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Conserved domains on  [gi|1830048193|gb|QIY30984|]
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stage V sporulation protein SpoVM [Bacillus anthracis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SpoVM COG5844
Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle ...
 1-26 8.31e-10

Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444546  Cd Length: 26  Bit Score: 46.02  E-value: 8.31e-10
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:COG5844    1 MRFYTIKLPRFLGGIVRAILGAFKKD 26
 
Name Accession Description Interval E-value
SpoVM COG5844
Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle ...
 1-26 8.31e-10

Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444546  Cd Length: 26  Bit Score: 46.02  E-value: 8.31e-10
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:COG5844    1 MRFYTIKLPRFLGGIVRAILGAFKKD 26
SpoVM_broad NF033436
stage V sporulation protein SpoVM; Members of this family are SpoVM (stage V sporulation ...
 1-26 5.60e-07

stage V sporulation protein SpoVM; Members of this family are SpoVM (stage V sporulation protein M).


Pssm-ID: 380278  Cd Length: 26  Bit Score: 39.02  E-value: 5.60e-07
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:NF033436   1 MKFYTIKLPKFLSGIVRAILGIKKKE 26
spoVM PRK14741
stage V sporulation protein SpoVM;
1-26 5.78e-07

stage V sporulation protein SpoVM;


Pssm-ID: 173202  Cd Length: 26  Bit Score: 39.06  E-value: 5.78e-07
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:PRK14741   1 MKFYTIKLPKFLGGIVRAMLGSFKKG 26
SpoV pfam08183
Stage V sporulation protein family; This family consists of the stage V sporulation (SpoV) ...
 1-25 5.62e-06

Stage V sporulation protein family; This family consists of the stage V sporulation (SpoV) proteins of Bacillus subtilis which includes SpoVM. SpoVM is an small, 26 residue-long protein that is produced in the mother cell chamber of the sporangium during the process of sporulation in B. subtilis. SpoVM forms an amphipathic alpha-helix and is recruited to the polar septum shortly after the sporangium undergoes asymmetric division. The function of SpoVM depends on proper subcellular localization.


Pssm-ID: 369736  Cd Length: 25  Bit Score: 36.65  E-value: 5.62e-06
                         10        20
                 ....*....|....*....|....*
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKK 25
Cdd:pfam08183  1 MKFYTIKLPKFLGGIVRAILGSFKK 25
 
Name Accession Description Interval E-value
SpoVM COG5844
Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle ...
 1-26 8.31e-10

Stage V sporulation protein SpoVM, required for spore cortex and coat synthesis [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444546  Cd Length: 26  Bit Score: 46.02  E-value: 8.31e-10
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:COG5844    1 MRFYTIKLPRFLGGIVRAILGAFKKD 26
SpoVM_broad NF033436
stage V sporulation protein SpoVM; Members of this family are SpoVM (stage V sporulation ...
 1-26 5.60e-07

stage V sporulation protein SpoVM; Members of this family are SpoVM (stage V sporulation protein M).


Pssm-ID: 380278  Cd Length: 26  Bit Score: 39.02  E-value: 5.60e-07
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:NF033436   1 MKFYTIKLPKFLSGIVRAILGIKKKE 26
spoVM PRK14741
stage V sporulation protein SpoVM;
1-26 5.78e-07

stage V sporulation protein SpoVM;


Pssm-ID: 173202  Cd Length: 26  Bit Score: 39.06  E-value: 5.78e-07
                         10        20
                 ....*....|....*....|....*.
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKKD 26
Cdd:PRK14741   1 MKFYTIKLPKFLGGIVRAMLGSFKKG 26
SpoV pfam08183
Stage V sporulation protein family; This family consists of the stage V sporulation (SpoV) ...
 1-25 5.62e-06

Stage V sporulation protein family; This family consists of the stage V sporulation (SpoV) proteins of Bacillus subtilis which includes SpoVM. SpoVM is an small, 26 residue-long protein that is produced in the mother cell chamber of the sporangium during the process of sporulation in B. subtilis. SpoVM forms an amphipathic alpha-helix and is recruited to the polar septum shortly after the sporangium undergoes asymmetric division. The function of SpoVM depends on proper subcellular localization.


Pssm-ID: 369736  Cd Length: 25  Bit Score: 36.65  E-value: 5.62e-06
                         10        20
                 ....*....|....*....|....*
gi 1830048193  1 MRFYTIKLPKFLGGIVRAMLNTFKK 25
Cdd:pfam08183  1 MKFYTIKLPKFLGGIVRAILGSFKK 25
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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