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Conserved domains on  [gi|2445487527|gb|WDE42013|]
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cytochrome b, partial (mitochondrion) [Proteus anguinus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl31791
cytochrome b; Provisional
 1-46 9.71e-21

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00074:

Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 81.65  E-value: 9.71e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLDL 46
Cdd:MTH00074  335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
 
Name Accession Description Interval E-value
CYTB MTH00074
cytochrome b; Provisional
 1-46 9.71e-21

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 81.65  E-value: 9.71e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLDL 46
Cdd:MTH00074  335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
1-25 6.53e-05

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 36.30  E-value: 6.53e-05
                          10        20
                  ....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALY 25
Cdd:pfam00032  77 VLGWLGKQPPTGPYTLLGQIATVYY 101
 
Name Accession Description Interval E-value
CYTB MTH00074
cytochrome b; Provisional
 1-46 9.71e-21

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 81.65  E-value: 9.71e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLDL 46
Cdd:MTH00074  335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00131
cytochrome b; Provisional
 1-45 1.89e-20

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 80.85  E-value: 1.89e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLD 45
Cdd:MTH00131  334 ILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
CYTB MTH00119
cytochrome b; Provisional
 1-46 3.88e-19

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 77.25  E-value: 3.88e-19
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLDL 46
Cdd:MTH00119  335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00100
cytochrome b; Provisional
 1-44 7.38e-18

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 73.90  E-value: 7.38e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLL 44
Cdd:MTH00100  334 TLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
CYTB MTH00034
cytochrome b; Validated
 1-44 1.26e-14

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 64.73  E-value: 1.26e-14
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLL 44
Cdd:MTH00034  334 ILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00053
cytochrome b; Provisional
 1-46 1.72e-14

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 64.34  E-value: 1.72e-14
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLLDL 46
Cdd:MTH00053  335 LLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLKL 380
CYTB MTH00022
cytochrome b; Validated
 1-44 5.35e-13

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 60.10  E-value: 5.35e-13
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPLAGWAENKLL 44
Cdd:MTH00022  333 LLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
CYTB MTH00191
cytochrome b; Provisional
 1-35 2.12e-12

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 58.39  E-value: 2.12e-12
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIALIPL 35
Cdd:MTH00191  331 LLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00145
cytochrome b; Provisional
 1-45 4.33e-11

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 54.91  E-value: 4.33e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIaLIPLAGWAENKLLD 45
Cdd:MTH00145  335 ILTWIGACPVEEPYETIGQVFTVLYFLFFL-ILPLVQKLWDNILD 378
CYTB MTH00156
cytochrome b; Provisional
 2-30 1.44e-08

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 47.85  E-value: 1.44e-08
                          10        20
                  ....*....|....*....|....*....
gi 2445487527   2 LTWIGGQPVEHPFIQIGQAASALYFLLFI 30
Cdd:MTH00156  325 LTWIGARPVEEPYILTGQILTILYFLYFI 353
CYTB MTH00224
cytochrome b; Provisional
 1-30 2.87e-07

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 44.14  E-value: 2.87e-07
                          10        20        30
                  ....*....|....*....|....*....|
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFI 30
Cdd:MTH00224  335 ILTWIGGRPVEDPFEGIGQVFTILYFSYFI 364
CYTB MTH00016
cytochrome b; Validated
 1-45 3.30e-07

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 43.90  E-value: 3.30e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIaLIPLAGWAENKLLD 45
Cdd:MTH00016  335 LLTWIGGRPVEPPYEFLGQIFTVFYFFYFM-INPLLMKLWDKLLK 378
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
1-25 6.53e-05

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 36.30  E-value: 6.53e-05
                          10        20
                  ....*....|....*....|....*
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALY 25
Cdd:pfam00032  77 VLGWLGKQPPTGPYTLLGQIATVYY 101
CYTB MTH00086
cytochrome b; Provisional
 1-32 1.59e-04

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 36.46  E-value: 1.59e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 2445487527   1 VLTWIGGQPVEHPFIQIGQAASALYFLLFIAL 32
Cdd:MTH00086  319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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