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Conserved domains on  [gi|1897898012|gb|QNM80624|]
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autoinducer synthesis protein PhzA2, partial [Pseudomonas aeruginosa]

Protein Classification

phenazine biosynthesis protein( domain architecture ID 10505537)

phenazine biosynthesis protein is involved in the biosynthesis of the antibiotic phenazine, a nitrogen-containing heterocyclic molecule having important roles in virulence, competition and biological control

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHZA_PHZB pfam03284
Phenazine biosynthesis protein A/B;
2-158 3.09e-108

Phenazine biosynthesis protein A/B;


:

Pssm-ID: 397400  Cd Length: 161  Bit Score: 304.89  E-value: 3.09e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1897898012   2 REYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDW 81
Cdd:pfam03284   1 REYQRLKGFHDHAELRRHNRKTVEQYMHTKGEARLKRHLLFVEDGCGGLWTTDSGQPIVIRGREKLGEHAVWSLQCFPDW 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1897898012  82 EWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRD 158
Cdd:pfam03284  81 EWTNIQIFETQDPNHFWVECDGEGKILFPGYPQGYYENHFLHSFELENGLIKRNREFMNPCQQLRALGIEVPQIKRD 157
 
Name Accession Description Interval E-value
PHZA_PHZB pfam03284
Phenazine biosynthesis protein A/B;
2-158 3.09e-108

Phenazine biosynthesis protein A/B;


Pssm-ID: 397400  Cd Length: 161  Bit Score: 304.89  E-value: 3.09e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1897898012   2 REYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDW 81
Cdd:pfam03284   1 REYQRLKGFHDHAELRRHNRKTVEQYMHTKGEARLKRHLLFVEDGCGGLWTTDSGQPIVIRGREKLGEHAVWSLQCFPDW 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1897898012  82 EWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRD 158
Cdd:pfam03284  81 EWTNIQIFETQDPNHFWVECDGEGKILFPGYPQGYYENHFLHSFELENGLIKRNREFMNPCQQLRALGIEVPQIKRD 157
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
19-149 3.23e-13

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 62.25  E-value: 3.23e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1897898012  19 RNRATVEHYMrmkgaERLQRH------SLFVEDGCagnWTTESGEPL-VFRGHESLRRLAEWLERCFPDWEWHNVRIFEt 91
Cdd:COG3631     1 TNRELVRRFY-----AAFNAGdvdallALLAEDVV---WEDPGGPGAgTYRGKEAVRAFFARLAAAFEDLRFEVRRVVA- 71

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1897898012  92 eDPNHFWVECDGRGKALVPGYPqgyCENHYIHSFELENGRIKRNREFMNPMQKLRALG 149
Cdd:COG3631    72 -DGDRVVVEGTVRGTVLATGKP---YENRYADVFTVRDGKIVRVREYFDTAALAAALG 125
 
Name Accession Description Interval E-value
PHZA_PHZB pfam03284
Phenazine biosynthesis protein A/B;
2-158 3.09e-108

Phenazine biosynthesis protein A/B;


Pssm-ID: 397400  Cd Length: 161  Bit Score: 304.89  E-value: 3.09e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1897898012   2 REYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDW 81
Cdd:pfam03284   1 REYQRLKGFHDHAELRRHNRKTVEQYMHTKGEARLKRHLLFVEDGCGGLWTTDSGQPIVIRGREKLGEHAVWSLQCFPDW 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1897898012  82 EWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRD 158
Cdd:pfam03284  81 EWTNIQIFETQDPNHFWVECDGEGKILFPGYPQGYYENHFLHSFELENGLIKRNREFMNPCQQLRALGIEVPQIKRD 157
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
19-149 3.23e-13

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 62.25  E-value: 3.23e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1897898012  19 RNRATVEHYMrmkgaERLQRH------SLFVEDGCagnWTTESGEPL-VFRGHESLRRLAEWLERCFPDWEWHNVRIFEt 91
Cdd:COG3631     1 TNRELVRRFY-----AAFNAGdvdallALLAEDVV---WEDPGGPGAgTYRGKEAVRAFFARLAAAFEDLRFEVRRVVA- 71

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1897898012  92 eDPNHFWVECDGRGKALVPGYPqgyCENHYIHSFELENGRIKRNREFMNPMQKLRALG 149
Cdd:COG3631    72 -DGDRVVVEGTVRGTVLATGKP---YENRYADVFTVRDGKIVRVREYFDTAALAAALG 125
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 61-133 7.94e-04

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 36.88  E-value: 7.94e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1897898012  61 FRGHESLRRLAEWLERCFPDWEWHNVRIFetEDPNHFWVEcdGRGKALVPGYPQGYcENHYIHSFELENGRIK 133
Cdd:pfam12680  33 LRGRDAIRAFFAALFAAFPDLRFEIHDVI--ADGDRVAVR--WTVTGTIPPTGRGV-RVRGVDVFRFRDGKIV 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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