|
Name |
Accession |
Description |
Interval |
E-value |
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
141-438 |
8.06e-67 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 222.65 E-value: 8.06e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSG--SFNIAALAYVPIAPALQKLL 218
Cdd:COG1008 132 DLFLFYVFWELMLIPMYFLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPLPLTAQLLL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASL 298
Cdd:COG1008 212 FLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 299 AALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPL 378
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPV 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 379 WSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:COG1008 372 LAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRV 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
121-481 |
1.61e-58 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 200.55 E-value: 1.61e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 121 LLYALVMCSAALIIAAFIAADMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSG-S 199
Cdd:TIGR01972 107 EFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 200 FNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANS 279
Cdd:TIGR01972 187 FDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 280 YYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYE 359
Cdd:TIGR01972 267 YFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYE 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 360 RTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRIA 439
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVF 426
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2501516734 440 FGASSSSFASKALDIAAYELLALLPLLAALFLTGLLPNMLLN 481
Cdd:TIGR01972 427 FGELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLD 468
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
141-438 |
6.27e-57 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 196.96 E-value: 6.27e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAA----SSGSFNIAALAYVPIAPALQK 216
Cdd:PRK05846 132 DLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVvyynATGTFDIADLLNLPLPPGVQY 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYA 296
Cdd:PRK05846 212 WLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:PRK05846 292 ALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVM 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:PRK05846 372 PVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRV 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
141-438 |
1.30e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 182.19 E-value: 1.30e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLW 219
Cdd:MTH00204 133 DLLLFYILFEGILIPMFLLIGIWGSrEEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 220 ALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLA 299
Cdd:MTH00204 213 VGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLT 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 300 ALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLW 379
Cdd:MTH00204 293 TCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 380 SLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00204 373 VIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRI 431
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
141-438 |
1.23e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 174.08 E-value: 1.23e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLW 219
Cdd:MTH00217 130 DLVGFYILFEGILIPMFLIIGIWGSrEEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 220 ALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLA 299
Cdd:MTH00217 210 LGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLT 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 300 ALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLW 379
Cdd:MTH00217 290 TCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLF 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 380 SLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00217 370 GILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRV 428
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
141-435 |
2.03e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 145.83 E-value: 2.03e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQ---K 216
Cdd:MTH00068 114 ELILFYIFFEATLIPTLIIITRWGNqEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMTytnK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLcAFISLLYA 296
Cdd:MTH00068 194 IWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIIL-ALWGVLMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:MTH00068 273 SLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTIL 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLY 435
Cdd:MTH00068 353 PLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMF 411
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
141-435 |
2.25e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 145.47 E-value: 2.25e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLW 219
Cdd:MTH00206 113 NLLLFYILFEASLIPTLLLITRWGNqKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWW 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 220 ALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFiSLLYASLA 299
Cdd:MTH00206 193 LACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLW-GSIMTSSI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 300 ALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLW 379
Cdd:MTH00206 272 CLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLL 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2501516734 380 SLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLY 435
Cdd:MTH00206 352 SFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMF 407
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
141-438 |
7.27e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 145.06 E-value: 7.27e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPA--LQKL 217
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSrEEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSeqTQKW 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 218 LWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYAS 297
Cdd:MTH00226 232 IFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 298 LAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMP 377
Cdd:MTH00226 312 FATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMP 391
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2501516734 378 LWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00226 392 IWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRV 452
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
121-405 |
1.19e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 144.40 E-value: 1.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 121 LLYALVMCSAALIIAAFIAADMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSG-- 198
Cdd:PRK12561 88 LFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDtf 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 199 SFNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIAN 278
Cdd:PRK12561 168 TFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAH 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 279 SYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGcsICSFSS--ILGCLMLLWAHALSAALLFYLIGN 356
Cdd:PRK12561 248 VYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLG--IAAFTDlgISGAMLQMISHGLIAAALFFLTGV 325
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2501516734 357 MYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLI 405
Cdd:PRK12561 326 TYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTV 374
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
141-405 |
6.67e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 142.54 E-value: 6.67e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSG--SFNIAALAYVPIAPALQKLL 218
Cdd:PRK02546 136 DMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAKDFGLGFQLLC 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASL 298
Cdd:PRK02546 216 YAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAAL 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 299 AALRQLDGKRLIAYSSIAHMALVLLGcsICSFSSI--LGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:PRK02546 296 TSFAQRNLKRKIAYSSISHMGFVLIG--IGSFTDLgtSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKM 373
|
250 260
....*....|....*....|....*....
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLI 405
Cdd:PRK02546 374 RKMFAMWTACSLASLALPGMSGFVAELMV 402
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
142-438 |
9.25e-36 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 137.66 E-value: 9.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 142 MLFFFVLFEAALLPLLVMLLLYGSS-NKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWA 220
Cdd:MTH00150 77 LLMFYFFFEASLIPTLLLILGWGYQpERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLlYASLAA 300
Cdd:MTH00150 157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGV-LTSLIC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWS 380
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2501516734 381 LLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSI 373
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
141-438 |
3.37e-35 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 136.05 E-value: 3.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYV--PIAPALQKLL 218
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARlaELDPGLLLAA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLC-SIANSYYAALLHLCAFISLLYAS 297
Cdd:COG0651 208 FALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFgADPALFLGTLLLVLGLLTMLVGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 298 LAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMP 377
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2501516734 378 LWSLLFLLASLANMALPSTSNFVAELLILSSAYKS-SLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:COG0651 368 LTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAgAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
141-436 |
4.97e-35 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 136.09 E-value: 4.97e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQK--- 216
Cdd:MTH00124 114 ELTLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWtnl 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLcAFISLLYA 296
Cdd:MTH00124 194 LLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTL-ALWGALMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:MTH00124 273 SLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLL 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYS 436
Cdd:MTH00124 353 PLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFL 412
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
141-436 |
8.69e-33 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 129.86 E-value: 8.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYG-SSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLW 219
Cdd:MTH00014 111 NLLMFYIFFEASLIPTLFLILGWGyQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 220 ALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLyASLA 299
Cdd:MTH00014 191 LITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVI-TSLI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 300 ALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLW 379
Cdd:MTH00014 270 CIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTM 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2501516734 380 SLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYS 436
Cdd:MTH00014 350 TMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYT 406
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
141-438 |
1.75e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 128.73 E-value: 1.75e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSN-KLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIapaLQKLLW 219
Cdd:MTH00163 108 NLLLFYIFFESSLIPTLFLILGWGYQPeRLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGS---LNFLWY 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 220 ALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCaFISLLYASLA 299
Cdd:MTH00163 185 LSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISIS-LVGGVIVSLI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 300 ALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLW 379
Cdd:MTH00163 264 CLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSM 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 380 SLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00163 344 SLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYS 402
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
141-435 |
5.18e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 125.01 E-value: 5.18e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLL-ASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYV--PIAPALQK- 216
Cdd:MTH00110 114 ELIMFYILFEATLIPTLIIITRWGNQTERLnAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWaqPLPNSWSNn 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFiSLLYA 296
Cdd:MTH00110 194 LLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLW-GMIMT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:MTH00110 273 SSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLL 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLY 435
Cdd:MTH00110 353 PLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYML 411
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
141-436 |
7.47e-31 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 124.32 E-value: 7.47e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSS-NKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAP---ALQK 216
Cdd:MTH00044 115 ELILFYIAFETTLIPTLILITRWGAQkERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSlssNSSS 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYA-ALLHLCAFISLLy 295
Cdd:MTH00044 195 IWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISfILIVFCCWGALI- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 296 ASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIA 375
Cdd:MTH00044 274 TSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLI 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2501516734 376 MPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYS 436
Cdd:MTH00044 354 TPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQ 414
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-414 |
1.17e-30 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 120.50 E-value: 1.17e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSS-NKLLASLRLVLYTMLGSVAFLIALMSIAASSGS---FNIAALAYVPIAPALQK 216
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfDELSKALTGGLNSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLaPLCSIANSYYAALLHLCAFISLLYA 296
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRS-LLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNM-YERTHTRLLKYMRAAIIA 375
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViYRRVHTRNIRDYGGLAKT 241
|
250 260 270
....*....|....*....|....*....|....*....
gi 2501516734 376 MPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSL 414
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASW 280
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
141-435 |
2.87e-30 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 122.76 E-value: 2.87e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPAL---QK 216
Cdd:MTH00127 115 EIIMFYVMFEATLIPTLIIITRWGNqTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSswaDK 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRY---LAPLCSIANSYYAALlhlcAFISL 293
Cdd:MTH00127 195 LWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMmvmLDPLTKELSYPFIIL----ALWGI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 294 LYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAI 373
Cdd:MTH00127 271 IMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQ 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2501516734 374 IAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLY 435
Cdd:MTH00127 351 MILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMF 412
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
142-438 |
6.72e-29 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 118.54 E-value: 6.72e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 142 MLFFFVLFEAALLPLLVMLLLYGSS-NKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWA 220
Cdd:MTH00205 110 LLLFYITFEASLIPTLILILGWGYQpERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIaNSYYAALLHLCAFISLLYASLAA 300
Cdd:MTH00205 190 FLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL-NSNFSELFFSISLWGGVMTGMIC 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWS 380
Cdd:MTH00205 269 LRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLV 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2501516734 381 LLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLYSRI 438
Cdd:MTH00205 349 LMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQS 406
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
141-432 |
5.09e-28 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 116.58 E-value: 5.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIA---ASSGSFNIAALAYVPIAPALQKL 217
Cdd:CHL00011 133 DLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSYPVALEIL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 218 LWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYAS 297
Cdd:CHL00011 213 FYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 298 LAALRQLDGKRLIAYSSIAHMALVLLGcsICSFSSI--LGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIA 375
Cdd:CHL00011 293 STSLGQRNLKKRIAYSSVSHMGFIIIG--IGSITDTglNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIP 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2501516734 376 MPLWSLLFLLASLANMALPSTSNFVAELL----ILSSAYKSSLE---LSCLMALSMLFSGAYAL 432
Cdd:CHL00011 371 MPKIFTMFSSFSMASLALPGMSGFVAELIvffgIITSQKYLLMPkilITFVMAIGMILTPIYLL 434
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
123-410 |
3.16e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 114.41 E-value: 3.16e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 123 YALVMCSAALIIAAFIAADMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIA--ASSGSF 200
Cdd:PRK06473 110 YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVwlSGASSF 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 201 NIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSY 280
Cdd:PRK06473 190 DYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVY 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 281 YAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYER 360
Cdd:PRK06473 270 LAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKK 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2501516734 361 THTRLLKYMRAAII---AMPLWSLLFLLASLANMALPSTSNFVAELLILSSAY 410
Cdd:PRK06473 350 TGSRDVDVLRGLLNperGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSF 402
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
121-412 |
4.22e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 99.02 E-value: 4.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 121 LLYALVMCSAALIIAAFIAADMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGS- 199
Cdd:PRK07363 108 LYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 200 -FNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIAN 278
Cdd:PRK07363 188 sFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTW 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 279 SYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMY 358
Cdd:PRK07363 268 SLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVE 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2501516734 359 ERTHTR---LLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKS 412
Cdd:PRK07363 348 RKVGTRdldVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFST 404
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
142-435 |
6.62e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 91.51 E-value: 6.62e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 142 MLFFFVLFEAALLPLLVMLLLYGSS-NKLLASLRLVLYTMLGSVAFLIALMSiaassgSFNIAALAYVPIApaLQKLLWA 220
Cdd:MTH00094 84 MLMLYMFFELSMFPILIMILGYGSQiEKINSSYYLLFYAAFFSFPFLFVYLK------NFFFFSLCYFDFF--LSWEMFF 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALlhlcAFISLLYASLAA 300
Cdd:MTH00094 156 ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNFWIIF----SLLGMILSSFCC 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWS 380
Cdd:MTH00094 232 VFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFG 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2501516734 381 LLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLFSGAYALWLY 435
Cdd:MTH00094 312 LIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLI 366
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-409 |
1.49e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 91.09 E-value: 1.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWA 220
Cdd:PRK08375 127 DLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHL---CAFISLLYAS 297
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLlavLALLSMLVGS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 298 LAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMP 377
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
250 260 270
....*....|....*....|....*....|..
gi 2501516734 378 LWSLLFLLASLANMALPSTSNFVAELLILSSA 409
Cdd:PRK08375 367 LTAAAFAVASLSLIGVPPTSGFVSKWYLVVGA 398
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-438 |
6.06e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 83.48 E-value: 6.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 146 FVLFEAALLPLLVMLLLYGS-SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALA-------YVPIAPALQKL 217
Cdd:PRK12667 139 FVMLEVLSISAYGLVAYYRDrGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSakirglsFPLTGGLAGNP 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 218 LWALLILAML------VKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSY------YAALL 285
Cdd:PRK12667 219 PLALGVALALalwaftIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLidfraaLSPIL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 286 HLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRL 365
Cdd:PRK12667 299 IILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRD 378
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2501516734 366 LKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLelsCLMALSMLFSGAYALWLYSRI 438
Cdd:PRK12667 379 IDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGF---YLPALVLLIASAISLVGYFRA 448
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
212-411 |
1.04e-16 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 82.67 E-value: 1.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 212 PALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLC-SIANSYYAALLHLCAF 290
Cdd:PRK06458 210 PTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLLLIFGL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 291 ISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMR 370
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2501516734 371 AAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYK 411
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
141-409 |
1.05e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 1.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLlASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALA---YVPIAPALQKL 217
Cdd:PRK08668 119 DLLTLYIFWEIMTFSSFMMVPMGKKESRK-ASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISqglINDTSTGFALI 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 218 LWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCS----------IANSYYAALLHL 287
Cdd:PRK08668 198 VFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGtklfsefgtyRGVPLFNYILAW 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 288 CAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLK 367
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKIS 357
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2501516734 368 YMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSA 409
Cdd:PRK08668 358 EMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
163-407 |
3.72e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 77.68 E-value: 3.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 163 YGSSNKLLAS-LRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPAlqkllwALLILAMLVKLPSWPLHSWLPH 241
Cdd:PRK07234 136 YPRTDRAIWVgLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAF------ALIALGLLVKGGIFVSGLWLPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 242 AHSEAPSVGSVLLAALVLKLSCYGILRylaplCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALV 321
Cdd:PRK07234 210 THSEAEPPVSALLSGVVVKAGVFPLVR-----CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 322 LLGCSICSFSSIlgclmllwAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLaslanMALPSTSNFVA 401
Cdd:PRK07234 285 LAAPLVGGLYAL--------AHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASFSI-----AGFPLLAGFVS 351
|
....*.
gi 2501516734 402 ELLILS 407
Cdd:PRK07234 352 KVLTLK 357
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
179-425 |
1.41e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.31 E-value: 1.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 179 TMLGSVAFLIALMSIAASSGSFNIAALAYvpiAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALV 258
Cdd:PRK08667 171 TQLSTVFLMLGIIVLFIQTGSFELSPLGA---SAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVM 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 259 LKLSCYGILRYLAPLCSiANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSI----------- 327
Cdd:PRK08667 248 LKVAVYGLVRFLMDVLS-PELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvygldt 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 328 CSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILS 407
Cdd:PRK08667 327 LALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
250
....*....|....*...
gi 2501516734 408 SAYKSSLELSCLMALSML 425
Cdd:PRK08667 407 SFFQSFSVADPLIKILLF 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
141-355 |
3.78e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 74.42 E-value: 3.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVP--IAPALQKLL 218
Cdd:PRK08377 129 DIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAgtIDPTVAQVG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLApLCSIANSYYAAL--LHLCAFISLLYA 296
Cdd:PRK08377 209 LALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILY-LMQNANGWSSVLklVIIMATLTVFFA 287
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIG 355
Cdd:PRK08377 288 ELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVG 346
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
181-413 |
6.47e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 71.07 E-value: 6.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 181 LGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLK 260
Cdd:PRK06521 175 AGALAILLAFGLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLK 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 261 LSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSIC-----------S 329
Cdd:PRK06521 255 VAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllA 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 330 FSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSA 409
Cdd:PRK06521 335 ALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSL 414
|
....
gi 2501516734 410 YKSS 413
Cdd:PRK06521 415 LSSP 418
|
|
| 2a6301s04 |
TIGR00944 |
Multicomponent K+:H+antiporter; [Transport and binding proteins, Cations and iron carrying ... |
141-438 |
1.13e-11 |
|
Multicomponent K+:H+antiporter; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 130019 [Multi-domain] Cd Length: 463 Bit Score: 66.73 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALA-----YVPIAPALQ 215
Cdd:TIGR00944 126 DLFNLFVFFEMMLAASYGLLVHGSTKIQLKEGLKYIAVNLVSSALFVIGVSLLYGVAGTLNMADLStklaaLEPRSRGLV 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 216 KLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLY 295
Cdd:TIGR00944 206 EMGSALLGVVFLVKAGMFPLSFWLPTAYYAPPPPIAAVFGALLTKVGIYAIIRLHLLVFGTAAGFGHEWLVTLAMLTIIF 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 296 ASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIA 375
Cdd:TIGR00944 286 GGIGVLAYQNMGKIAGYNVLVAVGVILAGVALGTDGMLAGAIYYLVHDMLTKGALFLLIGLVIRGTGTATLEAYGGLIKR 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2501516734 376 MPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMalsMLFSGAYALWLYSRI 438
Cdd:TIGR00944 366 YPVLGWCFFICALSLAGIPPLSGFIGKFAIISGLFDMGDWTYVTL---LLLSSLAVLYSVNRI 425
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-410 |
2.69e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.50 E-value: 2.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYgsSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPI-----APALQ 215
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFR--NDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenPTVVA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 216 KLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSvGSVLLAALVLKLSCYGILRYLAPL--CSIANSYYAALLHLCAFISL 293
Cdd:PRK08376 220 KIALALFIAGLAMKSGAVPVHMWLPDAYPAAPS-SISAMLLVIKQAGLYALARVLFSIygPAINLATVGWVIIILGCLTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 294 LYASLAALRQLDGKRLIAYSSIAHMALVLLGCSI------------CSFSSILGCLMLLWAHALSAALLFYLIGNMYERT 361
Cdd:PRK08376 299 FVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVglaalgdpamasYGEIALAGGIYHIVNHALYKALLFLTAGAVIYET 378
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2501516734 362 HTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAY 410
Cdd:PRK08376 379 GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
186-355 |
3.46e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.16 E-value: 3.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 186 FLIALMSIAASSGSFN---IAALAYVpIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLS 262
Cdd:PRK08676 174 FLFSLTRQALGTGTLNwteLAAHASL-LSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 263 CYGILRYLAPLC-SIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLW 341
Cdd:PRK08676 253 IYGILRLSALLRqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
170
....*....|....
gi 2501516734 342 AHALSAALLFYLIG 355
Cdd:PRK08676 333 AHSLVKSGLFFSAG 346
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
166-409 |
1.29e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 63.02 E-value: 1.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 166 SNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALqklLWALLILAMLVKLPSWPLHSWLPHAHSE 245
Cdd:MTH00062 118 SERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLI---VYYVLSFMFITKVPLFPFHTWLPIVHAE 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 246 APSVGSVLLAALVLKLSCYGILRYlapLCSIANSYYAALLHLCAFISLLYAsLAALRQLDGKRLIAYSSIAHMALVLLGC 325
Cdd:MTH00062 195 ASSPVSIFLSGYIMKLGLLGVYRF---CGFIFSGSFLGYLFLCCLFSVFFL-ITACSELDGKRWLAFLSLSHILVPVLGL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 326 SICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLI 405
Cdd:MTH00062 271 FVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFL 350
|
....
gi 2501516734 406 LSSA 409
Cdd:MTH00062 351 VSSS 354
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-435 |
7.32e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.99 E-value: 7.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 184 VAFLIALMSIAASSGSFNIAALAYVPIAPALqklLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSC 263
Cdd:PRK06589 181 LLFLPAVILIYTKTGNLDFVSGGLFSKNQSI---ILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 264 YGILRYLAPLCSIANSYYAA----LLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLML 339
Cdd:PRK06589 258 FCIYKILLYIFGLSYLQRIFaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILH 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 340 LWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCL 419
Cdd:PRK06589 338 LVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSI 417
|
250
....*....|....*.
gi 2501516734 420 MALSMLFSGAYALWLY 435
Cdd:PRK06589 418 IVMLVVIASSILSALY 433
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
143-426 |
8.64e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 60.76 E-value: 8.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 143 LFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPiaPALQKLLWALL 222
Cdd:PRK06525 136 LGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLH--GSLKYLVFLGI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 223 ILAMLVKLPSWPLHSWLPHAhSEAPS-VGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLhLCAFISLLYASLAAL 301
Cdd:PRK06525 214 LFAAWGKSAQLPFYSWLPDA-MEAPTpASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGA-VMAIVTLLYGFLMYL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 302 RQLDGKRLIAYSSIAHMALVLLGCSICSFSSIL---GCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPL 378
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLaleGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPL 371
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2501516734 379 WSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMALSMLF 426
Cdd:PRK06525 372 VGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
141-400 |
4.03e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 59.29 E-value: 4.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLlASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPI---APALQKL 217
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTV 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 218 LWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIAnsYYAALLHLCAFISLLYAS 297
Cdd:PRK12650 210 VAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA--VWNWLLIIVGMITALMGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 298 LAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMP 377
Cdd:PRK12650 288 VFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP 367
|
250 260
....*....|....*....|...
gi 2501516734 378 LWSLLFLLASLANMALPSTSNFV 400
Cdd:PRK12650 368 FTFVSVTIAALSMAAVPPLFGFV 390
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
177-438 |
4.61e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 58.63 E-value: 4.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 177 LYTMLGSVAFLIALMSIAASSGSFNIAALAyvPIAPALQKLLWALLILAMLV-----KLPSWPLHSWLPHAhSEAPSVGS 251
Cdd:COG1009 169 LVTRVGDLGLLLGILLLGAIAGTLNFSELL--AAAPTILSSPLLTLILLLLLlgafgKSAQFPLHFWLPDA-MEGPTPVS 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 252 vllaalvlklscyGILR---------YLAPLCSIANSYYAALLHLCAFI---SLLYASLAALRQLDGKRLIAYSSIAHMA 319
Cdd:COG1009 246 -------------ALLHaatmvkagvYLLARLSPLFALSPVWLTVVAIIgaiTALFAALIALAQTDIKRVLAYSTVSQLG 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 320 LVLLGCSIcsfSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNF 399
Cdd:COG1009 313 YMFLALGV---GAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGF 389
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2501516734 400 VAELLILSSAYKSSLELSCLMALSML---FSGAYALWLYSRI 438
Cdd:COG1009 390 FSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLV 431
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
178-438 |
1.26e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 57.27 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 178 YTMLGSVAFLIALMSIA---ASSGSFNIAALA----YVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVG 250
Cdd:TIGR01770 158 YFILGAFSSGLLLFGISliyGFTGSLNFEDLLlflsNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPV 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 251 SVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSF 330
Cdd:TIGR01770 238 TAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 331 SSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM--PLWSLLFLLASLANMALPSTSNFVAELLILSS 408
Cdd:TIGR01770 318 EGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEYISDFAGLFKtnPILAILILIFMFSLAGIPPLAGFFGKFYVFFA 397
|
250 260 270
....*....|....*....|....*....|
gi 2501516734 409 AYKSSLelsCLMALSMLFSGAYALWLYSRI 438
Cdd:TIGR01770 398 LLKSGL---YWLAVIAVLTSVIGAFYYLRV 424
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-355 |
5.02e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 55.36 E-value: 5.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALA--YVPIAPALQKLL 218
Cdd:PRK12665 132 DLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAvrLDELPSGTRTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILR---YLAPLCSIANsyyaaLLHLCAFISLLY 295
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRthtLLFPGGGLDT-----LLMVVALLTMVV 286
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 296 ASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIG 355
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVG 346
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
221-354 |
5.91e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 54.65 E-value: 5.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVgsvllaaLVLKLSCYGILRYLAPLCSIANSyyAALLHLCAFISLLYASLAA 300
Cdd:MTH00196 100 LIIVALLFKLSVAPFHMWAPDVYEGAPTK-------TTALLAIVPKLGIFSILVSIGLN--VNILLIGGLFSLFVGAIGA 170
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLI 354
Cdd:MTH00196 171 LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSII 224
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
221-340 |
1.35e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 53.87 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPHAHSEAPSVgSVLLAALVLKLSCYGILRYLAPLCSIansyyaalLHLCAFISLLYASLAA 300
Cdd:MTH00199 195 LITISLLFKLSAAPFHMWAPDVYEGAPTI-TTALLATVPKIGVFSILVQIGPVTNV--------VLICAVLSIIYGAIGA 265
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLL 340
Cdd:MTH00199 266 LNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYM 305
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-422 |
3.45e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 52.64 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAyVPIAPALQKLLWA 220
Cdd:PRK07691 129 DIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIS-VKIAELSAGQTGL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAML------VKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLL 294
Cdd:PRK07691 208 ITVVAILflfvfaTKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 295 YASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAII 374
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIK 367
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2501516734 375 AMPLWSLLFLLASLANMALPSTSNFVAELLILSSAYKSSLELSCLMAL 422
Cdd:PRK07691 368 RYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
178-357 |
8.23e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 51.27 E-value: 8.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 178 YTMLGSVAFLIALMSIA---ASSGSFNIAALA-YVPIAPALQKLLW---ALLILAMLVKLPSWPLHSWLPHAHSEAPSVG 250
Cdd:COG1007 158 YFLLGALSSGFLLYGISllyGATGSLNLAGIAaALAAGGANSPLLLlglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPV 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 251 SVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSF 330
Cdd:COG1007 238 TAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTP 317
|
170 180
....*....|....*....|....*..
gi 2501516734 331 SSILGCLMLLWAHALSAALLFYLIGNM 357
Cdd:COG1007 318 LGVSAALFYLLAYLFMNLGAFAVILLL 344
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
167-412 |
1.89e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.12 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 167 NKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAML---VKLPSWPLHSWLPHAH 243
Cdd:PRK12662 157 KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAY 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 244 SEAPSVGSVLLAALVLKLSCYGILR-----YLAPLCSIANSYYAALLHLcAFISLLYASLAALRQLDGKRLIAYSSIAHM 318
Cdd:PRK12662 237 SEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLPFNNVFMIL-AALAIVFGSVLAILSKDIKRIFAYSSISHI 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 319 ALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSN 398
Cdd:PRK12662 316 GYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSG 395
|
250
....*....|....
gi 2501516734 399 FVAELLILSSAYKS 412
Cdd:PRK12662 396 FVAKWYILDAFIKS 409
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
163-364 |
2.30e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.06 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 163 YGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAML---VKLPSWPLHSWL 239
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLgafTKSAQFPFHIWL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 240 PHAHSEAPSVGSVLLAALVLKLSCYGILRYlAPLCSIANSYyAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAH-- 317
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRF-TPLLGLSNMY-IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlg 311
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2501516734 318 --MALVLLGCSICSFSS----------ILGCLMLLWAHALSAALLFYLIGNMYERTHTR 364
Cdd:PRK12646 312 miMAMVGIGGGYAQHQQdaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTR 370
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
178-354 |
2.87e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.35 E-value: 2.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 178 YTMLGSVA---FLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAMLV----KLPSWPLHSWLPHAHSEAPSVG 250
Cdd:PRK05777 159 YFVLGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVglafKLSAVPFHMWTPDVYEGAPTPV 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 251 SVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGcsicsf 330
Cdd:PRK05777 239 TAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVG------ 312
|
170 180
....*....|....*....|....
gi 2501516734 331 ssilgcLMLLWAHALSAALLFYLI 354
Cdd:PRK05777 313 ------LAAGTAEGYSAVLFYLLA 330
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
181-432 |
5.94e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.59 E-value: 5.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 181 LGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAALVLK 260
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 261 LSCYGILRyLAPLCSIANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGC-----------SICS 329
Cdd:PRK08042 225 IGLLGILT-LSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLgagvtgialeqPALI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 330 FSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLILSSA 409
Cdd:PRK08042 304 ALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSF 383
|
250 260 270
....*....|....*....|....*....|
gi 2501516734 410 YKSSLE-------LSCLMALSMLFSGAYAL 432
Cdd:PRK08042 384 FKLSNSgafvarlLGPLLAVGLAITGALAV 413
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
217-333 |
6.29e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 45.62 E-value: 6.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVGSVLLAAlvlklscygILRYLAPLCSIANSYYAALLHLCAFISLLYA 296
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAI---------IPKFTVYILLTSLVITSKLLLSVAIISLVVG 370
|
90 100 110
....*....|....*....|....*....|....*..
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSI 333
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESL 407
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
171-401 |
1.37e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.53 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 171 ASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAHSEAPSVG 250
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 251 SVLLAALVLKLSCYGILRyLAPLCSIANSYYAALLHLCAFiSLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSICSF 330
Cdd:PRK12644 238 AYLHAAAMVKAGIYLVAR-LAPGFADVPVWRPTVLVLGLA-TMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTR 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2501516734 331 SSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVA 401
Cdd:PRK12644 316 DAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVA 386
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
141-409 |
1.52e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.17 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 141 DMLFFFVLFEAALLPLLVMLLLYGSSNKLLASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAyVPIAPALQK---- 216
Cdd:PRK12663 129 DLFNLYVWFEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIA-MRLNDMGDTatlt 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 217 LLWALLILAMLVKLPSWPLHsWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYA 296
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 297 SLAALRQLDGKRLIAYSSIAHMALVLLGCSICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAM 376
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKE 366
|
250 260 270
....*....|....*....|....*....|...
gi 2501516734 377 PLWSLLFLLASLANMALPSTSNFVAELLILSSA 409
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGA 399
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
182-369 |
3.64e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 42.97 E-value: 3.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 182 GSVAFLIALMSIAASSGSFNIAALAY----VPIAPALQKLLWALLILAMLVKLPSWPLHSWLPHAhSEAPSVGSVLLAAL 257
Cdd:PRK07390 183 GDLLLLMGVVALSPLAGTLNFSDLAAwaatANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSV 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 258 VLKLSCYGILRyLAPLCSIANSYYAALLHLCAfISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCSIcsfSSILGCL 337
Cdd:PRK07390 262 VVATGAWVLIK-LQPVLALSPVALTVLIVIGT-VTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGL---QQPDIAL 336
|
170 180 190
....*....|....*....|....*....|..
gi 2501516734 338 MLLWAHALSAALLFYLIGNMYERTHTRLLKYM 369
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILTTITQDLTEL 368
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
171-247 |
3.98e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.92 E-value: 3.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 171 ASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAY-VPIAPALQKLLW----ALLILAMLVKLPSWPLHSWLPHAHSE 245
Cdd:PRK12666 160 AGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQrIAQLPAADRALLeagaALLLVVFLIKAAMWPLNFWLPPAYAA 239
|
..
gi 2501516734 246 AP 247
Cdd:PRK12666 240 AS 241
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
171-416 |
4.25e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.98 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 171 ASLRLVLYTMLGSVAFLIALMSIAASSGSFNIAALAYVPIAPALQKLLWALLILAML---VKLPSWPLHSWLPHAhSEAP 247
Cdd:PRK12647 147 AALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGgafTKSAQFPFHFWLPNA-MEAP 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 248 S-VGSVLLAALVLKLSCYGILRyLAPLCSiANSYYAALLHLCAFISLLYASLAALRQLDGKRLIAYSSIAHMALVLLGCS 326
Cdd:PRK12647 226 TpVSAYLHSATMVKAGIYLLAR-LNPVLG-GTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLG 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 327 ICSFSSILGCLMLLWAHALSAALLFYLIGNMYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNFVAELLIl 406
Cdd:PRK12647 304 LGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELI- 382
|
250
....*....|
gi 2501516734 407 ssaYKSSLEL 416
Cdd:PRK12647 383 ---YEALLEA 389
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
219-365 |
8.34e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.08 E-value: 8.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 219 WALLILAM--LVKLPSWPLH--SWLPHAHSEAPSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLL 294
Cdd:PRK06459 159 VPLILASFgfIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSIL 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 295 YASLAALRQLDGKRLIAYSSIAHMA--LVLLGCSICSFS--------SILGCLMLLWAHALSAALLFYLIGNMYERTHTR 364
Cdd:PRK06459 239 FGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTKQlitsiehfSLITVILYSFAHSVAKTGLFLSSGLQEKQSITY 318
|
.
gi 2501516734 365 L 365
Cdd:PRK06459 319 S 319
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
171-412 |
1.31e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 41.50 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 171 ASLRLVLYTMLGSVAFLIALMSIAASSGSFNiaalaYVPIAPALQKLLWALLILAMLV-------KLPSWPLHSWLPHAH 243
Cdd:TIGR01974 166 AAIKAFVVNRVGDFGLLLGIFLIFWYFGTLN-----FQEVFALAPGAFFSALTLICLLlfigamgKSAQLPLHTWLPDAM 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 244 SEAPSVGSVLLAALVLKLSCYGILRyLAPLCSIANSyyaaLLHLCAFI---SLLYASLAALRQLDGKRLIAYSSIAHMAL 320
Cdd:TIGR01974 241 EGPTPVSALIHAATMVTAGVYLVAR-TSPLFELSPT----ALYLVTIIgaiTALFAATVALVQNDIKRILAYSTMSQLGY 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 321 VLLGCSICSFSSilgCLMLLWAHALSAALLFYLIGN-MYERTHTRLLKYMRAAIIAMPLWSLLFLLASLANMALPSTSNF 399
Cdd:TIGR01974 316 MFLALGVGAYAA---AIFHLMTHAFFKALLFLGAGSvIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGF 392
|
250
....*....|...
gi 2501516734 400 VAELLILSSAYKS 412
Cdd:TIGR01974 393 FSKDLILEAAFAS 405
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
221-340 |
2.52e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.91 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2501516734 221 LLILAMLVKLPSWPLHSWLPhahseapSVGSVLLAALVLKLSCYGILRYLAPLCSIANSYYAALLHLCAFISLLYASLAA 300
Cdd:MTH00041 97 IITLALALKLGLAPCHFWFP-------DVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGG 169
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2501516734 301 LRQLDGKRLIAYSSIAHMALVllgCSICSFSSILGCLMLL 340
Cdd:MTH00041 170 LNQTQTRKILAFSSIAHLGWI---IITSAYSPNASIIMFL 206
|
|
| |
