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Conserved domains on  [gi|1403722873|emb|SQK74555|]
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5-dehydro-2-deoxygluconokinase [Tatumella ptyseos]

Protein Classification

carbohydrate kinase family protein( domain architecture ID 399)

carbohydrate kinase family protein that accepts a wide variety of substrates, including carbohydrates and aromatic small molecules, all being phosphorylated at a hydroxyl group; belongs to the ribokinase/pfkB sugar kinase superfamily

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ribokinase_pfkB_like super family cl00192
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ...
 2-212 3.52e-101

ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).


The actual alignment was detected with superfamily member PRK09434:

Pssm-ID: 469648 [Multi-domain]  Cd Length: 304  Bit Score: 294.92  E-value: 3.52e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGDMNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTS 81
Cdd:PRK09434    4 KVWVLGDAVVDLIPEGENRYLKCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  82 TVVVDLATSGERSFSFLVNPSADQFLTSRDLPVFGK-DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQM 160
Cdd:PRK09434   84 TVVVDLDDQGERSFTFMVRPSADLFLQPQDLPPFRQgEWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDL 163

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1403722873 161 WSDKAEMRRVIEQQCRSADILKLSDEELLWMTeeETSDWEEAL-ALLERYPAR 212
Cdd:PRK09434  164 WQDEAELRECLRQALALADVVKLSEEELCFLS--GTSQLEDAIyALADRYPIA 214
 
Name Accession Description Interval E-value
PRK09434 PRK09434
aminoimidazole riboside kinase; Provisional
 2-212 3.52e-101

aminoimidazole riboside kinase; Provisional


Pssm-ID: 236514 [Multi-domain]  Cd Length: 304  Bit Score: 294.92  E-value: 3.52e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGDMNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTS 81
Cdd:PRK09434    4 KVWVLGDAVVDLIPEGENRYLKCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  82 TVVVDLATSGERSFSFLVNPSADQFLTSRDLPVFGK-DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQM 160
Cdd:PRK09434   84 TVVVDLDDQGERSFTFMVRPSADLFLQPQDLPPFRQgEWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDL 163

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1403722873 161 WSDKAEMRRVIEQQCRSADILKLSDEELLWMTeeETSDWEEAL-ALLERYPAR 212
Cdd:PRK09434  164 WQDEAELRECLRQALALADVVKLSEEELCFLS--GTSQLEDAIyALADRYPIA 214
bac_FRK cd01167
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ...
 2-212 4.01e-68

Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.


Pssm-ID: 238572 [Multi-domain]  Cd Length: 295  Bit Score: 210.57  E-value: 4.01e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGD---MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETY 78
Cdd:cd01167     1 KVVCFGEALIDFIPEGSgapETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  79 RTSTVVVDLATSGERSFSFLVNPSADQFLTSRDLPVFGK--DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNL 156
Cdd:cd01167    81 PTTLAFVTLDADGERSFEFYRGPAADLLLDTELNPDLLSeaDILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNL 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1403722873 157 REQMWSDKAEMRRVIEQQCRSADILKLSDEELLWMTEEEtsDWEEALALLERYPAR 212
Cdd:cd01167   161 RPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEE--DPEEIAALLLLFGLK 214
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
 2-212 2.85e-51

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 167.37  E-value: 2.85e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDL------LPAGDM-----NYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAE 70
Cdd:COG0524     1 DVLVIGEALVDLvarvdrLPKGGEtvlagSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  71 FMLTDETYRTSTVVVDLATSGERSFSFlvNPSADQFLTSRDLP---VFGKDILHYCSLALAAENCREAVVQATSKVKARE 147
Cdd:COG0524    81 GVRRDPGAPTGLAFILVDPDGERTIVF--YRGANAELTPEDLDealLAGADILHLGGITLASEPPREALLAALEAARAAG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1403722873 148 GWVSFDLNLREQMWsdkAEMRRVIEQQCRSADILKLSDEELLWMTEEEtsDWEEALA-LLERYPAR 212
Cdd:COG0524   159 VPVSLDPNYRPALW---EPARELLRELLALVDILFPNEEEAELLTGET--DPEEAAAaLLARGVKL 219
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
 2-207 1.35e-33

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 121.68  E-value: 1.35e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGD---------MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFM 72
Cdd:pfam00294   1 KVVVIGEANIDLIGNVEglpgelvrvSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTDYV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  73 LTDETYRTSTVVVDLATSGERSFSFLVNPSADQFLT--SRDLPVFGK-DILHYCSLALAaeNCREAVVQATSKVKAREGw 149
Cdd:pfam00294  81 VIDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEelEENEDLLENaDLLYISGSLPL--GLPEATLEELIEAAKNGG- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1403722873 150 vSFDLNLREQMWSDKAEMRRVIEQqcrsADILKLSDEELLWMTEEETSDWEEALALLE 207
Cdd:pfam00294 158 -TFDPNLLDPLGAAREALLELLPL----ADLLKPNEEELEALTGAKLDDIEEALAALH 210
1-PFK TIGR03168
hexose kinase, 1-phosphofructokinase family; This family consists largely of ...
 22-88 9.55e-04

hexose kinase, 1-phosphofructokinase family; This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.


Pssm-ID: 274464 [Multi-domain]  Cd Length: 303  Bit Score: 39.10  E-value: 9.55e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1403722873  22 QACAGGAPLNVAVGVARLAGDSAFIGRVGNDPfGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLA 88
Cdd:TIGR03168  31 RKDAGGKGINVARVLARLGAEVVATGFLGGFT-GEFIEALLAEEGIKNDFVEVKGETRINVKIKESS 96
 
Name Accession Description Interval E-value
PRK09434 PRK09434
aminoimidazole riboside kinase; Provisional
 2-212 3.52e-101

aminoimidazole riboside kinase; Provisional


Pssm-ID: 236514 [Multi-domain]  Cd Length: 304  Bit Score: 294.92  E-value: 3.52e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGDMNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTS 81
Cdd:PRK09434    4 KVWVLGDAVVDLIPEGENRYLKCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  82 TVVVDLATSGERSFSFLVNPSADQFLTSRDLPVFGK-DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQM 160
Cdd:PRK09434   84 TVVVDLDDQGERSFTFMVRPSADLFLQPQDLPPFRQgEWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDL 163

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1403722873 161 WSDKAEMRRVIEQQCRSADILKLSDEELLWMTeeETSDWEEAL-ALLERYPAR 212
Cdd:PRK09434  164 WQDEAELRECLRQALALADVVKLSEEELCFLS--GTSQLEDAIyALADRYPIA 214
bac_FRK cd01167
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ...
 2-212 4.01e-68

Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.


Pssm-ID: 238572 [Multi-domain]  Cd Length: 295  Bit Score: 210.57  E-value: 4.01e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGD---MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETY 78
Cdd:cd01167     1 KVVCFGEALIDFIPEGSgapETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  79 RTSTVVVDLATSGERSFSFLVNPSADQFLTSRDLPVFGK--DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNL 156
Cdd:cd01167    81 PTTLAFVTLDADGERSFEFYRGPAADLLLDTELNPDLLSeaDILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNL 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1403722873 157 REQMWSDKAEMRRVIEQQCRSADILKLSDEELLWMTEEEtsDWEEALALLERYPAR 212
Cdd:cd01167   161 RPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEE--DPEEIAALLLLFGLK 214
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
 2-212 2.85e-51

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 167.37  E-value: 2.85e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDL------LPAGDM-----NYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAE 70
Cdd:COG0524     1 DVLVIGEALVDLvarvdrLPKGGEtvlagSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  71 FMLTDETYRTSTVVVDLATSGERSFSFlvNPSADQFLTSRDLP---VFGKDILHYCSLALAAENCREAVVQATSKVKARE 147
Cdd:COG0524    81 GVRRDPGAPTGLAFILVDPDGERTIVF--YRGANAELTPEDLDealLAGADILHLGGITLASEPPREALLAALEAARAAG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1403722873 148 GWVSFDLNLREQMWsdkAEMRRVIEQQCRSADILKLSDEELLWMTEEEtsDWEEALA-LLERYPAR 212
Cdd:COG0524   159 VPVSLDPNYRPALW---EPARELLRELLALVDILFPNEEEAELLTGET--DPEEAAAaLLARGVKL 219
PLN02323 PLN02323
probable fructokinase
 26-205 2.65e-43

probable fructokinase


Pssm-ID: 215183 [Multi-domain]  Cd Length: 330  Bit Score: 147.85  E-value: 2.65e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLATSGERSFSFLVNPSADQ 105
Cdd:PLN02323   43 GGAPANVAVGISRLGGSSAFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 106 FLTSRDLP---VFGKDILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQMWSDKAEMRRVIEQQCRSADILK 182
Cdd:PLN02323  123 LLRESELDldlIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIK 202

                         170       180
                  ....*....|....*....|...
gi 1403722873 183 LSDEELLWMTEEETSDWEEALAL 205
Cdd:PLN02323  203 VSDEEVEFLTGGDDPDDDTVVKL 225
KdgK cd01166
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form ...
 2-211 3.68e-41

2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.


Pssm-ID: 238571 [Multi-domain]  Cd Length: 294  Bit Score: 141.17  E-value: 3.68e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGD------MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTD 75
Cdd:cd01166     1 DVVTIGEVMVDLSPPGGgrleqaDSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRVD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  76 ETYRTSTVVVDLATSGERSFSFLVNPSADQFLTSRDLPVF---GKDILHYCSLALAA-ENCREAVVQATSKVKAREGWVS 151
Cdd:cd01166    81 PGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAalaGADHLHLSGITLALsESAREALLEALEAAKARGVTVS 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1403722873 152 FDLNLREQMWSdKAEMRRVIEQQCRSADILKLSDEE--LLWMTEEETSDWEEALALLERYPA 211
Cdd:cd01166   161 FDLNYRPKLWS-AEEAREALEELLPYVDIVLPSEEEaeALLGDEDPTDAAERALALALGVKA 221
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
 2-207 1.35e-33

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 121.68  E-value: 1.35e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGD---------MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFM 72
Cdd:pfam00294   1 KVVVIGEANIDLIGNVEglpgelvrvSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTDYV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  73 LTDETYRTSTVVVDLATSGERSFSFLVNPSADQFLT--SRDLPVFGK-DILHYCSLALAaeNCREAVVQATSKVKAREGw 149
Cdd:pfam00294  81 VIDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEelEENEDLLENaDLLYISGSLPL--GLPEATLEELIEAAKNGG- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1403722873 150 vSFDLNLREQMWSDKAEMRRVIEQqcrsADILKLSDEELLWMTEEETSDWEEALALLE 207
Cdd:pfam00294 158 -TFDPNLLDPLGAAREALLELLPL----ADLLKPNEEELEALTGAKLDDIEEALAALH 210
PLN02543 PLN02543
pfkB-type carbohydrate kinase family protein
 26-195 8.16e-19

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215299  Cd Length: 496  Bit Score: 83.80  E-value: 8.16e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTST--VVVDLATSGERSFSFLVNPSA 103
Cdd:PLN02543  172 GGPPSNVAISHVRLGGRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACsrMKIKFRDGGKMVAETVKEAAE 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 104 DQFLTSR-DLPVFGK-DILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQMWSDKAEMRRVIEQQCRSADIL 181
Cdd:PLN02543  252 DSLLASElNLAVLKEaRMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADII 331

                         170
                  ....*....|....
gi 1403722873 182 KLSDEELLWMTEEE 195
Cdd:PLN02543  332 EVSRQELEFLLDED 345
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
 2-119 6.39e-15

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 71.43  E-value: 6.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDL------LP------AGDmNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGA 69
Cdd:cd01174     1 KVVVVGSINVDLvtrvdrLPkpgetvLGS-SFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDV 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1403722873  70 EFMLTDETYRTSTVVVDLATSGERsfSFLVNPSADQFLTSRDLPVFGKDI 119
Cdd:cd01174    80 SYVEVVVGAPTGTAVITVDESGEN--RIVVVPGANGELTPADVDAALELI 127
ribokinase_group_A cd01942
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ...
 26-209 8.45e-14

Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238917 [Multi-domain]  Cd Length: 279  Bit Score: 68.11  E-value: 8.45e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVdlATSGERSFSFLVNPSADQ 105
Cdd:cd01942    36 GGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFI--LTDGDDNQIAYFYPGAMD 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 106 FLT-SRDLPVFGK-DILHycslaLAAEncrEAVVQATSKVKAREGWVSFDLNlreQMWS--DKAEMRRVIEQqcrsADIL 181
Cdd:cd01942   114 ELEpNDEADPDGLaDIVH-----LSSG---PGLIELARELAAGGITVSFDPG---QELPrlSGEELEEILER----ADIL 178

                         170       180
                  ....*....|....*....|....*...
gi 1403722873 182 KLSDEELLwMTEEETSDWEEALALLERY 209
Cdd:cd01942   179 FVNDYEAE-LLKERTGLSEAELASGVRV 205
Fructoselysine_kinase_like cd01940
Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a ...
 2-172 1.56e-12

Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.


Pssm-ID: 238915 [Multi-domain]  Cd Length: 264  Bit Score: 64.68  E-value: 1.56e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDLLPAGDMNYqacAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMltdETYRTS 81
Cdd:cd01940     1 RLAAIGDNVVDKYLHLGKMY---PGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHC---RVKEGE 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  82 TVVVDLATS-GERSFSFL-VNPSADQFLTSRDLPVFGK-DILH---YCSLALAAENCREAVVQATSkvkaregwVSFDLN 155
Cdd:cd01940    75 NAVADVELVdGDRIFGLSnKGGVAREHPFEADLEYLSQfDLVHtgiYSHEGHLEKALQALVGAGAL--------ISFDFS 146

                         170
                  ....*....|....*..
gi 1403722873 156 LReqmWSDKaEMRRVIE 172
Cdd:cd01940   147 DR---WDDD-YLQLVCP 159
adenosine_kinase cd01168
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside ...
 1-210 1.66e-12

Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.


Pssm-ID: 238573 [Multi-domain]  Cd Length: 312  Bit Score: 64.94  E-value: 1.66e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   1 MKIWALGDAVVDL-------------LPAGDM---------------NYQACAGGAPLNVAVGVARLAGDSAFIGRVGND 52
Cdd:cd01168     2 YDVLGLGNALVDIlaqvddafleklgLKKGDMiladmeeqeellaklPVKYIAGGSAANTIRGAAALGGSAAFIGRVGDD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  53 PFGRFLKRTLEEQGVGAEFMlTDETYRTSTVVVDLATSGERSFSFLVNPSADqfltsrdlpvFGKDILHYCSLALAA--- 129
Cdd:cd01168    82 KLGDFLLKDLRAAGVDTRYQ-VQPDGPTGTCAVLVTPDAERTMCTYLGAANE----------LSPDDLDWSLLAKAKyly 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 130 ------ENCREAVVQATskVKAREGWVSFDLNLreqmwSD-------KAEMRRVIEQqcrsADILKLSDEELLWMTE-EE 195
Cdd:cd01168   151 legyllTVPPEAILLAA--EHAKENGVKIALNL-----SApfivqrfKEALLELLPY----VDILFGNEEEAEALAEaET 219

                         250
                  ....*....|....*
gi 1403722873 196 TSDWEEALALLERYP 210
Cdd:cd01168   220 TDDLEAALKLLALRC 234
PLN02967 PLN02967
kinase
 26-188 2.42e-12

kinase


Pssm-ID: 215521 [Multi-domain]  Cd Length: 581  Bit Score: 65.07  E-value: 2.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLATSGERSFSFLVNPSADQ 105
Cdd:PLN02967  243 GGSAGGVAIALASLGGKVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDS 322

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 106 FLTSRDLPVFGKD--ILHYCSLALAAENCREAVVQATSKVKAREGWVSFDLNLREQMWSDKAEMRRVIEQQCRSADILKL 183
Cdd:PLN02967  323 LSKSEINIDVLKEakMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEV 402


                  ....*
gi 1403722873 184 SDEEL 188
Cdd:PLN02967  403 TKQEL 407
PRK09813 PRK09813
fructoselysine 6-kinase; Provisional
 1-95 4.09e-10

fructoselysine 6-kinase; Provisional


Pssm-ID: 182090 [Multi-domain]  Cd Length: 260  Bit Score: 57.83  E-value: 4.09e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   1 MKIWALGDAVVDLLPAGDMNYqacAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETyRT 80
Cdd:PRK09813    1 KKLATIGDNCVDIYPQLGKAF---SGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHG-VT 76

                          90
                  ....*....|....*
gi 1403722873  81 STVVVDLaTSGERSF 95
Cdd:PRK09813   77 AQTQVEL-HDNDRVF 90
ribokinase_group_B cd01945
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ...
 9-146 1.66e-09

Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .


Pssm-ID: 238920 [Multi-domain]  Cd Length: 284  Bit Score: 56.15  E-value: 1.66e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   9 AVVDLLPAGD-----MNYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTV 83
Cdd:cd01945    14 YLVASFPGGDgkivaTDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPIS 93

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1403722873  84 VVDLATSGERSFSFlvNPSADQFltsrDLPVFGKDILHYCSLALAAENCREAVVQATSKVKAR 146
Cdd:cd01945    94 SITDITGDRATISI--TAIDTQA----APDSLPDAILGGADAVLVDGRQPEAALHLAQEARAR 150
RfaE COG2870
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane ...
 25-82 5.80e-09

ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442117 [Multi-domain]  Cd Length: 321  Bit Score: 54.82  E-value: 5.80e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1403722873  25 AGGApLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTST 82
Cdd:COG2870    55 PGGA-ANVAANLAALGAQVTLVGVVGDDEAGRELRRLLEEAGIDTDGLVVDPRRPTTT 111
IolC COG3892
Myo-inositol catabolism protein LolC [Carbohydrate transport and metabolism];
26-86 2.06e-07

Myo-inositol catabolism protein LolC [Carbohydrate transport and metabolism];


Pssm-ID: 443099 [Multi-domain]  Cd Length: 640  Bit Score: 50.66  E-value: 2.06e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVgaefmltdetyRTSTVVVD 86
Cdd:COG3892    38 GGSSGNIAYGTARLGLKSAMLTRVGDEHMGRFLREELEREGV-----------DTSGVVTD 87
PTZ00292 PTZ00292
ribokinase; Provisional
 26-127 2.82e-07

ribokinase; Provisional


Pssm-ID: 185541 [Multi-domain]  Cd Length: 326  Bit Score: 49.74  E-value: 2.82e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRT--STVVVDLATSGErsfSFLVNPSA 103
Cdd:PTZ00292   52 GGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTglAMIFVDTKTGNN---EIVIIPGA 128

                          90       100
                  ....*....|....*....|....
gi 1403722873 104 DQFLTSRDLPVFGKDILHYCSLAL 127
Cdd:PTZ00292  129 NNALTPQMVDAQTDNIQNICKYLI 152
PLN02548 PLN02548
adenosine kinase
 16-94 5.43e-07

adenosine kinase


Pssm-ID: 178163 [Multi-domain]  Cd Length: 332  Bit Score: 48.94  E-value: 5.43e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  16 AGDMNYQACAGGAPLN---VAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMlTDETYRTSTVVVdLATSGE 92
Cdd:PLN02548   42 ASKYNVEYIAGGATQNsirVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYY-EDESTPTGTCAV-LVVGGE 119


                  ..
gi 1403722873  93 RS 94
Cdd:PLN02548  120 RS 121
RfaE_like cd01172
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ...
 25-82 1.29e-06

RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.


Pssm-ID: 238577 [Multi-domain]  Cd Length: 304  Bit Score: 47.94  E-value: 1.29e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1403722873  25 AGGApLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFmLTDETYRTST 82
Cdd:cd01172    39 LGGA-ANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEGIDTDG-IVDEGRPTTT 94
PRK11142 PRK11142
ribokinase; Provisional
 20-94 1.80e-05

ribokinase; Provisional


Pssm-ID: 236858 [Multi-domain]  Cd Length: 306  Bit Score: 44.48  E-value: 1.80e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1403722873  20 NYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLATSGERS 94
Cdd:PRK11142   33 HYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENS 107
PRK11316 PRK11316
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose ...
 25-71 2.14e-05

bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;


Pssm-ID: 183085 [Multi-domain]  Cd Length: 473  Bit Score: 44.43  E-value: 2.14e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1403722873  25 AGGAPlNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEF 71
Cdd:PRK11316   50 PGGAA-NVAMNIASLGAQARLVGLTGIDEAARALSKLLAAVGVKCDF 95
PLN02813 PLN02813
pfkB-type carbohydrate kinase family protein
 20-187 9.41e-05

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215434 [Multi-domain]  Cd Length: 426  Bit Score: 42.49  E-value: 9.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  20 NYQACAGGAPLNVAVGVARLAGDS--------AFIGRVGNDPFGRFLKRTLEEQGVgaEFM---LTDETyrTSTVVVDLA 88
Cdd:PLN02813  120 SYKASAGGSLSNTLVALARLGSQSaagpalnvAMAGSVGSDPLGDFYRTKLRRANV--HFLsqpVKDGT--TGTVIVLTT 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  89 TSGERSF------SFLVNPS---ADQFLTSRDLPVFGK--DILHycSLALAAENCREAvVQATSKVKAREGWVSFDLNLR 157
Cdd:PLN02813  196 PDAQRTMlsyqgtSSTVNYDsclASAISKSRVLVVEGYlwELPQ--TIEAIAQACEEA-HRAGALVAVTASDVSCIERHR 272

                         170       180       190
                  ....*....|....*....|....*....|
gi 1403722873 158 EQMWsdkaemrRVIeqqCRSADILKLSDEE 187
Cdd:PLN02813  273 DDFW-------DVM---GNYADILFANSDE 292
FruK COG1105
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
25-92 1.73e-04

1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];


Pssm-ID: 440722 [Multi-domain]  Cd Length: 304  Bit Score: 41.27  E-value: 1.73e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1403722873  25 AGGAPLNVAVGVARLAGDS---AFIGRvgndPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLATSGE 92
Cdd:COG1105    34 PGGKGINVARVLKALGVDVtalGFLGG----FTGEFIEELLDEEGIPTDFVPIEGETRINIKIVDPSDGTE 100
PTZ00247 PTZ00247
adenosine kinase; Provisional
 25-94 5.37e-04

adenosine kinase; Provisional


Pssm-ID: 240328 [Multi-domain]  Cd Length: 345  Bit Score: 40.01  E-value: 5.37e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1403722873  25 AGGAPLNVAvgvaRLA--------GDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDEtYRTSTVVVdLATSGERS 94
Cdd:PTZ00247   61 PGGSALNTA----RVAqwmlqapkGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTK-APTGTCAV-LVCGKERS 132
PLN02341 PLN02341
pfkB-type carbohydrate kinase family protein
 25-188 6.77e-04

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215195 [Multi-domain]  Cd Length: 470  Bit Score: 39.81  E-value: 6.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  25 AGGApLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDetyrTSTVVVDLATSGERSFSFLVNPSAD 104
Cdd:PLN02341  119 AGGN-CNFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEG----TDAGDSSSASYETLLCWVLVDPLQR 193

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873 105 QFLTSR-------------DLPVFGKDILHYCSLALAA-----ENCREAVVQATSKVKAREGWVSFDLNLREQMWSD-KA 165
Cdd:PLN02341  194 HGFCSRadfgpepafswisKLSAEAKMAIRQSKALFCNgyvfdELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVgTP 273

                         170       180
                  ....*....|....*....|...
gi 1403722873 166 EMRRVIEQQCRSADILKLSDEEL 188
Cdd:PLN02341  274 DERRALEHLLRMSDVLLLTSEEA 296
Guanosine_kinase_like cd01947
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like ...
 26-96 7.22e-04

Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238922 [Multi-domain]  Cd Length: 265  Bit Score: 39.32  E-value: 7.22e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1403722873  26 GGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDlaTSGERSFS 96
Cdd:cd01947    36 GGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGGDKHTVAWRDKPTRKTLSFID--PNGERTIT 104
1-PFK TIGR03168
hexose kinase, 1-phosphofructokinase family; This family consists largely of ...
 22-88 9.55e-04

hexose kinase, 1-phosphofructokinase family; This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.


Pssm-ID: 274464 [Multi-domain]  Cd Length: 303  Bit Score: 39.10  E-value: 9.55e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1403722873  22 QACAGGAPLNVAVGVARLAGDSAFIGRVGNDPfGRFLKRTLEEQGVGAEFMLTDETYRTSTVVVDLA 88
Cdd:TIGR03168  31 RKDAGGKGINVARVLARLGAEVVATGFLGGFT-GEFIEALLAEEGIKNDFVEVKGETRINVKIKESS 96
YegV_kinase_like cd01944
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase ...
 2-212 1.62e-03

YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238919 [Multi-domain]  Cd Length: 289  Bit Score: 38.56  E-value: 1.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873   2 KIWALGDAVVDL------LPA--GDM--NYQACAGGAPLNVAVGVARLAGDSAFIGRVGNDPFGRFLKRTLEEQGVgaEF 71
Cdd:cd01944     1 KVLVIGAAVVDIvldvdkLPAsgGDIeaKSKSYVIGGGFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGI--EI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403722873  72 MLTDETYRTSTVVVDLAT-SGERsfSFLVNPSADQFLTSRD---LPVFGKDILHYCSLALAAENC-REAVVQATSKVKAR 146
Cdd:cd01944    79 LLPPRGGDDGGCLVALVEpDGER--SFISISGAEQDWSTEWfatLTVAPYDYVYLSGYTLASENAsKVILLEWLEALPAG 156

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1403722873 147 EGWVsFDLNLREQMWSDkAEMRRVIeqQCRSadILKLSDEELLWMTEEETSdweEALALLERYPAR 212
Cdd:cd01944   157 TTLV-FDPGPRISDIPD-TILQALM--AKRP--IWSCNREEAAIFAERGDP---AAEASALRIYAK 213
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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