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Conserved domains on  [gi|1403602086|emb|SQI29741|]
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nad(p) transhydrogenase beta subunit pntb [Rhodococcus coprophilus]

Protein Classification

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta( domain architecture ID 10003429)

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta is part of a tetrameric membrane-bound proton pump (composed of two alpha and two beta subunits) that catalyzes the reversible transfer of a hydride ion equivalent between NAD and NADP

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-473 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


:

Pssm-ID: 440893  Cd Length: 458  Bit Score: 629.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   1 MSYLVSILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVATLIDIrDTGNWIIIVAGLVVGVVLGVPPALRTKM 80
Cdd:COG1282     2 SNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLP-GIVNYGLILAAIAIGGAIGAVLARKVEM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  81 TAMPQLVAMFNGVGGGTVALIAWAEFLDTDGFTqiDGEPTVHIVIGSLfAAIIGSISFWGSIVAYVKLQELLNknvEKKL 160
Cdd:COG1282    81 TAMPQLVALFNGFGGLAAALVAAAELLEPGALA--GALPAIHLIEIVL-GVLIGAVTFTGSLIAFGKLQGLIS---GKPI 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 161 VGGAKlfQIANVLLAVASLAIAVYIginadpANDPTAGIWILALLVVAGLMGLFVVLPIGGADMPVVISLLNALTGLSAA 240
Cdd:COG1282   155 TFPGQ--HLLNLLLLLAIVALGVLF------VVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAA 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 241 AAGLALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGvTDATGGTVKSTSSSDAAIQMAYANQV 320
Cdd:COG1282   227 AAGFVLGNDLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAA-GAAEQGEVKEISAEDAAILLAYASSV 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 321 IVVPGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTDVTIVIG 400
Cdd:COG1282   306 IIVPGYGMAVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIG 385

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1403602086 401 ANDVTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVTEEL 473
Cdd:COG1282   386 ANDVVNPAARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-473 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 629.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   1 MSYLVSILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVATLIDIrDTGNWIIIVAGLVVGVVLGVPPALRTKM 80
Cdd:COG1282     2 SNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLP-GIVNYGLILAAIAIGGAIGAVLARKVEM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  81 TAMPQLVAMFNGVGGGTVALIAWAEFLDTDGFTqiDGEPTVHIVIGSLfAAIIGSISFWGSIVAYVKLQELLNknvEKKL 160
Cdd:COG1282    81 TAMPQLVALFNGFGGLAAALVAAAELLEPGALA--GALPAIHLIEIVL-GVLIGAVTFTGSLIAFGKLQGLIS---GKPI 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 161 VGGAKlfQIANVLLAVASLAIAVYIginadpANDPTAGIWILALLVVAGLMGLFVVLPIGGADMPVVISLLNALTGLSAA 240
Cdd:COG1282   155 TFPGQ--HLLNLLLLLAIVALGVLF------VVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAA 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 241 AAGLALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGvTDATGGTVKSTSSSDAAIQMAYANQV 320
Cdd:COG1282   227 AAGFVLGNDLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAA-GAAEQGEVKEISAEDAAILLAYASSV 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 321 IVVPGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTDVTIVIG 400
Cdd:COG1282   306 IIVPGYGMAVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIG 385

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1403602086 401 ANDVTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVTEEL 473
Cdd:COG1282   386 ANDVVNPAARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 7-472 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 589.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   7 ILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVAT--LIDIRDTGNWIIIVAGLVVGVVLGVPPALRTKMTAMP 84
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATllLGALADSLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  85 QLVAMFNGVGGGTVALIAWAEFLDTDGFTqiDGEPTVHIVIgSLFAAIIGSISFWGSIVAYVKLQELLNKnveKKLVggA 164
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFG--AGISAFHLVE-IVLGVLIGAVTFTGSLIAFGKLQGLLSS---KPLT--L 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 165 KLFQIANVLLAVASLAIAVYIGINADPandptagIWILALLVVAGLMGLFVVLPIGGADMPVVISLLNALTGLSAAAAGL 244
Cdd:pfam02233 153 PGRHLLNLLLLLAIVVLGVLFVAAPSS-------PGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGF 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 245 ALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGVTDAT-GGTVKSTSSSDAAIQMAYANQVIVV 323
Cdd:pfam02233 226 VLGNPLLIIAGALVGASGAILTYIMCKAMNRSLTNVLFGGFGAAASAGAAGAAAaDGEVKEISAEDAAELLAYASSVIIV 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 324 PGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTDVTIVIGAND 403
Cdd:pfam02233 306 PGYGMAVAQAQHAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGAND 385

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1403602086 404 VTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVTEE 472
Cdd:pfam02233 386 VVNPAARTDPGSPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
1-476 1.02e-123

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 368.66  E-value: 1.02e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   1 MSY-LVSILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVATLIDIRDTG-NWIIIVAGLVVGVVLGVppALRT 78
Cdd:PRK09444    1 MSGgLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNvGWIIIAMVIGGAIGIRL--AKKV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  79 KMTAMPQLVAMFNGVGGGTVALIAWAEFLDTDGFTQiDGEPTVHIVigSLFAAI-IGSISFWGSIVAYVKLQELLNkNVE 157
Cdd:PRK09444   79 EMTEMPELVAILHSFVGLAAVLVGFNSYLDHDAGMA-PVLVNIHLT--EVFLGIfIGAVTFTGSIVAFGKLRGKIS-SKP 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 158 KKLVGGAKLfqiaNVLLAVASLAIAVYIginadpANDPTAGIWILALLV---VAGLMGLFVVLPIGGADMPVVISLLNAL 234
Cdd:PRK09444  155 LMLPHRHKL----NLAALVVSFLLLIVF------VRTDSVGLQVFALLLmtlIALAFGWHLVASIGGADMPVVVSMLNSY 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 235 TGLSAAAAGLALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGvTDATGGTVKSTSSSDAAIQM 314
Cdd:PRK09444  225 SGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTG-DDEEVGEHRETTAEEVAEML 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 315 AYANQVIVVPGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTD 394
Cdd:PRK09444  304 KNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTD 383

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 395 VTIVIGANDVTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVteeLK 474
Cdd:PRK09444  384 TVLVIGANDTVNPAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAI---LK 460


                  ..
gi 1403602086 475 AL 476
Cdd:PRK09444  461 AL 462
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
1-473 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 629.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   1 MSYLVSILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVATLIDIrDTGNWIIIVAGLVVGVVLGVPPALRTKM 80
Cdd:COG1282     2 SNTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLP-GIVNYGLILAAIAIGGAIGAVLARKVEM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  81 TAMPQLVAMFNGVGGGTVALIAWAEFLDTDGFTqiDGEPTVHIVIGSLfAAIIGSISFWGSIVAYVKLQELLNknvEKKL 160
Cdd:COG1282    81 TAMPQLVALFNGFGGLAAALVAAAELLEPGALA--GALPAIHLIEIVL-GVLIGAVTFTGSLIAFGKLQGLIS---GKPI 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 161 VGGAKlfQIANVLLAVASLAIAVYIginadpANDPTAGIWILALLVVAGLMGLFVVLPIGGADMPVVISLLNALTGLSAA 240
Cdd:COG1282   155 TFPGQ--HLLNLLLLLAIVALGVLF------VVSPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAA 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 241 AAGLALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGvTDATGGTVKSTSSSDAAIQMAYANQV 320
Cdd:COG1282   227 AAGFVLGNDLLIIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAA-GAAEQGEVKEISAEDAAILLAYASSV 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 321 IVVPGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTDVTIVIG 400
Cdd:COG1282   306 IIVPGYGMAVAQAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIG 385

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1403602086 401 ANDVTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVTEEL 473
Cdd:COG1282   386 ANDVVNPAARTDPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 7-472 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 589.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   7 ILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVAT--LIDIRDTGNWIIIVAGLVVGVVLGVPPALRTKMTAMP 84
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATllLGALADSLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  85 QLVAMFNGVGGGTVALIAWAEFLDTDGFTqiDGEPTVHIVIgSLFAAIIGSISFWGSIVAYVKLQELLNKnveKKLVggA 164
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFG--AGISAFHLVE-IVLGVLIGAVTFTGSLIAFGKLQGLLSS---KPLT--L 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 165 KLFQIANVLLAVASLAIAVYIGINADPandptagIWILALLVVAGLMGLFVVLPIGGADMPVVISLLNALTGLSAAAAGL 244
Cdd:pfam02233 153 PGRHLLNLLLLLAIVVLGVLFVAAPSS-------PGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGF 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 245 ALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGVTDAT-GGTVKSTSSSDAAIQMAYANQVIVV 323
Cdd:pfam02233 226 VLGNPLLIIAGALVGASGAILTYIMCKAMNRSLTNVLFGGFGAAASAGAAGAAAaDGEVKEISAEDAAELLAYASSVIIV 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 324 PGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTDVTIVIGAND 403
Cdd:pfam02233 306 PGYGMAVAQAQHAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGAND 385

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1403602086 404 VTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVTEE 472
Cdd:pfam02233 386 VVNPAARTDPGSPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
1-476 1.02e-123

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 368.66  E-value: 1.02e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086   1 MSY-LVSILYIVAFGMFIYGLMGLTGPKTAVRGNYIAAVGMLLAVVATLIDIRDTG-NWIIIVAGLVVGVVLGVppALRT 78
Cdd:PRK09444    1 MSGgLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNvGWIIIAMVIGGAIGIRL--AKKV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086  79 KMTAMPQLVAMFNGVGGGTVALIAWAEFLDTDGFTQiDGEPTVHIVigSLFAAI-IGSISFWGSIVAYVKLQELLNkNVE 157
Cdd:PRK09444   79 EMTEMPELVAILHSFVGLAAVLVGFNSYLDHDAGMA-PVLVNIHLT--EVFLGIfIGAVTFTGSIVAFGKLRGKIS-SKP 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 158 KKLVGGAKLfqiaNVLLAVASLAIAVYIginadpANDPTAGIWILALLV---VAGLMGLFVVLPIGGADMPVVISLLNAL 234
Cdd:PRK09444  155 LMLPHRHKL----NLAALVVSFLLLIVF------VRTDSVGLQVFALLLmtlIALAFGWHLVASIGGADMPVVVSMLNSY 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 235 TGLSAAAAGLALNNTAMIVAGMIVGASGTILTNLMAKAMNRSIPAIVFGSFGGDGGVAGvTDATGGTVKSTSSSDAAIQM 314
Cdd:PRK09444  225 SGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTG-DDEEVGEHRETTAEEVAEML 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 315 AYANQVIVVPGYGLAVAQAQHAVKEMASLLEQRGVEVKYAIHPVAGRMPGHMNVLLAEAEVSYDALKEMDDINGEFNRTD 394
Cdd:PRK09444  304 KNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTD 383

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1403602086 395 VTIVIGANDVTNPAARNDSSSPIYGMPILNVDQSKSVIVLKRSMSSGYAGIDNPLFTADNTSMLFGDAKKMVAEVteeLK 474
Cdd:PRK09444  384 TVLVIGANDTVNPAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAI---LK 460


                  ..
gi 1403602086 475 AL 476
Cdd:PRK09444  461 AL 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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