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Conserved domains on  [gi|1828980358|gb|QIU95195|]
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DUF3945 domain-containing protein [Bacteroides faecium]

Protein Classification

DUF3945 domain-containing protein( domain architecture ID 10595322)

DUF3945 domain-containing protein with a DUF4099 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4099 pfam13351
Protein of unknown function (DUF4099); A family of uncharacterized proteins found by ...
 162-242 8.23e-27

Protein of unknown function (DUF4099); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. The C-terminal repeat region of this family is DUF4098, pfam13345.


:

Pssm-ID: 433137  Cd Length: 80  Bit Score: 103.40  E-value: 8.23e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1828980358 162 DPDKVDWEALKNFGLSKEQLEKSKALEPMLRGYKSPgAFTIAGNYNSAIMKLDARLSFRHDKDGNVVLAIHGIRQKPELE 241
Cdd:pfam13351   1 DEEDIDWKDLEKLGISKEQLEKSGLLDALLNGYKTP-LVPVSIEFGGEVISLDARLSLVPGDDGNVVLMIHPIRKEPQLD 79


                  .
gi 1828980358 242 R 242
Cdd:pfam13351  80 R 80
DUF3945 pfam13101
Protein of unknown function (DUF3945); A family of uncharacterized proteins found by ...
 276-334 2.05e-22

Protein of unknown function (DUF3945); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This is a C-terminal repeated region.


:

Pssm-ID: 463786  Cd Length: 59  Bit Score: 90.36  E-value: 2.05e-22
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1828980358 276 EMIPSFVSVDKVTNELVSMRASSVQIPDEIKGVKLNKEQQQALREGKGVFLENMISNRK 334
Cdd:pfam13101   1 EEFPSFVSIDKLTNELVAMRVEKIKIPDEIKGVKLTEQQKQDLREGKPVLLEGMISRKG 59
 
Name Accession Description Interval E-value
DUF4099 pfam13351
Protein of unknown function (DUF4099); A family of uncharacterized proteins found by ...
 162-242 8.23e-27

Protein of unknown function (DUF4099); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. The C-terminal repeat region of this family is DUF4098, pfam13345.


Pssm-ID: 433137  Cd Length: 80  Bit Score: 103.40  E-value: 8.23e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1828980358 162 DPDKVDWEALKNFGLSKEQLEKSKALEPMLRGYKSPgAFTIAGNYNSAIMKLDARLSFRHDKDGNVVLAIHGIRQKPELE 241
Cdd:pfam13351   1 DEEDIDWKDLEKLGISKEQLEKSGLLDALLNGYKTP-LVPVSIEFGGEVISLDARLSLVPGDDGNVVLMIHPIRKEPQLD 79


                  .
gi 1828980358 242 R 242
Cdd:pfam13351  80 R 80
DUF3945 pfam13101
Protein of unknown function (DUF3945); A family of uncharacterized proteins found by ...
 276-334 2.05e-22

Protein of unknown function (DUF3945); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This is a C-terminal repeated region.


Pssm-ID: 463786  Cd Length: 59  Bit Score: 90.36  E-value: 2.05e-22
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1828980358 276 EMIPSFVSVDKVTNELVSMRASSVQIPDEIKGVKLNKEQQQALREGKGVFLENMISNRK 334
Cdd:pfam13101   1 EEFPSFVSIDKLTNELVAMRVEKIKIPDEIKGVKLTEQQKQDLREGKPVLLEGMISRKG 59
 
Name Accession Description Interval E-value
DUF4099 pfam13351
Protein of unknown function (DUF4099); A family of uncharacterized proteins found by ...
 162-242 8.23e-27

Protein of unknown function (DUF4099); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. The C-terminal repeat region of this family is DUF4098, pfam13345.


Pssm-ID: 433137  Cd Length: 80  Bit Score: 103.40  E-value: 8.23e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1828980358 162 DPDKVDWEALKNFGLSKEQLEKSKALEPMLRGYKSPgAFTIAGNYNSAIMKLDARLSFRHDKDGNVVLAIHGIRQKPELE 241
Cdd:pfam13351   1 DEEDIDWKDLEKLGISKEQLEKSGLLDALLNGYKTP-LVPVSIEFGGEVISLDARLSLVPGDDGNVVLMIHPIRKEPQLD 79


                  .
gi 1828980358 242 R 242
Cdd:pfam13351  80 R 80
DUF3945 pfam13101
Protein of unknown function (DUF3945); A family of uncharacterized proteins found by ...
 276-334 2.05e-22

Protein of unknown function (DUF3945); A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This is a C-terminal repeated region.


Pssm-ID: 463786  Cd Length: 59  Bit Score: 90.36  E-value: 2.05e-22
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1828980358 276 EMIPSFVSVDKVTNELVSMRASSVQIPDEIKGVKLNKEQQQALREGKGVFLENMISNRK 334
Cdd:pfam13101   1 EEFPSFVSIDKLTNELVAMRVEKIKIPDEIKGVKLTEQQKQDLREGKPVLLEGMISRKG 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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