|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 688.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 660.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWTSlNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFT-NKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 653.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNlSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKP-PYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 628.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWtSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSL-NFSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGWT 459
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 531.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 3 KILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 83 KHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 163 VALLLLQNTSGTLSLLTLHYtnpLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 243 GMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 323 TSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2293412058 403 ITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELI 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.48e-174 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 497.19 E-value: 1.48e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTML-EPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIA 319
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 320 HGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGS 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2293412058 400 GTLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELI 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
8.20e-130 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 382.96 E-value: 8.20e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLwpmtlLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRqrMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKNNYSN--LFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLhytnplTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLL------NFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-458 |
4.33e-127 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 374.95 E-value: 4.33e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 49 SWTSLNLFMATDSLSTPLLVLTCWLLPLMILASQKhtTSEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYtnpLTLSSYADKLWWAGCLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISS---LRKLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 289 YSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 369 ALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|
gi 2293412058 449 VLKPELIWGW 458
Cdd:MTH00150 407 ILKSDLLFMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
2.59e-117 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 351.35 E-value: 2.59e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAwLLKPNWLWPMTLLYSFCISLTSLSWLKNLSeTSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRqrMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 161 LLVALLLLQNTSGTLSLLTLHYTNPltlSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPP---SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 241 GYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 321 GLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2293412058 401 TLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
36-455 |
2.38e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 340.80 E-value: 2.38e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 36 LTSLSWLKNLSETSWTSLNLFMatDSLSTPLLVLTCWLLPLMILASQKhtTSEPLSRQRMYISLLTSLQFFLILAFSATE 115
Cdd:MTH00205 34 FSSFFFSNSFLMTSFISSSFSF--DSLSLPLIMLSFWISLLMVLASYK--VFKSNKNSKLFTVSVIMLLLILILSFSVDN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 116 LVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLltlHYTNPLTLSSYADKL 195
Cdd:MTH00205 110 LLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSM---FFNFPLNFSDFYLFL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 196 WWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGS 275
Cdd:MTH00205 187 YWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGM 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPL 355
Cdd:MTH00205 267 ICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPF 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 356 MATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREH 435
Cdd:MTH00205 347 LVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREY 426
|
410 420
....*....|....*....|
gi 2293412058 436 LLIALHLTPLMLLVLKPELI 455
Cdd:MTH00205 427 YILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
53-450 |
8.44e-90 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 281.58 E-value: 8.44e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 53 LNLFMATDSLSTPLLVLTCWLLPLMILASQKHTTSeplsRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLI 132
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLV--ALLLLQNTSGTLSLLTLHYTNpltLSSYADKLWWAGCLLAFLVKMPL 210
Cdd:COG1008 150 LIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVaiLALYFLAGALTFDIAELAAAP---LPLTAQLLLFLAFFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 211 YGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPL-TKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAY 289
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 290 SSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLA 369
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 370 LPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIAlhltPLMLLV 449
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLA----PLAALI 461
|
.
gi 2293412058 450 L 450
Cdd:COG1008 462 L 462
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-450 |
5.08e-82 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 261.68 E-value: 5.08e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 53 LNLFMATDSLSTPLLVLTCWLLPLMILASQKHTTSeplsRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLI 132
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 133 IITRWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQNTSGTLSLLTLHYTNpltLSSYADKLWWAGCLLAFLVKM 208
Cdd:PRK05846 150 LIGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLP---LPPGVQYWLFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPL-TKELSYPLIIFALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 288 AYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLAN 367
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 368 LALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHMIALEPSHTREHLLIAlhltPLML 447
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVA 461
|
...
gi 2293412058 448 LVL 450
Cdd:PRK05846 462 LLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-459 |
6.90e-79 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 252.94 E-value: 6.90e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 53 LNLFMATDSLSTPLLVLTCWLLPLMILASQKhttsEPLSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLI 132
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWE----SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 133 IITRWGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNTSG-TLSLLTLhytNPLTLSSYADKLWWAGCLLAFLVKMPLY 211
Cdd:TIGR01972 145 LIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL---LNLPLPFGVQTWLFLAFFIAFAVKVPLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRM-MTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 291 SVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLAL 370
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 371 PPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHMIA-LEPSHTREHLLIALHLTPLMLLV 449
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAeFPDLNGREIAVLAPLVVLILFLG 460
|
410
....*....|
gi 2293412058 450 LKPELIWGWT 459
Cdd:TIGR01972 461 LYPNPLLDLT 470
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
54-412 |
3.34e-76 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 246.13 E-value: 3.34e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 54 NLFMATDSLSTPLLVLTCWLLPLMILASQKHTTSeplsRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLII 133
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 134 ITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLhyTNpLTLSSYADKLWWAGCLLAFLVKMPLYGV 213
Cdd:MTH00204 152 IGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL--LN-IKLPLSIQKWLLVGFFLSLAVKIPQIPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLII-FALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:MTH00204 229 HIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 293 SHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPP 372
Cdd:MTH00204 309 AHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2293412058 373 LPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMF 412
Cdd:MTH00204 389 SCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
55-412 |
1.25e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 231.48 E-value: 1.25e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 55 LFMATDSLSTPLLVLTCWLLPLMILASQKHTTSepLSRQrmYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIII 134
Cdd:MTH00217 74 VVFAVDGISIFFLILTALLTPICILISWNSIKF--LIKE--FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHytnPLTLSSYADKLWWAGCLLAFLVKMPLYGVH 214
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKELQYFIFLGFFLSLAIKIPKIPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLI-IFALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00217 227 IWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 294 HMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPL 373
Cdd:MTH00217 307 HMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLS 386
|
330 340 350
....*....|....*....|....*....|....*....
gi 2293412058 374 PNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMF 412
Cdd:MTH00217 387 CNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-410 |
1.36e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 221.72 E-value: 1.36e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 55 LFMATDSLSTPLLVLTCWLLPLMILASQKHTTSeplsRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIII 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPLtLSSYADKLWWAGCLLAFLVKMPLYGVH 214
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHV-VSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPL-TKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 294 HMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 2293412058 374 PNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLY 410
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
9.35e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.94 E-value: 9.35e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 113 ATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPLTLSSYA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLA-NTNYERTHSRTMVLARGLQV 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2293412058 352 TLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-382 |
1.41e-51 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 181.77 E-value: 1.41e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 53 LNLFMATDSLSTPLLVLTCWLLPLMILASQKHTtseplSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLI 132
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT-----RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSL----LTL-HYTNPLTLSSYAdklwwaGCLLAFLVK 207
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAkSYPLALELLLYA------GFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 208 MPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRM-MTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSL 286
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 287 IAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLA 366
Cdd:PRK12561 279 LAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMA 358
|
330
....*....|....*.
gi 2293412058 367 NLALPPLPNLMGELMI 382
Cdd:PRK12561 359 SLALPGMSGFVSELTV 374
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
1.15e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 166.86 E-value: 1.15e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 60 DSLSTPLLVLTCWLLPLMILASQKHTTSEplSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 140 QtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPlTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPK 219
Cdd:COG0651 153 K-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA-ELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 220 AHVEAPIAGSMILAAVLLKLGGYGMIRMMTML--EPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 298 VAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2293412058 378 GELMIITSLFD-WSWWTLALTGSGTLITAGYSLYMFLMTQ 416
Cdd:COG0651 391 SKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-455 |
2.42e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 159.87 E-value: 2.42e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 38 SLSWLKNLSetswtsLNLFMATDSLSTPLLVLTCWLLPLMILASQKhttseplsrqrmyISLLTSLQFFLILA------- 110
Cdd:PRK02546 70 SYSWLPQLG------LTWSVGADGLSMPLILLTGFITTLAVLAAWP-------------VTFKPKLFYFLMLAmyggqia 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 111 -FSATELVMFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHytnpLTLS 189
Cdd:PRK02546 131 vFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTA----LAAK 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 190 SYADK---LWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYP-LIIF 265
Cdd:PRK02546 206 DFGLGfqlLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 266 ALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVL 345
Cdd:PRK02546 286 GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 346 ARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLA-------LTGSGTLITAGYSLYM----FLM 414
Cdd:PRK02546 366 MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPfrvvvvfLAAVGVILTPIYLLSMlreiFFG 445
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2293412058 415 TQRGPLPTH--MIALEPshtREHLLIALHLTPLMLLVLKPELI 455
Cdd:PRK02546 446 PENKELVSHekLVDAEP---REVFIIACLLVPIIGIGLYPKLV 485
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
1.38e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 155.06 E-value: 1.38e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 99 LLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSL-PLLVALLLLQNTSGTLSL 177
Cdd:MTH00094 67 LSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFpFLFVYLKNFFFFSLCYFD 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 178 LTLHYTNPLTLSsyadklwwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLtke 257
Cdd:MTH00094 147 FFLSWEMFFILS------------LSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 258 LSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293412058 338 THSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLY 410
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
5.11e-42 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 155.49 E-value: 5.11e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 60 DSLSTPLLVLTCWLLPLMILASQkhttsePLSRQrmyisllTSLQFFLILA--------FSATELVMFYVMFEATLIPTL 131
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRN-------SRLFYFLMLAmysgqiglFSSRDLLLFFIMWELELIPVY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 132 IIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQ---NTSGTLSLLTL-HYTNPLTLssyaDKLWWAGCLLAFLVK 207
Cdd:CHL00011 150 LLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLaNQSYPVAL----EILFYIGFLIAYAVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 208 MPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRM-MTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSL 286
Cdd:CHL00011 225 LPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKR 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 287 IAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERThsRTMVLAR--GLQVTLPLMATWWFISS 364
Cdd:CHL00011 305 IAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFS 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2293412058 365 LANLALPPLPNLMGELM----IITS---LFDWSWWTLALTGSGTLITAGYSLYM 411
Cdd:CHL00011 383 MASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
23-459 |
7.00e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 138.68 E-value: 7.00e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 23 LWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILASqkhttSEPLSRQRMYISLLTS 102
Cdd:PRK06473 41 LLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 103 LQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGtLSLLTLHY 182
Cdd:PRK06473 116 LNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSG-ASSFDYEP 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 183 TNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYP- 261
Cdd:PRK06473 194 LRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPw 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 262 LIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK06473 274 LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 342 TMVLARGL---QVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLITAGYSLYMFLMTQRG 418
Cdd:PRK06473 354 DVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFG 433
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2293412058 419 PLPTHMIALEPSHTREHLLIALHLTPLMLLVLKPELIWGWT 459
Cdd:PRK06473 434 RLTAELSNLPRVLWSERLPALVLAVLIVVLGIQPSWLVRWT 474
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
5.76e-31 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 115.31 E-value: 5.76e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 1 MLKILIPTLMLIPTAWLLKPNWLWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2293412058 81 SQKHTTSEPLSRQRMYISLLTSLQFFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
23-387 |
1.77e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 117.51 E-value: 1.77e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 23 LWPMTLLYSFCISLTSLSWLKNLSETSWTSLNLFMATDSLSTPLLVLTCWLLPLMILASqkhttSEPLSRQRMYISLLTS 102
Cdd:PRK07363 41 AWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 103 LQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLlTLHY 182
Cdd:PRK07363 116 INGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDA 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 183 TNPLTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPL 262
Cdd:PRK07363 194 ISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 263 IifALWGVI--MTGS-ICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTH 339
Cdd:PRK07363 274 L--AIIGTIsvIYGAlSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVG 351
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2293412058 340 SRTMVLARGLQVT---LPLMATWWFISSLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK07363 352 TRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-450 |
2.57e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 117.38 E-value: 2.57e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 60 DSLSTPLLVLTCWLLPLMILASQKHTTSEplSRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 140 QTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTL-----SLLTLHYTNPLTLSSYADKLWWAGCLLA-----FLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 210 LYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTM-------LEPLTKELSYPLIIFALWGVIMTGSICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 283 LKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFI 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 363 SSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGsgtLITAGYSL-YMFLMTQRGPLPTHMIALEPSHtREHLLIALH 441
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL---LIASAISLvGYFRAWYSLFFGKPKSGEEVEH-KESPSMSVV 474
|
....*....
gi 2293412058 442 LTPLMLLVL 450
Cdd:PRK12667 475 ILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-407 |
4.59e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 113.44 E-value: 4.59e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 58 ATDSLSTPLLVLTCWLLPLMILASQkhTTSEPlsRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITRW 137
Cdd:PRK08375 74 RADSLSALFLLVTSILAIAALLYAI--GYGEH--RQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 138 GNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPltlssyADKLWWAG---CLLAFLVKMPLYGVH 214
Cdd:PRK08375 150 GDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 215 LWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMM----TMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 291 SVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLAL 370
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350
....*....|....*....|....*....|....*...
gi 2293412058 371 PPLPNLMGELMIITSLFD-WSWWTLALTGSGTLITAGY 407
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-396 |
3.37e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 107.71 E-value: 3.37e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIR--MMTMLEPLTKELSYPLIIFALWGVIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 279 RQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMAT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*...
gi 2293412058 359 WWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLAL 396
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
110-426 |
4.48e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 83.46 E-value: 4.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 110 AFSATELVMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLS-------LLTLHY 182
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmahiamrLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 183 TNPLTLSSyadklwwAGCLLAFLVKMPLYGVHlWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPL 262
Cdd:PRK12663 203 TATLTTIA-------LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 263 IIFALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12663 275 LATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 342 TMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFD-WSWWTLALTGSGTLITAgYSLY--MFLM---- 414
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDnGAYILLALMLITSLITM-YSLFriFFLAywgd 433
|
330
....*....|....*..
gi 2293412058 415 -----TQRGPLPTHMIA 426
Cdd:PRK12663 434 kdgeeVNFKPIPLYRKL 450
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
6.86e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 83.09 E-value: 6.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 109 LAFSATELVMFYVMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSL--LTLHYTNpl 186
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDE-- 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 187 tLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPlTKELSYPLIIFA 266
Cdd:PRK12665 203 -LPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 267 LWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLA 346
Cdd:PRK12665 281 LLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRL 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2293412058 347 RGLQVTLPLMATWWFISSLaNLA-LPPLPNLMGELMIITS-LFDWSWWTLALTGsGTLITAGYSLY 410
Cdd:PRK12665 361 GGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALVA-GGVVTSLLTLY 424
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
1.44e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 82.09 E-value: 1.44e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 50 WTSLNLFMATDSLSTPLLVLTCWLLPLMILASQKHTTSEPLSRQRMYISLLTSLQFF-LILAFSATELVMFYVMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPLTlssyadKLWWAGCLLAFLVKM 208
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLepLTKELSYPLIIF------ALWGVIMTgsicLRQTD 282
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV--LSPELWWGVLILlagsisALLGVIYA----LKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 283 LKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLM-----------IAHGLTSSALFCLANTNYERTHSRTMVLARGLQV 351
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 2293412058 352 TLPLMATWWFISSLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-414 |
1.82e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.34 E-value: 1.82e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEP--LTKELSYPLIIFALWGVIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQsgAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 279 RQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLA---NTNYERTHSRTMVLARGLQvtlPL 355
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---PV 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2293412058 356 MATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTgSGTLITAGYSLYMFLM 414
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLL 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
1.30e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 78.84 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 91 SRQRMYISLLTSLQFFLILAFSATELVMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 171 TSGTLSLLTLHYTNPLTLssyadklwwAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTM 250
Cdd:PRK07234 170 ANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 251 LEPLTKELSYPLIIFALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVAGGiliqspwGLTGALtLMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2293412058 331 ANTNYERTHSRTMVLARGLQVTLPLMatwwfISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGSGTLIT 404
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-450 |
4.64e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.50 E-value: 4.64e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRMMTMLEpLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 293 SHMGLVAGGILIQspwGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 373 LPNLMGELMIITSLFD---WSWWTLALTGSGTLITAGYSLYMFLMTQRGPLPTHmialEPSHTREHLliALHLTPLMLLV 449
Cdd:COG1009 386 FAGFFSKEAILEAALEaggLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK----TPKHPHESP--WLMTLPLVVLA 459
|
.
gi 2293412058 450 L 450
Cdd:COG1009 460 V 460
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
1.34e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 76.19 E-value: 1.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 111 FSATELVMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLaGSLPLLVALLLLQNTSGTLSLLTLhYTNPLTLSS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI-SQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 191 YADKLWWAGCLLAF-LVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLePLTKELS---------- 259
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvpl 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 260 --YPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYER 337
Cdd:PRK08668 271 fnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2293412058 338 THSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSL 386
Cdd:PRK08668 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
6.88e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.57 E-value: 6.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 76 LMILASQKHTTSEPLSRQRMyislltslqFFLILAFSATELVM------FYVMFEATLIpTLIIITRWGNQTERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDKYAM---------LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 150 FLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYTNPlTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGS 229
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAG-TIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPIT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 230 MILAAVLLKLGGYGMIRMMTMLEPLTKELSYP--LIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSP 307
Cdd:PRK08377 242 VMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 308 WGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
330 340
....*....|....*....|.
gi 2293412058 388 DWSW-WTLALTGSGTLITAGY 407
Cdd:PRK08377 402 SAGYtWPVALVLGASVVEAVY 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
53-373 |
1.59e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 69.69 E-value: 1.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 53 LNLFMATDSLST--PLLVLTCWLLPLMILASQKHTTSEPLSrqrmYISLLTSLQFFLILAFSATELVMFYVMFEATLIPT 130
Cdd:PRK12650 71 VNLALRADALSLffALLALVIGAVVFIYSARYLPRKKGNTS----FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 131 LIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQNTSGTLSLLTLhytnpLTLSSYADKLWWAGcLLAFLVKMPL 210
Cdd:PRK12650 147 FFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGI-----LHSDVWAEKPGLTT-VVAVLIAVAA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 211 YG------VHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKeLSYPLIIFALWGVIMTGSICLRQTDLK 284
Cdd:PRK12650 219 FTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 285 SLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISS 364
Cdd:PRK12650 298 KLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAA 377
|
....*....
gi 2293412058 365 LANLALPPL 373
Cdd:PRK12650 378 LSMAAVPPL 386
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-388 |
3.62e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.05 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSI-CLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIgAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 280 QTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180
....*....|....*....|....*....
gi 2293412058 360 WFISSLANLALPPLPNLMGELMIITSLFD 388
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTFE 404
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
196-387 |
1.12e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.84 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 196 WWAGC--LLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRM-MTMLEPLTKELSYPLIIF---- 265
Cdd:PRK06521 207 FWASLvfLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALgais 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 266 ALWGVIMTgsicLRQTDLKSLIAYSSVSHMGLV-----------AGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTN 334
Cdd:PRK06521 287 AVLGVLYA----LAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAV 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2293412058 335 YERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK06521 363 LHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-393 |
1.35e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 66.30 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 191 YADKLWWAGCLLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMM-----TMLEPLTKELSYPL 262
Cdd:PRK12662 203 PTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 263 IIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTK 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2293412058 343 MVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWSWWT 393
Cdd:PRK12662 363 LEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-429 |
4.06e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.73 E-value: 4.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 119 FYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLHYT---NPLTLSSYADKL 195
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKmseNPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 196 WWAGcllaFLVKMPLYGVHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGMIRMMTMLEPLT---KELSYPLIIFALWGVI 271
Cdd:PRK08376 226 FIAG----LAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 272 MTGSICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQSPWG---LTGALTLMIAHGLTSSALFCLANTNYERTH 339
Cdd:PRK08376 300 VGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETG 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 340 SRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITS--LFDWSWWTLALTGSgTLITAGYSLYMFLMTQR 417
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGS-VLTLASFVKVFHTAFFG 458
|
330
....*....|..
gi 2293412058 418 GPLPTHMIALEP 429
Cdd:PRK08376 459 PPSEKVMNVKEP 470
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
76-460 |
1.20e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.21 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 76 LMILASQKHTTSEPLSRQRMYISLLTSLQFFLILAfSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYT 154
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 155 LAgslpllvallllqntSGTL----SLL-----TLHYT---NPLTLSSYADKLWWAGCLL---AFLVKMPLYGVHLWLPK 219
Cdd:COG1007 164 LS---------------SGFLlygiSLLygatgSLNLAgiaAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 220 AHVEAPIAGSMILAAVLlKLGGYGM-IR-MMTMLEPLTKELSYPLIIFALwgVIMT-GSIC-LRQTDLKSLIAYSSVSHM 295
Cdd:COG1007 229 VYEGAPTPVTAFLATAP-KIAAFAAlLRlLVEAFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 296 GLVAGGILIQSPWGLTGALTLMIAHGLTSSALF-CLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLP 374
Cdd:COG1007 306 GYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTA 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 375 NLMGELMIITSLFDWSWWTLALTG-SGTLITAGYSLY-MFLMTQRGPLPTHMIALEPSHTrehLLIALHLTPLMLLVLKP 452
Cdd:COG1007 386 GFFGKFYVFSAAVEAGLYWLAVIAvLNSVISAYYYLRvVKAMYFDEPEEEAPISAPPGLR---VALVIAALLVLLLGIFP 462
|
....*...
gi 2293412058 453 ELIWGWTA 460
Cdd:COG1007 463 GPLLDLAA 470
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
1.50e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 62.63 E-value: 1.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 97 ISLLTSLqFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 177 LLTLHYTNPLTLSSYadklwWAGCLLaFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTK 256
Cdd:MTH00062 154 FSDWGSDDSVSLIVY-----YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 257 eLSYPLIIFALWGVIMTGSicLRQTDLKSLIAYSSVSHMgLVAGGILIQSPWGLTG-ALTLMIAHGLTSSALFCLANTNY 335
Cdd:MTH00062 228 -LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFY 303
|
250
....*....|
gi 2293412058 336 ERTHSRTMVL 345
Cdd:MTH00062 304 EVSGSRNWVL 313
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
94-449 |
1.78e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 63.24 E-value: 1.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 94 RMYISLLTsLQFFLILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSG 173
Cdd:PRK12646 111 RFYFYLTL-FMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 174 TLSLLTLhYTNPLTLSSYAdklWWAGCLLAFLV----KMPLYGVHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRMM 248
Cdd:PRK12646 190 TNNITEI-LGQADHIKNHG---LFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 249 TMLEpLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQSPWG---------LTGAL 314
Cdd:PRK12646 265 PLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAAL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 315 TLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSL-------- 386
Cdd:PRK12646 344 FHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsq 423
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2293412058 387 FDWSwWTLALTGSG---TLITAGYSLYMFLMTQRGPLPTHMIALEPSHtrEHLLIALHLTPLMLLV 449
Cdd:PRK12646 424 FSLI-SMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH--EPWLFSLPSLILMVLV 486
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
214-397 |
1.93e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 62.68 E-value: 1.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK06525 227 YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 293 SHMGLVAGGILIQ---SPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLA 369
Cdd:PRK06525 306 TQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
170 180 190
....*....|....*....|....*....|.
gi 2293412058 370 LPPLPNLMGELMIITSLFDWS---WWTLALT 397
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSveyWILLPAM 416
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
7.63e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.09 E-value: 7.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRMMTMLEPlTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLGG-TPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 293 SHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPP 372
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170 180 190
....*....|....*....|....*....|
gi 2293412058 373 LPNLMGELMIITSLFDWSWWTLALTGSGTL 402
Cdd:PRK12647 373 LFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-387 |
1.14e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.22 E-value: 1.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTK-----ELSYPLIIFALWGVIMTGS 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlqrifAEFNWLIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190
....*....|....*....|....*....|..
gi 2293412058 356 MATWWFISSLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAAS 408
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
208-388 |
1.42e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.23 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 208 MPLYGvhlWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK08042 197 IPLHG---WVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 288 AYSSVSHMGLV-----AG--GILIQSP----WGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLM 356
Cdd:PRK08042 274 AYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180 190
....*....|....*....|....*....|..
gi 2293412058 357 ATWWFISSLANLALPPLPNLMGELMIITSLFD 388
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
9.16e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 54.58 E-value: 9.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 60 DSLSTPLLVLTCWLLPLMILASQKHTTSEP-LSRQRMYISLLTslqFFLILAFSATELVMFYVMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFT---FLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 139 NQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTSGTLSLLTLH---YTNPLTLSSYADKLWWAGCLLAFLV--------- 206
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 207 --KMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMtmlePLTKELSYPLIIFALWGVI---MTGSICLRQT 281
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 282 DLKSLIAYSSVSHMGLVAGGILIQSPWGLtgALTLMIAHGLTSSALFCLA-----NTNYERTHSRTMvlaRGLQVTLPLM 356
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330 340
....*....|....*....|....*..
gi 2293412058 357 ATWWFISSLANLALPPLPNLMGELMII 383
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-450 |
9.64e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.54 E-value: 9.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMIRMMTMLEPLTkELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTV 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 293 SHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPP 372
Cdd:PRK12644 301 SQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 373 LPNLMGELMIITSLFD------WSWWTLALTGSGTLITAGYSL-YMFLMTQRGPLPTHMIALEPSHTREHLLIAlhlTPL 445
Cdd:PRK12644 381 LLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLrFLWGAFARKPGAFPSVAVTEMHRPSPLFLA---PPA 457
|
....*
gi 2293412058 446 MLLVL 450
Cdd:PRK12644 458 VLAVL 462
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
3.94e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 52.16 E-value: 3.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGMIRMMTMLEPLTKELSYPLIIFALWGV----IMTG 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 275 SI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLAN-----------------TNYE 336
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2293412058 337 RTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFD--------WSWWTLALTGSGTLI 403
Cdd:PRK12666 374 LDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
233-383 |
8.63e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.19 E-value: 8.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 233 AAVLLKLGGYGMIRMMTMLEPLTKELSY------PLIIFALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQS 306
Cdd:PRK06277 234 SALLQTFSKFVLVALMLVIFKLFGGLSYfpsaqgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT 313
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2293412058 307 PWGLTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMII 383
Cdd:PRK06277 314 PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
4.72e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.66 E-value: 4.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAHVEAPIAGSMILAAVLlKLGGYGMI-RMMTM-LEPLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 2293412058 292 VSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
85-381 |
5.36e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.06 E-value: 5.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 85 TTSEPLSRQRMYisLLTSLQFFLILAFSATELVMFyVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVA 164
Cdd:PRK12649 105 SHKEDLPRYYQY--LLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 165 LLLLQNTSGTLSLLTLHYTNPLTLSSYADKLWWAGCLLAFL------VKMPLYgvhLWLPKAhVEAPIAGSMIL-AAVLL 237
Cdd:PRK12649 182 FLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMV 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 238 KLGGYGMIRMmtmlEPLTKELSYPLIIFALWGVI---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGILIQSP-WGL 310
Cdd:PRK12649 258 KAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPgLGV 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2293412058 311 TGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELM 381
Cdd:PRK12649 334 AAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-456 |
5.51e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 48.41 E-value: 5.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMIR-MMTMLEPLTKELSYPLIIFALWGVIMTGSICLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRlFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 280 QTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALF-CLANT-NYERTHSRTMVLARGLQVTLPLMA 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 358 TWWFISSLANLALPPLPNLMGELMIITSLFDWSWWTLALTGS-GTLITAGYSL----YMFLMTQRGPLPTHmialePSHT 432
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVlTSVIGAFYYLrvvkVMYFDKPERRIPSN-----PQSK 444
|
250 260
....*....|....*....|....
gi 2293412058 433 REHLLIALHLTPLMLLVLKPELIW 456
Cdd:TIGR01770 445 AQSLLLSISALFILFLGLFPSLIL 468
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
9.14e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.15 E-value: 9.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 212 GVHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMIRMmtmlEPLTKELSYPLIIFALWG---VIMTGSICLRQTDLKSLI 287
Cdd:MTH00020 228 GLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRS----SPLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVI 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 288 AYSSVSHMG--LVAGGILIQSPwgltgALTLMIAHGLTSSALFCLANTN-YERTHSRTMVLARGLQVTLPLMATWWFISS 364
Cdd:MTH00020 303 AYSTCSQLGymVVACGLSHYSI-----SLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGS 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2293412058 365 LANLALPPLPNLMGELMIITSLFDWSWWTLA--LTGSGTLITAGYSLYMFLMT 415
Cdd:MTH00020 378 LSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
1.81e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.33 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 197 WAGCLLAFLVKM---------PLygvHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMIRMmtmlEPLTKELSYPLIIFA 266
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTPISaLIHAATMVAAGVFLVARM----YPVFEQFPAVMTVIA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 267 LWGVI---MTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPwglTGALTLMIAHGLTSSALFCLANT---------N 334
Cdd:PRK07376 296 WTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSvihgmeevvG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 335 YERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSLFDWS---WWTLALTGSgtlITAGYSLYM 411
Cdd:PRK07376 373 HDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANpalWFVGFLTAG---MTAFYMFRM 449
|
....*..
gi 2293412058 412 FLMTQRG 418
Cdd:PRK07376 450 YFLTFEG 456
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
6.14e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 45.29 E-value: 6.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 214 HLWLPKAhVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEpLTKELSYPLIIFALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 294 HMGLVAGGILIQSPwglTGALTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWWFISSLANLALPPL 373
Cdd:PRK07390 319 YLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPL 395
|
170 180
....*....|....*....|...
gi 2293412058 374 PNLMGELMIITSLFDWSWWTLAL 396
Cdd:PRK07390 396 GGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-386 |
6.93e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.02 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 108 ILAFSATELVMFYVMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAGSLPLLVALLLLQNTSGT-LSLLTLHYTNP 185
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 186 LTLSSYADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMIRMMTMLEPLtkelsypLIIF 265
Cdd:MTH00196 87 QSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSILVSIGLNVNI-------LLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 266 ALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQSPWGLTGALTLMIAHGLTSSALFCLA---NTNYErthsrT 342
Cdd:MTH00196 159 GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN-----L 233
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2293412058 343 MVLARGLQVTLPLMATWWFISSLANLALPPLPNLMGELMIITSL 386
Cdd:MTH00196 234 IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG 277
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-387 |
1.74e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 202 LAFLVKMPLYGVHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGMIRMMTMLEPLTKE-LSYPLIIFALWGVIMTGSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGyFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 279 RQTDLKSLIAYSSVSHMG--LVAGGILIQSP--------WGLTGALTLMIAHGLTSSALFCLANTnyerTHSRTMVLARG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKqlitsiehFSLITVILYSFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190
....*....|....*....|....*....|....*....
gi 2293412058 349 LQVTLPLMATWWFISSLAnlALPPLPNLMGELMIITSLF 387
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
6.36e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.80 E-value: 6.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGgygMIRMMTMLEPLTkELSYPLIIFALWGVIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLY-WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293412058 281 TDLKSLIAYSSVSHMGLVAGGILIQSPwgltgalTLMIAHGLTSSALFCLANTNYERTHSRTMVLARGLQVTLPLMATWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSW-------LMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIIS 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2293412058 361 FISSLAnlALPPLPNLMGELMIITSLFDWSWWTLALTG-SGTLITAGYSLYMFLM 414
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| |
