403 |
2.69e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 69.20 E-value: 2.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 55 DWMSLLFVGFVFIISSLVILYSedYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQNVK 134
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 135 SYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDF---LSSSFEMGLISGFVVLAAMtKSAQVPFSSWLPAAMA- 210
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLnlpLPFGVQTWLFLAFFIAFAV-KVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 211 APTPVSALVhSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMT 286
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNlplfPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 287 I----SVGLSGlAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSK 362
Cdd:TIGR01972 312 IfsfnELGISG-AVFQMISHGLITAALFLLVGVLYERAH-TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2506850270 363 dyILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:TIGR01972 390 --FLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-404 |
3.31e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.82 E-value: 3.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 194 TKSAQVPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR-FSPAFN---SFLSSLLLLVSGITMFMAGLGANFEYDL 268
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFTLFFShdtSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 269 KSIIALSTLSQLGLMIMTISV----GLSGlAFFHLLTHALFKALLFMCAGGVIHFMGDSqDIRFMGGLVSFIPFTSSCLM 344
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMmtesGMIG-AIYYLIHDMIVKAALFLLIGIMIKITGTT-DLKKMGGLIKRYPVLGWMFF 377
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2506850270 345 VSNFALCGMPFLAGFYSKDYILdmVSMDYVNVFSFALLFLSTGLTVCYS-FRLFYYVFCGD 404
Cdd:PRK07691 378 IAALSLAGIPPLSGFYGKFFIV--EGTFEAGFYVSGIIVLLSSLLVLYSvIKIFLKGFWGE 436
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
184-359 |
2.43e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.39 E-value: 2.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 184 ISGFVVLAAMtksaqVPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS---PAFNSFLSSLLLLVSGITMFMAG 259
Cdd:PRK08042 187 VIGFGLLAGI-----IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSllgGNAPLWWGVALLVLGMITAFVGG 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 260 LGANFEYDLKSIIALSTLSQLGLMIMTISVGLSGLA--------------FFHLLTHALFKALLFMCAGGVIHFMGdSQD 325
Cdd:PRK08042 261 LYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTG-HRD 339
|
170 180 190
....*....|....*....|....*....|....
gi 2506850270 326 IRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGF 359
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
51-366 |
2.93e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 66.00 E-value: 2.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVrFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY- 129
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 YQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGG-WNFVYYLDFLSSSFEM--GLISGFVVLAA--MTKSAQVPFSSW 204
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGsLSFAGIAKALADGSGNslLLLFGLVFLLVglAFKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 205 LPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALSTLSQ 279
Cdd:PRK05777 227 TPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLvvafGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 280 LGLMIMTISV----GLSGlAFFHLLTHALFKALLFMCAGGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPF 355
Cdd:PRK05777 306 AGYLLVGLAAgtaeGYSA-VLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
330
....*....|.
gi 2506850270 356 LAGFYSKDYIL 366
Cdd:PRK05777 385 TAGFWGKFYVF 395
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
199-359 |
9.72e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 64.07 E-value: 9.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 199 VPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIA 273
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlplfPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 274 LSTLSQLGLMIMTI----SVGLSGlAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFIPFTSSCLMVSNFA 349
Cdd:PRK05846 307 YSSISHMGFVTLGIfagnQLGIQG-AIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
170
....*....|
gi 2506850270 350 LCGMPFLAGF 359
Cdd:PRK05846 385 SLGLPGTSGF 394
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-366 |
5.38e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 5.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 187 FVVLAAMTKSAQVPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGAN 263
Cdd:PRK08676 211 FIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAF 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 264 F---EYDLKSIIALSTLSQLGLMIMTISVGLSGLAF---FHLLTHALFKALLFMCAgGVIHFMGDSQDIRFMGGLVSFIP 337
Cdd:PRK08676 290 SmlsQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSA-GILHRQYRSDRFDRIFDVFRLQP 368
|
170 180
....*....|....*....|....*....
gi 2506850270 338 FTSSCLMVSNFALCGMPFLAGFYSKDYIL 366
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
181-361 |
9.31e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.10 E-value: 9.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 181 MGLISGFVVLAAMTKSAQVPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRF----SPAFNSFLSSLLLLVSG-IT 254
Cdd:PRK06458 213 MKLAFVFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYyiliDAAIGSDFPGRLLLIFGlLS 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 255 MFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGlSGLAFF----HLLTHALFKALLFMCAGGVIHFMGdSQDIRFMG 330
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIR 369
|
170 180 190
....*....|....*....|....*....|.
gi 2506850270 331 GLVSFIPFTSSCLMVSNFALCGMPFLAGFYS 361
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-401 |
2.64e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.75 E-value: 2.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 53 LFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIYYQN 132
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 133 VKSYNAGMLTVLSNRVG------DVALLMVIAWMINFGGWNFVYYLDFLSSSFEMGLIsgFVVLAAMTKSAQVPFSSWLP 206
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVL--FIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 207 AAMAAPTPVSALVHSSTLVTAGVYLLIR-FSPAFNSFLSSLLLLVSGITMFMAGLG-------ANFEYDLKSIIALSTLS 278
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRiVYDVFKANFVFTTLPFNNVFMILAALAivfgsvlAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 279 QLGLMIMTISVGL-SGL--AFFHLLTHALFKALLFMCAGGvIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSNFALCGMPF 355
Cdd:PRK12662 314 HIGYIILAVSLNTyYGLaaAVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2506850270 356 LAGFYSKDYILDMVsMDYVNVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK12662 393 TSGFVAKWYILDAF-IKSNAWIGLVVLLVGSGLSVIYVWKIVEALY 437
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
18-366 |
5.93e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 55.34 E-value: 5.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 18 VIFSLLGIYFVLFNFTYFLDWGIVMLNGSSvvmTFLFDWMSLLFVGFVFIISSLVILYSEDYM-AGDINIVRFIILVLLF 96
Cdd:TIGR01770 35 KNLSYIVLLSALVSLFLTLQYAAYLFTGFS---FFIVDNFALLIKLILLLSTLLTFFFALSYLsKEKINKFEFYILLLFA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 97 VVSMFFLIISPNMISILLGWDGLGLVSYCLVIY-YQNVKSYNAGMLTVLSNRVGDVALLMVIAWMINFGG-------WNF 168
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGslnfedlLLF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 169 VYYLDFLSSSFEMGLIsgFVVLAAMTKSAQVPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPAFNSFLSSLL 247
Cdd:TIGR01770 192 LSNGMLNISLLLLGIV--LILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYILFGFSEAW 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 248 LLVSGI----TMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISVGlSGLAFFHLLTHALFKALLFMCAGGVIHFMGDS 323
Cdd:TIGR01770 269 QIFLAIiaflSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAG-TLEGIKAVLFYIFIYALMSLGAFGVLSLLRSY 347
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2506850270 324 QD-----IRFMGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKDYIL 366
Cdd:TIGR01770 348 KDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVF 395
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-365 |
1.00e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 54.62 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 51 TFLFDWMSLLFVGFVFIISSLVILYSEDYM-AGDINIVRFIILVLLFVVSMFFLIISPNMISILLGWDGLGLVSYCLVIY 129
Cdd:CHL00049 74 NFQTNNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 130 Y-QNVKSYNAGMLTVLSNRVGDVALLMVIAWM--INFGGWNFVYYLDFLSSSFEMGLISGFVVLAAMT-----KSAQVPF 201
Cdd:CHL00049 154 TkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 202 SSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIALST 276
Cdd:CHL00049 234 HQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFdipfYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 277 LSQLGLMIMTISVGLSGLAFFHLLTHALFKALLFMCAGGVIHFMG---DSQDIRFMGGLVSFIPFTSSCLMVSNFALCGM 353
Cdd:CHL00049 313 IGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
330
....*....|..
gi 2506850270 354 PFLAGFYSKDYI 365
Cdd:CHL00049 393 PPLAGFFGKLYL 404
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
195-362 |
1.29e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.20 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 195 KSAQVPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPAF--NSFLSSLLLLVSGITMFMAGLGANFEYDLKSI 271
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 272 IALSTLSQLGLMIMTISV----GLSGlAFFHLLTHALFKALLFMCAgGVIHFMGDSQDIRFMGGLVSFIPFTSSCLMVSN 347
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALstvaGLSG-AIYYVAHHITVQTTLFLVV-GLIERQAGSSSLRRLGGLAKASPLLAVLFFVPA 378
|
170
....*....|....*
gi 2506850270 348 FALCGMPFLAGFYSK 362
Cdd:PRK12665 379 LNLGGIPPFSGFIGK 393
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
199-359 |
3.36e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 46.63 E-value: 3.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 199 VPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIAL 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGlqlfPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 275 STLSQLGLMIMTISVG--LSGL-AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSFI---PFTSSCLMVSNF 348
Cdd:PRK07363 302 SSIGHMGYILVAAAAGtqLSLLgAVAQMISHGLILALLFHLVGIVERKVG-TRDLDVLNGLMNPIrglPLTSALLVLAGM 380
|
170
....*....|.
gi 2506850270 349 ALCGMPFLAGF 359
Cdd:PRK07363 381 ASAGIPGLVGF 391
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
199-403 |
4.09e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 4.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 199 VPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKSIIA 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGvglfPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 274 LSTLSQLG--LMIMTISVGLSGL-AFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVS---FIPFTSSCLMVSN 347
Cdd:PRK06473 301 YSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVGVVYKKTG-SRDVDVLRGLLNperGLPITGSLMILGV 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2506850270 348 FALCGMPFLAGFYSkDYILDMVSMDYVNVFSFaLLFLSTGLTVCYSFRLFYYVFCG 403
Cdd:PRK06473 380 MASAGIPGMVGFIA-EFLVFRGSFPIFPVQTL-LCMIGTGLTAVYFLLLVNRVFFG 433
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
267-362 |
6.34e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.79 E-value: 6.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 267 DLKSIIALSTLSQLGLMIMTISVG--LSGLA-FFHLLTHALFKALLFMCAGgVIHFMGDSQDIRFMGGLVSFIPFTSSCL 343
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGtpLGIVAgIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMV 367
|
90
....*....|....*....
gi 2506850270 344 MVSNFALCGMPFLAGFYSK 362
Cdd:PRK06277 368 LCAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
47-89 |
9.53e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.10 E-value: 9.53e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2506850270 47 SVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRF 89
Cdd:pfam00662 8 SISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
25-397 |
2.20e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 43.77 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 25 IYFVLFNFTYFLDWGIVMLNGSSVVMTFLF--DWMSLLFVGFVFIISSLVILYSEDYMAGDiNIVRFIILVLLFVVSMFF 102
Cdd:MTH00206 26 TFFSFLIALLFLLWFKWSSEVGWSFSNLYLsyDPLSSPLVILSCWLLPLMFLASQNHMKNE-PINRQRIYITLLIVLQLF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 103 LII---SPNMISILLGWDGLGLVSYCLVIYYQNVKS-YNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDFLSSS 178
Cdd:MTH00206 105 LILffsSSNLLLFYILFEASLIPTLLLITRWGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 179 FEMGLISGF-VVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLLLVSGIT--- 254
Cdd:MTH00206 185 TWNNNLWWLaCILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGlwg 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 255 MFMAGLGANFEYDLKSIIALSTLSQLGLMIMTISV----GLSGlAFFHLLTHALFKALLFmCAGGVIHFMGDSQDIRFMG 330
Cdd:MTH00206 265 SIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSgspwGFKG-ALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNR 342
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2506850270 331 GLVSFIPFTSSCLMVSNFALCGMPFLAGFYSKdyILDMVSMDYVNVFSFALLFLSTGLTVCYSFRLF 397
Cdd:MTH00206 343 GLQMILPLLSFWWLLFFLANLGLPPFPNLFGE--LLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMF 407
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
178-361 |
7.04e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 7.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 178 SFEMGLISGFVVlAAMTKSAQVPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS----PAFNSFLSSLLLLVSG 252
Cdd:PRK12561 182 ALELLLYAGFLI-AFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvqmlPDAHVYFAPALAILGV 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 253 ITMFMAGLGANFEYDLKSIIALSTLSQLGLMIMTIS----VGLSGlAFFHLLTHALFKALLFMCAGgVIHFMGDSQDIRF 328
Cdd:PRK12561 260 VNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAaftdLGISG-AMLQMISHGLIAAALFFLTG-VTYERTHTLSIPN 337
|
170 180 190
....*....|....*....|....*....|...
gi 2506850270 329 MGGLVSFIPFTSSCLMVSNFALCGMPFLAGFYS 361
Cdd:PRK12561 338 MGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
39-316 |
4.38e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 39 GIVMLNGSSVVMTFLFDWMSLLFVGFVFIISSLVILYSEDYMAGDINIVRFI-ILVLLFVVSMFFLIISPNMISILLGWD 117
Cdd:PRK06459 23 SYILTMISSIILLITSIYEYNGVLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 118 GLGLVSYCLVIYYQNvKSYNAGMLTVLSNRVGDVALLMVIAWMINFGGWNFVYYLDFLSssfemgLIsgFVVLAAMTKSA 197
Cdd:PRK06459 103 IMTIPSYVAIALTKK-NKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVP------LI--LASFGFIIKMG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 198 QVPF--SSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRF----SPAFNSFLSSLLLLVSGITMFMAGLGANFEYDLKS 270
Cdd:PRK06459 174 MMPFlvSEWLPIAHGnAPSNFSA-ILSATMTLMGVYGILKMtiltQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKG 252
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2506850270 271 IIALSTLSQLGLMI------MTISVGLSGLAFFHLLT-------HALFKALLFMCAGGV 316
Cdd:PRK06459 253 LLAFSTIENNGAILvalglyMVTKQLITSIEHFSLITvilysfaHSVAKTGLFLSSGLQ 311
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-401 |
4.48e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 39.71 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 182 GLISGFVVLAAMTKSAQVPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPAFNSFLSSLLllvsgITMFMAGLG 261
Cdd:PRK12664 144 GYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSGEEILLFLGI-----ITAIYGIIF 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2506850270 262 ANFEYDLKSIIALSTLSQLGLMIMTISVGLS-----GLAFFHLLTHALFKALLFMCAGGVIHFMGdSQDIRFMGGLVSfI 336
Cdd:PRK12664 219 ASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSsgvaiGILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGGLFK-M 296
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2506850270 337 PFTSSCLMVSNFALCGMPFLAGFYSKDYIL---DMVSMDYVnVFSFALLFLSTGLTVCYSFRLFYYVF 401
Cdd:PRK12664 297 SLEAMCCIIAILNMGAFPGTAGFVSKSLIThsiDTAGLTLV-LYKKLFLICSLLLFASVGLKFFWYAF 363
|
|
| |
