NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2484573965|gb|WFU63466|]
View 

maleylacetoacetate isomerase [Bradyrhizobium brasilense]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
maiA super family cl36856
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
2-213 2.39e-88

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


The actual alignment was detected with superfamily member TIGR01262:

Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 259.18  E-value: 2.39e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   2 QFFSFWRSLASFRVRVALNLKGVAADVVFVDLDAD-AHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTP 80
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDgEQRSPEFLALNPQGLVPTLD-IDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  81 PLLPADALGRARVRGLALIVACEGHPLLTPRVRRYLDRELDLRDSQQNAWRRHWTVETLAALEGHLAGHkaTGRFCHGDA 160
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPH--AGRFCVGDT 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2484573965 161 PTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQPDTP 213
Cdd:TIGR01262 158 PTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
 
Name Accession Description Interval E-value
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
2-213 2.39e-88

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 259.18  E-value: 2.39e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   2 QFFSFWRSLASFRVRVALNLKGVAADVVFVDLDAD-AHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTP 80
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDgEQRSPEFLALNPQGLVPTLD-IDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  81 PLLPADALGRARVRGLALIVACEGHPLLTPRVRRYLDRELDLRDSQQNAWRRHWTVETLAALEGHLAGHkaTGRFCHGDA 160
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPH--AGRFCVGDT 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2484573965 161 PTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQPDTP 213
Cdd:TIGR01262 158 PTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-211 1.11e-56

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 178.55  E-value: 1.11e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTP 80
Cdd:COG0625     2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYPEP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  81 PLLPADALGRARVRGLALIVACEGHPLLTPRVRRYLDReldlRDSQQNAWRRHWTVETLAALEGHLAGhkatGRFCHGDA 160
Cdd:COG0625    81 PLLPADPAARARVRQWLAWADGDLHPALRNLLERLAPE----KDPAAIARARAELARLLAVLEARLAG----GPYLAGDR 152
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2484573965 161 PTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQPD 211
Cdd:COG0625   153 FSIADIALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
GST_C_Zeta cd03191
C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione ...
90-209 8.07e-46

C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 198300 [Multi-domain]  Cd Length: 121  Bit Score: 148.11  E-value: 8.07e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  90 RARVRGLALIVACEGHPLLTPRVRRYLDRELDLRDSQQNAWRRHWTVETLAALEGHLAGHkaTGRFCHGDAPTLADICLV 169
Cdd:cd03191     4 RARVRAIALIIACDIHPLQNLRVLKYLTEKLGVSEEEKLAWAQHWIERGFQALEKLLAST--AGKYCVGDEPTLADICLV 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 2484573965 170 GHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQ 209
Cdd:cd03191    82 PQVYNARRFGVDLSPYPTIVRINEACLELPAFQAAHPENQ 121
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
12-76 2.13e-14

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 65.34  E-value: 2.13e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484573965  12 SFRVRVALNLKGVAADVVFVDLDaDAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLDET 76
Cdd:pfam13409   5 SHRVRLALEEKGLPYEIELVDLD-PKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLEEL 68
PRK15113 PRK15113
glutathione transferase;
2-94 1.78e-11

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 61.13  E-value: 1.78e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   2 QFFSFWrslaSFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGTvLFQSLAIIDWLDETFPTPP 81
Cdd:PRK15113   13 HFFSPY----VMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFE-LSESSAIAEYLEERFAPPA 87
                          90
                  ....*....|....*.
gi 2484573965  82 ---LLPADALGRARVR 94
Cdd:PRK15113   88 werIYPADLQARARAR 103
 
Name Accession Description Interval E-value
maiA TIGR01262
maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and ...
2-213 2.39e-88

maleylacetoacetate isomerase; Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273527 [Multi-domain]  Cd Length: 210  Bit Score: 259.18  E-value: 2.39e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   2 QFFSFWRSLASFRVRVALNLKGVAADVVFVDLDAD-AHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTP 80
Cdd:TIGR01262   1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDgEQRSPEFLALNPQGLVPTLD-IDGEVLTQSLAIIEYLEETYPDP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  81 PLLPADALGRARVRGLALIVACEGHPLLTPRVRRYLDRELDLRDSQQNAWRRHWTVETLAALEGHLAGHkaTGRFCHGDA 160
Cdd:TIGR01262  80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPH--AGRFCVGDT 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2484573965 161 PTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQPDTP 213
Cdd:TIGR01262 158 PTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
1-211 1.11e-56

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 178.55  E-value: 1.11e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTP 80
Cdd:COG0625     2 MKLYGSPPSPNSRRVRIALEEKGLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLV-DDGLVLTESLAILEYLAERYPEP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  81 PLLPADALGRARVRGLALIVACEGHPLLTPRVRRYLDReldlRDSQQNAWRRHWTVETLAALEGHLAGhkatGRFCHGDA 160
Cdd:COG0625    81 PLLPADPAARARVRQWLAWADGDLHPALRNLLERLAPE----KDPAAIARARAELARLLAVLEARLAG----GPYLAGDR 152
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2484573965 161 PTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQPD 211
Cdd:COG0625   153 FSIADIALAPVLRRLDRLGLDLADYPNLAAWLARLAARPAFQRALAAAEPD 203
GST_C_Zeta cd03191
C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione ...
90-209 8.07e-46

C-terminal, alpha helical domain of Class Zeta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 198300 [Multi-domain]  Cd Length: 121  Bit Score: 148.11  E-value: 8.07e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  90 RARVRGLALIVACEGHPLLTPRVRRYLDRELDLRDSQQNAWRRHWTVETLAALEGHLAGHkaTGRFCHGDAPTLADICLV 169
Cdd:cd03191     4 RARVRAIALIIACDIHPLQNLRVLKYLTEKLGVSEEEKLAWAQHWIERGFQALEKLLAST--AGKYCVGDEPTLADICLV 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 2484573965 170 GHVTAAINQQISLSPWPTVKRIHETAMALPEFAKAHPSAQ 209
Cdd:cd03191    82 PQVYNARRFGVDLSPYPTIVRINEACLELPAFQAAHPENQ 121
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
1-74 9.42e-32

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 110.35  E-value: 9.42e-32
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLD 74
Cdd:cd03042     1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLV-IDGLVLTQSLAIIEYLD 73
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
1-74 4.19e-18

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 75.30  E-value: 4.19e-18
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHrtDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLD 74
Cdd:cd00570     1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQ--EEFLALNPLGKVPVLE-DGGLVLTESLAILEYLA 71
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
11-78 4.02e-16

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 70.26  E-value: 4.02e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2484573965  11 ASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLDETFP 78
Cdd:cd03057    10 CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
1-73 4.21e-15

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 67.60  E-value: 4.21e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWL 73
Cdd:cd03056     1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLE-LDGRVLAESNAILVYL 72
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
12-76 2.13e-14

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 65.34  E-value: 2.13e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484573965  12 SFRVRVALNLKGVAADVVFVDLDaDAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLDET 76
Cdd:pfam13409   5 SHRVRLALEEKGLPYEIELVDLD-PKDKPPELLALNPLGTVPVLVLPDGTVLTDSLVILEYLEEL 68
GST_N_3 pfam13417
Glutathione S-transferase, N-terminal domain;
14-81 4.59e-14

Glutathione S-transferase, N-terminal domain;


Pssm-ID: 433190 [Multi-domain]  Cd Length: 75  Bit Score: 64.56  E-value: 4.59e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2484573965  14 RVRVALNLKGVaaDVVFVDLDADAHRtDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFPTPP 81
Cdd:pfam13417  12 RVRIALNEKGL--PYEFVPIPPGDHP-PELLAKNPLGKVPVLE-DDGGILCESLAIIDYLEELYPGPP 75
GST_N_GTT2_like cd03051
GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly ...
1-74 6.49e-14

GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 239349 [Multi-domain]  Cd Length: 74  Bit Score: 64.24  E-value: 6.49e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLD 74
Cdd:cd03051     1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
12-78 5.04e-12

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 59.44  E-value: 5.04e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484573965  12 SFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETFP 78
Cdd:cd03046    11 SFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLV-DGDLVLTESAAIILYLAEKYG 76
PRK15113 PRK15113
glutathione transferase;
2-94 1.78e-11

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 61.13  E-value: 1.78e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   2 QFFSFWrslaSFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGTvLFQSLAIIDWLDETFPTPP 81
Cdd:PRK15113   13 HFFSPY----VMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFE-LSESSAIAEYLEERFAPPA 87
                          90
                  ....*....|....*.
gi 2484573965  82 ---LLPADALGRARVR 94
Cdd:PRK15113   88 werIYPADLQARARAR 103
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
4-75 2.14e-11

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 57.70  E-value: 2.14e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2484573965   4 FSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDE 75
Cdd:pfam02798   6 YGIRGSPRAHRIRWLLAEKGVEYEIVPLDFGAGPEKSPELLKLNPLGKVPALE-DGGKKLTESRAILEYIAR 76
sspA PRK09481
stringent starvation protein A; Provisional
1-94 4.87e-11

stringent starvation protein A; Provisional


Pssm-ID: 236537 [Multi-domain]  Cd Length: 211  Bit Score: 59.72  E-value: 4.87e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLD---ADAHrtdayrKINPQMALPALVtDDGTVLFQSLAIIDWLDETF 77
Cdd:PRK09481   11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDnlpQDLI------DLNPYQSVPTLV-DRELTLYESRIIMEYLDERF 83
                          90
                  ....*....|....*..
gi 2484573965  78 PTPPLLPADALGRARVR 94
Cdd:PRK09481   84 PHPPLMPVYPVARGESR 100
PRK10357 PRK10357
putative glutathione S-transferase; Provisional
47-171 1.86e-09

putative glutathione S-transferase; Provisional


Pssm-ID: 182405 [Multi-domain]  Cd Length: 202  Bit Score: 55.50  E-value: 1.86e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  47 NPQMALPALVTDDGTVLFQSLAIIDWLDETFPTPPLLPADALGRARVRGL-ALIVACEGHPLLTPRVRRyldRELDLRDS 125
Cdd:PRK10357   44 NPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLAALRVRQLeALADGIMDAALVSVREQA---RPAAQQSE 120
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2484573965 126 QQNAWRRHWTVETLAALEGHLAGHKatgrfCHGDAPTLADI---CLVGH 171
Cdd:PRK10357  121 DELLRQREKINRSLDALEGYLVDGT-----LKTDTVNLATIaiaCAVGY 164
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
1-75 3.93e-09

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 51.50  E-value: 3.93e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDE 75
Cdd:cd03053     2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALE-DGDLKLFESRAITRYLAE 75
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
13-79 7.05e-08

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 48.31  E-value: 7.05e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2484573965  13 FRVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGT--VLFQSLAIIDWLDETFPT 79
Cdd:cd03048    13 FKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTplTVFESGAILLYLAEKYDK 81
GST_N_SspA cd03059
GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP) ...
1-77 3.76e-07

GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.


Pssm-ID: 239357 [Multi-domain]  Cd Length: 73  Bit Score: 46.17  E-value: 3.76e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484573965   1 MQFFSFWRSLASFRVRVALNLKGVAADVVFVDLDadaHRTDAYRKINPQMALPALVTDDgTVLFQSLAIIDWLDETF 77
Cdd:cd03059     1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRD-LVLYESRIIMEYLDERF 73
GST_N_Omega cd03055
GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
14-74 6.07e-07

GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega GST genes may be associated with the development of some types of cancer and the age-at-onset of both Alzheimer's and Parkinson's diseases.


Pssm-ID: 239353 [Multi-domain]  Cd Length: 89  Bit Score: 46.19  E-value: 6.07e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2484573965  14 RVRVALNLKGVAADVVFVDLDadaHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLD 74
Cdd:cd03055    32 RARLVLAAKNIPHEVININLK---DKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89
GST_N_Delta_Epsilon cd03045
GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved ...
17-73 1.23e-06

GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 239343 [Multi-domain]  Cd Length: 74  Bit Score: 44.90  E-value: 1.23e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2484573965  17 VALNLK--GVAADVVFVDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWL 73
Cdd:cd03045    15 VLLTAKalGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLV-DNGFVLWESHAILIYL 72
GST_N_EF1Bgamma cd03044
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part ...
12-69 2.68e-06

GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.


Pssm-ID: 239342 [Multi-domain]  Cd Length: 75  Bit Score: 43.78  E-value: 2.68e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2484573965  12 SFRVRVALNLKGVAADVVFVDLdADAHRTDAYRKINPQMALPALVTDDGTVLFQSLAI 69
Cdd:cd03044    12 SLKILAAAKYNGLDVEIVDFQP-GKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAI 68
GST_N_etherase_LigE cd03038
GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas ...
14-78 5.34e-06

GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.


Pssm-ID: 239336 [Multi-domain]  Cd Length: 84  Bit Score: 43.10  E-value: 5.34e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484573965  14 RVRVALNLKGVAADVVFVDLdADAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLDETFP 78
Cdd:cd03038    21 KTRLALNHKGLEYKTVPVEF-PDIPPILGELTSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84
GST_N_Tau cd03058
GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
6-77 1.92e-05

GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin, responses to soil stresses and responses to auxin and cytokinin hormones.


Pssm-ID: 239356 [Multi-domain]  Cd Length: 74  Bit Score: 41.49  E-value: 1.92e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2484573965   6 FWRSLASFRVRVALNLKGVAADVVFVDLDAdahRTDAYRKINP-QMALPALVTDDGTVLfQSLAIIDWLDETF 77
Cdd:cd03058     6 AWASPFVLRVRIALALKGVPYEYVEEDLGN---KSELLLASNPvHKKIPVLLHNGKPIC-ESLIIVEYIDEAW 74
GST_N_3 cd03049
GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with ...
15-74 4.31e-05

GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239347 [Multi-domain]  Cd Length: 73  Bit Score: 40.32  E-value: 4.31e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  15 VRVALNLKGVAADVVFVDLDADAhRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDWLD 74
Cdd:cd03049    15 VRVAAHETGLGDDVELVLVNPWS-DDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
137-204 6.36e-05

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 40.98  E-value: 6.36e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2484573965 137 ETLAALEGHLAGHKatgrFCHGDAPTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKA 204
Cdd:cd03177    45 EALEFLETFLEGSD----YVAGDQLTIADLSLVATVSTLEVVGFDLSKYPNVAAWYERLKALPPGEEE 108
GST_C_YfcG_like cd10291
C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and ...
142-204 7.51e-05

C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YfcG-like subfamily; composed of the Escherichia coli YfcG and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YfcG is one of nine GST homologs in Escherichia coli. It is expressed predominantly during the late stationary phase where the predominant form of GSH is glutathionylspermidine (GspSH), suggesting that YfcG might interact with GspSH. It has very low or no GSH transferase or peroxidase activity, but displays a unique disulfide bond reductase activity that is comparable to thioredoxins (TRXs) and glutaredoxins (GRXs). However, unlike TRXs and GRXs, YfcG does not contain a redox active cysteine residue and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YcfG reveals a bound GSSG molecule in its active site. The actual physiological substrates for YfcG are yet to be identified.


Pssm-ID: 198324 [Multi-domain]  Cd Length: 110  Bit Score: 40.71  E-value: 7.51e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2484573965 142 LEGHLAGHKatgrFCHGDAPTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEFAKA 204
Cdd:cd10291    52 LDRRLAKSK----YLAGDEYSIADIAIWPWVARHEWQGIDLADFPNLKRWFERLAARPAVQKG 110
PLN02395 PLN02395
glutathione S-transferase
14-166 1.18e-04

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 41.77  E-value: 1.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  14 RVRVALNLKGVAADVVFVDLDADAHRTDAYRKINPQMALPALVTDDGTvLFQSLAIIDWLDETFPT--PPLLPADALGRA 91
Cdd:PLN02395   15 RALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYK-IFESRAIMRYYAEKYRSqgPDLLGKTIEERG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  92 RVRGLALIVACEGHP--------LLTPRVRRYLDRELDLRDSQQNawrrhwTVETLAALEGHLAGHKatgrFCHGDAPTL 163
Cdd:PLN02395   94 QVEQWLDVEATSYHPpllnltlhILFASKMGFPADEKVIKESEEK------LAKVLDVYEARLSKSK----YLAGDFVSL 163

                  ...
gi 2484573965 164 ADI 166
Cdd:PLN02395  164 ADL 166
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
31-77 1.35e-04

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 39.15  E-value: 1.35e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2484573965  31 VDLDADAHRTDAYRKINPQMALPALVtDDGTVLFQSLAIIDWLDETF 77
Cdd:cd03050    31 IDLRKGEQLTPEFKKINPFGKVPAIV-DGDFTLAESVAILRYLARKF 76
GST_C_7 cd03206
C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; ...
139-201 2.08e-04

C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198315 [Multi-domain]  Cd Length: 100  Bit Score: 39.13  E-value: 2.08e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2484573965 139 LAALEGHLAGHkatgRFCHGDAPTLADICLVGHVTAAINQQISLSPWPTVKRIHETAMALPEF 201
Cdd:cd03206    42 LRLLDQHLAGR----DWLAGDRPTIADVACYPYIALAPEGGVSLEPYPAIRAWLARVEALPGF 100
PRK10542 PRK10542
glutathionine S-transferase; Provisional
27-125 2.18e-04

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 40.82  E-value: 2.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484573965  27 DVVFVDLDADAHRT---DAYRKINPQMALPALVTDDGTVLFQSLAIIDWLDETFPTPPLL-PADALGRARVRGLALIVAC 102
Cdd:PRK10542   24 DFTLVSVDLAKKRLengDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLaPVGSLSRYHTIEWLNYIAT 103
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2484573965 103 EGH----PLLTPR--------VRRYLDRELDLRDS 125
Cdd:PRK10542  104 ELHkgftPLFRPDtpeeykptVRAQLEKKFQYVDE 138
GST_N_GRX2 cd03037
GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. ...
14-75 4.69e-03

GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.


Pssm-ID: 239335 [Multi-domain]  Cd Length: 71  Bit Score: 34.68  E-value: 4.69e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2484573965  14 RVRVALNLKGVAADVVFVDLDADAHRTdayRKINPQMaLPALVTDDGTVLFQSLAIIDWLDE 75
Cdd:cd03037    14 KARMIAGLKNIPVEQIILQNDDEATPI---RMIGAKQ-VPILEKDDGSFMAESLDIVAFIDE 71
GST_N_Omega_like cd03060
GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to ...
4-72 7.74e-03

GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism.


Pssm-ID: 239358 [Multi-domain]  Cd Length: 71  Bit Score: 34.26  E-value: 7.74e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2484573965   4 FSFWRSLASFRVRVALNLKGVAADVVFVDLdadAHRTDAYRKINPQMALPALVTDDGTVLFQSLAIIDW 72
Cdd:cd03060     4 YSFRRCPYAMRARMALLLAGITVELREVEL---KNKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRW 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH