|
Name |
Accession |
Description |
Interval |
E-value |
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
19-386 |
2.50e-43 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 153.56 E-value: 2.50e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDlhkGSGQEAMKKAGLLQTYYDLALPM-GVNIAD-EKG 96
Cdd:COG0654 6 VLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALS---PRSLELLRRLGLWDRLLARGAPIrGIRVRDgSDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 97 NILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKI 174
Cdd:COG0654 83 RVLARFDAAETGLPAGLVVPRADLERALLEAARalGVELRFGTEVTGLEQDADGVTVTLADGRTLRADLVVGADGARSAV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 175 RSfvtdtqveetgtfniqadilqpeincpgffqlcngnrlmaghqgillfanpnnngalYLGISFKTpdewknkipLDFQ 254
Cdd:COG0654 163 RR---------------------------------------------------------LLGIGFTG---------RDYP 176
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 255 DRNSVADF---LLKRFSKWSEVYKQLI----RSVSTFQCLPTRKFPLNNdwksnrplpITMIGDAAHLMSPFAGQGVNTG 327
Cdd:COG0654 177 QRALWAGVrteLRARLAAAGPRLGELLelspRSAFPLRRRRAERWRRGR---------VVLLGDAAHTMHPLGGQGANLA 247
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 328 LLDALILSENLTNGEF-TSIENAIENYEQQMFVYAKDTQDESTENeTEMFSPNFSFQKLL 386
Cdd:COG0654 248 LRDAAALAWKLAAALRgRDDEAALARYERERRPRAARVQRAADAL-GRLFHPDSPPLRLL 306
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
18-355 |
9.11e-27 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 109.78 E-value: 9.11e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNdrEARIFGGTLdlhkGSGQEAMKKAGLlqtyYDLA---------LPmG 88
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNE--SVKEVGAGI----GIGDNVIKKLGN----HDLAkgiknagqiLS-T 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 89 VNIADEKGNILSTknVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILAN 168
Cdd:PRK06753 71 MNLLDDKGTLLNK--VKLKSNTLNVTLHRQTLIDIIKSYVKEDAIFTGKEVTKIENETDKVTIHFADGESEAFDLCIGAD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 169 GGMSKIRSFVT-DTQVEETGTFNIQADILQPEINCPGFFQLCNGNRlmaGHQGILLFanPNNNGALYLGISFKTPD-EWK 246
Cdd:PRK06753 149 GIHSKVRQSVNaDSKVRYQGYTCFRGLIDDIDLKLPDCAKEYWGTK---GRFGIVPL--LNNQAYWFITINAKERDpKYS 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 247 NKIPLDFQDR-NSVADFLLKRFSKWSEVyKQLIRSVSTFQclptrkfPLNNDWKSNrplpITMIGDAAHLMSPFAGQGVN 325
Cdd:PRK06753 224 SFGKPHLQAYfNHYPNEVREILDKQSET-GILHHDIYDLK-------PLKSFVYGR----IVLLGDAAHATTPNMGQGAG 291
|
330 340 350
....*....|....*....|....*....|
gi 2231426418 326 TGLLDALILSENLTNgefTSIENAIENYEQ 355
Cdd:PRK06753 292 QAMEDAIVLANCLNA---YDFEKALQRYDK 318
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
17-354 |
2.53e-16 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 79.53 E-value: 2.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLdlhKGSGQEAMKKAGLLQTYYDLALPM-GVNIADEK 95
Cdd:PRK06847 5 KKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITL---QGNALRALRELGVLDECLEAGFGFdGVDLFDPD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 96 GNILSTknvKPENRFDNPE------INRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILA 167
Cdd:PRK06847 82 GTLLAE---LPTPRLAGDDlpggggIMRPALARILADAARaaGADVRLGTTVTAIEQDDDGVTVTFSDGTTGRYDLVVGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 168 NGGMSKIRS--FVTDTQVEETGT----FNIQadiLQPEINCPGFFQlcnGNRLMAGhqgillfANPNNNGALYLGISFKT 241
Cdd:PRK06847 159 DGLYSKVRSlvFPDEPEPEYTGQgvwrAVLP---RPAEVDRSLMYL---GPTTKAG-------VVPLSEDLMYLFVTEPR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 242 PDewKNKIPLD-FQDRnsVADfLLKRFSkwSEVYKQLIRSVSTFQCLPTRKFP---LNNDWKSNRplpITMIGDAAHLMS 317
Cdd:PRK06847 226 PD--NPRIEPDtLAAL--LRE-LLAPFG--GPVLQELREQITDDAQVVYRPLEtllVPAPWHRGR---VVLIGDAAHATT 295
|
330 340 350
....*....|....*....|....*....|....*..
gi 2231426418 318 PFAGQGVNTGLLDALILSENLTNGEftSIENAIENYE 354
Cdd:PRK06847 296 PHLAQGAGMAIEDAIVLAEELARHD--SLEAALQAYY 330
|
|
| PRK05868 |
PRK05868 |
FAD-binding protein; |
17-371 |
1.78e-14 |
|
FAD-binding protein;
Pssm-ID: 180297 [Multi-domain] Cd Length: 372 Bit Score: 74.25 E-value: 1.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDndREARIFGGTLDLhKGSGQEAMKKAGLLQTYYDLALPM-GVNIADEK 95
Cdd:PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGYSVTMVERH--PGLRPGGQAIDV-RGPALDVLERMGLLAAAQEHKTRIrGASFVDRD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 96 GNILS--TKNVKPENRFDNPEIN--RNDLRAILLNSLENDT-VIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 170
Cdd:PRK05868 79 GNELFrdTESTPTGGPVNSPDIEllRDDLVELLYGATQPSVeYLFDDSISTLQDDGDSVRVTFERAAAREFDLVIGADGL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 171 MSKIRSFV---TDTQVEETGTFniqADILqpeiNCPGFFQL------CNGNRLMAGhqgiLLFANPNNNGALYLGIsfkt 241
Cdd:PRK05868 159 HSNVRRLVfgpEEQFVKRLGTH---AAIF----TVPNFLELdywqtwHYGDSTMAG----VYSARNNTEARAALAF---- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 242 pdeWKNKIPLDFQDRNSVADFLLKRFSKWSEVYKQLI---RSVSTFQCLPTRKFPLNNdWKSNRplpITMIGDAAHLMSP 318
Cdd:PRK05868 224 ---MDTELRIDYRDTEAQFAELQRRMAEDGWVRAQLLhymRSAPDFYFDEMSQILMDR-WSRGR---VALVGDAGYCCSP 296
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2231426418 319 FAGQGVNTGLLDALILSENL-TNGEftSIENAIENYEQQMFVYAKDTQDESTEN 371
Cdd:PRK05868 297 LSGQGTSVALLGAYILAGELkAAGD--DYQLGFANYHAEFHGFVERNQWLVSDN 348
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
19-331 |
9.01e-14 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 71.59 E-value: 9.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDrearifggTLDLHKGSGQ-----EAMKKAGLLQTYYDLALP---MGVN 90
Cdd:pfam01494 4 VLIVGGGPAGLMLALLLARAGVRVVLVERHAT--------TSVLPRAHGLnqrtmELLRQAGLEDRILAEGVPhegMGLA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 91 IADEKGNILSTKNVKPENRFDNPEinrNDLRAILLNSLEND--TVIWDRKLVMLEPGKKKWTLTFENKPSET-----ADL 163
Cdd:pfam01494 76 FYNTRRRADLDFLTSPPRVTVYPQ---TELEPILVEHAEARgaQVRFGTEVLSLEQDGDGVTAVVRDRRDGEeytvrAKY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 164 VILANGGMSKIRSFVtDTQVEETGT-----FNIQADILQPEINCPGFFQLCngnrlmaghqgiLLFANPNNNGALyLGIS 238
Cdd:pfam01494 153 LVGCDGGRSPVRKTL-GIEFEGFEGvpfgsLDVLFDAPDLSDPVERAFVHY------------LIYAPHSRGFMV-GPWR 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 239 FKTPDEWKNKIPLDFQDRNSVADFLLkrfskwsEVYKQLIRSVS-----TFQCLPTRKFPLN----NDWKSNRplpITMI 309
Cdd:pfam01494 219 SAGRERYYVQVPWDEEVEERPEEFTD-------EELKQRLRSIVgidlaLVEILWKSIWGVAsrvaTRYRKGR---VFLA 288
|
330 340
....*....|....*....|..
gi 2231426418 310 GDAAHLMSPFAGQGVNTGLLDA 331
Cdd:pfam01494 289 GDAAHIHPPTGGQGLNTAIQDA 310
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
19-335 |
2.56e-13 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 71.09 E-value: 2.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERdndrEARIFGG----TLDlhkgsgQEAMKkagLLQTyydlalpmgVNIADE 94
Cdd:PRK06183 13 VVIVGAGPVGLTLANLLGQYGVRVLVLER----WPTLYDLpravGID------DEALR---VLQA---------IGLADE 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 95 ----------------KGNILSTKNVKPE--------NRFDNPEINRNdLRAiLLNSLENDTVIWDRKLVMLEPGKKKWT 150
Cdd:PRK06183 71 vlphttpnhgmrfldaKGRCLAEIARPSTgefgwprrNAFHQPLLEAV-LRA-GLARFPHVRVRFGHEVTALTQDDDGVT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 151 LTFEN---KPSE-TADLVILANGGMSKIRSFVtDTQVEETGTFN----IQADILQPEINCPGFFQLCNGNR---LMAGHQ 219
Cdd:PRK06183 149 VTLTDadgQRETvRARYVVGCDGANSFVRRTL-GVPFEDLTFPErwlvVDVLIANDPLGGPHTYQYCDPARpytSVRLPH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 220 GILLFanpnnngalylgiSFKT-PDEwknkIPLDFQDRNSVADFLLKRFSKWSEVykQLIRS-VSTFQ-CLPTRkfplnn 296
Cdd:PRK06183 228 GRRRW-------------EFMLlPGE----TEEQLASPENVWRLLAPWGPTPDDA--ELIRHaVYTFHaRVADR------ 282
|
330 340 350
....*....|....*....|....*....|....*....
gi 2231426418 297 dWKSNRPLpitMIGDAAHLMSPFAGQGVNTGLLDALILS 335
Cdd:PRK06183 283 -WRSGRVL---LAGDAAHLMPPFAGQGMNSGIRDAANLA 317
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
18-342 |
1.48e-09 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 59.14 E-value: 1.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERdNDREAR---IFGG-TLDLHKGSgQEAMKKAGLLQTyydlalpmgvniad 93
Cdd:TIGR01988 1 DIVIVGGGMVGLALALALARSGLKVALIEA-TPLPAPadpGFDNrVSALSAAS-IRLLEKLGVWDK-------------- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 94 ekgniLSTKNVKP-------------ENRFDNPEINRNDL---------RAILLNSLEND---TVIWDRKLVMLEPGKKK 148
Cdd:TIGR01988 65 -----IEPARAQPirdihvsdggsfgALRFDADEIGLEALgyvvenrvlQQALWERLQELpnvTLLCPARVVELPRHSDH 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 149 WTLTFENKPSETADLVILANGGMSKIRSFvtdtqveetgtFNIQADILQPEincpgffQLCngnrLMAghqgILLFANPN 228
Cdd:TIGR01988 140 VELTLDDGQQLRARLLVGADGANSKVRQL-----------AGIPTTGWDYG-------QSA----VVA----NVKHERPH 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 229 NNGA----LYLG-ISFktpdewknkIPLdFQDRNSV--------ADFLL----KRFSKwsEVYKQLIRSVSTFQCLPTRK 291
Cdd:TIGR01988 194 QGTAwerfTPTGpLAL---------LPL-PDNRSSLvwtlppeeAERLLalsdEEFLA--ELQRAFGSRLGAITLVGERH 261
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2231426418 292 -FPLN----NDWKSNRplpITMIGDAAHLMSPFAGQGVNTGLLDALILSENLTNGE 342
Cdd:TIGR01988 262 aFPLSlthaKRYVAPR---LALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDAR 314
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
17-386 |
3.46e-08 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 54.74 E-value: 3.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNdrEARIFGGTLDLHkGSGQEAMKKAGLLQTYYDLALPM-GVNIADEK 95
Cdd:PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGHEPTLIERAP--ELRTGGYMVDFW-GVGYEVAKRMGITDQLREAGYQIeHVRSVDPT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 96 GNI---LSTKNVKPENRFDNPEINRNDLRAILLNSLENDT-VIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGM 171
Cdd:PRK07588 78 GRRkadLNVDSFRRMVGDDFTSLPRGDLAAAIYTAIDGQVeTIFDDSIATIDEHRDGVRVTFERGTPRDFDLVIGADGLH 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 172 SKIRS--FVTDTQVEE-----TGTFNIQADILQPEI-----NCPGF----FQLcNGNRLMAghqgILLFANPNNNGALyl 235
Cdd:PRK07588 158 SHVRRlvFGPERDFEHylgckVAACVVDGYRPRDERtyvlyNEVGRqvarVAL-RGDRTLF----LFIFRAEHDNPPL-- 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 236 gisfkTPDEWKNKIpldfqdRNSVADF------LLKRFSKWSEVYkqlIRSVSTFQcLPTrkfplnndWKSNRplpITMI 309
Cdd:PRK07588 231 -----TPAEEKQLL------RDQFGDVgwetpdILAALDDVEDLY---FDVVSQIR-MDR--------WSRGR---VALV 284
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2231426418 310 GDAAHLMSPFAGQGVNTGLLDALILSENLTNGEFTSIEnAIENYEQQMFVYAKDTQDESTENeTEMFSPNFSFQKLL 386
Cdd:PRK07588 285 GDAAACPSLLGGEGSGLAITEAYVLAGELARAGGDHRR-AFDAYEKRLRPFIAGKQAAAAKF-LSVFAPKTRFGLYV 359
|
|
| PRK05714 |
PRK05714 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
306-356 |
7.88e-08 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 168201 [Multi-domain] Cd Length: 405 Bit Score: 53.68 E-value: 7.88e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2231426418 306 ITMIGDAAHLMSPFAGQGVNTGLLDALILSENLTN----GEFTSIENAIENYEQQ 356
Cdd:PRK05714 287 LALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHaaerGERLADVRVLSRFERR 341
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
11-335 |
7.76e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 51.15 E-value: 7.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 11 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERdndREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPmgVN 90
Cdd:PRK06126 2 MENTSETPVLIVGGGPVGLALALDLGRRGVDSILVER---KDGTAFNPKANTTSARSMEHFRRLGIADEVRSAGLP--VD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 91 IADEkgNILSTKNVKPE-NRFDNP-----------------------EINRNDLRAILLN---SLENDTVIWDRKLVMLE 143
Cdd:PRK06126 77 YPTD--IAYFTRLTGYElARFRLPsareaitpvggpdgswpspelphRIPQKYLEPILLEhaaAQPGVTLRYGHRLTDFE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 144 PGKKKWTLTFENKPSET-----ADLVILANGGMSKIRSFVTDTQVEETGtfniqadiLQPEIN----CPGFFQLCNGNRl 214
Cdd:PRK06126 155 QDADGVTATVEDLDGGEsltirADYLVGCDGARSAVRRSLGISYEGTSG--------LQRDLSiyirAPGLAALVGHDP- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 215 maghqgillfanpnnnGALYLGISfktPDEWKNKIPLDFQDRnsvadFLLK--RFSK----WSEVykqliRSVSTFQCLP 288
Cdd:PRK06126 226 ----------------AWMYWLFN---PDRRGVLVAIDGRDE-----WLFHqlRGGEdeftIDDV-----DARAFVRRGV 276
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2231426418 289 TRKFPL----NNDWKSNRPLPITM-------IGDAAHLMSPFAGQGVNTGLLDALILS 335
Cdd:PRK06126 277 GEDIDYevlsVVPWTGRRLVADSYrrgrvflAGDAAHLFTPTGGYGMNTGIGDAVNLA 334
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
18-358 |
8.05e-07 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 50.68 E-value: 8.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNdREARIFGGtlDLHKGSGQEAMKKAGLL--------------QTYYDL 83
Cdd:PRK07045 7 DVLINGSGIAGVALAHLLGARGHSVTVVERAA-RNRAQNGA--DLLKPSGIGVVRAMGLLddvfaagglrrdamRLYHDK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 84 ALPMGVNI--ADEKGNILStknvkpenrfdnpeINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKW-----TLTFENK 156
Cdd:PRK07045 84 ELIASLDYrsASALGYFIL--------------IPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDAdgtvtSVTLSDG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 157 PSETADLVILANGGMSKIRSFVTDTQVEET--------GTFNIQADILQpeincpgffqlCNgnRLMAGHQGILLFANPN 228
Cdd:PRK07045 150 ERVAPTVLVGADGARSMIRDDVLRMPAERVpyatpmafGTIALTDSVRE-----------CN--RLYVDSNQGLAYFYPI 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 229 NNGALYLGISFktpdewknkiPLDfQDRNSVADF----LLKRFSKW----SEVYKQLIRSVSTFQCLPTRKFPLNNDWKS 300
Cdd:PRK07045 217 GDQATRLVVSF----------PAD-EMQGYLADTtrtkLLARLNEFvgdeSADAMAAIGAGTAFPLIPLGRMNLDRYHKR 285
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2231426418 301 NrplpITMIGDAAHLMSPFAGQGVNTGLLDALILSENLT---NGEFTsIENAIENYEQQMF 358
Cdd:PRK07045 286 N----VVLLGDAAHSIHPITGQGMNLAIEDAGELGACLDlhlSGQIA-LADALERFERIRR 341
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
18-338 |
9.42e-07 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 50.54 E-value: 9.42e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA-------RIFGGTLdlhkgSGQEAMKKAGL--------LQTYYD 82
Cdd:PRK08850 6 DVAIIGGGMVGLALAAALKESDLRIAVIEGQLPEEAlnelpdvRVSALSR-----SSEHILRNLGAwqgiearrAAPYIA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 83 lalpMGVNIADEKGNIlstknvkpenRFDNPEINRNDL------RAILL------NSLENDTVIWDRKLVMLEPGKKKWT 150
Cdd:PRK08850 81 ----MEVWEQDSFARI----------EFDAESMAQPDLghivenRVIQLalleqvQKQDNVTLLMPARCQSIAVGESEAW 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 151 LTFENKPSETADLVILANGGMSKIRSfvtdtqveetgtfniQADI-----------LQPEINCPGffQLCNGNRLMAGHQ 219
Cdd:PRK08850 147 LTLDNGQALTAKLVVGADGANSWLRR---------------QMDIplthwdyghsaLVANVRTVD--PHNSVARQIFTPQ 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 220 GILLF---ANPNnngalYLGISFKT-PDEWKNKIPLDFQDRNsvadfllKRFSKWSEVYKQLIRSVSTFQCLPTrKFPLN 295
Cdd:PRK08850 210 GPLAFlpmSEPN-----MSSIVWSTePLRAEALLAMSDEQFN-------KALTAEFDNRLGLCEVVGERQAFPL-KMRYA 276
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2231426418 296 NDWKSNRplpITMIGDAAHLMSPFAGQGVNTGLLDALILSENL 338
Cdd:PRK08850 277 RDFVRER---VALVGDAAHTIHPLAGQGVNLGLLDAASLAQEI 316
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
15-60 |
1.32e-06 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 50.16 E-value: 1.32e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDnDReariFGGTL 60
Cdd:PRK12810 142 TGKKVAVVGSGPAGLAAADQLARAGHKVTVFERA-DR----IGGLL 182
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
16-59 |
1.52e-06 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 49.86 E-value: 1.52e-06
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2231426418 16 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDreariFGGT 59
Cdd:COG2072 6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADD-----VGGT 44
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
17-105 |
1.85e-06 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 48.91 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFG-GTLDLHkGSG--QEAMKKAGLLQTyyDLALpmgVNIAD 93
Cdd:COG0569 96 MHVIIIGAGRVGRSLARELEEEGHDVVVIDKDPERVERLAEeDVLVIV-GDAtdEEVLEEAGIEDA--DAVI---AATGD 169
|
90
....*....|..
gi 2231426418 94 EKGNILSTKNVK 105
Cdd:COG0569 170 DEANILACLLAK 181
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
11-176 |
2.22e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 49.15 E-value: 2.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 11 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDndrearifGGTLDlHKGSG---QEAMKKAgLLQTYYDLALPM 87
Cdd:PRK07236 1 MTHMSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERS--------PTELD-GRGAGivlQPELLRA-LAEAGVALPADI 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 88 GVNIA-----DEKGNILStknvkpenRFDNPEI--NRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSET 160
Cdd:PRK07236 71 GVPSReriylDRDGRVVQ--------RRPMPQTqtSWNVLYRALRAAFPAERYHLGETLVGFEQDGDRVTARFADGRRET 142
|
170
....*....|....*.
gi 2231426418 161 ADLVILANGGMSKIRS 176
Cdd:PRK07236 143 ADLLVGADGGRSTVRA 158
|
|
| PRK08243 |
PRK08243 |
4-hydroxybenzoate 3-monooxygenase; Validated |
19-61 |
2.83e-06 |
|
4-hydroxybenzoate 3-monooxygenase; Validated
Pssm-ID: 236198 [Multi-domain] Cd Length: 392 Bit Score: 49.03 E-value: 2.83e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERdNDR---EARIFGGTLD 61
Cdd:PRK08243 5 VAIIGAGPAGLLLGQLLHLAGIDSVVLER-RSReyvEGRIRAGVLE 49
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
280-341 |
2.90e-06 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 48.98 E-value: 2.90e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2231426418 280 SVSTFQCLPTRKFPLN----NDWKSNRplpITMIGDAAHLMSPFAGQGVNTGLLDALILSENLTNG 341
Cdd:TIGR01989 308 RVIGVVDKSRAAFPLGlghaDEYVTKR---VALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEA 370
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
19-338 |
4.83e-06 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 48.33 E-value: 4.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERDN-------------------DR---------------EARIFGG-----T 59
Cdd:PRK08132 26 VVVVGAGPVGLALAIDLAQQGVPVVLLDDDDtlstgsraicfakrsleifDRlgcgermvdkgvswnVGKVFLRdeevyR 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 60 LDLHKGSGQE--AMKKaglLQTYY------DLALpmgvniadekgnilstknvkpenrfDNPEInrnDLRaillnslend 131
Cdd:PRK08132 106 FDLLPEPGHRrpAFIN---LQQYYvegylvERAQ-------------------------ALPNI---DLR---------- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 132 tviWDRKLVMLEPGKKKWTLTFENkPSET----ADLVILANGGMSKIRSFVtdtQVEETGT-----FNIqADILQ----- 197
Cdd:PRK08132 145 ---WKNKVTGLEQHDDGVTLTVET-PDGPytleADWVIACDGARSPLREML---GLEFEGRtfedrFLI-ADVKMkadfp 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 198 --------PEINcPGffqlcngnrlmaghQGILLFANPNNngalylgisfktpdEWKnkipLDFQ---DRNSVA----DF 262
Cdd:PRK08132 217 terwfwfdPPFH-PG--------------QSVLLHRQPDN--------------VWR----IDFQlgwDADPEAekkpEN 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 263 LLKR----------FSK-WSEVYkqlirsvsTFQCLPTRKFPLNNdwksnrplpITMIGDAAHLMSPFAGQGVNTGLLDA 331
Cdd:PRK08132 264 VIPRvrallgedvpFELeWVSVY--------TFQCRRMDRFRHGR---------VLFAGDAAHQVSPFGARGANSGIQDA 326
|
....*..
gi 2231426418 332 lilsENL 338
Cdd:PRK08132 327 ----DNL 329
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
17-58 |
6.10e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 47.96 E-value: 6.10e-06
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDreariFGG 58
Cdd:PRK07208 5 KSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPV-----VGG 41
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
309-342 |
6.24e-06 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 47.93 E-value: 6.24e-06
10 20 30
....*....|....*....|....*....|....*...
gi 2231426418 309 IGDAAHLMSPFAGQGVNTGLLDAL----ILSENLTNGE 342
Cdd:PRK06185 289 IGDAAHAMSPVGGVGINLAIQDAVaaanILAEPLRRGR 326
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
306-342 |
6.79e-06 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 47.64 E-value: 6.79e-06
10 20 30
....*....|....*....|....*....|....*..
gi 2231426418 306 ITMIGDAAHLMSPFAGQGVNTGLLDALILSENLTNGE 342
Cdd:PRK07608 282 VALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE 318
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
17-49 |
1.00e-05 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 47.13 E-value: 1.00e-05
10 20 30
....*....|....*....|....*....|...
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 49
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD 34
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
15-60 |
1.65e-05 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 46.67 E-value: 1.65e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDnDReariFGGTL 60
Cdd:COG0493 120 TGKKVAVVGSGPAGLAAAYQLARAGHEVTVFEAL-DK----PGGLL 160
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
21-50 |
1.99e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 42.13 E-value: 1.99e-05
10 20 30
....*....|....*....|....*....|
gi 2231426418 21 IIGGGPVGLTMAKLLQQNGIDVSVYERDND 50
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDR 30
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
18-50 |
2.32e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 46.03 E-value: 2.32e-05
10 20 30
....*....|....*....|....*....|...
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 50
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQ 33
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
15-47 |
2.37e-05 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 46.33 E-value: 2.37e-05
10 20 30
....*....|....*....|....*....|...
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK11749 139 TGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEA 171
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
15-47 |
2.61e-05 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 46.28 E-value: 2.61e-05
10 20 30
....*....|....*....|....*....|...
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDR 358
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
18-354 |
2.64e-05 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 45.92 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYErdnDREARIFGGTLDLHkgsgqeaMKKAGLLQTYYDLALPMGVNIADEKGN 97
Cdd:PRK08849 5 DIAVVGGGMVGAATALGFAKQGRSVAVIE---GGEPKAFEPSQPMD-------IRVSAISQTSVDLLESLGAWSSIVAMR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 98 ILSTKNVK----PE--NRFDNPEINRNDLRAILLNSL------------ENDTVIWDRKLVMLEPGKKKWTLTFENKPSE 159
Cdd:PRK08849 75 VCPYKRLEtwehPEcrTRFHSDELNLDQLGYIVENRLiqlglwqqfaqyPNLTLMCPEKLADLEFSAEGNRVTLESGAEI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 160 TADLVILANGGMSKIRsfvtdtQVEETGT-----------FNIQADILQPEINCPGFFQlcNGNRL---MAGHQGILLfa 225
Cdd:PRK08849 155 EAKWVIGADGANSQVR------QLAGIGItawdyrqhcmlINVETEQPQQDITWQQFTP--SGPRSflpLCGNQGSLV-- 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 226 npnnngalylgisfktpdeWKNKiPLDFQDRNSVADFLLKrfskwSEVYKQLIRSVSTFQCLPTRKFPLN----NDWKSN 301
Cdd:PRK08849 225 -------------------WYDS-PKRIKQLSAMNPEQLR-----SEILRHFPAELGEIKVLQHGSFPLTrrhaQQYVKN 279
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2231426418 302 RplpITMIGDAAHLMSPFAGQGVNTGLLD-ALILSENLTNGEFTsiENAIENYE 354
Cdd:PRK08849 280 N---CVLLGDAAHTINPLAGQGVNLGFKDvDVLLAETEKQGVLN--DASFARYE 328
|
|
| trkA |
PRK09496 |
Trk system potassium transporter TrkA; |
17-51 |
3.01e-05 |
|
Trk system potassium transporter TrkA;
Pssm-ID: 236541 [Multi-domain] Cd Length: 453 Bit Score: 45.88 E-value: 3.01e-05
10 20 30
....*....|....*....|....*....|....*
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 51
Cdd:PRK09496 232 KRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPER 266
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
1-86 |
7.66e-05 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 44.46 E-value: 7.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 1 MTMRIDTDkqmnllsdknVAIIGGGPVGLTMAKLLQQNGIDVSVYER--DNDREARifGGTldLHKGSgQEAMKKAGLLQ 78
Cdd:PRK06185 1 MAEVETTD----------CCIVGGGPAGMMLGLLLARAGVDVTVLEKhaDFLRDFR--GDT--VHPST-LELMDELGLLE 65
|
....*...
gi 2231426418 79 TYydLALP 86
Cdd:PRK06185 66 RF--LELP 71
|
|
| PRK08013 |
PRK08013 |
oxidoreductase; Provisional |
308-331 |
1.59e-04 |
|
oxidoreductase; Provisional
Pssm-ID: 236139 [Multi-domain] Cd Length: 400 Bit Score: 43.50 E-value: 1.59e-04
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
308-336 |
1.93e-04 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 43.04 E-value: 1.93e-04
10 20
....*....|....*....|....*....
gi 2231426418 308 MIGDAAHLMSPFAGQGVNTGLLDALILSE 336
Cdd:PRK07333 284 LVGDAAHGIHPIAGQGLNLGLKDVAALAE 312
|
|
| PRK08773 |
PRK08773 |
UbiH/UbiF family hydroxylase; |
278-334 |
2.38e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181552 [Multi-domain] Cd Length: 392 Bit Score: 42.93 E-value: 2.38e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2231426418 278 IRSVSTFQCLPTRKfPLNNDWKSNRPLpitMIGDAAHLMSPFAGQGVNTGLLDALIL 334
Cdd:PRK08773 260 VRVASPRTAFPLRR-QLVQQYVSGRVL---TLGDAAHVVHPLAGQGVNLGLRDVAAL 312
|
|
| PRK06617 |
PRK06617 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
18-340 |
2.40e-04 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 168629 [Multi-domain] Cd Length: 374 Bit Score: 42.99 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGG--TLDLHKGSgQEAMKKAGLLQTYYDLALPM-GVNIADE 94
Cdd:PRK06617 3 NTVILGCGLSGMLTALSFAQKGIKTTIFESKSVKSPEFFKDirTTALTPHS-KNFLFSIDIWEELEKFVAEMqDIYVVDN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 95 KGN-ILSTKNvkPENRFDNPEINRNDLRAILLNSLEND---TVIWDRKLVMLEPGKKKWTLTFENKPSEtADLVILANGG 170
Cdd:PRK06617 82 KASeILDLRN--DADAVLGYVVKNSDFKKILLSKITNNpliTLIDNNQYQEVISHNDYSIIKFDDKQIK-CNLLIICDGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 171 MSKIRSFVTDTQVEETG----TFNIQADilQPEINCP-------GFFQLCNgnrLMAGHQGILLFANPNNNGALYLGISF 239
Cdd:PRK06617 159 NSKVRSHYFANEIEKPYqtalTFNIKHE--KPHENCAmehflplGPFALLP---LKDQYASSVIWSTSSDQAALIVNLPV 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 240 KTpdewknkipldfqdrnsvADFLLKRFSKWSEVYKQLIRSVSTFqclPTRKFpLNNDWKSNRplpITMIGDAAHLMSPF 319
Cdd:PRK06617 234 EE------------------VRFLTQRNAGNSLGKITIDSEISSF---PLKAR-IANRYFHNR---IVLIADTAHTVHPL 288
|
330 340
....*....|....*....|.
gi 2231426418 320 AGQGVNTGLLDALILSENLTN 340
Cdd:PRK06617 289 AGQGLNQGIKDIEILSMIVSN 309
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
19-48 |
3.44e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 42.20 E-value: 3.44e-04
10 20 30
....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERD 48
Cdd:COG0665 5 VVVIGGGIAGLSTAYHLARRGLDVTVLERG 34
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
17-57 |
3.52e-04 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 42.11 E-value: 3.52e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYErdndREARIFG 57
Cdd:COG0446 125 KRAVVIGGGPIGLELAEALRKRGLKVTLVE----RAPRLLG 161
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
19-50 |
3.55e-04 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 42.38 E-value: 3.55e-04
10 20 30
....*....|....*....|....*....|..
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 50
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGLSVTLLERGDD 33
|
|
| PRK06834 |
PRK06834 |
hypothetical protein; Provisional |
310-334 |
3.57e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235870 [Multi-domain] Cd Length: 488 Bit Score: 42.31 E-value: 3.57e-04
10 20
....*....|....*....|....*
gi 2231426418 310 GDAAHLMSPFAGQGVNTGLLDALIL 334
Cdd:PRK06834 271 GDAAHVHSPVGGQGLNTGVQDAVNL 295
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
19-46 |
3.77e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 42.19 E-value: 3.77e-04
10 20
....*....|....*....|....*...
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYE 46
Cdd:PRK07538 3 VLIAGGGIGGLTLALTLHQRGIEVVVFE 30
|
|
| ubiF |
PRK08020 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed |
308-333 |
4.25e-04 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Pssm-ID: 181199 [Multi-domain] Cd Length: 391 Bit Score: 42.28 E-value: 4.25e-04
10 20 30
....*....|....*....|....*....|..
gi 2231426418 308 MIGDAAHLMSPFAGQGVNTG------LLDALI 333
Cdd:PRK08020 285 LVGDAAHTINPLAGQGVNLGyrdvdaLLDVLV 316
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
24-357 |
5.28e-04 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 41.49 E-value: 5.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 24 GGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGtldlhkGSGQEAMKKAGLLQTYYDLALP---MGVNIADEKGNILs 100
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGG------GLLPRALEELEPLGLDEPLERPvrgARFYSPGGKSVEL- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 101 tknvkPENRFDNPEINRNDLRAILLNSLEND--TVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKI-RSF 177
Cdd:COG0644 74 -----PPGRGGGYVVDRARFDRWLAEQAEEAgaEVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSLLaRKL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 178 VTDTQVEETGTFN--IQADILQPEINC--PGFFQLCNGNRLMAGHqgilLFANPNNNGALYLGisfktpdewknkIPLDF 253
Cdd:COG0644 149 GLKRRSDEPQDYAlaIKEHWELPPLEGvdPGAVEFFFGEGAPGGY----GWVFPLGDGRVSVG------------IPLGG 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 254 QDRNSVAD-FLLkrfskwsevykqlirsvstfqclptrkfplnndwksnrplpitmIGDAAHLMSPFAGQGVNTGLLDAL 332
Cdd:COG0644 213 PRPRLVGDgVLL--------------------------------------------VGDAAGFVDPLTGEGIHLAMKSGR 248
|
330 340
....*....|....*....|....*....
gi 2231426418 333 ILSEN----LTNGEFTsiENAIENYEQQM 357
Cdd:COG0644 249 LAAEAiaeaLEGGDFS--AEALAEYERRL 275
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
15-58 |
7.30e-04 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 41.37 E-value: 7.30e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERdndreARIFGG 58
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEK-----NDTPGG 40
|
|
| PRK14619 |
PRK14619 |
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional |
17-47 |
8.88e-04 |
|
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Pssm-ID: 237771 [Multi-domain] Cd Length: 308 Bit Score: 40.74 E-value: 8.88e-04
10 20 30
....*....|....*....|....*....|.
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK14619 5 KTIAILGAGAWGSTLAGLASANGHRVRVWSR 35
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
15-46 |
1.01e-03 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 41.25 E-value: 1.01e-03
10 20 30
....*....|....*....|....*....|..
gi 2231426418 15 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE 46
Cdd:PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFD 223
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
16-58 |
1.32e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 40.67 E-value: 1.32e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2231426418 16 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE-RDndreaRIfGG 58
Cdd:COG1231 7 GKDVVIVGAGLAGLAAARELRKAGLDVTVLEaRD-----RV-GG 44
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
308-339 |
1.47e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 40.39 E-value: 1.47e-03
10 20 30
....*....|....*....|....*....|..
gi 2231426418 308 MIGDAAHLMSPFAGQGVNTGLLDALILSENLT 339
Cdd:PRK07364 298 LVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQ 329
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
17-50 |
1.83e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 39.99 E-value: 1.83e-03
10 20 30
....*....|....*....|....*....|....
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 50
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGT 34
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
19-47 |
2.01e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 39.92 E-value: 2.01e-03
10 20
....*....|....*....|....*....
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK09126 6 IVVVGAGPAGLSFARSLAGSGLKVTLIER 34
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
16-49 |
2.14e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 40.14 E-value: 2.14e-03
10 20 30
....*....|....*....|....*....|....
gi 2231426418 16 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 49
Cdd:PRK13984 283 NKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLS 316
|
|
| PRK08244 |
PRK08244 |
monooxygenase; |
306-334 |
2.46e-03 |
|
monooxygenase;
Pssm-ID: 236199 [Multi-domain] Cd Length: 493 Bit Score: 39.73 E-value: 2.46e-03
10 20
....*....|....*....|....*....
gi 2231426418 306 ITMIGDAAHLMSPFAGQGVNTGLLDALIL 334
Cdd:PRK08244 274 IFLAGDAAHIHFPAGGQGLNVGLQDAMNL 302
|
|
| threonine_DH_like |
cd08234 |
L-threonine dehydrogenase; L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent ... |
18-51 |
2.64e-03 |
|
L-threonine dehydrogenase; L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Pssm-ID: 176196 [Multi-domain] Cd Length: 334 Bit Score: 39.43 E-value: 2.64e-03
10 20 30
....*....|....*....|....*....|....*
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGID-VSVYERDNDR 51
Cdd:cd08234 162 SVLVFGAGPIGLLLAQLLKLNGASrVTVAEPNEEK 196
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
16-46 |
2.73e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 39.62 E-value: 2.73e-03
10 20 30
....*....|....*....|....*....|.
gi 2231426418 16 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE 46
Cdd:PRK12831 140 GKKVAVIGSGPAGLTCAGDLAKMGYDVTIFE 170
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
19-50 |
2.88e-03 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 39.36 E-value: 2.88e-03
10 20 30
....*....|....*....|....*....|...
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDND 50
Cdd:COG0579 7 VVIIGAGIVGLALARELSRyEDLKVLVLEKEDD 39
|
|
| Ala_dh_like |
cd01620 |
Alanine dehydrogenase and related dehydrogenases; Alanine dehydrogenase/Transhydrogenase, such ... |
18-77 |
2.94e-03 |
|
Alanine dehydrogenase and related dehydrogenases; Alanine dehydrogenase/Transhydrogenase, such as the hexameric L-alanine dehydrogenase of Phormidium lapideum, contain 2 Rossmann fold-like domains linked by an alpha helical region. Related proteins include Saccharopine Dehydrogenase (SDH), bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme, N(5)-(carboxyethyl)ornithine synthase, and Rubrum transdehydrogenase. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyrucate to L-alanine via reductive amination. Transhydrogenases found in bacterial and inner mitochondrial membranes link NAD(P)(H)-dependent redox reactions to proton translocation. The energy of the proton electrochemical gradient (delta-p), generated by the respiratory electron transport chain, is consumed by transhydrogenase in NAD(P)+ reduction. Transhydrogenase is likely involved in the regulation of the citric acid cycle. Rubrum transhydrogenase has 3 components, dI, dII, and dIII. dII spans the membrane while dI and dIII protrude on the cytoplasmic/matirx side. DI contains 2 domains with Rossmann folds, linked by a long alpha helix, and contains a NAD binding site. Two dI polypeptides (represented in this sub-family) spontaneously form a heterotrimer with one dIII in the absence of dII. In the heterotrimer, both dI chains may bind NAD, but only one is well-ordered. dIII also binds a well-ordered NADP, but in a different orientation than classical Rossmann domains.
Pssm-ID: 240621 [Multi-domain] Cd Length: 317 Bit Score: 39.31 E-value: 2.94e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2231426418 18 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR----EARIFGGTLDLHKGSGQEAMKKAGLL 77
Cdd:cd01620 164 KVLIIGAGVVGLGAAKIAKKLGANVLVYDIKEEKlkgvETLGGSRLRYSQKEELEKELKQTDIL 227
|
|
| PRK05732 |
PRK05732 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
308-342 |
2.97e-03 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 235584 [Multi-domain] Cd Length: 395 Bit Score: 39.45 E-value: 2.97e-03
10 20 30
....*....|....*....|....*....|....*
gi 2231426418 308 MIGDAAHLMSPFAGQGVNTGLLDALILSENLTNGE 342
Cdd:PRK05732 286 LVGNAAQTLHPIAGQGFNLGLRDVMSLAETLTQAL 320
|
|
| TrkA_N |
pfam02254 |
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ... |
19-134 |
3.15e-03 |
|
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Pssm-ID: 426679 [Multi-domain] Cd Length: 115 Bit Score: 37.12 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGiDVSVYERDNDREARIFGGTLDLHKGSG--QEAMKKAGLLQtyYDLALpmgVNIADEKG 96
Cdd:pfam02254 1 IIIIGYGRVGRSLAEELSEGG-DVVVIDKDEERVEELREEGVPVVVGDAtdEEVLEEAGIEE--ADAVI---AATGDDEA 74
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2231426418 97 NILSTKNVKpeNRFDNPEI---NRNDLRAILLNSLENDTVI 134
Cdd:pfam02254 75 NILIVLLAR--ELNPDKKIiarANDPEHAELLRRLGADHVI 113
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
17-47 |
3.83e-03 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 39.47 E-value: 3.83e-03
10 20 30
....*....|....*....|....*....|.
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK12771 138 KRVAVIGGGPAGLSAAYHLRRMGHAVTIFEA 168
|
|
| Kch |
COG1226 |
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism]; |
19-57 |
4.36e-03 |
|
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];
Pssm-ID: 440839 [Multi-domain] Cd Length: 279 Bit Score: 38.56 E-value: 4.36e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2231426418 19 VAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR--EARIFG 57
Cdd:COG1226 127 VIIAGFGRVGQIVARLLRAEGIPFVVIDLDPERveELRRFG 167
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
17-47 |
4.52e-03 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 38.82 E-value: 4.52e-03
10 20 30
....*....|....*....|....*....|.
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 47
Cdd:PRK12770 19 KKVAIIGAGPAGLAAAGYLACLGYEVHVYDK 49
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
12-56 |
4.63e-03 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 39.47 E-value: 4.63e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2231426418 12 NLLSD----KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIF 56
Cdd:PLN02976 685 CVLCDsvdrKKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVY 733
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
310-331 |
5.09e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 38.81 E-value: 5.09e-03
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
17-75 |
5.53e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 38.62 E-value: 5.53e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN------DRE-----ARIFGGTLDLHKGSGQEAMKKAG 75
Cdd:PRK06292 170 KSLAVIGGGVIGLELGQALSRLGVKVTVFERGDrilpleDPEvskqaQKILSKEFKIKLGAKVTSVEKSG 239
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
17-58 |
6.06e-03 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 38.68 E-value: 6.06e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2231426418 17 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERdndreARIFGG 58
Cdd:COG3349 4 PRVVVVGGGLAGLAAAVELAEAGFRVTLLEA-----RPRLGG 40
|
|
| NAD_binding_7 |
pfam13241 |
Putative NAD(P)-binding; This domain is found in fungi, plants, archaea and bacteria. |
14-64 |
7.43e-03 |
|
Putative NAD(P)-binding; This domain is found in fungi, plants, archaea and bacteria.
Pssm-ID: 433055 [Multi-domain] Cd Length: 104 Bit Score: 35.91 E-value: 7.43e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2231426418 14 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARifgGTLDLHK 64
Cdd:pfam13241 5 LRGKRVLVVGGGEVAARKARKLLEAGAKVTVVSPEITPFLE---GLLDLIR 52
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
12-48 |
7.84e-03 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 38.30 E-value: 7.84e-03
10 20 30
....*....|....*....|....*....|....*..
gi 2231426418 12 NLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 48
Cdd:PLN02172 6 NPINSQHVAVIGAGAAGLVAARELRREGHTVVVFERE 42
|
|
|