|
Name |
Accession |
Description |
Interval |
E-value |
| PQQ_membr_DH |
TIGR03074 |
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein ... |
34-800 |
0e+00 |
|
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Pssm-ID: 274418 [Multi-domain] Cd Length: 764 Bit Score: 1216.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 34 KLSQLGGSLYYLIAGIGFALSGILLLALRRNALGLYGLVLLGSTLWALWEVGLDWWQLVPRLALWFALGAVLLLPWARRP 113
Cdd:TIGR03074 1 WLVALGGSWYYLLAGLALLLSAWLLFRRRPAGLWLYAALLLGTLIWALWEVGLDFWPLIPRLGLIAVLGLWLLLPWVRRP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 114 LLGNPSKVNTGLLSLAVVLSGATAVASQFTHPGEIKGELGRESAEMSSTAPQMPDGEWQAYGRTEFGDRYSPLRQITPQN 193
Cdd:TIGR03074 81 RSVGPARRGAGALAGVLAVAVLAALASMFTDPHPIVGALDTEVPATAAAAPAVPAGDWAAYGRTQAGQRYSPLDQINPDN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 194 VHKLQEAWRIRTGDLPTDNDPVELTNQNTPLKANGKLYACTAHSKVLALDPDTGAEIWRFDPQIKSPvgfKGFAHMTCRG 273
Cdd:TIGR03074 161 VGNLKVAWTYHTGDLKTPDDPGEATFQATPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTE---ADRQHQTCRG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 274 VSYYDennyvnadgSPAPKISDAGQAVAIACPRRLYLPTADARLIALNADTGKVCEGFGNQGVIDLTTGIGPFTAGGYYS 353
Cdd:TIGR03074 238 VSYYD---------APAAAAGPAGPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGPTPPGYYYP 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 354 TSPAAITRELVIIGGHVTDNESTNEPSGVIRAYDVHDGRLVWNWDSNNPDDTAPLAPGKTYSRNSANMWSLASVDEKLGM 433
Cdd:TIGR03074 309 TSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNSPNSWSVASYDEKLGL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 434 VFLPLGNQTPDQWGADRTPGAEKYSAGIVALDLANGKVRWNYQFTHHDLWDMDVGSQPTLLDLKTADG-VKPALIAPTKQ 512
Cdd:TIGR03074 389 VYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPKADGtTVPALVAPTKQ 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 513 GSLYVLDRRDGTPIVPIREIPVPQGAVEGDRTAPTQARSDLNLLGPDLTEQAMWGASPFDQMLCRIQFRELRYEGQYTPP 592
Cdd:TIGR03074 469 GQIYVLDRRTGEPIVPVEEVPVPQGAVPGERYSPTQPFSVLTFGPPTLTESDMWGATPFDQLACRIQFKSLRYEGLYTPP 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 593 SVQGSLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRA---EVAAGSKRESETSGVQPNTGAPYAVIMHPFM 669
Cdd:TIGR03074 549 SEQGSLVFPGNLGGFNWGGVAVDPTRQVMFVNPMRLPFVSQLVPRApgdEAPSGAKGKGTEMGLNPNKGTPYAVNMNPFL 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 670 SPLGVPCQAPAWGYVAGIDLTTNQVVWKHKNGTSRDSSP----IPIGLPIGVPSMGGSIVTAGGLGFLSGTLDQYLRAYD 745
Cdd:TIGR03074 629 SPLGIPCQAPPWGYMAAIDLKTGKVVWQHPNGTVRDTGPmgipMPLPIPIGVPTLGGPLATAGGLVFIGATQDNYLRAYD 708
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1567381786 746 TNTGKELWKSRLPAGGQATPMTYTGKDGKQYVLVTAGGHGSLGTKMGDYVIAYKL 800
Cdd:TIGR03074 709 LSTGKELWEARLPAGGQATPMTYMGKDGKQYVVIVAGGHGSSGTKRGDYVIAYAL 763
|
|
| PQQ_mGDH |
cd10280 |
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes ... |
171-800 |
0e+00 |
|
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes belongs to the dehydrogenase family with pyrroloquinoline quinone (PQQ) as cofactor, and is the only subfamily that is bound to the membrane. Glucose dehydrogenase converts D-glucose to D-glucono-1,5-lactone in a reaction that is coupled with the respiratory chain in the periplasmic oxidation of sugars and alcohols in gram-negative bacteria. Ubiquinone functions as the electron acceptor. The alignment model contains an 8-bladed beta-propeller.
Pssm-ID: 199838 [Multi-domain] Cd Length: 616 Bit Score: 916.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 171 WQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPTDnDPVELTNQNTPLKANGKLYACTAHSKVLALDPDTGAEI 250
Cdd:cd10280 1 WPAYGGDPGGTRYSPLDQITPDNVGKLKVAWTYHTGDLPGP-DGNEGTFEATPLKVGGTLYLCTPHNRVIALDAATGKEL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 251 WRFDPQIKspvGFKGFAHMTCRGVSYYDennyvnadgspapkisdaGQAVAIACPRRLYLPTADARLIALNADTGKVCEG 330
Cdd:cd10280 80 WRFDPKAG---ADAAPGHQTCRGVSYWE------------------DGAAAAACARRIFFGTGDARLIALDARTGKPCPD 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 331 FGNQGVIDLTTGIGPFTAGGYYSTSPAAITRELVIIGGHVTDNESTNEPSGVIRAYDVHDGRLVWNWDSNNPDDTAPLA- 409
Cdd:cd10280 139 FGDNGVVDLREGLGRVKPGFYSSTSPPTVYGDLVIVGSAVADNQAVDAPSGVIRAFDVRTGKLVWAFDTIPPPGEAGPDt 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 410 PGKTYSRNSANMWSLASVDEKLGMVFLPLGNQTPDQWGADRtPGAEKYSAGIVALDLANGKVRWNYQFTHHDLWDMDVGS 489
Cdd:cd10280 219 AGAWYTRGGPNVWAGMSADEKLGLVYLPTGSATPDFYGGDR-PGDNLFANSLVALDAATGKRRWHFQTVHHDLWDYDLPA 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 490 QPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDGTPIVPIREIPVPQGAVEGDRTAPTQARSDL--NLLGPDLTEQAMWG 567
Cdd:cd10280 298 QPTLVDVPRDGKTVPAVAQPTKQGFVFVLDRRTGKPLWPVEERPVPQGDVPGERTSPTQPFPTLppPFARQGLTEDDMWG 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 568 ASPFDQMLCRIQFRELRYEGQYTPPSVQGSLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRAEVAAGSKRE 647
Cdd:cd10280 378 ATPFDQLACRIQFRSLRYEGLFTPPSLDGTLIFPGNDGGANWGGAAVDPERGILYVNSNRLPFVIQLVPRAPGDPAGVAG 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 648 SE-----TSGVQPNTGAPYAVIMHPFMSPLGVPCQAPAWGYVAGIDLTTNQVVWKHKNGTSRDSSPIPIGLP--IGVPSM 720
Cdd:cd10280 458 GGeggggGGGPSPQAGTPYGVGRGRFLSPLGLPCQAPPWGTLTAIDLNTGKILWQVPLGTVPDLGPKGIPLPipTGTPNL 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 721 GGSIVTAGGLGFLSGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTGkDGKQYVLVTAGGHGSLGTKMGDYVIAYKL 800
Cdd:cd10280 538 GGPVVTAGGLVFIAATQDNYLRAFDKATGKELWEARLPAGGQATPMTYEV-DGKQYVVIAAGGHGSLGTKRGDSVIAYAL 616
|
|
| Gcd |
COG4993 |
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism]; |
167-800 |
0e+00 |
|
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism];
Pssm-ID: 444017 [Multi-domain] Cd Length: 515 Bit Score: 624.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 167 PDGEWQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPtdndpvELTNQNTPLKANGKLYACTAHSKVLALDPDT 246
Cdd:COG4993 1 DPGDWLAYGGDYAGQRYSPLDQINPDNVKKLKVAWTFSTGDLP------ERGHEATPLVVDGVLYVCTPHNRVFALDAAT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 247 GAEIWRFDPQIKSPVGFkgfAHMTCRGVSYYDennyvnadgspapkisdagqavaiacpRRLYLPTADARLIALNADTGK 326
Cdd:COG4993 75 GKELWRYDPKLPDDAAC---CDVVNRGVAYYD---------------------------GRIFLGTLDGRLVALDAKTGK 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 327 VCEGfgNQgVIDlttgigpfTAGGYYSTSPAAITRELVIIGGHVTDNEstnePSGVIRAYDVHDGRLVWNWDSNnPDDTA 406
Cdd:COG4993 125 VCWD--VK-VGD--------PKKGYTITSAPLVVKDKVIVGGSGGEFG----PRGVVRAYDARTGKLVWRFDTI-PDPGE 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 407 P----LAPGKTYSRNSANMWSLASVDEKLGMVFLPLGNQTPDQWGADRtPGAEKYSAGIVALDLANGKVRWNYQFTHHDL 482
Cdd:COG4993 189 PgaetWPPGDTWKRGGGNVWGTMSYDPELGLVYLPTGNPAPDWNGGQR-PGDNLYSSSIVALDADTGELKWHYQTVPHDL 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 483 WDMDVGSQPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDGTPIVpireipvpqgavegdrtapTQARSDLNLLGpdlTE 562
Cdd:COG4993 268 WDYDGPNEPILVDLPVDGKTRKALVQATKNGFIYVLDRETGEPLV-------------------TQPFVKPPNWA---TE 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 563 QAMWGASPFdqmlcriqfrelryegqYTPPSVQG--SLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRAEV 640
Cdd:COG4993 326 IDMWGATPI-----------------QTPPSLDGktTLICPGALGGKNWGPAAYDPETGLLYVPANELCMDYELVPREYQ 388
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 641 AAgskresetsgvQPNTGAPYAVimhpfmsplgVPCQAPAWGYVAGIDLTTNQVVWKHKNGTsrdsspipiglpigvPSM 720
Cdd:COG4993 389 AG-----------APYLGATLTM----------YPCPAPPWGTLTAIDLNTGKIVWQVPLGF---------------PNW 432
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 721 GGSIVTAGGLGFLsGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTgKDGKQYVLVTAGGHGSLG----TKMGDYVI 796
Cdd:COG4993 433 GGPLATAGGLVFI-GTLDGYLRAFDAKTGKELWKFRLPSGGQATPMTYE-VDGKQYVAVAAGGGGWLGlglyTPQGDYLI 510
|
....
gi 1567381786 797 AYKL 800
Cdd:COG4993 511 AFAL 514
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
226-475 |
2.91e-06 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 49.32 E-value: 2.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 226 ANGKLYACTAHSKVLALDPDTGAEIWRFDPQ---IKSPVGFKG--FAHMTCRGVSYYDEnnyvnADG-------SPAPKI 293
Cdd:pfam13360 32 DGGRLFVATGGGQLVALDAATGKLLWRQTLSgevLGAPLVAGGrvFVVAGDGSLIALDA-----ADGrrlwsyqRSGEPL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 294 SDAGQAVAIACPRRLYLPTADARLIALNADTGKVCegfgNQGVIDLTTGIGPFTAGGYYSTSPaAITRELVIIGGHvtdn 373
Cdd:pfam13360 107 ALRSSGSPAVVGDTVVAGFSSGKLVALDPATGKVR----WEAPLAAPRGTNELERLVDITGTP-VVAGGRVFASAY---- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 374 estnepSGVIRAYDVHDGRLVWNWDSNNPddTAPLAPGktysrnsanmwslasvdeklGMVFLPLGNQTpdqwgadrtpg 453
Cdd:pfam13360 178 ------QGRLVAFDAATGRRLWTREISGP--NGPILDG--------------------DLLYVVSDDGE----------- 218
|
250 260
....*....|....*....|..
gi 1567381786 454 aekysagIVALDLANGKVRWNY 475
Cdd:pfam13360 219 -------LYALDRATGAVVWKT 233
|
|
| PRK11138 |
PRK11138 |
outer membrane biogenesis protein BamB; Provisional |
222-402 |
1.64e-04 |
|
outer membrane biogenesis protein BamB; Provisional
Pssm-ID: 236857 [Multi-domain] Cd Length: 394 Bit Score: 44.92 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 222 TPLKANGKLYACTAHSKVLALDPDTGAEIWRFDPQIKspvgfKGFAhmtcrgvsyydennyvnADGSPApKISdAGQAVA 301
Cdd:PRK11138 64 HPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEK-----DGWF-----------------SKNKSA-LLS-GGVTVA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 302 IacpRRLYLPTADARLIALNADTGKVcegfgnqgvidlttgIGPFTAGGYYSTSPaAITRELVIIgghvtdnestNEPSG 381
Cdd:PRK11138 120 G---GKVYIGSEKGQVYALNAEDGEV---------------AWQTKVAGEALSRP-VVSDGLVLV----------HTSNG 170
|
170 180
....*....|....*....|.
gi 1567381786 382 VIRAYDVHDGRLVWNWDSNNP 402
Cdd:PRK11138 171 MLQALNESDGAVKWTVNLDVP 191
|
|
| PQQ |
smart00564 |
beta-propeller repeat; Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline ... |
222-254 |
4.14e-04 |
|
beta-propeller repeat; Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Pssm-ID: 128836 [Multi-domain] Cd Length: 33 Bit Score: 38.28 E-value: 4.14e-04
10 20 30
....*....|....*....|....*....|...
gi 1567381786 222 TPLKANGKLYACTAHSKVLALDPDTGAEIWRFD 254
Cdd:smart00564 1 PVVLSDGTVYVGSTDGTLYALDAKTGEILWTYK 33
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PQQ_membr_DH |
TIGR03074 |
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein ... |
34-800 |
0e+00 |
|
membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Pssm-ID: 274418 [Multi-domain] Cd Length: 764 Bit Score: 1216.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 34 KLSQLGGSLYYLIAGIGFALSGILLLALRRNALGLYGLVLLGSTLWALWEVGLDWWQLVPRLALWFALGAVLLLPWARRP 113
Cdd:TIGR03074 1 WLVALGGSWYYLLAGLALLLSAWLLFRRRPAGLWLYAALLLGTLIWALWEVGLDFWPLIPRLGLIAVLGLWLLLPWVRRP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 114 LLGNPSKVNTGLLSLAVVLSGATAVASQFTHPGEIKGELGRESAEMSSTAPQMPDGEWQAYGRTEFGDRYSPLRQITPQN 193
Cdd:TIGR03074 81 RSVGPARRGAGALAGVLAVAVLAALASMFTDPHPIVGALDTEVPATAAAAPAVPAGDWAAYGRTQAGQRYSPLDQINPDN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 194 VHKLQEAWRIRTGDLPTDNDPVELTNQNTPLKANGKLYACTAHSKVLALDPDTGAEIWRFDPQIKSPvgfKGFAHMTCRG 273
Cdd:TIGR03074 161 VGNLKVAWTYHTGDLKTPDDPGEATFQATPLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTE---ADRQHQTCRG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 274 VSYYDennyvnadgSPAPKISDAGQAVAIACPRRLYLPTADARLIALNADTGKVCEGFGNQGVIDLTTGIGPFTAGGYYS 353
Cdd:TIGR03074 238 VSYYD---------APAAAAGPAGPAAPADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGPTPPGYYYP 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 354 TSPAAITRELVIIGGHVTDNESTNEPSGVIRAYDVHDGRLVWNWDSNNPDDTAPLAPGKTYSRNSANMWSLASVDEKLGM 433
Cdd:TIGR03074 309 TSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNSPNSWSVASYDEKLGL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 434 VFLPLGNQTPDQWGADRTPGAEKYSAGIVALDLANGKVRWNYQFTHHDLWDMDVGSQPTLLDLKTADG-VKPALIAPTKQ 512
Cdd:TIGR03074 389 VYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPKADGtTVPALVAPTKQ 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 513 GSLYVLDRRDGTPIVPIREIPVPQGAVEGDRTAPTQARSDLNLLGPDLTEQAMWGASPFDQMLCRIQFRELRYEGQYTPP 592
Cdd:TIGR03074 469 GQIYVLDRRTGEPIVPVEEVPVPQGAVPGERYSPTQPFSVLTFGPPTLTESDMWGATPFDQLACRIQFKSLRYEGLYTPP 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 593 SVQGSLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRA---EVAAGSKRESETSGVQPNTGAPYAVIMHPFM 669
Cdd:TIGR03074 549 SEQGSLVFPGNLGGFNWGGVAVDPTRQVMFVNPMRLPFVSQLVPRApgdEAPSGAKGKGTEMGLNPNKGTPYAVNMNPFL 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 670 SPLGVPCQAPAWGYVAGIDLTTNQVVWKHKNGTSRDSSP----IPIGLPIGVPSMGGSIVTAGGLGFLSGTLDQYLRAYD 745
Cdd:TIGR03074 629 SPLGIPCQAPPWGYMAAIDLKTGKVVWQHPNGTVRDTGPmgipMPLPIPIGVPTLGGPLATAGGLVFIGATQDNYLRAYD 708
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1567381786 746 TNTGKELWKSRLPAGGQATPMTYTGKDGKQYVLVTAGGHGSLGTKMGDYVIAYKL 800
Cdd:TIGR03074 709 LSTGKELWEARLPAGGQATPMTYMGKDGKQYVVIVAGGHGSSGTKRGDYVIAYAL 763
|
|
| PQQ_mGDH |
cd10280 |
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes ... |
171-800 |
0e+00 |
|
Membrane-bound PQQ-dependent glucose dehydrogenase; This bacterial subfamily of enzymes belongs to the dehydrogenase family with pyrroloquinoline quinone (PQQ) as cofactor, and is the only subfamily that is bound to the membrane. Glucose dehydrogenase converts D-glucose to D-glucono-1,5-lactone in a reaction that is coupled with the respiratory chain in the periplasmic oxidation of sugars and alcohols in gram-negative bacteria. Ubiquinone functions as the electron acceptor. The alignment model contains an 8-bladed beta-propeller.
Pssm-ID: 199838 [Multi-domain] Cd Length: 616 Bit Score: 916.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 171 WQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPTDnDPVELTNQNTPLKANGKLYACTAHSKVLALDPDTGAEI 250
Cdd:cd10280 1 WPAYGGDPGGTRYSPLDQITPDNVGKLKVAWTYHTGDLPGP-DGNEGTFEATPLKVGGTLYLCTPHNRVIALDAATGKEL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 251 WRFDPQIKspvGFKGFAHMTCRGVSYYDennyvnadgspapkisdaGQAVAIACPRRLYLPTADARLIALNADTGKVCEG 330
Cdd:cd10280 80 WRFDPKAG---ADAAPGHQTCRGVSYWE------------------DGAAAAACARRIFFGTGDARLIALDARTGKPCPD 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 331 FGNQGVIDLTTGIGPFTAGGYYSTSPAAITRELVIIGGHVTDNESTNEPSGVIRAYDVHDGRLVWNWDSNNPDDTAPLA- 409
Cdd:cd10280 139 FGDNGVVDLREGLGRVKPGFYSSTSPPTVYGDLVIVGSAVADNQAVDAPSGVIRAFDVRTGKLVWAFDTIPPPGEAGPDt 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 410 PGKTYSRNSANMWSLASVDEKLGMVFLPLGNQTPDQWGADRtPGAEKYSAGIVALDLANGKVRWNYQFTHHDLWDMDVGS 489
Cdd:cd10280 219 AGAWYTRGGPNVWAGMSADEKLGLVYLPTGSATPDFYGGDR-PGDNLFANSLVALDAATGKRRWHFQTVHHDLWDYDLPA 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 490 QPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDGTPIVPIREIPVPQGAVEGDRTAPTQARSDL--NLLGPDLTEQAMWG 567
Cdd:cd10280 298 QPTLVDVPRDGKTVPAVAQPTKQGFVFVLDRRTGKPLWPVEERPVPQGDVPGERTSPTQPFPTLppPFARQGLTEDDMWG 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 568 ASPFDQMLCRIQFRELRYEGQYTPPSVQGSLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRAEVAAGSKRE 647
Cdd:cd10280 378 ATPFDQLACRIQFRSLRYEGLFTPPSLDGTLIFPGNDGGANWGGAAVDPERGILYVNSNRLPFVIQLVPRAPGDPAGVAG 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 648 SE-----TSGVQPNTGAPYAVIMHPFMSPLGVPCQAPAWGYVAGIDLTTNQVVWKHKNGTSRDSSPIPIGLP--IGVPSM 720
Cdd:cd10280 458 GGeggggGGGPSPQAGTPYGVGRGRFLSPLGLPCQAPPWGTLTAIDLNTGKILWQVPLGTVPDLGPKGIPLPipTGTPNL 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 721 GGSIVTAGGLGFLSGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTGkDGKQYVLVTAGGHGSLGTKMGDYVIAYKL 800
Cdd:cd10280 538 GGPVVTAGGLVFIAATQDNYLRAFDKATGKELWEARLPAGGQATPMTYEV-DGKQYVVIAAGGHGSLGTKRGDSVIAYAL 616
|
|
| Gcd |
COG4993 |
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism]; |
167-800 |
0e+00 |
|
Glucose dehydrogenase, PQQ-dependent [Carbohydrate transport and metabolism];
Pssm-ID: 444017 [Multi-domain] Cd Length: 515 Bit Score: 624.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 167 PDGEWQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPtdndpvELTNQNTPLKANGKLYACTAHSKVLALDPDT 246
Cdd:COG4993 1 DPGDWLAYGGDYAGQRYSPLDQINPDNVKKLKVAWTFSTGDLP------ERGHEATPLVVDGVLYVCTPHNRVFALDAAT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 247 GAEIWRFDPQIKSPVGFkgfAHMTCRGVSYYDennyvnadgspapkisdagqavaiacpRRLYLPTADARLIALNADTGK 326
Cdd:COG4993 75 GKELWRYDPKLPDDAAC---CDVVNRGVAYYD---------------------------GRIFLGTLDGRLVALDAKTGK 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 327 VCEGfgNQgVIDlttgigpfTAGGYYSTSPAAITRELVIIGGHVTDNEstnePSGVIRAYDVHDGRLVWNWDSNnPDDTA 406
Cdd:COG4993 125 VCWD--VK-VGD--------PKKGYTITSAPLVVKDKVIVGGSGGEFG----PRGVVRAYDARTGKLVWRFDTI-PDPGE 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 407 P----LAPGKTYSRNSANMWSLASVDEKLGMVFLPLGNQTPDQWGADRtPGAEKYSAGIVALDLANGKVRWNYQFTHHDL 482
Cdd:COG4993 189 PgaetWPPGDTWKRGGGNVWGTMSYDPELGLVYLPTGNPAPDWNGGQR-PGDNLYSSSIVALDADTGELKWHYQTVPHDL 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 483 WDMDVGSQPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDGTPIVpireipvpqgavegdrtapTQARSDLNLLGpdlTE 562
Cdd:COG4993 268 WDYDGPNEPILVDLPVDGKTRKALVQATKNGFIYVLDRETGEPLV-------------------TQPFVKPPNWA---TE 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 563 QAMWGASPFdqmlcriqfrelryegqYTPPSVQG--SLVYPGNVGVFNWGSVSVDPVRQLLFTTPNYMAFVSKMVPRAEV 640
Cdd:COG4993 326 IDMWGATPI-----------------QTPPSLDGktTLICPGALGGKNWGPAAYDPETGLLYVPANELCMDYELVPREYQ 388
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 641 AAgskresetsgvQPNTGAPYAVimhpfmsplgVPCQAPAWGYVAGIDLTTNQVVWKHKNGTsrdsspipiglpigvPSM 720
Cdd:COG4993 389 AG-----------APYLGATLTM----------YPCPAPPWGTLTAIDLNTGKIVWQVPLGF---------------PNW 432
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 721 GGSIVTAGGLGFLsGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTgKDGKQYVLVTAGGHGSLG----TKMGDYVI 796
Cdd:COG4993 433 GGPLATAGGLVFI-GTLDGYLRAFDAKTGKELWKFRLPSGGQATPMTYE-VDGKQYVAVAAGGGGWLGlglyTPQGDYLI 510
|
....
gi 1567381786 797 AYKL 800
Cdd:COG4993 511 AFAL 514
|
|
| PQQ_DH_like |
cd00216 |
PQQ-dependent dehydrogenases and related proteins; This family is composed of dehydrogenases ... |
192-799 |
1.36e-87 |
|
PQQ-dependent dehydrogenases and related proteins; This family is composed of dehydrogenases with pyrroloquinoline quinone (PQQ) as a cofactor, such as ethanol, methanol, and membrane-bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller, and the family also includes distantly related proteins which are not enzymatically active and do not bind PQQ.
Pssm-ID: 199833 [Multi-domain] Cd Length: 434 Bit Score: 284.11 E-value: 1.36e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 192 QNVHKLQEAWRIRTGDLPtdndpvELTNQNTPLKANGKLYACTAHSKVLALDPDTGAEIWRFDPQIKsPVGFKGFAHMTC 271
Cdd:cd00216 2 DNVFQLTPAWSFSTGDGG------NRGSELTPIVVDGVMYATTSFSRVFALDADDGKEIWSYDPALK-DGWFEACCDLVN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 272 RGVSYYdennyvnadgspapkisdagqavaiacPRRLYLPTADARLIALNADTGKVCEGFGNQGVidlttgigpftAGGY 351
Cdd:cd00216 75 RGVAVW---------------------------GGKVYIGVLDGRVYALNAETGKVAWKVKNADV-----------LGGY 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 352 YSTSPAAITRELVIIGGhVTDNESTnepSGVIRAYDVHDGRLVWNWDSNNPDDTAPLAP-------------GKTYSRNS 418
Cdd:cd00216 117 TATSAPVVVDGLVIIGS-SGDEFGV---RGYLTAYDVATGEEKWRFYLVMPDPNLLPGKdstvtdrntptgdEHTWTSGG 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 419 ANMWSLASVDEKLGMVFLPLGNQTPDQWGADRTPGAEKYSAGIVALDLANGKVRWNYQFTHHDLWDMDVGSQPTLLDLKT 498
Cdd:cd00216 193 GTGWSSAAYDAELNLIYVGGGNPTPWNWGGNRTPGDNLYTSSIVAVNADTGEMKWQYQTTPHDAWDYDGDNTPVLADIKV 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 499 ADGVKPALIAPTKQGSLYVLDRRDGtpivpireipvpqgavegdrtaptqarsdlnllgpdlteQAMWgASPFDQMlcri 578
Cdd:cd00216 273 KGKKVKVLFAPAKNGNFYVLDRRNG---------------------------------------ELVS-ARPLVPD---- 308
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 579 qfrelryegqytppsvqgslvypgnvgvfnwgsvSVDPVRQLLFTTPNymafvskmvpraevaagskresetsgvqpntg 658
Cdd:cd00216 309 ----------------------------------SYDPDRELFYVPAN-------------------------------- 322
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 659 apyavimhpfmsplgvpcqapawGYVAGIDLTTNQVVWKHkngtsrdsspipiglPIGVPSMGGSIVTAGGLGFLsGTLD 738
Cdd:cd00216 323 -----------------------GRIMALDPVTGVVVWEK---------------SELHPLLGGPLSTAGNLVFV-GTSD 363
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1567381786 739 QYLRAYDTNTGKELWKSRLPAGGQATPMTYTgKDGKQYVLVTAGGHGSL-----------GTKMGDYVIAYK 799
Cdd:cd00216 364 GYLKAYNADTGEKLWQQKVPSGFQAEPVTYE-VDGEQYVLIQAGGGGAFplwggmadltrGTQMGGTVVVYK 434
|
|
| PQQ_ADH_I |
cd10277 |
Ethanol dehydrogenase, a bacterial quinoprotein (PQQ-dependent type I alcohol dehydrogenase); ... |
168-782 |
9.22e-68 |
|
Ethanol dehydrogenase, a bacterial quinoprotein (PQQ-dependent type I alcohol dehydrogenase); This bacterial family of homodimeric ethanol dehydrogenases utilize pyrroloquinoline quinone (PQQ) as a cofactor. It represents proteins whose expression may be induced by ethanol, and which are similar to quinoprotein methanol dehydrogenases, but have higher specificities for ethanol and other primary and secondary alcohols. Dehydrogenases with PQQ cofactors, such as ethanol, methanol, and membrane-bound glucose dehydrogenases, form an 8-bladed beta-propeller.
Pssm-ID: 199835 [Multi-domain] Cd Length: 529 Bit Score: 233.73 E-value: 9.22e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 168 DGEWQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPTdndpvelTNQNTPLKANGKLYACTAHSKVLALDPDTG 247
Cdd:cd10277 8 TGNWLTYGRGYNGQRYSPLKQINTDNVKNLVPAWSFSFGGKQR-------GQESQPIVNDGVMYVTTSYNRVFAIDAKTG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 248 AEIWRFDPQIksPVGFKGFAHMTCRGVSYYDENnyvnadgspapkisdagqavaiacprrLYLPTADARLIALNADTGKV 327
Cdd:cd10277 81 KELWKYKHRL--PEDIRPCCDVVNRGVALYGDK---------------------------VYFGTLDAHLVALDAKTGKV 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 328 cegFGNQGVIDLTTGigpftaggYYSTSPAAITRELVIIGGhvtdneSTNE--PSGVIRAYDVHDGRLVWNW---DSNNP 402
Cdd:cd10277 132 ---VWKKKVADYKAG--------YSMTLAPLVVKGKVIVGV------SGGEfgVRGFIAALDAETGKEVWRTytvPGPGE 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 403 DDTAPLAPGKTYSRNSANMWSLASVDEKLGMVFLPLGNQTPdqWGADRTPGAEKYSAGIVALDLANGKVRWNYQFTHHDL 482
Cdd:cd10277 195 PGSTDTWPGDAWKTGGGATWLTGTYDPETNLLYWGVGNPAP--WNGDLRPGDNLYTSSVLALDPDTGKIKWHYQYTPNDT 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 483 WDMDVGSQPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDG-----TPIVpiREIPVPQGAVEGDRTAPTQARsdlnllg 557
Cdd:cd10277 273 WDYDGVNEPVLFDYTKNGKPVKALVHADRNGFFYVLDRTNGkliwaTPFV--KKITWASIDLKTGRPIYDEDK------- 343
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 558 pdlteqamwgaspfdqmlcriqfrelryEGQYTPPSVQgslVYPGNVGVFNWGSVSVDPVRQLLFttpnymafvskmVPR 637
Cdd:cd10277 344 ----------------------------VPPKKGKTVD---FCPSFLGGKNWPPMAYSPDTGLFY------------VPA 380
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 638 AEVAAGSKRESetsgVQPNTGAPYAVimhpfMSPLGVPCQAPAWGYVAGIDLTTNQVVWKHKNGTsrdsspipiglpigv 717
Cdd:cd10277 381 NHWCMDLTGEP----VSYKKGAAYLG-----AGFTIKPPFEDHIGELQAIDPTTGKKVWEHKTPL--------------- 436
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1567381786 718 PSMGGSIVTAGGLGFlSGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTgKDGKQYVLVTAG 782
Cdd:cd10277 437 PLWGGVLTTAGGLVF-TGTPDGYFRAFDAKTGKELWEFQTGSGIIGPPVTWE-VDGKQYVAVLSG 499
|
|
| PQQ_MDH |
cd10278 |
Large subunit of methanol dehydrogenase (moxF); Methanol dehydrogenase is a key enzyme in the ... |
171-782 |
2.26e-60 |
|
Large subunit of methanol dehydrogenase (moxF); Methanol dehydrogenase is a key enzyme in the utilization of C1 compounds as a source of energy and carbon by bacteria. It catalyzes the oxidation of methanol to formaldehyde, transfering two electrons per methanol to cytochrome c(L) as the acceptor. Methanol dehydrogenase belongs to a family of dehydrogenases with pyrroloquinoline quinone (PQQ) as cofactor, which also includes dehydrogenases specific to other alcohols and membrane-bound glucose dehydrogenases. This alignment model for the large subunit contains an 8-bladed beta-propeller; the functional enzyme forms a heterotetramer composed of two large and two small subunits.
Pssm-ID: 199836 [Multi-domain] Cd Length: 553 Bit Score: 214.11 E-value: 2.26e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 171 WQAYGRTEFGDRYSPLRQITPQNVHKLQEAWRIRTGDLPTdndpveltNQNTPLKANGKLYACTAH-SKVLALDPDTGAE 249
Cdd:cd10278 1 WVMPGKDYANTRYSPLAQINKDNVKNLKVAWTFSTGVLRG--------HEGAPLVVGDTMYVVTPFpNNVYALDLNDPGK 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 250 I-WRFDPQIKSPVgfkgFAHMTC----RGVSYydennyvnADGspapkisdagqavaiacprRLYLPTADARLIALNADT 324
Cdd:cd10278 73 IlWKYKPKQDPSA----VAVACCdvvnRGLAY--------ADG-------------------KIFFNQLDGHLVALDAKT 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 325 GKVcegFGNQGVIDLTTGigpftaggyySTSPAA--ITRELVIIGghvtdnESTNE--PSGVIRAYDVHDGRLVWNWDSN 400
Cdd:cd10278 122 GKE---VWKVKNGDPKVG----------ETLTMAplVVKDKVIVG------ISGGEfgVRGYVTAYDLKTGKLVWRAYST 182
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 401 NPDDTAPLAP----------GKTYSRNS----------ANMWSLASVDEKLGMVFLPLGNqtPDQWGADRTPGAEKYSAG 460
Cdd:cd10278 183 GPDKDVLIGPdfnpfnphdgGKDLGLSTwpgdawkiggGTNWGWYSYDPKLNLVYYGTGN--PGPWNPTQRPGDNKWSMT 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 461 IVALDLANGKVRWNYQFTHHDLWDMDVGSQPTLLDLkTADGVK-PALIAPTKQGSLYVLDRRDGTPIVPIREIPVpqgav 539
Cdd:cd10278 261 IFARDPDTGEAKWAYQMTPHDEWDYDGVNEMILVDQ-TVDGKKrKLLVHFDRNGFVYTLDRTTGELLSAEKFDPV----- 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 540 egdrtaptqarsdLNLLGPDLTEQamwgaspfdqmlcriqfRELRYEGQYTPPSVQGSLVYPGNVGVFNWGSVSVDPVRQ 619
Cdd:cd10278 335 -------------NNWKGVDLKTG-----------------RPVKDPEKSTHMDHNVTDICPSAMGGKDQQPSSYSPKTG 384
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 620 LLFTTPNY--MAFVSKMVPraeVAAGskresetsgvQPNTGApyAVIMHPfmSPLGVPCQAPAWgyvagiDLTTNQVVWK 697
Cdd:cd10278 385 LFYVPTNHlcMDYEPFEVN---YTAG----------QPYVGA--TLAMYP--GPGGHMGQFKAW------DPVTGKTKWE 441
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 698 HKNgtsrdsspipiglpiGVPSMGGSIVTAGGLGFLsGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTGkDGKQYV 777
Cdd:cd10278 442 IKE---------------RFPVWSGTLATAGGLVFY-GTLDGWFKAVDAKTGKLLWKFKLPSGIIGNPITYKH-DGKQYV 504
|
....*
gi 1567381786 778 LVTAG 782
Cdd:cd10278 505 AVLSG 509
|
|
| PQQ_ADH_II |
cd10279 |
PQQ_like domain of the quinohemoprotein alcohol dehydrogenase (type II); This family of ... |
169-799 |
1.70e-58 |
|
PQQ_like domain of the quinohemoprotein alcohol dehydrogenase (type II); This family of monomeric and soluble type II alcohol dehydrogenases utilizes pyrroloquinoline quinone (PQQ) as a cofactor and is related to ethanol, methanol, and membrane-bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Pssm-ID: 199837 [Multi-domain] Cd Length: 549 Bit Score: 208.65 E-value: 1.70e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 169 GEWQAYGRTEFGDRYSPLRQITPQNVHKLQEAWrirTGDLPTDNDPVEltnqnTPLKANGKLYACTAHSKVLALDPDTGA 248
Cdd:cd10279 1 GNWLSYGRDYDEQRFSPLTQINRSNVGQLGLAW---YFDLDTNRGQEA-----TPLVVDGVMYVSGPWSVVYALDARTGK 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 249 EIWRFDPQIKSPVGFKGFAHMTCRGVSYYDEnnyvnadgspapkisdagqavaiacprRLYLPTADARLIALNADTGKVc 328
Cdd:cd10279 73 LLWQYDPEVDRESGRKACCDVVNRGVAVWDG---------------------------KVFVGTLDGRLIALDAKTGKE- 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 329 egfgnqgVIDLTTGIGpftAGGYYSTSPAAITRELVIIG---------GHVTdnestnepsgvirAYDVHDGRLVWNW-- 397
Cdd:cd10279 125 -------VWSVDTIDP---RKPYTITGAPRVAKGKVVIGnggaefgvrGYVS-------------AYDAETGKLVWRFyt 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 398 ---DSNNPDDTAPLA-------PGK-TYSRNSANMWSLASVDEKLGMVFLPLGNQTPdqWG-ADRTPGA--EKYSAGIVA 463
Cdd:cd10279 182 vpgNPAKPFEHASLEaaaatwwTGEwWRTGGGGTVWDSITYDPELDLLYIGTGNGSP--WNrKVRSPGGgdNLFLSSIVA 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 464 LDLANGKVRWNYQFTHHDLWDMDVGSQPTLLDLKTADGVKPALIAPTKQGSLYVLDRRDG-----TPIVPIreipvpqga 538
Cdd:cd10279 260 LDADTGRYKWHYQTTPGDTWDYTATQPIILADLEIDGKPRKVLMHAPKNGFFYVLDRATGkllsaEPFVPV--------- 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 539 vegdrtapTQARS-DLNLLGPDLTEQAmwgaspfdqmlcriqfrelRYEgqytppsVQGSLVYPGNVGVFNWGSVSVDPV 617
Cdd:cd10279 331 --------NWATGiDLKTGRPIENPEA-------------------RYT-------KGPKLVFPGPLGAHNWHPMSYNPD 376
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 618 RQLLFttpnymafvskmVPRAEVAAGSKRESETSGVQP---NTGAPYAVIMHPfMSPLGVPCQAPAWGYVAgIDLTTNQV 694
Cdd:cd10279 377 TGLVY------------IPAQEIPAVYEDDPGDFGYNPlgwNTGITPDATPPP-AAAKRALRKATRGRLVA-WDPVTQKA 442
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 695 VWKhkngtsrdsspipigLPIGVPSMGGSIVTAGGLGFlSGTLDQYLRAYDTNTGKELWKSRLPAGGQATPMTYTgKDGK 774
Cdd:cd10279 443 AWR---------------VEHPGPWNGGVLATAGNLVF-QGTADGELAAYDARTGEKLWSFDTGSGIVAAPMTYS-VDGE 505
|
650 660
....*....|....*....|....*
gi 1567381786 775 QYVLVTAGGHGSLGTKMGDYVIAYK 799
Cdd:cd10279 506 QYVAVLAGWGGAGALSGGPPGAAGK 530
|
|
| BamB_YfgL |
cd10276 |
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is ... |
220-525 |
1.95e-10 |
|
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is a non-essential component of the beta-barrel assembly machinery (Bam), a multi-subunit complex that inserts proteins with beta-barrel topology into the outer membrane. BamB has been found to interact with BamA, which in turn binds and stabilizes pre-folded beta-barrel proteins; it has been suggested that BamB participates in the stabilization.
Pssm-ID: 199834 [Multi-domain] Cd Length: 358 Bit Score: 63.12 E-value: 1.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 220 QNTPLKANGKLYACTAHSKVLALDPDTGAEIWrfdpqiKSPVGFKGFahmTCRGVSYYD-------ENNYVNA----DGS 288
Cdd:cd10276 31 DLTPVVAGDMVYAADANGQVSAFNATTGKIIW------ETSLSGKGF---LGGTPAVGNgkifvgtESGYLYAldakDGS 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 289 PA--PKISDAGqavaIACPR-----RLYLPTADARLIALNADTGKVCEGFGNQgvidlttgigpfTAGGYYSTSPAAITR 361
Cdd:cd10276 102 ELwrTEVSDSQ----LLSPPtyadgKIYVGTGDGRLYYCNAETGKVVWNRTST------------APELSLRGGAAPVGA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 362 ELVIIGGhvtdnestnEPSGVIRAYDVHDGRLVWNWDSNNPDDTAPLApgkTYSRNSANMwslasvDEKLGMVFlpLGNQ 441
Cdd:cd10276 166 YDVVFVG---------DGNGTVVALNTGTGVDIWEFSVSEPRGRTELP---RMIDSSVTY------VVVGGYLY--STSY 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 442 TPDQWGADRTPG----AEKYSAG-------------------IVALDLANGKVRWNYqfthhdlwDMDVGSQPTLLDLKT 498
Cdd:cd10276 226 QGYLVALDFESGqflwSRKASGGtststdangrvyvgdgegsLYCLDASTGDELWSQ--------TVLLGRVLSSPAIYV 297
|
330 340
....*....|....*....|....*..
gi 1567381786 499 ADGVkpaLIAPTKQGSLYVLDRRDGTP 525
Cdd:cd10276 298 GVYI---YVTDNAEGYLYCLKDNDGLT 321
|
|
| PQQ |
COG1520 |
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell ... |
184-526 |
5.03e-08 |
|
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441129 [Multi-domain] Cd Length: 370 Bit Score: 55.98 E-value: 5.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 184 SPLRQITPQNvhKLQEAWRIRTGDlPTDNDPVELTnqntPLKANGKLYACTAHSKVLALDPDTGAEIWRFDP--QIKSPV 261
Cdd:COG1520 21 APLPEFEPSV--KVKQLWSASVGD-GVGKGYSRLA----PAVAGDRVYAADADGRVAALDAATGKELWRVDLgePLSGGV 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 262 GfkgfahmtcrgvsyydennyvnADGspapkisdagqavaiacpRRLYLPTADARLIALNADTGKVcegfgnQGVIDLTT 341
Cdd:COG1520 94 G----------------------ADG------------------GLVVVGTEDGEVIALDADDGEE------LWRARLSS 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 342 GIgpftaggyysTSPAAITRELVIIggHVTDnestnepsGVIRAYDVHDGRLVWNWDSNNPddtaPLApgktySRNSAnm 421
Cdd:COG1520 128 EV----------LAAPAVAGGRVVV--RTGD--------GRVYALDAATGERLWSYQRPVP----ALT-----LRGTS-- 176
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 422 wSLASVDeklGMVFLPLGNqtpdqwgadrtpgaekysaG-IVALDLANGKVRWNYQFT----HHDLWDM-DVGSQPTLLD 495
Cdd:COG1520 177 -SPVIVG---GAVLVGFAN-------------------GkLVALDLANGQPLWEQRVAqprgRTELERLvDVDGTPVVDG 233
|
330 340 350
....*....|....*....|....*....|.
gi 1567381786 496 lktadgvkPALIAPTKQGSLYVLDRRDGTPI 526
Cdd:COG1520 234 --------GVVYAVAYQGRLAALDLRSGRVL 256
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
226-475 |
2.91e-06 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 49.32 E-value: 2.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 226 ANGKLYACTAHSKVLALDPDTGAEIWRFDPQ---IKSPVGFKG--FAHMTCRGVSYYDEnnyvnADG-------SPAPKI 293
Cdd:pfam13360 32 DGGRLFVATGGGQLVALDAATGKLLWRQTLSgevLGAPLVAGGrvFVVAGDGSLIALDA-----ADGrrlwsyqRSGEPL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 294 SDAGQAVAIACPRRLYLPTADARLIALNADTGKVCegfgNQGVIDLTTGIGPFTAGGYYSTSPaAITRELVIIGGHvtdn 373
Cdd:pfam13360 107 ALRSSGSPAVVGDTVVAGFSSGKLVALDPATGKVR----WEAPLAAPRGTNELERLVDITGTP-VVAGGRVFASAY---- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 374 estnepSGVIRAYDVHDGRLVWNWDSNNPddTAPLAPGktysrnsanmwslasvdeklGMVFLPLGNQTpdqwgadrtpg 453
Cdd:pfam13360 178 ------QGRLVAFDAATGRRLWTREISGP--NGPILDG--------------------DLLYVVSDDGE----------- 218
|
250 260
....*....|....*....|..
gi 1567381786 454 aekysagIVALDLANGKVRWNY 475
Cdd:pfam13360 219 -------LYALDRATGAVVWKT 233
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
682-784 |
6.47e-06 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 48.17 E-value: 6.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 682 GYVAGIDLTTNQVVWKHKNGTSRDSspipiglpiGVPSMGGSIVTAGGLGFLSgtldqylrAYDTNTGKELWKSRLPAGG 761
Cdd:pfam13360 3 GVVTALDAATGAELWRVDLETGLGG---------GVAVDGGRLFVATGGGQLV--------ALDAATGKLLWRQTLSGEV 65
|
90 100
....*....|....*....|...
gi 1567381786 762 QATPMTytgkDGKQYVLVTAGGH 784
Cdd:pfam13360 66 LGAPLV----AGGRVFVVAGDGS 84
|
|
| PQQ_2 |
pfam13360 |
PQQ-like domain; This domain contains several repeats of the PQQ repeat. |
239-474 |
3.42e-05 |
|
PQQ-like domain; This domain contains several repeats of the PQQ repeat.
Pssm-ID: 433144 [Multi-domain] Cd Length: 233 Bit Score: 45.86 E-value: 3.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 239 VLALDPDTGAEIWRFDPQIK--SPVGFKG---FAHMTCRGVSYYDEnnyvnADGSPAPKISDAGQAVAIACPR--RLYLP 311
Cdd:pfam13360 5 VTALDAATGAELWRVDLETGlgGGVAVDGgrlFVATGGGQLVALDA-----ATGKLLWRQTLSGEVLGAPLVAggRVFVV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 312 TADARLIALNADTGKVcegfgnqgvidLTTGIGPFTAGGYYSTSPAAITRELVIIGghvtdnestnEPSGVIRAYDVHDG 391
Cdd:pfam13360 80 AGDGSLIALDAADGRR-----------LWSYQRSGEPLALRSSGSPAVVGDTVVAG----------FSSGKLVALDPATG 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 392 RLVWNwdsnnpddtAPLApgktYSRNSANMWSLASVdeklgmvflplgNQTPDQWGaDRTpGAEKYSAGIVALDLANGKV 471
Cdd:pfam13360 139 KVRWE---------APLA----APRGTNELERLVDI------------TGTPVVAG-GRV-FASAYQGRLVAFDAATGRR 191
|
...
gi 1567381786 472 RWN 474
Cdd:pfam13360 192 LWT 194
|
|
| BamB_YfgL |
cd10276 |
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is ... |
682-777 |
5.41e-05 |
|
Beta-barrel assembly machinery (Bam) complex component B and related proteins; BamB (YflG) is a non-essential component of the beta-barrel assembly machinery (Bam), a multi-subunit complex that inserts proteins with beta-barrel topology into the outer membrane. BamB has been found to interact with BamA, which in turn binds and stabilizes pre-folded beta-barrel proteins; it has been suggested that BamB participates in the stabilization.
Pssm-ID: 199834 [Multi-domain] Cd Length: 358 Bit Score: 46.17 E-value: 5.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 682 GYVAGIDLTTNQVVWKHKNGTSrdsspipiGLPIGVPSMGGSIVTAGglgflsgTLDQYLRAYDTNTGKELWKSRLPAGG 761
Cdd:cd10276 48 GQVSAFNATTGKIIWETSLSGK--------GFLGGTPAVGNGKIFVG-------TESGYLYALDAKDGSELWRTEVSDSQ 112
|
90
....*....|....*.
gi 1567381786 762 QATPMTYTgkDGKQYV 777
Cdd:cd10276 113 LLSPPTYA--DGKIYV 126
|
|
| PRK11138 |
PRK11138 |
outer membrane biogenesis protein BamB; Provisional |
222-402 |
1.64e-04 |
|
outer membrane biogenesis protein BamB; Provisional
Pssm-ID: 236857 [Multi-domain] Cd Length: 394 Bit Score: 44.92 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 222 TPLKANGKLYACTAHSKVLALDPDTGAEIWRFDPQIKspvgfKGFAhmtcrgvsyydennyvnADGSPApKISdAGQAVA 301
Cdd:PRK11138 64 HPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEK-----DGWF-----------------SKNKSA-LLS-GGVTVA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 302 IacpRRLYLPTADARLIALNADTGKVcegfgnqgvidlttgIGPFTAGGYYSTSPaAITRELVIIgghvtdnestNEPSG 381
Cdd:PRK11138 120 G---GKVYIGSEKGQVYALNAEDGEV---------------AWQTKVAGEALSRP-VVSDGLVLV----------HTSNG 170
|
170 180
....*....|....*....|.
gi 1567381786 382 VIRAYDVHDGRLVWNWDSNNP 402
Cdd:PRK11138 171 MLQALNESDGAVKWTVNLDVP 191
|
|
| assembly_YfgL |
TIGR03300 |
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a ... |
184-326 |
1.86e-04 |
|
outer membrane assembly lipoprotein YfgL; Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274511 [Multi-domain] Cd Length: 377 Bit Score: 44.54 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1567381786 184 SPLRQITPQnvHKLQEAWRIRTGDLPtDNDPVELTnqntPLKANGKLYACTAHSKVLALDPDTGAEIWR--FDPQIKSPV 261
Cdd:TIGR03300 29 AELPEFQPT--VKVDQVWSASVGDGV-GHYYLRLQ----PAVAGGKVYAADADGTVAALDAETGKRLWRvdLDERLSGGV 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1567381786 262 GFKGfahmtcrGVSYY-DENNYVNA----DGSPAPKISDAGQAVAIacPR----RLYLPTADARLIALNADTGK 326
Cdd:TIGR03300 102 GADG-------GLVFVgTEKGEVIAldaeDGKELWRAKLSSEVLSP--PLvangLVVVRTNDGRLTALDAATGE 166
|
|
| PQQ |
smart00564 |
beta-propeller repeat; Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline ... |
222-254 |
4.14e-04 |
|
beta-propeller repeat; Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Pssm-ID: 128836 [Multi-domain] Cd Length: 33 Bit Score: 38.28 E-value: 4.14e-04
10 20 30
....*....|....*....|....*....|...
gi 1567381786 222 TPLKANGKLYACTAHSKVLALDPDTGAEIWRFD 254
Cdd:smart00564 1 PVVLSDGTVYVGSTDGTLYALDAKTGEILWTYK 33
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
735-765 |
1.14e-03 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 37.17 E-value: 1.14e-03
10 20 30
....*....|....*....|....*....|.
gi 1567381786 735 GTLDQYLRAYDTNTGKELWKSRLPAGGQATP 765
Cdd:pfam01011 6 GSDDGYLYALDAETGKVLWSFKTGGAVLSSP 36
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
306-338 |
1.83e-03 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 36.40 E-value: 1.83e-03
10 20 30
....*....|....*....|....*....|...
gi 1567381786 306 RRLYLPTADARLIALNADTGKVCEGFGNQGVID 338
Cdd:pfam01011 1 GTVYLGSDDGYLYALDAETGKVLWSFKTGGAVL 33
|
|
| PQQ |
pfam01011 |
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller ... |
228-256 |
2.34e-03 |
|
PQQ enzyme repeat; The family represent a single repeat of a beta propeller. This propeller has been found in several enzymes which utilize pyrrolo-quinoline quinone as a prosthetic group.
Pssm-ID: 395799 [Multi-domain] Cd Length: 36 Bit Score: 36.40 E-value: 2.34e-03
10 20
....*....|....*....|....*....
gi 1567381786 228 GKLYACTAHSKVLALDPDTGAEIWRFDPQ 256
Cdd:pfam01011 1 GTVYLGSDDGYLYALDAETGKVLWSFKTG 29
|
|
| |
