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Conserved domains on  [gi|2198384020|gb|ULO26035|]
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NADH dehydrogenase subunit 1 [Bunaea alcinoe]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 1.34e-126

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 363.71  E-value: 1.34e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020   6 FYMIFIGVLILIIGILLSMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  86 FNMSMFIWMMIPYYFNMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIM 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 166 DFNFVMFFFYQSEIWLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2198384020 246 IMVYLGGYDMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 1.34e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 363.71  E-value: 1.34e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020   6 FYMIFIGVLILIIGILLSMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  86 FNMSMFIWMMIPYYFNMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIM 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 166 DFNFVMFFFYQSEIWLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2198384020 246 IMVYLGGYDMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
23-303 3.89e-92

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 275.89  E-value: 3.89e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 I--SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIW 180
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 181 LILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM----- 255
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGpfplp 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2198384020 256 -SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLL 303
Cdd:pfam00146 252 gLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 23-311 1.47e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.77  E-value: 1.47e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPY--YF 100
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 101 NMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSE-I 179
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 180 WLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM---- 255
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGpfpi 264

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 256 --------SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:COG1005   265 lplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 1.34e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 363.71  E-value: 1.34e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020   6 FYMIFIGVLILIIGILLSMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  86 FNMSMFIWMMIPYYFNMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIM 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 166 DFNFVMFFFYQSEIWLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2198384020 246 IMVYLGGYDMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 23-307 3.49e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 324.52  E-value: 3.49e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00143   17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00143   97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM-----SL 257
Cdd:MTH00143  177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVlfllgGV 256

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2198384020 258 MFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGV 307
Cdd:MTH00143  257 VFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-309 7.94e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 321.21  E-value: 7.94e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020   8 MIFIGVLILIIGILLSMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFN 87
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  88 MSMFIWMMIPYYFNMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDF 167
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 168 NFVMFFFYQSEIWLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIM 247
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 248 VYLGG--YDMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKI 309
Cdd:MTH00225  242 LFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 25-312 1.29e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 300.29  E-value: 1.29e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  25 AFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNMIS 104
Cdd:MTH00218   20 AFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSLIN 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 105 FNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLILL 184
Cdd:MTH00218  100 LNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLLIP 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 185 MIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDMSLMFYLKLS 264
Cdd:MTH00218  180 EWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINLMLKAT 259

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2198384020 265 LISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYFK 312
Cdd:MTH00218  260 LLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFA 307
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 23-311 2.11e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 289.97  E-value: 2.11e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGY--------- 253
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGAShiptlpelt 261

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2198384020 254 DMSLMfyLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00134  262 TINLM--TKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 23-303 8.34e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 285.48  E-value: 8.34e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00195   18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00195   98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGyDMSLMFYLK 262
Cdd:MTH00195  178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGG-GGTIIVALK 256

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2198384020 263 LSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLL 303
Cdd:MTH00195  257 SLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 25-309 9.97e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 285.64  E-value: 9.97e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  25 AFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNMIS 104
Cdd:MTH00111   23 AFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPLAD 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 105 FNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLILL 184
Cdd:MTH00111  103 LNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLIFS 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 185 MIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGG---------YDM 255
Cdd:MTH00111  183 SWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPstlnlppelFTI 262

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 256 SLMfyLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKI 309
Cdd:MTH00111  263 NLM--TKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 23-311 1.78e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 284.98  E-value: 1.78e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGG---------Y 253
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGStynhlqpelS 260

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2198384020 254 DMSLMfyLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00071  261 TMNLM--IKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPIST 316
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 23-309 1.88e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 282.28  E-value: 1.88e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00104   16 AVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPYPL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00104   96 INMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLI 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDMSLM---- 258
Cdd:MTH00104  176 FPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMpely 255

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 259 ---FYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKI 309
Cdd:MTH00104  256 ttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPI 309
NADHdh pfam00146
NADH dehydrogenase;
23-303 3.89e-92

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 275.89  E-value: 3.89e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 I--SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIW 180
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 181 LILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM----- 255
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGpfplp 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2198384020 256 -SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLL 303
Cdd:pfam00146 252 gLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 23-304 6.57e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 268.38  E-value: 6.57e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00040   20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00040  100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM------- 255
Cdd:MTH00040  180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPfneifpi 259

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2198384020 256 -SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLF 304
Cdd:MTH00040  260 nIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFY 309
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 23-311 1.47e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.77  E-value: 1.47e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPY--YF 100
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 101 NMISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSE-I 179
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 180 WLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM---- 255
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGpfpi 264

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 256 --------SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:COG1005   265 lplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 23-305 9.31e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 265.11  E-value: 9.31e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00010   19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEiWLI 182
Cdd:MTH00010   99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WIL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLG----GYDMSLM 258
Cdd:MTH00010  178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFISDLM 257

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2198384020 259 FYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFM 305
Cdd:MTH00010  258 LILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISI 304
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 23-311 8.28e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 263.13  E-value: 8.28e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00054   18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 I--SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIW 180
Cdd:MTH00054   98 VlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 181 LILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGY------- 253
Cdd:MTH00054  178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWlvisgpt 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2198384020 254 ---DMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00054  258 syfSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 23-311 1.46e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 257.36  E-value: 1.46e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00216   22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 I--SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQS-EI 179
Cdd:MTH00216  102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNnGI 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 180 WLILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDMSLM- 258
Cdd:MTH00216  182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKy 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 259 -------FYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00216  262 fkggagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
25-303 3.22e-81

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 248.57  E-value: 3.22e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  25 AFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPY--YFNM 102
Cdd:PRK06076   28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELVI 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:PRK06076  108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM------- 255
Cdd:PRK06076  188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPpfplggg 267

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2198384020 256 ---SLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLL 303
Cdd:PRK06076  268 ipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 23-311 7.83e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 222.97  E-value: 7.83e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00029   23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGV 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 I--SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSEIW 180
Cdd:MTH00029  103 FlsDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 181 LILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGY------- 253
Cdd:MTH00029  183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWlspldgi 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2198384020 254 ----------------DMSLMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKIYF 311
Cdd:MTH00029  263 ptppeafsifeqiassKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 23-309 1.03e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 184.72  E-value: 1.03e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  23 SMAFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNM 102
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 103 ISFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIfmssLLMIMDFNFVMFFFYQSEIWLI 182
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLY----LLSIMLHNNSFSFVSSFSLSLF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 183 LLMIPlalcWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGgydmslMFYLK 262
Cdd:MTH00090  168 VIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK------FSFLM 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2198384020 263 LSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFMGVKI 309
Cdd:MTH00090  238 LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 25-290 1.67e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.25  E-value: 1.67e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  25 AFLTLLERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNMIS 104
Cdd:MTH00058   19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 105 FNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFyqSEIWLILL 184
Cdd:MTH00058   99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYY--SGWLSVLL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 185 MIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDMSLMFYLKLs 264
Cdd:MTH00058  177 FPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFHL- 255

                         250       260
                  ....*....|....*....|....*.
gi 2198384020 265 lisFLFIWIRGTLPRYRYDKLMYLAW 290
Cdd:MTH00058  256 ---LFFMWARATLPRVRYDYFVNFFW 278
ndhA CHL00032
NADH dehydrogenase subunit 1
 30-303 2.17e-37

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 136.62  E-value: 2.17e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  30 LERKVLGYIQIRKGPNKMGLMGLLQPFSDAIKLISKEQVYLNYSNYFCYYFSPIMSFNMSMFIWMMIPYYFNMI--SFNL 107
Cdd:CHL00032   50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSI 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 108 GVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLM--------IMD----FNFVMFFFY 175
Cdd:CHL00032  130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLsnslstvdIVEaqskYGFWGWNLW 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 176 QSEIWLILLMIplalcwlsSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDM 255
Cdd:CHL00032  210 RQPIGFIVFLI--------SSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNL 281

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2198384020 256 SLMFYLKLSLIS-----------------------FLFIWI--RGTLPRYRYDKLMYLAWMGYLPIALNFLLL 303
Cdd:CHL00032  282 SIPYIFIPELFEinktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNLGWKFLLPISLGNLLL 354
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-305 2.57e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 97.18  E-value: 2.57e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020  26 FLTLLERKVLGYIQIRKGPnkmglmGLLQPFSDAIKLISKEQVYLNYSNYFcYYFSPIMSFNMSMFIWMMIP--YYFNMI 103
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALAAMLLAALLVPvlTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 104 SFNLGVLFFFCVISMGVYTVMISGWASNSNYALLGGLRAVAQTISYEVSLILIFMSSLLMIMDFNFVMFFFYQSE---IW 180
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgpLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2198384020 181 LILLMIPLALCWLSSMMAETNRTPFDFAEGESELVSGFNVEYSSGGFVLIFLAEYLMILLMSLMFIMVYLGGYDMS---- 256
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALtlll 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2198384020 257 --LMFYLKLSLISFLFIWIRGTLPRYRYDKLMYLAWMGYLPIALNFLLLFM 305
Cdd:COG0650   253 alLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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