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preprotein translocase subunit SecY [Flagellimonas oceani]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-439
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 564.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 4 FIE T IS N IW KI D ELR Q RI IL TLG L L L VYR F G AQVVL PGID T A Q LA E L ST Q TEN G I LG I LN A F T GGA FANA S V FALGIMPY 83
Cdd:COG0201 1 MLS T LK N AF KI P ELR K RI LF TLG I L I VYR L G SHIPV PGID P A A LA Q L FA Q QSG G L LG L LN M F S GGA LSRF S I FALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 84 I S ASI VV QL MGIA IP Y L QK LQKEGE S GRK T I N Q I TR W LT IGICIV QA PAYLY GL GA l G V P DSAF V LGK G LD F IVPA VI I L 163
Cdd:COG0201 81 I T ASI IM QL LTVV IP K L EE LQKEGE E GRK K I T Q Y TR Y LT VVLALL QA FGIAL GL RS - G P P GGGL V IDP G IL F YLLT VI T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 164 VT G CV F A MWLGE K IT DK GIGNGISL L I MV GI I A T LP Q A F AQ E F VSRT T n NTGG I MFM L IEVIVWFL VI LAS V YLTM A V R Q 243
Cdd:COG0201 160 TA G TM F L MWLGE Q IT ER GIGNGISL I I FA GI V A R LP S A L AQ I F ELVR T - GELS I LLL L LLLVLALA VI AFV V FVEQ A Q R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 244 IPVQYA R R TASG gye KNVM G ARQ Y I PLK L N AS GV M PIIFA QAIMFA P SL I GRT F NDTAA - G QW MEVQFA d IFGLA Y NI L F 322
Cdd:COG0201 239 IPVQYA K R VVGR --- RMYG G QST Y L PLK V N MA GV I PIIFA SSLLLF P AT I AQF F GGSSG w L QW IANYLS - PGSPL Y IV L Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 323 A V LII I FTYFYTAIT VPTNKM AD D LK R SGGFIPGIRPGK E T GN YLDK IMSLI TL P G S IFLAL L A V LP AVVVKLMD V Q agw 402
Cdd:COG0201 315 A L LII F FTYFYTAIT FNPEEI AD N LK K SGGFIPGIRPGK P T AE YLDK VLTRL TL V G A IFLAL I A I LP EILGAITG V P --- 391
410 420 430
....*....|....*....|....*....|....*..
gi 1819723109 403 a LFY GGTSLLI M VGVA I DT VQ Q VN S Y LL N RHY D G LM K 439
Cdd:COG0201 392 - FYF GGTSLLI V VGVA L DT MK Q IE S Q LL M RHY E G FL K 427
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-439
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 564.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 4 FIE T IS N IW KI D ELR Q RI IL TLG L L L VYR F G AQVVL PGID T A Q LA E L ST Q TEN G I LG I LN A F T GGA FANA S V FALGIMPY 83
Cdd:COG0201 1 MLS T LK N AF KI P ELR K RI LF TLG I L I VYR L G SHIPV PGID P A A LA Q L FA Q QSG G L LG L LN M F S GGA LSRF S I FALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 84 I S ASI VV QL MGIA IP Y L QK LQKEGE S GRK T I N Q I TR W LT IGICIV QA PAYLY GL GA l G V P DSAF V LGK G LD F IVPA VI I L 163
Cdd:COG0201 81 I T ASI IM QL LTVV IP K L EE LQKEGE E GRK K I T Q Y TR Y LT VVLALL QA FGIAL GL RS - G P P GGGL V IDP G IL F YLLT VI T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 164 VT G CV F A MWLGE K IT DK GIGNGISL L I MV GI I A T LP Q A F AQ E F VSRT T n NTGG I MFM L IEVIVWFL VI LAS V YLTM A V R Q 243
Cdd:COG0201 160 TA G TM F L MWLGE Q IT ER GIGNGISL I I FA GI V A R LP S A L AQ I F ELVR T - GELS I LLL L LLLVLALA VI AFV V FVEQ A Q R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 244 IPVQYA R R TASG gye KNVM G ARQ Y I PLK L N AS GV M PIIFA QAIMFA P SL I GRT F NDTAA - G QW MEVQFA d IFGLA Y NI L F 322
Cdd:COG0201 239 IPVQYA K R VVGR --- RMYG G QST Y L PLK V N MA GV I PIIFA SSLLLF P AT I AQF F GGSSG w L QW IANYLS - PGSPL Y IV L Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 323 A V LII I FTYFYTAIT VPTNKM AD D LK R SGGFIPGIRPGK E T GN YLDK IMSLI TL P G S IFLAL L A V LP AVVVKLMD V Q agw 402
Cdd:COG0201 315 A L LII F FTYFYTAIT FNPEEI AD N LK K SGGFIPGIRPGK P T AE YLDK VLTRL TL V G A IFLAL I A I LP EILGAITG V P --- 391
410 420 430
....*....|....*....|....*....|....*..
gi 1819723109 403 a LFY GGTSLLI M VGVA I DT VQ Q VN S Y LL N RHY D G LM K 439
Cdd:COG0201 392 - FYF GGTSLLI V VGVA L DT MK Q IE S Q LL M RHY E G FL K 427
SecY
pfam00344 SecY;
74-422
1.12e-127
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 372.16
E-value: 1.12e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 74 S V FALGIMPYI S ASI VV QL M G IA I p Y L QK L Q KEGE S GRK T INQ I TR W LT IGICIV QA PAYLYG LG algvpdsaf V L G K G L 153
Cdd:pfam00344 1 S L FALGIMPYI T ASI IM QL L G VV I - S L EE L K KEGE E GRK K INQ Y TR Y LT VVLALI QA IGIVLS LG --------- V Y G G G G 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 154 D F IVPA V II L VT G CV F A MWLGE K IT DK GIGNGISL L I MV GI I A T LP Q AF AQEFVSRTTNNTGG I MFM L IEV I VWFL VI LA 233
Cdd:pfam00344 71 G F YLLI V LQ L TA G TM F L MWLGE Q IT KY GIGNGISL I I FA GI V A R LP S AF SGALIALFRLGARS I LPN L LLL I ITLA VI AL 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 234 S VYL TM A V R Q IPVQYA R R T asggyekn V M G ARQ Y I PLKLN AS GV M PIIFA QAIMFA P SL I GRT F NDTAAGQWM evqfa D I 313
Cdd:pfam00344 151 V VYL QQ A E R R IPVQYA K R V -------- V G G QSS Y L PLKLN YA GV I PIIFA SSLLSF P AT I AQF F GLQFIAAAL ----- D P 217
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 314 FGLA Y NI L F A V LII I F T YFYTAIT VPTNKM A DD LK RS GGFIPGIRPGK E T GN YLD KIMSL ITL P G SI FL ALL AVLP AVVV 393
Cdd:pfam00344 218 GSPL Y TV L Y A L LII F F A YFYTAIT FNPKDI A EN LK KQ GGFIPGIRPGK P T AK YLD RVIPR ITL L G AL FL GII AVLP DLLG 297
330 340
....*....|....*....|....*....
gi 1819723109 394 K L MD V QA G walf Y GGTSLLI M VGVA I DT V 422
Cdd:pfam00344 298 A L TG V PF G ---- F GGTSLLI V VGVA L DT Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-434
6.14e-107
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 322.70
E-value: 6.14e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 18 R QRIIL TLGLL LVY R F G AQVVL PGID TAQLAE L ST Q te N G I L G I LN A F T GGA FANA S V FALGI M PYI S ASI VV QL MGIAI 97
Cdd:TIGR00967 1 R EKLLF TLGLL VLF R I G TFIPI PGID ASAFQN L IQ Q -- N P I F G L LN T F S GGA LGQI S I FALGI S PYI T ASI II QL LTGDV 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 98 P Y L QK LQ - KEGE S GR KT INQ I TR W LT IGICIV Q APAYLYGLGALG V P D safvlg K G LD F IVPA VI I L V TG CVFA MWLGE K 176
Cdd:TIGR00967 79 P P L LQ LQ k KEGE I GR RK INQ L TR Y LT LILAFI Q SLGIVMTGMYGY V G D ------ P G AF F YLLI VI Q L T TG SMIV MWLGE Q 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 177 IT DK GIGNGISLLI MV GI I AT L P QAFA Q EFVS R TTNNTGG I M F M ----- L IEV I VWFL V ILAS V YLTM A V R Q IP V Q Y A R R 251
Cdd:TIGR00967 153 IT KY GIGNGISLLI FA GI A AT I P SGLL Q PTEV R QSKVRDL I S F L qnlpf L LYL I ATII V FAVV V FVQQ A R R K IP I Q S A K R 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 252 TASGGY eknvm GARQ Y I PLKLN AS GV M P I IFA Q A IMFA P SL I GRTF N DTAA G Q W ----- MEVQFA D IF G L ayn IL FAV LI 326
Cdd:TIGR00967 233 QGGRRG ----- SQST Y L PLKLN YA GV I P V IFA S A LLSN P AT I SQFL N SNQG G A W flnpi LSLSLS D PI G A --- IL YLI LI 304
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 327 I I F TY FY TAITVPTNK MA DD LK RS G G FIPGIRPGK E T GN YL DKIMSLI T LP GS I FL A L L A V LP AVVVKLMDVQAGWA L fy 406
Cdd:TIGR00967 305 I F F SF FY VELQLNPED MA KN LK KQ G M FIPGIRPGK M T EK YL KRVIPRL T FV GS L FL G L I A L LP NFLGAIGGLPTSKG L -- 382
410 420
....*....|....*....|....*...
gi 1819723109 407 GGTSLLI M VGVAIDT VQ Q VN S Y L LN R H Y 434
Cdd:TIGR00967 383 GGTSLLI V VGVAIDT YK Q LE S E L IS R N Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-439
5.20e-101
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 307.70
E-value: 5.20e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 15 DEL RQ R IIL TLGLLL VY R F G AQVVL PGID TA QL AELSTQ te N GI L GI LN A F T GG A F ANASV FALGI M PYI S ASI VV QL MG 94
Cdd:CHL00161 8 DEL LN R LLF TLGLLL LI R L G TFIPV PGID HT QL YPSLSN -- N PL L NL LN T F S GG G F FVIGL FALGI L PYI N ASI II QL LT 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 95 IA IP Y L Q KLQKE - GE S GR KT INQ I TR W LT I G IC I V Q APAYLYG L galgvpd SAFVLGKG L DFIVPA V II L VT G CVFAM WL 173
Cdd:CHL00161 86 SI IP S L E KLQKE e GE A GR RK INQ Y TR Y LT L G WA I I Q SIGISFW L ------- KPYLFNWN L LLALEI V LA L TS G SMIVL WL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 174 G E K IT D KG I GNG I SLLI MVG I IAT LP QAFAQEFV S RTT N N T gg I MFM L IEVIVW F LVILASVY L TM A V R Q IP VQY A RRTA 253
Cdd:CHL00161 159 S E L IT E KG L GNG S SLLI FFN I VSN LP KLLQSLLF S LSA N I T -- I LSI L LLLFLF F ITLIGIIF L QE A I R K IP LIS A KQLG 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 254 SGGYEKN vmga RQ Y I PL K LN AS GVMPIIFA Q A IMFA P SLIGRTFNDTAAGQWME - VQFADI F GLA Y NI L FA VLI II F T YF 332
Cdd:CHL00161 237 KSSRLAS ---- NS Y L PL R LN QA GVMPIIFA S A LLVL P GYLTNILLNQFLLPLLS l FLQLAS F KIL Y LV L YF VLI LF F S YF 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 333 Y TA I TVPTNKMADD L KRSGGF IPGIRPGK E T GN YL D K IMSLI TL P G SI FLA LL A V LP AVVVKLMDVQA gw ALFY G G TSLL 412
Cdd:CHL00161 313 Y ST I VLNPKDISEN L QKMAVS IPGIRPGK A T TK YL K K TLNRL TL L G AL FLA FI A L LP NLIESVLNLSV -- FKGL G T TSLL 390
410 420
....*....|....*....|....*..
gi 1819723109 413 I M VGVAIDT VQ Q VNS YL LNRH Y DGLMK 439
Cdd:CHL00161 391 I L VGVAIDT SR Q IQT YL ISNN Y ENMYD 417
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
4-439
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 564.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 4 FIE T IS N IW KI D ELR Q RI IL TLG L L L VYR F G AQVVL PGID T A Q LA E L ST Q TEN G I LG I LN A F T GGA FANA S V FALGIMPY 83
Cdd:COG0201 1 MLS T LK N AF KI P ELR K RI LF TLG I L I VYR L G SHIPV PGID P A A LA Q L FA Q QSG G L LG L LN M F S GGA LSRF S I FALGIMPY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 84 I S ASI VV QL MGIA IP Y L QK LQKEGE S GRK T I N Q I TR W LT IGICIV QA PAYLY GL GA l G V P DSAF V LGK G LD F IVPA VI I L 163
Cdd:COG0201 81 I T ASI IM QL LTVV IP K L EE LQKEGE E GRK K I T Q Y TR Y LT VVLALL QA FGIAL GL RS - G P P GGGL V IDP G IL F YLLT VI T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 164 VT G CV F A MWLGE K IT DK GIGNGISL L I MV GI I A T LP Q A F AQ E F VSRT T n NTGG I MFM L IEVIVWFL VI LAS V YLTM A V R Q 243
Cdd:COG0201 160 TA G TM F L MWLGE Q IT ER GIGNGISL I I FA GI V A R LP S A L AQ I F ELVR T - GELS I LLL L LLLVLALA VI AFV V FVEQ A Q R R 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 244 IPVQYA R R TASG gye KNVM G ARQ Y I PLK L N AS GV M PIIFA QAIMFA P SL I GRT F NDTAA - G QW MEVQFA d IFGLA Y NI L F 322
Cdd:COG0201 239 IPVQYA K R VVGR --- RMYG G QST Y L PLK V N MA GV I PIIFA SSLLLF P AT I AQF F GGSSG w L QW IANYLS - PGSPL Y IV L Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 323 A V LII I FTYFYTAIT VPTNKM AD D LK R SGGFIPGIRPGK E T GN YLDK IMSLI TL P G S IFLAL L A V LP AVVVKLMD V Q agw 402
Cdd:COG0201 315 A L LII F FTYFYTAIT FNPEEI AD N LK K SGGFIPGIRPGK P T AE YLDK VLTRL TL V G A IFLAL I A I LP EILGAITG V P --- 391
410 420 430
....*....|....*....|....*....|....*..
gi 1819723109 403 a LFY GGTSLLI M VGVA I DT VQ Q VN S Y LL N RHY D G LM K 439
Cdd:COG0201 392 - FYF GGTSLLI V VGVA L DT MK Q IE S Q LL M RHY E G FL K 427
SecY
pfam00344 SecY;
74-422
1.12e-127
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 372.16
E-value: 1.12e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 74 S V FALGIMPYI S ASI VV QL M G IA I p Y L QK L Q KEGE S GRK T INQ I TR W LT IGICIV QA PAYLYG LG algvpdsaf V L G K G L 153
Cdd:pfam00344 1 S L FALGIMPYI T ASI IM QL L G VV I - S L EE L K KEGE E GRK K INQ Y TR Y LT VVLALI QA IGIVLS LG --------- V Y G G G G 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 154 D F IVPA V II L VT G CV F A MWLGE K IT DK GIGNGISL L I MV GI I A T LP Q AF AQEFVSRTTNNTGG I MFM L IEV I VWFL VI LA 233
Cdd:pfam00344 71 G F YLLI V LQ L TA G TM F L MWLGE Q IT KY GIGNGISL I I FA GI V A R LP S AF SGALIALFRLGARS I LPN L LLL I ITLA VI AL 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 234 S VYL TM A V R Q IPVQYA R R T asggyekn V M G ARQ Y I PLKLN AS GV M PIIFA QAIMFA P SL I GRT F NDTAAGQWM evqfa D I 313
Cdd:pfam00344 151 V VYL QQ A E R R IPVQYA K R V -------- V G G QSS Y L PLKLN YA GV I PIIFA SSLLSF P AT I AQF F GLQFIAAAL ----- D P 217
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 314 FGLA Y NI L F A V LII I F T YFYTAIT VPTNKM A DD LK RS GGFIPGIRPGK E T GN YLD KIMSL ITL P G SI FL ALL AVLP AVVV 393
Cdd:pfam00344 218 GSPL Y TV L Y A L LII F F A YFYTAIT FNPKDI A EN LK KQ GGFIPGIRPGK P T AK YLD RVIPR ITL L G AL FL GII AVLP DLLG 297
330 340
....*....|....*....|....*....
gi 1819723109 394 K L MD V QA G walf Y GGTSLLI M VGVA I DT V 422
Cdd:pfam00344 298 A L TG V PF G ---- F GGTSLLI V VGVA L DT Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
18-434
6.14e-107
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 322.70
E-value: 6.14e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 18 R QRIIL TLGLL LVY R F G AQVVL PGID TAQLAE L ST Q te N G I L G I LN A F T GGA FANA S V FALGI M PYI S ASI VV QL MGIAI 97
Cdd:TIGR00967 1 R EKLLF TLGLL VLF R I G TFIPI PGID ASAFQN L IQ Q -- N P I F G L LN T F S GGA LGQI S I FALGI S PYI T ASI II QL LTGDV 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 98 P Y L QK LQ - KEGE S GR KT INQ I TR W LT IGICIV Q APAYLYGLGALG V P D safvlg K G LD F IVPA VI I L V TG CVFA MWLGE K 176
Cdd:TIGR00967 79 P P L LQ LQ k KEGE I GR RK INQ L TR Y LT LILAFI Q SLGIVMTGMYGY V G D ------ P G AF F YLLI VI Q L T TG SMIV MWLGE Q 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 177 IT DK GIGNGISLLI MV GI I AT L P QAFA Q EFVS R TTNNTGG I M F M ----- L IEV I VWFL V ILAS V YLTM A V R Q IP V Q Y A R R 251
Cdd:TIGR00967 153 IT KY GIGNGISLLI FA GI A AT I P SGLL Q PTEV R QSKVRDL I S F L qnlpf L LYL I ATII V FAVV V FVQQ A R R K IP I Q S A K R 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 252 TASGGY eknvm GARQ Y I PLKLN AS GV M P I IFA Q A IMFA P SL I GRTF N DTAA G Q W ----- MEVQFA D IF G L ayn IL FAV LI 326
Cdd:TIGR00967 233 QGGRRG ----- SQST Y L PLKLN YA GV I P V IFA S A LLSN P AT I SQFL N SNQG G A W flnpi LSLSLS D PI G A --- IL YLI LI 304
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 327 I I F TY FY TAITVPTNK MA DD LK RS G G FIPGIRPGK E T GN YL DKIMSLI T LP GS I FL A L L A V LP AVVVKLMDVQAGWA L fy 406
Cdd:TIGR00967 305 I F F SF FY VELQLNPED MA KN LK KQ G M FIPGIRPGK M T EK YL KRVIPRL T FV GS L FL G L I A L LP NFLGAIGGLPTSKG L -- 382
410 420
....*....|....*....|....*...
gi 1819723109 407 GGTSLLI M VGVAIDT VQ Q VN S Y L LN R H Y 434
Cdd:TIGR00967 383 GGTSLLI V VGVAIDT YK Q LE S E L IS R N Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-439
5.20e-101
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 307.70
E-value: 5.20e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 15 DEL RQ R IIL TLGLLL VY R F G AQVVL PGID TA QL AELSTQ te N GI L GI LN A F T GG A F ANASV FALGI M PYI S ASI VV QL MG 94
Cdd:CHL00161 8 DEL LN R LLF TLGLLL LI R L G TFIPV PGID HT QL YPSLSN -- N PL L NL LN T F S GG G F FVIGL FALGI L PYI N ASI II QL LT 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 95 IA IP Y L Q KLQKE - GE S GR KT INQ I TR W LT I G IC I V Q APAYLYG L galgvpd SAFVLGKG L DFIVPA V II L VT G CVFAM WL 173
Cdd:CHL00161 86 SI IP S L E KLQKE e GE A GR RK INQ Y TR Y LT L G WA I I Q SIGISFW L ------- KPYLFNWN L LLALEI V LA L TS G SMIVL WL 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 174 G E K IT D KG I GNG I SLLI MVG I IAT LP QAFAQEFV S RTT N N T gg I MFM L IEVIVW F LVILASVY L TM A V R Q IP VQY A RRTA 253
Cdd:CHL00161 159 S E L IT E KG L GNG S SLLI FFN I VSN LP KLLQSLLF S LSA N I T -- I LSI L LLLFLF F ITLIGIIF L QE A I R K IP LIS A KQLG 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 254 SGGYEKN vmga RQ Y I PL K LN AS GVMPIIFA Q A IMFA P SLIGRTFNDTAAGQWME - VQFADI F GLA Y NI L FA VLI II F T YF 332
Cdd:CHL00161 237 KSSRLAS ---- NS Y L PL R LN QA GVMPIIFA S A LLVL P GYLTNILLNQFLLPLLS l FLQLAS F KIL Y LV L YF VLI LF F S YF 312
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 333 Y TA I TVPTNKMADD L KRSGGF IPGIRPGK E T GN YL D K IMSLI TL P G SI FLA LL A V LP AVVVKLMDVQA gw ALFY G G TSLL 412
Cdd:CHL00161 313 Y ST I VLNPKDISEN L QKMAVS IPGIRPGK A T TK YL K K TLNRL TL L G AL FLA FI A L LP NLIESVLNLSV -- FKGL G T TSLL 390
410 420
....*....|....*....|....*..
gi 1819723109 413 I M VGVAIDT VQ Q VNS YL LNRH Y DGLMK 439
Cdd:CHL00161 391 I L VGVAIDT SR Q IQT YL ISNN Y ENMYD 417
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
19-434
7.81e-31
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 122.80
E-value: 7.81e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 19 QR I IL T LGL L LV Y RF G AQVVL P GIDTA qla ELSTQT E N g I L G I LN A F TGG AFANASV F A LG IM P YISAS I VV QL MGIAIP 98
Cdd:PRK12417 14 KK I LF T CFI L FI Y IL G SNISI P FVSYN --- DMLGGH E S - F L K I AA A N TGG DLRTLNI F S LG LG P WMTSM I IL QL FSYRKR 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 99 YLQKL Q KEG E SGRKT inqit R W LT IG I CIV Q AP A Y lyglg A L GV P DSAFV lgk GLDF I VPAVI ILVTG CV F AM WL GEKIT 178
Cdd:PRK12417 90 DGLMK Q TIE E QHYRE ----- R I LT LI I AVI Q SL A V ----- I L SL P SKERI --- SQTN I LLNTL ILVTG TM F LV WL SDLNA 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 179 DK GIG n G ISLLIM V GI I ATL PQ afa QEFVSRTTNNTGG I MFM L IEV I - VW FL VILAS V YLTMAVRQ I PVQYARRTA S ggy 257
Cdd:PRK12417 157 RY GIG - G PMPIVL V SM I KSI PQ --- DVIEYIDASHIVI I LLI L LVI I t LF FL YFIEL V EYRIPYND I MNHNRFKMY S --- 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 258 eknvmgarq Y IPL KLN AS G V MPI IFAQAIMFA P S ---- LI GRT F - N DTAAGQW M EV - Q F ADIF G L ayn ILFAV L IIIFT Y 331
Cdd:PRK12417 230 --------- Y LSI KLN PA G G MPI MYSMSLLVF P Q yiii LI LSI F p N NSGISAD M DM l S F GSPL G V --- TVYLI L QFLLS Y 297
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 332 F YTAITVP T NKM A D D LKR SG GF IPG IR PGK E T GN YL DK I MSLITLP G SI F LALL A VL P AVVVKLMDVQAGWAL F Y G gt SL 411
Cdd:PRK12417 298 F FSFVNIN T KQI A K D MLK SG NY IPG VY PGK D T ER YL NY I ARRFSWF G AL F VTVI A GI P LYFTLFDPHLSTEIY F S G -- QF 375
410 420
....*....|....*....|...
gi 1819723109 412 LIM VG VAIDTVQQVNSY L LNRH Y 434
Cdd:PRK12417 376 MMF VG MSFNIADEIRAL L YFDK Y 398
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
19-438
2.05e-29
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 118.68
E-value: 2.05e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 19 QR I IL T LGL L LV Y RF G AQVVL P GIDTA ql AELSTQTE N GILG I LN A F TGG AFANA S V F A LG IM P YISAS I VV QL MGI aip 98
Cdd:TIGR02920 4 KK I LF T CFI L II Y VL G SYIPI P FVEVS -- KQDMEGVK N SFFK I AI A N TGG NLTTL S I F S LG LG P WMTSM I IL QL FSF --- 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 99 yl Q K LQKEGESGR K TINQIT R W LT IG I C I V Q AP A YLY glgalgvpds A F VLGK GL -- DFIVP A VI ILVTG CVFAM WL GEK 176
Cdd:TIGR02920 79 -- T K SDGFDAQSP K EQQYRE R F LT LI I A I I Q GL A IIH ---------- S F TNKN GL sd FNMLL A TL ILVTG TCLLV WL ADL 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 177 ITDK GIG n G ISLLIM V GIIATL P QAFAQE F VSRTT nntg GIMFM LI EVIVWF L VI LA SVYLT mavr QIPVQYAR rt A S GG 256
Cdd:TIGR02920 147 NAKY GIG - G SMPIVL V SMLKNI P SNVFEL F QMSYI ---- WLIAL LI LLTLVA L FL LA FIERA ---- EYRIPVND -- I S LH 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 257 YEK N V M gar Q Y I P L KLN AS G V M PIIFAQAIMFA P S ---- L I GR T F - N DTAAGQ W M - EVQ F ADIF G L ayn ILFAV L IIIFT 330
Cdd:TIGR02920 216 NRS N L M --- S Y L P I KLN PA G G M MYMYVMSLLML P Q yiii L L GR I F p N SSLINN W V f QFS F SSPV G I --- LIYLI L QMLLS 289
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 331 YF Y T AITVPTNKMADDLKR SG GF IPGI R PGK E T GN YL DKIMSLITLP G SI F L A LLAVL P AVVVKLMDVQAGW A LFY G gt S 410
Cdd:TIGR02920 290 YF F T FVNINPKEISKSFRK SG NY IPGI A PGK D T QR YL NRLARRFCWF G GV F N A FQLGI P LYFALFVPHLLTE A YIP G -- Q 367
410 420
....*....|....*....|....*...
gi 1819723109 411 LLIMV G VAIDTVQQVNSY L LNRH Y DG L M 438
Cdd:TIGR02920 368 FMMIT G MSFNIADEIRTI L YFDR Y KP L L 395
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
17-419
2.12e-18
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 87.20
E-value: 2.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 17 LRQRIIL T LGL L LV Y RFGAQVV L P GI D taqlaelst Q TENGILGI L NAFTG G A F A na SVFA LGI M P YIS A S I VV QL MGIA 96
Cdd:PRK08568 26 FKEKLKW T AIV L IL Y FILTNIP L Y GI S --------- Q SSQDLFEL L RIIFA G S F G -- TLLQ LGI G P IVT A G I IL QL LVGS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 97 ip Y L QK L QKEGESG R KTINQITRW L T I GICIVQ A PAYLYG l GA L G v P DSAFVLGKG L DFIV pa VII L VT G CVFAMW L G E K 176
Cdd:PRK08568 95 -- K L IN L DLSDPED R ALFQGLQKL L A I VMIALE A APFVLA - GA F G - P ATGLASTPL L ALLI -- FLQ L FL G GILIIL L D E L 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 177 ITDK GIG N GISL L I M ---------------------- VG I I AT L PQ A FAQ -- EFVSRTTNNT G GIMFM LI EV IV W FL VI l 232
Cdd:PRK08568 169 VSKW GIG S GISL F I L agvsqtifvglfnwltggqglp VG F I PA L FS A ITS gn LTLALLLTTR G LLLLG LI TT IV I FL IV - 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 233 as VYL TMAVRQ IP VQYA R rtasggyekn V M GAR QYI PLK LNASG V M P I I FAQ A IMFAPS L I G RTFND --- TAA G QWMEVQ 309
Cdd:PRK08568 248 -- VYL ESMRVE IP LSHG R ---------- V R GAR GRY PLK FIYVS V L P V I LVR A LQANIQ L F G QLLQR lgi PIL G TYDSSG 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 310 FAD I F GLAY --------------------- NILFA VL I I I F TY F YTAI T - VPTNKM A DD L KR SG GF IPG I R PG - K ETGNY 366
Cdd:PRK08568 316 ASP I S GLAY ylspphspydwiqdplraiiy ALFMI VL S I L F AI F WVET T g LDPKTQ A RQ L QN SG MQ IPG F R RN p K VIEKV 395
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1819723109 367 L DKIMSLI T LP G SIFLA LLAVL PAVVVK L M dvqagwalfy GGT S LL IM V GVAI 419
Cdd:PRK08568 396 L ERYIPPV T VI G GAIVG LLAVL ADLLGA L G ---------- GGT G LL LT V SIVY 438
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
78-369
1.25e-04
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 44.23
E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 78 LGI M P YISA S I V V QL MGIA -- I PYL Q KLQKE gesg R KTINQITRW L TIG I CIVQ A P AY LYG l G AL G VPD saf VL G K G LDF 155
Cdd:PTZ00219 81 LGI S P IVTS S M V M QL LAGS ki I DVD Q NNKED ---- R ALFEGAQKL L GLL I TLGE A V AY VWS - G MY G DIS --- EI G A G NAI 152
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 156 IV pa VII L VTGCVFAMW L G E KITDK - G I G N GISL L I MVG I IA T - LPQ AF aqefv S R TT N NTG - G IM F M ------------ 220
Cdd:PTZ00219 153 LI -- ILQ L FFAGIVVIL L D E LLQKG y G L G S GISL F I ATN I CE T i IWK AF ----- S P TT I NTG r G TE F E gaiialfhllft 225
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 221 ------------------- L IEVIVWF LV I L ASV Y LTMAVRQI P VQY arrtasggye KN V M G AR Q YI P L KL NASGVM PII 281
Cdd:PTZ00219 226 rsdklralkeafyrphlpn L TNLLATV LV F L VVI Y FQGFRVDL P LKS ---------- QK V R G QQ Q SY P I KL FYTSNI PII 295
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819723109 282 FAQ A ---- IM F APSLIG R T F NDT ---- AA GQW M EV QFAD ---- IF GLAY NI ------------- LFAV L I I I F TY F YT A I 336
Cdd:PTZ00219 296 LQT A lvsn LY F FSQILY R R F KNN flin LL GQW Q EV EYSG qsvp VG GLAY YL sppnsfsdiindp IHTI L Y I V F VL F SC A L 375
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1819723109 337 TVP T --------- NKM A DD LK RS G GFIP G I R PGKETGNY L DK 369
Cdd:PTZ00219 376 FSK T wievsgssa KDV A KQ LK DQ G MGMV G Y R DSSSMVRV L NR 417
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
