|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 621.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFSDPLSSPLIILTTWLLP****** 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 81 ***********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 161 LIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 241 YGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 321 LTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1922070858 401 IITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLITGLTM 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 513.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFSDPLSSPLIILTTWLLP****** 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 81 ***********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 161 LIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 241 YGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 321 LTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1922070858 401 IITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLITG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
9.69e-170 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 484.81 E-value: 9.69e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFSDPLSSPLIILTTWLLP****** 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 81 ***********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 161 LIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 241 YGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 321 LTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1922070858 401 IITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLITGL 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.81e-150 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 435.92 E-value: 1.81e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFF-SDPLSSPLIILTTWLLP***** 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 80 ************************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 160 LLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 240 GYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 320 GLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGIN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1922070858 400 IIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLITGLT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.73e-135 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 397.00 E-value: 2.73e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 3 KIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFS-DPLSSPLIILTTWLLP******* 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 82 **********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 162 IALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKL---TTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 242 GMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 322 TSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINII 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1922070858 402 ITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.78e-119 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 356.98 E-value: 1.78e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYS---FLISLISLQLLWQNDENNLnfSILFFSDPLSSPLIILTTWLLP*** 77
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSsliSLLSLFLLNNHWSSSWHNL--SLSLATDSLSSPLIILSCWLAPLSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 78 **************************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGS 157
Cdd:MTH00044 79 LASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 158 IPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLK 237
Cdd:MTH00044 159 LPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 238 LGGYGMMR-ISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALM 316
Cdd:MTH00044 239 LGGYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 317 IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILM 396
Cdd:MTH00044 319 IAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPII 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1922070858 397 GINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLIT 455
Cdd:MTH00044 399 GLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
4.40e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 293.98 E-value: 4.40e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTWLskpKKVWTNVTSYSFLISLISLQLLWqNDENNLNFSILFFSDPLSSPLIILTTWLLp****** 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFL---KNSWWLVQSLLFLLSFLFMLLFS-LSFYFSNISYFFGLDLLSFGLILLSFWIC--MLMIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 81 ***********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPL 160
Cdd:MTH00163 75 SSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 161 LIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFFGS------LNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 241 YGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 321 LTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1922070858 401 IITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
128-457 |
4.58e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 282.50 E-value: 4.58e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKM 207
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRK---LLSSMGLWGLLVFLAFLVKL 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 288 YSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANL 367
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 368 ALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILL 447
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
330
....*....|
gi 1922070858 448 TISPKLITGL 457
Cdd:MTH00150 407 ILKSDLLFMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.58e-87 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 273.54 E-value: 3.58e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 1 MLKIIFPSLMLLPLTwLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFSDPLSSPLIILTTWLlp****** 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWI--TALMIL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 81 ***********************************************PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPL 160
Cdd:MTH00014 78 ASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 161 LIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPP---SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 241 YGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 321 LTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1922070858 401 IITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILLTISPKLIT 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
128-454 |
2.55e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 268.77 E-value: 2.55e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSltsSP*********LWLACMMAFLIKM 207
Cdd:MTH00205 123 PTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF---PLNFSDFYLFLYWIFLMLAFLVKL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:MTH00205 200 PMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 288 YSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANL 367
Cdd:MTH00205 280 YSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 368 ALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILL 447
Cdd:MTH00205 360 AAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNIL 439
|
....*..
gi 1922070858 448 TISPKLI 454
Cdd:MTH00205 440 ILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
128-458 |
1.91e-59 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 202.23 E-value: 1.91e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKM 207
Cdd:COG1008 146 PMYFLIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLL-LFLAFFIAFAVKV 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPL-TKHMAYPFILLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:COG1008 224 PMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:COG1008 304 AYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALAS 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITAtysMYMIIMTQR---GKLTSHMNNLQPSHTRELTLMSLHIMP 443
Cdd:COG1008 384 LGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTA---AYLLWMYQRvffGPLKEELAELPDLNPRELAVLAPLAAL 460
|
330
....*....|....*
gi 1922070858 444 LILLTISPKLITGLT 458
Cdd:COG1008 461 ILLLGLYPQPLLDLI 475
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
128-389 |
4.22e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 187.91 E-value: 4.22e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKM 207
Cdd:pfam00361 17 PSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGLLLLFLLILVGFLFKS 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:pfam00361 97 AQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALVQTDIKRLLA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 288 YSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANS-NYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:pfam00361 177 YSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSL 256
|
250 260
....*....|....*....|...
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWS 389
Cdd:pfam00361 257 AGLPPTAGFLGKFLILAAAVAAS 279
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
128-455 |
3.92e-54 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 188.49 E-value: 3.92e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGnQTERLNAGLYFLFYTLIGSIPLLIALISI----QNSIGTLNFLILSLTSSP*********LWLACMMAF 203
Cdd:PRK05846 146 PMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGVQYW---LFLAFFIAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 204 LIKMPLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFIL-LSLWGMIMTSSICLRQTDL 282
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDI 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 283 KSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMA 362
Cdd:PRK05846 302 KKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFF 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 363 SLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIM 442
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVA 461
|
330
....*....|...
gi 1922070858 443 PLILLTISPKLIT 455
Cdd:PRK05846 462 LLLLLGVYPKPLL 474
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
128-410 |
2.45e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 183.33 E-value: 2.45e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSltsSP*********LWLACMMAFLIKM 207
Cdd:MTH00217 144 PMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKELQYFIFLGFFLSLAIKI 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFIL-LSLWGMIMTSSICLRQTDLKSLI 286
Cdd:MTH00217 221 PKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRII 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:MTH00217 301 AYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYM 410
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
128-458 |
1.02e-51 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 181.68 E-value: 1.02e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTeRLNAGLYFLFYTLIGSIPLLIALISIQnSIGTLNFLILSLTSSP*********LWLACMMAFLIKM 207
Cdd:TIGR01972 141 PMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLELLNLPLPFGVQTW-LFLAFFIAFAVKV 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP-LTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:TIGR01972 218 PLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLI 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:TIGR01972 298 AYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLT-SHMNNLQPSHTRELTLMSLHIMPLI 445
Cdd:TIGR01972 378 LGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLIL 457
|
330
....*....|...
gi 1922070858 446 LLTISPKLITGLT 458
Cdd:TIGR01972 458 FLGLYPNPLLDLT 470
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
128-454 |
2.20e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 180.64 E-value: 2.20e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKM 207
Cdd:MTH00204 147 PMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKW---LLVGFFLSLAVKI 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFI-LLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:MTH00204 224 PQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIvMLSVIAVIYGSLTTCRQVDFKRLI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:MTH00204 304 AYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLIL 446
Cdd:MTH00204 384 MGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFL 463
|
....*...
gi 1922070858 447 LTISPKLI 454
Cdd:MTH00204 464 LGIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
128-454 |
7.12e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 179.73 E-value: 7.12e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSlTSSP*********LWLACMMAFLIKM 207
Cdd:MTH00226 166 PMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLA-SCSHVVSEQTQKWIFLGIFLAMAVKI 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPL-TKHMAYPFILLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:MTH00226 245 PIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLV 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:MTH00226 325 AYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLAN 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLIL 446
Cdd:MTH00226 405 VAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFL 484
|
....*...
gi 1922070858 447 LTISPKLI 454
Cdd:MTH00226 485 IGIYPIFI 492
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
128-447 |
4.75e-35 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 134.65 E-value: 4.75e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALIsiqnsigtLNFLILSLTSSp*********LWLACMMAFLIKM 207
Cdd:MTH00094 97 PILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF---DFFLSWEMFFILSLSFMMKF 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLtkhMAYPFILLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:MTH00094 166 PVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSKSLAA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 288 YSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANL 367
Cdd:MTH00094 243 YSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 368 ALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQPSHTRELTLMSLHIMPLILL 447
Cdd:MTH00094 323 GVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
137-387 |
6.15e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 120.64 E-value: 6.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 137 GNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLtSSP*********LWLACMMAFLIKMPLYG****L 216
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAA-RLAELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 217 PKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDP--LTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 295 ALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSIN 374
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
250
....*....|...
gi 1922070858 375 LVGELFIVMSLFS 387
Cdd:COG0651 389 FVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
128-392 |
6.53e-30 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 121.68 E-value: 6.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKM 207
Cdd:PRK12561 122 PVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAK-SYPLALELLLYAGFLIAFGVKL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTK-HMAYPFILLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHvYFAPALAILGVVNIIYGALNAFAQDNVKRRL 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMAS 359
|
250 260
....*....|....*....|....*.
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFS 392
Cdd:PRK12561 360 LALPGMSGFVSELTVFLGITSSDVYS 385
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
128-428 |
1.53e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.02 E-value: 1.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKM 207
Cdd:PRK06473 142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSH-TLPLSTQLLLLAPILVGFGIKI 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFilLSLWGMIMT---SSICLRQTDLKS 284
Cdd:PRK06473 220 PLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 285 LIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGL---QMIFPLMTTWWLM 361
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMIL 377
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1922070858 362 ASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSHMNNLQP 428
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
128-392 |
3.00e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.11 E-value: 3.00e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQ---NSIGTLNFLILSLTSSP*********LWLACMMAFL 204
Cdd:CHL00011 147 PVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSYPVALEIL---FYIGFLIAYA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 205 IKMPLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPF-ILLSLWGMIMTSSICLRQTDLK 283
Cdd:CHL00011 223 VKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLK 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 284 SLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIhsRTMIMAR--GLQMIFPLMTTWWLM 361
Cdd:CHL00011 303 KRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSS 380
|
250 260 270
....*....|....*....|....*....|.
gi 1922070858 362 ASLANLALPPSINLVGELFIVMSLFSWSNFS 392
Cdd:CHL00011 381 FSMASLALPGMSGFVAELIVFFGIITSQKYL 411
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
128-455 |
1.56e-24 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 106.33 E-value: 1.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLtSSP*********LWLACMMAFLIKM 207
Cdd:PRK02546 150 PVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAL-AAKDFGLGFQLLCYAGLLIAYGVKL 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYP-FILLSLWGMIMTSSICLRQTDLKSLI 286
Cdd:PRK02546 228 PIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKI 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 287 AYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLAN 366
Cdd:PRK02546 308 AYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLAS 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 367 LALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITAT----YSMYMIIM-------TQRGKLTSHmNNLQPSHTRELT 435
Cdd:PRK02546 388 LALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVgvilTPIYLLSMlreiffgPENKELVSH-EKLVDAEPREVF 466
|
330 340
....*....|....*....|
gi 1922070858 436 LMSLHIMPLILLTISPKLIT 455
Cdd:PRK02546 467 IIACLLVPIIGIGLYPKLVT 486
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
128-422 |
9.25e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.70 E-value: 9.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 128 PTLIIITRWGNQtERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LwLACMMAFLIKM 207
Cdd:PRK07363 142 PFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL-TGLLLGFGIKI 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 208 PLYG****LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPfiLLSLWGMIMT---SSICLRQTDLKS 284
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKR 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 285 LIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMI---FPLMTTWWLM 361
Cdd:PRK07363 298 MVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVL 377
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1922070858 362 ASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINIIITATYSMYMIIMTQRGKLTSH 422
Cdd:PRK07363 378 AGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-387 |
1.62e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 87.63 E-value: 1.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 141 ERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LwlaCMMAFLIKMPLYG****LPKAH 220
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGF---VLLALALKAAVFPLHTWLPRAY 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 221 VEAPIAGSMILAAILLKLGGYGMMRISI----ILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 297 VIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLV 376
Cdd:PRK08375 310 ILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
250
....*....|.
gi 1922070858 377 GELFIVMSLFS 387
Cdd:PRK08375 390 SKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-387 |
2.78e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 87.33 E-value: 2.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 141 ERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSL---------TSSP*********LWLACMM-AFLIKMPLY 210
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfplTGGLAGNPPLALGVALALALwAFTIKAAIF 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 211 G****LPKAHVEAPIAGSMILAAILLKLGGYGMMRI-------SIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLK 283
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVK 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 284 SLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMAS 363
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGA 400
|
250 260
....*....|....*....|....
gi 1922070858 364 LANLALPPSINLVGELFIVMSLFS 387
Cdd:PRK12667 401 LSLVGIPPLNGFFSKLLLFNALLE 424
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
216-387 |
9.23e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 76.12 E-value: 9.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPlTKHMAYPFILLSLWGM--IMTSSICL-RQTDLKSLIAYSSVS 292
Cdd:PRK06458 237 LPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDA-AIGSDFPGRLLLIFGLlsVLVAAFFLlRQRDIKRLFAYSSIE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 293 HMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPS 372
Cdd:PRK06458 316 HMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPF 395
|
170
....*....|....*
gi 1922070858 373 INLVGELFIVMSLFS 387
Cdd:PRK06458 396 GVFISEFLILTAGLA 410
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
145-386 |
6.78e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 61.29 E-value: 6.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 145 AGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLIKMPLYG****LPKAHVEAP 224
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAG------ILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASP 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 225 IAGSMILAAILLKLGGYGMMRIsiILDPLTKHMAYPFILLSLwGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIASV 301
Cdd:PRK08667 237 SNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 302 MIQTPWSFMGATALM-----------IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALP 370
Cdd:PRK08667 314 GLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALP 393
|
250
....*....|....*.
gi 1922070858 371 PSINLVGELFIVMSLF 386
Cdd:PRK08667 394 PFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
150-389 |
5.63e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.23 E-value: 5.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 150 LFYTLIGSIPLLIALISI---------QNSIGTLNFLILSlTSSP*********LWLACMMAFLIKMPLYG****LPKAH 220
Cdd:PRK08676 155 LKYIFIASTAMIFAFIGLiflfsltrqALGTGTLNWTELA-AHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAY 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 221 VEAPIAGSMILAAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLwGMIMTSSIC---LRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK08676 234 AKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLM 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 298 IASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVG 377
Cdd:PRK08676 313 LLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLS 392
|
250
....*....|..
gi 1922070858 378 ELFIVMSLFSWS 389
Cdd:PRK08676 393 KFFILLQLGGIS 404
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-74 |
1.11e-08 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 52.91 E-value: 1.11e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1922070858 1 MLKIIFPSLMLLPLTWLSKPKKVWTNVTSYSFLISLISLQLLWQNDENNLNFSILFFS-DPLSSPLIILTTWLLP 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLP 75
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-387 |
2.82e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 56.05 E-value: 2.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 145 AGLYFLFYTLIGSIPLLIALISIQNSIGTLNFL-ILSLTSSP*********lwLACMMAFL---IK---MPLYG****LP 217
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDFAaMRAAHLSPFWAS-------LVFLLALFgfgAKaglVPLHVW---LP 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 218 KAHVEAPIAGSMILAAILLKLGGYGMMRISI-ILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK06521 235 RAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGI 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 297 VIASV---MI-----QTPWSFMGATALM---IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLA 365
Cdd:PRK06521 315 IFVGLglaMVfiaygMPLLAALALTAALyhlLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLA 394
|
250 260
....*....|....*....|..
gi 1922070858 366 NLALPPSINLVGELFIVMSLFS 387
Cdd:PRK06521 395 ISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-387 |
3.45e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 55.54 E-value: 3.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 155 IGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLaCMMAFLIKMPLYG****LPKAHVEAPIAGSMILAAI 234
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLAL-LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAF 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 235 LLKLGGYGMMRISIILDPLT--KHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGA 312
Cdd:PRK08377 248 VVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAG 327
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1922070858 313 TALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFS 387
Cdd:PRK08377 328 VFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
139-390 |
5.86e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 54.82 E-value: 5.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 139 QTERLNAGLYFLFYTLIGSIPL-LIALISIQNSIGTLNFLILSLTSSP*********LWLacmmafLIKMPLYG****LP 217
Cdd:PRK06589 161 NNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG------IAKTAIFPVHSWLP 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 218 KAHVEAPIAGSMILAAILLKLGGYGMMRISII---LDPLTK--HMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK06589 235 AAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTIS 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 293 HMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPS 372
Cdd:PRK06589 315 QLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIF 394
|
250
....*....|....*...
gi 1922070858 373 INLVGELFIVMSLFSWSN 390
Cdd:PRK06589 395 SGFISKFLILLAASEQNQ 412
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
141-387 |
8.33e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 54.16 E-value: 8.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 141 ERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMaFLIKMPLYG****LPKAH 220
Cdd:MTH00062 119 ERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDS-----VSLIVYYVLSFM-FITKVPLFPFHTWLPIVH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 221 VEAPIAGSMILAAILLKLGGYGMMRI-SIILDPLTKHMAYPFILLSLWGMIMTSSIClrqtDLKSLIAYSSVSHMalVIA 299
Cdd:MTH00062 193 AEASSPVSIFLSGYIMKLGLLGVYRFcGFIFSGSFLGYLFLCCLFSVFFLITACSEL----DGKRWLAFLSLSHI--LVP 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 300 SVMIQTPWSFMGATALM--IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVG 377
Cdd:MTH00062 267 VLGLFVGDWSSINLSFFycLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFC 346
|
250
....*....|
gi 1922070858 378 ELFIVMSLFS 387
Cdd:MTH00062 347 EVFLVSSSFG 356
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
137-327 |
1.19e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 54.23 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 137 GNQTERLNAGLYFLFyTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****L 216
Cdd:PRK08668 141 GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 217 PKAHVEAPIAGSMILAAILLKLGGYGMMRISIILdPLTK------------HMAYPFILLSLWGMIMTSSICLRQTDLKS 284
Cdd:PRK08668 220 PDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKK 298
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1922070858 285 LIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLF 327
Cdd:PRK08668 299 LIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
216-330 |
1.41e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.89 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIIL-DPLTKHmaypfILLSLWGM---IMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12650 231 LPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAVWN-----WLLIIVGMitaLMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110
....*....|....*....|....*....|....*....
gi 1922070858 292 SHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLA 330
Cdd:PRK12650 306 SQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
216-385 |
2.81e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.00 E-value: 2.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 216 LPKAhVEAPIAGSMIL-AAILLKLGGYGMMRisiiLDPLTKHMAYPFILLSLWG---MIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12647 218 LPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 292 SHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPP 371
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170
....*....|....
gi 1922070858 372 SINLVGELFIVMSL 385
Cdd:PRK12647 373 LFGFLAKELIYEAL 386
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
141-390 |
4.94e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 51.90 E-value: 4.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 141 ERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAflIKMPLYg****LPKAh 220
Cdd:PRK06525 160 KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS--AQLPFY---SWLPDA- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 221 VEAPIAGSMIL-AAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSH---MAL 296
Cdd:PRK06525 234 MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQlgyMFF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 297 VIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLV 376
Cdd:PRK06525 314 GLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFF 393
|
250
....*....|....
gi 1922070858 377 GELFIVMSLFSWSN 390
Cdd:PRK06525 394 SKFPIFAAGFELSV 407
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-386 |
8.97e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 51.25 E-value: 8.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 141 ERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLN--FLILSLTSSP*********LWLAcmmAFLIKMPLYG****LPK 218
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNmaYLAVKMSENPTVVAKIALALFIA---GLAMKSGAVPVHMWLPD 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 219 AHVEAPIAGSMILAAIllKLGG-YGMMRISIILDPLTKHMA---YPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK08376 246 AYPAAPSSISAMLLVI--KQAGlYALARVLFSIYGPAINLAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 295 ALVIASVMI------QTPWSFMGATAL------MIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMA 362
Cdd:PRK08376 324 GYMLLGLGVglaalgDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIG 403
|
250 260
....*....|....*....|....
gi 1922070858 363 SLANLALPPSINLVGELFIVMSLF 386
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
145-339 |
1.66e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 50.34 E-value: 1.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 145 AGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSlTSSP*********lwlacmMAFLIKMPLYG****LPKAHVEAP 224
Cdd:PRK07234 145 VGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLA-TADPEAFALIA--------LGLLVKGGIFVSGLWLPLTHSEAE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 225 IAGSMILAAILLKLGGYGMMRISIILDPLtkhmAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIq 304
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGL----DLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV- 290
|
170 180 190
....*....|....*....|....*....|....*
gi 1922070858 305 tpwsfmgATALMIAHGLTSSLLFCLANSNYERIHS 339
Cdd:PRK07234 291 -------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-384 |
5.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 5.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 137 GNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMPLYG****L 216
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 217 PKAHVEAPIAGSMILAAILLKLGGYGMMRI-----SIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfKANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 292 SHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPP 371
Cdd:PRK12662 313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
250
....*....|...
gi 1922070858 372 SINLVGELFIVMS 384
Cdd:PRK12662 393 TSGFVAKWYILDA 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
1.56e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.13 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 155 IGSIPLLIALISIQNSIGTLNFLILSLTSSp*********LWLACMMAFLI---KMPLYG****LPKAHVEAPIAGSMIL 231
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQ---QLPLGSDIWLLGVIGFGLlagIIPLHGW---VPQAHANASAPAAALF 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 232 AAILLKLGGYGMMRISIILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV-------IASVMIQ 304
Cdd:PRK08042 219 STVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALE 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 305 TP----WSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLMTTWWLMASLANLALPPSINLVGELF 380
Cdd:PRK08042 299 QPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWV 378
|
250
....*....|
gi 1922070858 381 IVMSLFSWSN 390
Cdd:PRK08042 379 IYQSFFKLSN 388
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
269-449 |
2.40e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 46.68 E-value: 2.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 269 MIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQtpwSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGL 348
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 349 QMIFPLMTTWWLMASLANLALPPSINLVGELFIVMSLFSWSNFSIILMGINI---IITATYSMYMIIMTQRGKLTSHmnn 425
Cdd:COG1009 363 RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALlgaFLTAFYSFRLFFLVFFGKPRPK--- 439
|
170 180
....*....|....*....|....
gi 1922070858 426 lQPSHTRELTLmsLHIMPLILLTI 449
Cdd:COG1009 440 -TPKHPHESPW--LMTLPLVVLAV 460
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-377 |
4.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.73 E-value: 4.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 137 GNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNF--LILSLTSSP*********LWLACMMAFLIKMPLYG*** 214
Cdd:PRK12665 154 GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDELPSGTRTA---LFAVLLVAFGIKAAVFPLSF 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 215 *LPKAHVEAPIAGSMILAAILLKLGGYGMMRISIILDPlTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12665 231 WLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHI 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 295 ALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFPLmttwwlmasLANLALPPSIN 374
Cdd:PRK12665 310 GYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPL---------LAVLFFVPALN 380
|
...
gi 1922070858 375 LVG 377
Cdd:PRK12665 381 LGG 383
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
1.39e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.12 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 136 WGNQTER-LNAGL-YFLFYTLIGSIpLLIALISIQNSIGTLNF-LILSLTSSP*********lWLAcMMAFLIKMPLYG* 212
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFgAIAGLGGTAA---------WLI-LIGFGVNAAFPPL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 213 ***LPKAHVEAPIAGSMILAAILLKLGGYGMMRisiildpltkhmAYP-FILLSLWGMIMT---SSICLRQTDLKSLIAY 288
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------------AFPgTELLIYIGAAMAvygVFFALLENDLRRLLSY 270
|
170 180 190
....*....|....*....|....*....|....*....
gi 1922070858 289 SSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLF 327
Cdd:PRK12668 271 HIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
262-327 |
5.78e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 42.60 E-value: 5.78e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1922070858 262 ILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLF 327
Cdd:PRK12644 271 LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
129-370 |
4.09e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 129 TLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIALISIQNSIGTLNFLILSLTSSP*********LWLACMMAFLIKMP 208
Cdd:PRK12646 146 SFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSA 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 209 LYG****LPKAhVEAPIAGSMIL-AAILLKLGGYGMMRISIILDpLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIA 287
Cdd:PRK12646 226 QFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 288 YSSVSHMALVIASVMI-----QTPWSFMGATALMIA---------HGLTSSLLFCLANSNYERIHSRTMIMARGLQMIFP 353
Cdd:PRK12646 304 YSTISQLGMIMAMVGIgggyaQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFP 383
|
250
....*....|....*..
gi 1922070858 354 LMTTWWLMASLANLALP 370
Cdd:PRK12646 384 KMNLVMTIAALSMAGVP 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
5.00e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.24 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 262 ILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 1922070858 342 MIMARGLQMIFPLMTTWWLMASLANLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
237-323 |
6.19e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 39.03 E-value: 6.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1922070858 237 KLGGYGM-MRIS-IILDPLTKHMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASVMIQTPWSFMGATA 314
Cdd:PRK05777 247 KIAAFAVlLRLLvVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLF 326
|
....*....
gi 1922070858 315 LMIAHGLTS 323
Cdd:PRK05777 327 YLLAYLFMT 335
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