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Conserved domains on  [gi|1430039916|emb|SSF17593|]
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hemin uptake protein HemP [Klebsiella pneumoniae]

Protein Classification

hemin uptake protein HemP( domain architecture ID 10013451)

hemin uptake protein HemP is involved in the uptake of hemin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 17-75 1.45e-27

hypothetical protein; Provisional


:

Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.12  E-value: 1.45e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1430039916 17 MDNTATAEKPKDNAPYPVatdREISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:PRK10183   1 KLTPETDANHKTASPQPI---RRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
 
Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 17-75 1.45e-27

hypothetical protein; Provisional


Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.12  E-value: 1.45e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1430039916 17 MDNTATAEKPKDNAPYPVatdREISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:PRK10183   1 KLTPETDANHKTASPQPI---RRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
HemP COG4256
Hemin uptake protein HemP [Coenzyme transport and metabolism];
20-75 3.00e-19

Hemin uptake protein HemP [Coenzyme transport and metabolism];


Pssm-ID: 443398  Cd Length: 60  Bit Score: 73.08  E-value: 3.00e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1430039916 20 TATAEKPKDNAPYPVATDREISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:COG4256    5 AATSTPAAAPAAAAAPAPPRIDSRELLGGGREVRIEHNGQRYRLRITRNGKLILTK 60
hemP pfam10636
Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the ...
 40-75 8.46e-15

Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.


Pssm-ID: 431409  Cd Length: 37  Bit Score: 61.34  E-value: 8.46e-15
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 1430039916 40 ISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:pfam10636  2 IDSRELLGGGREVLIEHGGETYRLRITRNGKLILTK 37
 
Name Accession Description Interval E-value
PRK10183 PRK10183
hypothetical protein; Provisional
 17-75 1.45e-27

hypothetical protein; Provisional


Pssm-ID: 182290  Cd Length: 56  Bit Score: 94.12  E-value: 1.45e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1430039916 17 MDNTATAEKPKDNAPYPVatdREISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:PRK10183   1 KLTPETDANHKTASPQPI---RRISSQTLLGPDGKVIIDHDGQEYLLRKTQAGKLLLTK 56
HemP COG4256
Hemin uptake protein HemP [Coenzyme transport and metabolism];
20-75 3.00e-19

Hemin uptake protein HemP [Coenzyme transport and metabolism];


Pssm-ID: 443398  Cd Length: 60  Bit Score: 73.08  E-value: 3.00e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1430039916 20 TATAEKPKDNAPYPVATDREISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:COG4256    5 AATSTPAAAPAAAAAPAPPRIDSRELLGGGREVRIEHNGQRYRLRITRNGKLILTK 60
hemP pfam10636
Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the ...
 40-75 8.46e-15

Hemin uptake protein hemP; This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.


Pssm-ID: 431409  Cd Length: 37  Bit Score: 61.34  E-value: 8.46e-15
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 1430039916 40 ISSRVLLGSEGRVVIEHGGQRYLLRQTHAGKLILTK 75
Cdd:pfam10636  2 IDSRELLGGGREVLIEHGGETYRLRITRNGKLILTK 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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