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Concise Results
Standard Results
Full Results
preprotein translocase subunit SecY [Blautia producta ATCC 27340 = DSM 2950]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-436
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 555.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 1 ML E TL R NAFKI KDV R R RI YYV L LM L VIV R I GS QL P I PG V D RDFFKN LFA S QS NDAFNFF N A F T GG SFEQM SIFAL S I T PY 80
Cdd:COG0201 1 ML S TL K NAFKI PEL R K RI LFT L GI L IVY R L GS HI P V PG I D PAALAQ LFA Q QS GGLLGLL N M F S GG ALSRF SIFAL G I M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 81 IT S SII I QLLT IA IPKLEE M Q RD GEEGRKK M T AI TRYLTV G LAL F Q SVAMVI G F ---- GNR G WLTEMNFTSIVVA V V TLT 156
Cdd:COG0201 81 IT A SII M QLLT VV IPKLEE L Q KE GEEGRKK I T QY TRYLTV V LAL L Q AFGIAL G L rsgp PGG G LVIDPGILFYLLT V I TLT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 157 G G SAM LMW I GEQITE K G V GNGIS IVLMIN IV S R I PS D LA SL FE KFVK G kti ARGG L AAIIIMAIIIV V VVL V LILNGGE R 236
Cdd:COG0201 161 A G TMF LMW L GEQITE R G I GNGIS LIIFAG IV A R L PS A LA QI FE LVRT G --- ELSI L LLLLLLVLALA V IAF V VFVEQAQ R 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 237 K IPVQY S K KM VGR K M M GGQS SAI PLKVN T AGVIPIIFASSL MS FP VV IA S F L G KGG G TGIGS kilkglts S N WFN P NE P V 316
Cdd:COG0201 238 R IPVQY A K RV VGR R M Y GGQS TYL PLKVN M AGVIPIIFASSL LL FP AT IA Q F F G GSS G WLQWI -------- A N YLS P GS P L 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 317 Y sig L V V Y IV L V IFF A YFYT S ITFNP M E V ADN M KK Q GGFIPGIRPGKPT Q EYL E K I L SYIIFI GA TG L VIV A VI P FFFNG 396
Cdd:COG0201 310 Y --- I V L Y AL L I IFF T YFYT A ITFNP E E I ADN L KK S GGFIPGIRPGKPT A EYL D K V L TRLTLV GA IF L ALI A IL P EILGA 386
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1810227089 397 VF G ANVS FGGTS II IVVGV V L E T I KQ V ES RM L V R N Y K GFL 436
Cdd:COG0201 387 IT G VPFY FGGTS LL IVVGV A L D T M KQ I ES QL L M R H Y E GFL 426
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-436
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 555.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 1 ML E TL R NAFKI KDV R R RI YYV L LM L VIV R I GS QL P I PG V D RDFFKN LFA S QS NDAFNFF N A F T GG SFEQM SIFAL S I T PY 80
Cdd:COG0201 1 ML S TL K NAFKI PEL R K RI LFT L GI L IVY R L GS HI P V PG I D PAALAQ LFA Q QS GGLLGLL N M F S GG ALSRF SIFAL G I M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 81 IT S SII I QLLT IA IPKLEE M Q RD GEEGRKK M T AI TRYLTV G LAL F Q SVAMVI G F ---- GNR G WLTEMNFTSIVVA V V TLT 156
Cdd:COG0201 81 IT A SII M QLLT VV IPKLEE L Q KE GEEGRKK I T QY TRYLTV V LAL L Q AFGIAL G L rsgp PGG G LVIDPGILFYLLT V I TLT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 157 G G SAM LMW I GEQITE K G V GNGIS IVLMIN IV S R I PS D LA SL FE KFVK G kti ARGG L AAIIIMAIIIV V VVL V LILNGGE R 236
Cdd:COG0201 161 A G TMF LMW L GEQITE R G I GNGIS LIIFAG IV A R L PS A LA QI FE LVRT G --- ELSI L LLLLLLVLALA V IAF V VFVEQAQ R 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 237 K IPVQY S K KM VGR K M M GGQS SAI PLKVN T AGVIPIIFASSL MS FP VV IA S F L G KGG G TGIGS kilkglts S N WFN P NE P V 316
Cdd:COG0201 238 R IPVQY A K RV VGR R M Y GGQS TYL PLKVN M AGVIPIIFASSL LL FP AT IA Q F F G GSS G WLQWI -------- A N YLS P GS P L 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 317 Y sig L V V Y IV L V IFF A YFYT S ITFNP M E V ADN M KK Q GGFIPGIRPGKPT Q EYL E K I L SYIIFI GA TG L VIV A VI P FFFNG 396
Cdd:COG0201 310 Y --- I V L Y AL L I IFF T YFYT A ITFNP E E I ADN L KK S GGFIPGIRPGKPT A EYL D K V L TRLTLV GA IF L ALI A IL P EILGA 386
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1810227089 397 VF G ANVS FGGTS II IVVGV V L E T I KQ V ES RM L V R N Y K GFL 436
Cdd:COG0201 387 IT G VPFY FGGTS LL IVVGV A L D T M KQ I ES QL L M R H Y E GFL 426
SecY
pfam00344 SecY;
71-420
2.10e-128
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 373.70
E-value: 2.10e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 71 S I FAL S I T PYIT S SII I QLL TIA I p K LEE MQRD GEEGRKK MTAI TRYLTV G LAL F Q SVAM V IGF G NR G W ltem NFTSIVV 150
Cdd:pfam00344 1 S L FAL G I M PYIT A SII M QLL GVV I - S LEE LKKE GEEGRKK INQY TRYLTV V LAL I Q AIGI V LSL G VY G G ---- GGGFYLL 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 151 A V VT LT G G SAM LMW I GEQIT EK G V GNGIS IVLMIN IV S R I PS DLASLF ek FVKGKTI AR GG L AAIIIMA I IIV V VV LV LI 230
Cdd:pfam00344 76 I V LQ LT A G TMF LMW L GEQIT KY G I GNGIS LIIFAG IV A R L PS AFSGAL -- IALFRLG AR SI L PNLLLLI I TLA V IA LV VY 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 231 L NGG ER K IPVQY S K KM VG rkmmg GQSS AI PLK V N T AGVIPIIFASSL M SFP VV IA S F L G KG ggtgigskilkgl TSSNWF 310
Cdd:pfam00344 154 L QQA ER R IPVQY A K RV VG ----- GQSS YL PLK L N Y AGVIPIIFASSL L SFP AT IA Q F F G LQ ------------- FIAAAL 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 311 N P NE P V Y sig L V V Y IV L V IFFAYFYT S ITFNP MEV A D N M KKQGGFIPGIRPGKPT QE YL EKILSY I IFI GA TG L V I V AV I 390
Cdd:pfam00344 216 D P GS P L Y --- T V L Y AL L I IFFAYFYT A ITFNP KDI A E N L KKQGGFIPGIRPGKPT AK YL DRVIPR I TLL GA LF L G I I AV L 292
330 340 350
....*....|....*....|....*....|
gi 1810227089 391 P FFFNGVF G ANVS FGGTS II IVVGV V L E T I 420
Cdd:pfam00344 293 P DLLGALT G VPFG FGGTS LL IVVGV A L D T Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
15-432
5.39e-118
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 350.43
E-value: 5.39e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 15 R RRIYYV L LM LV IV RIG SQL PIPG V D RDF F K NL F as Q S N DA F NFF N A F T GG SFE Q M SIFAL S I T PYIT S SIIIQLLT IAI 94
Cdd:TIGR00967 1 R EKLLFT L GL LV LF RIG TFI PIPG I D ASA F Q NL I -- Q Q N PI F GLL N T F S GG ALG Q I SIFAL G I S PYIT A SIIIQLLT GDV 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 95 P K L EEM Q - RD GE E GR K K MTAI TRYLT VG LA LF QS VAM V i GF G NR G WLTEMNFTSIVVA V VT LT G GS AML MW I GEQIT EK G 173
Cdd:TIGR00967 79 P P L LQL Q k KE GE I GR R K INQL TRYLT LI LA FI QS LGI V - MT G MY G YVGDPGAFFYLLI V IQ LT T GS MIV MW L GEQIT KY G 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 174 V GNGIS IVLMIN I VSR IPS D L ASLF E KFVKGKTIARGG L AAIIIMAII I VVVVLVLI --- LNGGE RKIP V Q YS K KMV GR K 250
Cdd:TIGR00967 158 I GNGIS LLIFAG I AAT IPS G L LQPT E VRQSKVRDLISF L QNLPFLLYL I ATIIVFAV vvf VQQAR RKIP I Q SA K RQG GR R 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 251 mm G G QS SAI PLK V N T AGVIP I IFAS S L M S F P VV I AS FL GKGG G TGIGSKILKG L TS S NW fnpnepvys IG LVV Y IV L V IF 330
Cdd:TIGR00967 238 -- G S QS TYL PLK L N Y AGVIP V IFAS A L L S N P AT I SQ FL NSNQ G GAWFLNPILS L SL S DP --------- IG AIL Y LI L I IF 306
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 331 F AY FY TSITF NP MEV A D N M KKQG G FIPGIRPGK P T QE YL EKILSYII F I G ATG L VIV A VI P F F FNGVF G ANV S -- F GGTS 408
Cdd:TIGR00967 307 F SF FY VELQL NP EDM A K N L KKQG M FIPGIRPGK M T EK YL KRVIPRLT F V G SLF L GLI A LL P N F LGAIG G LPT S kg L GGTS 386
410 420
....*....|....*....|....
gi 1810227089 409 II IVVGV VLE T I KQ V ES RMLV RNY 432
Cdd:TIGR00967 387 LL IVVGV AID T Y KQ L ES ELIS RNY 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
12-433
9.70e-99
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 301.53
E-value: 9.70e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 12 KDVRR R IYYV L LM L VIV R I G SQL P I PG V D RDFFKNLF as QS N DAF N FF N A F T GG S F EQMSI FAL S I T PYI TS SIIIQLLT 91
Cdd:CHL00161 8 DELLN R LLFT L GL L LLI R L G TFI P V PG I D HTQLYPSL -- SN N PLL N LL N T F S GG G F FVIGL FAL G I L PYI NA SIIIQLLT 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 92 IA IP K LE EM Q RD - GE E GR K K MTAI TRYLT V G L A LF QS VA mv I G F GNRGW L TEM N FTSIVVA V VT LT G GS AMLM W IG E Q IT 170
Cdd:CHL00161 86 SI IP S LE KL Q KE e GE A GR R K INQY TRYLT L G W A II QS IG -- I S F WLKPY L FNW N LLLALEI V LA LT S GS MIVL W LS E L IT 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 171 EKG V GNG I S IVLMI NIVS RI P SD L A SL FEKFVKGK TI argg L AAIIIMAIIIVVVVLVLI L NGGE RKIP V q Y S K K MV G RK 250
Cdd:CHL00161 164 EKG L GNG S S LLIFF NIVS NL P KL L Q SL LFSLSANI TI ---- L SILLLLFLFFITLIGIIF L QEAI RKIP L - I S A K QL G KS 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 251 MMGGQS S AI PL KV N T AGV I PIIFAS S L MSF P VVIASF L GKGGG tgigskilkg L TSSNW F NPNEPVYSIG LV V Y I VL VI F 330
Cdd:CHL00161 239 SRLASN S YL PL RL N Q AGV M PIIFAS A L LVL P GYLTNI L LNQFL ---------- L PLLSL F LQLASFKILY LV L Y F VL IL F 308
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 331 F A YFY TS I TF NP MEVAD N MK K QGGF IPGIRPGK P T QE YL E K I L SYIIFI GA TG L VIV A VI P FFFNG V FGAN V -- SF G G TS 408
Cdd:CHL00161 309 F S YFY ST I VL NP KDISE N LQ K MAVS IPGIRPGK A T TK YL K K T L NRLTLL GA LF L AFI A LL P NLIES V LNLS V fk GL G T TS 388
410 420
....*....|....*....|....*
gi 1810227089 409 II I V VGV VLE T IK Q VESRMLVR NY K 433
Cdd:CHL00161 389 LL I L VGV AID T SR Q IQTYLISN NY E 413
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-436
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 555.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 1 ML E TL R NAFKI KDV R R RI YYV L LM L VIV R I GS QL P I PG V D RDFFKN LFA S QS NDAFNFF N A F T GG SFEQM SIFAL S I T PY 80
Cdd:COG0201 1 ML S TL K NAFKI PEL R K RI LFT L GI L IVY R L GS HI P V PG I D PAALAQ LFA Q QS GGLLGLL N M F S GG ALSRF SIFAL G I M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 81 IT S SII I QLLT IA IPKLEE M Q RD GEEGRKK M T AI TRYLTV G LAL F Q SVAMVI G F ---- GNR G WLTEMNFTSIVVA V V TLT 156
Cdd:COG0201 81 IT A SII M QLLT VV IPKLEE L Q KE GEEGRKK I T QY TRYLTV V LAL L Q AFGIAL G L rsgp PGG G LVIDPGILFYLLT V I TLT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 157 G G SAM LMW I GEQITE K G V GNGIS IVLMIN IV S R I PS D LA SL FE KFVK G kti ARGG L AAIIIMAIIIV V VVL V LILNGGE R 236
Cdd:COG0201 161 A G TMF LMW L GEQITE R G I GNGIS LIIFAG IV A R L PS A LA QI FE LVRT G --- ELSI L LLLLLLVLALA V IAF V VFVEQAQ R 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 237 K IPVQY S K KM VGR K M M GGQS SAI PLKVN T AGVIPIIFASSL MS FP VV IA S F L G KGG G TGIGS kilkglts S N WFN P NE P V 316
Cdd:COG0201 238 R IPVQY A K RV VGR R M Y GGQS TYL PLKVN M AGVIPIIFASSL LL FP AT IA Q F F G GSS G WLQWI -------- A N YLS P GS P L 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 317 Y sig L V V Y IV L V IFF A YFYT S ITFNP M E V ADN M KK Q GGFIPGIRPGKPT Q EYL E K I L SYIIFI GA TG L VIV A VI P FFFNG 396
Cdd:COG0201 310 Y --- I V L Y AL L I IFF T YFYT A ITFNP E E I ADN L KK S GGFIPGIRPGKPT A EYL D K V L TRLTLV GA IF L ALI A IL P EILGA 386
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1810227089 397 VF G ANVS FGGTS II IVVGV V L E T I KQ V ES RM L V R N Y K GFL 436
Cdd:COG0201 387 IT G VPFY FGGTS LL IVVGV A L D T M KQ I ES QL L M R H Y E GFL 426
SecY
pfam00344 SecY;
71-420
2.10e-128
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 373.70
E-value: 2.10e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 71 S I FAL S I T PYIT S SII I QLL TIA I p K LEE MQRD GEEGRKK MTAI TRYLTV G LAL F Q SVAM V IGF G NR G W ltem NFTSIVV 150
Cdd:pfam00344 1 S L FAL G I M PYIT A SII M QLL GVV I - S LEE LKKE GEEGRKK INQY TRYLTV V LAL I Q AIGI V LSL G VY G G ---- GGGFYLL 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 151 A V VT LT G G SAM LMW I GEQIT EK G V GNGIS IVLMIN IV S R I PS DLASLF ek FVKGKTI AR GG L AAIIIMA I IIV V VV LV LI 230
Cdd:pfam00344 76 I V LQ LT A G TMF LMW L GEQIT KY G I GNGIS LIIFAG IV A R L PS AFSGAL -- IALFRLG AR SI L PNLLLLI I TLA V IA LV VY 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 231 L NGG ER K IPVQY S K KM VG rkmmg GQSS AI PLK V N T AGVIPIIFASSL M SFP VV IA S F L G KG ggtgigskilkgl TSSNWF 310
Cdd:pfam00344 154 L QQA ER R IPVQY A K RV VG ----- GQSS YL PLK L N Y AGVIPIIFASSL L SFP AT IA Q F F G LQ ------------- FIAAAL 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 311 N P NE P V Y sig L V V Y IV L V IFFAYFYT S ITFNP MEV A D N M KKQGGFIPGIRPGKPT QE YL EKILSY I IFI GA TG L V I V AV I 390
Cdd:pfam00344 216 D P GS P L Y --- T V L Y AL L I IFFAYFYT A ITFNP KDI A E N L KKQGGFIPGIRPGKPT AK YL DRVIPR I TLL GA LF L G I I AV L 292
330 340 350
....*....|....*....|....*....|
gi 1810227089 391 P FFFNGVF G ANVS FGGTS II IVVGV V L E T I 420
Cdd:pfam00344 293 P DLLGALT G VPFG FGGTS LL IVVGV A L D T Y 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
15-432
5.39e-118
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 350.43
E-value: 5.39e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 15 R RRIYYV L LM LV IV RIG SQL PIPG V D RDF F K NL F as Q S N DA F NFF N A F T GG SFE Q M SIFAL S I T PYIT S SIIIQLLT IAI 94
Cdd:TIGR00967 1 R EKLLFT L GL LV LF RIG TFI PIPG I D ASA F Q NL I -- Q Q N PI F GLL N T F S GG ALG Q I SIFAL G I S PYIT A SIIIQLLT GDV 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 95 P K L EEM Q - RD GE E GR K K MTAI TRYLT VG LA LF QS VAM V i GF G NR G WLTEMNFTSIVVA V VT LT G GS AML MW I GEQIT EK G 173
Cdd:TIGR00967 79 P P L LQL Q k KE GE I GR R K INQL TRYLT LI LA FI QS LGI V - MT G MY G YVGDPGAFFYLLI V IQ LT T GS MIV MW L GEQIT KY G 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 174 V GNGIS IVLMIN I VSR IPS D L ASLF E KFVKGKTIARGG L AAIIIMAII I VVVVLVLI --- LNGGE RKIP V Q YS K KMV GR K 250
Cdd:TIGR00967 158 I GNGIS LLIFAG I AAT IPS G L LQPT E VRQSKVRDLISF L QNLPFLLYL I ATIIVFAV vvf VQQAR RKIP I Q SA K RQG GR R 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 251 mm G G QS SAI PLK V N T AGVIP I IFAS S L M S F P VV I AS FL GKGG G TGIGSKILKG L TS S NW fnpnepvys IG LVV Y IV L V IF 330
Cdd:TIGR00967 238 -- G S QS TYL PLK L N Y AGVIP V IFAS A L L S N P AT I SQ FL NSNQ G GAWFLNPILS L SL S DP --------- IG AIL Y LI L I IF 306
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 331 F AY FY TSITF NP MEV A D N M KKQG G FIPGIRPGK P T QE YL EKILSYII F I G ATG L VIV A VI P F F FNGVF G ANV S -- F GGTS 408
Cdd:TIGR00967 307 F SF FY VELQL NP EDM A K N L KKQG M FIPGIRPGK M T EK YL KRVIPRLT F V G SLF L GLI A LL P N F LGAIG G LPT S kg L GGTS 386
410 420
....*....|....*....|....
gi 1810227089 409 II IVVGV VLE T I KQ V ES RMLV RNY 432
Cdd:TIGR00967 387 LL IVVGV AID T Y KQ L ES ELIS RNY 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
12-433
9.70e-99
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 301.53
E-value: 9.70e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 12 KDVRR R IYYV L LM L VIV R I G SQL P I PG V D RDFFKNLF as QS N DAF N FF N A F T GG S F EQMSI FAL S I T PYI TS SIIIQLLT 91
Cdd:CHL00161 8 DELLN R LLFT L GL L LLI R L G TFI P V PG I D HTQLYPSL -- SN N PLL N LL N T F S GG G F FVIGL FAL G I L PYI NA SIIIQLLT 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 92 IA IP K LE EM Q RD - GE E GR K K MTAI TRYLT V G L A LF QS VA mv I G F GNRGW L TEM N FTSIVVA V VT LT G GS AMLM W IG E Q IT 170
Cdd:CHL00161 86 SI IP S LE KL Q KE e GE A GR R K INQY TRYLT L G W A II QS IG -- I S F WLKPY L FNW N LLLALEI V LA LT S GS MIVL W LS E L IT 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 171 EKG V GNG I S IVLMI NIVS RI P SD L A SL FEKFVKGK TI argg L AAIIIMAIIIVVVVLVLI L NGGE RKIP V q Y S K K MV G RK 250
Cdd:CHL00161 164 EKG L GNG S S LLIFF NIVS NL P KL L Q SL LFSLSANI TI ---- L SILLLLFLFFITLIGIIF L QEAI RKIP L - I S A K QL G KS 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 251 MMGGQS S AI PL KV N T AGV I PIIFAS S L MSF P VVIASF L GKGGG tgigskilkg L TSSNW F NPNEPVYSIG LV V Y I VL VI F 330
Cdd:CHL00161 239 SRLASN S YL PL RL N Q AGV M PIIFAS A L LVL P GYLTNI L LNQFL ---------- L PLLSL F LQLASFKILY LV L Y F VL IL F 308
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 331 F A YFY TS I TF NP MEVAD N MK K QGGF IPGIRPGK P T QE YL E K I L SYIIFI GA TG L VIV A VI P FFFNG V FGAN V -- SF G G TS 408
Cdd:CHL00161 309 F S YFY ST I VL NP KDISE N LQ K MAVS IPGIRPGK A T TK YL K K T L NRLTLL GA LF L AFI A LL P NLIES V LNLS V fk GL G T TS 388
410 420
....*....|....*....|....*
gi 1810227089 409 II I V VGV VLE T IK Q VESRMLVR NY K 433
Cdd:CHL00161 389 LL I L VGV AID T SR Q IQTYLISN NY E 413
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
16-394
4.02e-35
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 134.09
E-value: 4.02e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 16 RR I YYVLLM L V I VRI GS QL PIP G V DRD ff K NLFASQS N DA F NFFN A F TGG SFEQM SIF A L SIT P YI TS S II I QL LTIAIP 95
Cdd:TIGR02920 4 KK I LFTCFI L I I YVL GS YI PIP F V EVS -- K QDMEGVK N SF F KIAI A N TGG NLTTL SIF S L GLG P WM TS M II L QL FSFTKS 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 96 KLEEM Q RDG E EGRKK mtait R Y LT VGL A LF Q SV A MVIG F G N RGW L TEM N fts IVV A VVT L TG G SAM L M W IGEQITEK G V G 175
Cdd:TIGR02920 82 DGFDA Q SPK E QQYRE ----- R F LT LII A II Q GL A IIHS F T N KNG L SDF N --- MLL A TLI L VT G TCL L V W LADLNAKY G I G 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 176 n G ISIVLMINIVSR IPS D las L FE K F VKGKTIA rggla AIIIMAIII V VVV L VLILNGG E RK IPV QYSKKMVGRKM M ggq 255
Cdd:TIGR02920 154 - G SMPIVLVSMLKN IPS N --- V FE L F QMSYIWL ----- IALLILLTL V ALF L LAFIERA E YR IPV NDISLHNRSNL M --- 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 256 s S AI P L K V N T AG VIPIIFAS SL MSF P VV I ASF LG KGGGTGIGSKIL kglts SNW F NPNE PV ysi G LVV Y IV L VIFFA YF Y 335
Cdd:TIGR02920 222 - S YL P I K L N P AG GMMYMYVM SL LML P QY I IIL LG RIFPNSSLINNW ----- VFQ F SFSS PV --- G ILI Y LI L QMLLS YF F 292
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1810227089 336 T SITF NP M E VADNMK K Q G GF IPGI R PGK P TQ E YL EKILSYIIFI G ATGLVIVAV IP FF F 394
Cdd:TIGR02920 293 T FVNI NP K E ISKSFR K S G NY IPGI A PGK D TQ R YL NRLARRFCWF G GVFNAFQLG IP LY F 351
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
7-438
1.40e-34
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 132.81
E-value: 1.40e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 7 NA F KI K DVRRR I YYVLLM L V I VRI GS QLP IP G V DRDFFKN lfas QSNDAFNFFN A F TGG SFEQMS IF A L SIT P YI TS S II 86
Cdd:PRK12417 5 KK F EY K IIYKK I LFTCFI L F I YIL GS NIS IP F V SYNDMLG ---- GHESFLKIAA A N TGG DLRTLN IF S L GLG P WM TS M II 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 87 I QL LTI a IPKLEE M QRDG EE GRKK mtai T R Y LT VGL A LF QS V A MVIGFGNR gwl TEMNF T S I VVAVVT L TG G SAM L M W IG 166
Cdd:PRK12417 81 L QL FSY - RKRDGL M KQTI EE QHYR ---- E R I LT LII A VI QS L A VILSLPSK --- ERISQ T N I LLNTLI L VT G TMF L V W LS 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 167 EQITEK G V G NGIS IV l MINIVSR IP S D LASLFEKFVKGKTIA rgglaaiii MAII I VVVVLVLILNGG E RK IP vq Y SKK M 246
Cdd:PRK12417 153 DLNARY G I G GPMP IV - LVSMIKS IP Q D VIEYIDASHIVIILL --------- ILLV I ITLFFLYFIELV E YR IP -- Y NDI M 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 247 VGRKMM gg QS S AIPL K V N T AG VI PI IFAS SL MS FP vvi ASFLGKGGGTGIGSKILKGLT ss NWFNPNE P vys I G LV VY IV 326
Cdd:PRK12417 221 NHNRFK -- MY S YLSI K L N P AG GM PI MYSM SL LV FP --- QYIIILILSIFPNNSGISADM -- DMLSFGS P --- L G VT VY LI 290
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 327 L VIFFA YF YTSITF N PMEV A DN M K K Q G GF IPG IR PGK P T QE YL EK I LSYIIFI GA TGLVIV A V IP FF F n GV F GAN --- VS 403
Cdd:PRK12417 291 L QFLLS YF FSFVNI N TKQI A KD M L K S G NY IPG VY PGK D T ER YL NY I ARRFSWF GA LFVTVI A G IP LY F - TL F DPH lst EI 369
410 420 430
....*....|....*....|....*....|....*
gi 1810227089 404 FGGTSIIIV VG VVLETIKQVESRMLVRN YK GF L SE 438
Cdd:PRK12417 370 YFSGQFMMF VG MSFNIADEIRALLYFDK YK PL L NQ 404
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
15-417
4.40e-13
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 70.64
E-value: 4.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 15 RRRIYYVLLM L VIVR I GSQL P IP G VD rdffknlfa SQ S N D A F NFFNAFTG GSF eq MSIFA L S I T P YI T SS II I QLL TIA i 94
Cdd:PRK08568 27 KEKLKWTAIV L ILYF I LTNI P LY G IS --------- QS S Q D L F ELLRIIFA GSF -- GTLLQ L G I G P IV T AG II L QLL VGS - 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 95 p KL EEMQRDGE E G R KKMTAITRY L TVGLALFQSVAM V IG f G NR G WL T EMNF T SIVVAVVT -- L TG G SAMLMWIG E QITEK 172
Cdd:PRK08568 95 - KL INLDLSDP E D R ALFQGLQKL L AIVMIALEAAPF V LA - G AF G PA T GLAS T PLLALLIF lq L FL G GILIILLD E LVSKW 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 173 G V G N GIS ----------- I V LMI N IVSRIPSDLASLFEKFV kg KT I AR G G L AAIIIMAIIIVVVVLVLI ---------- L 231
Cdd:PRK08568 173 G I G S GIS lfilagvsqti F V GLF N WLTGGQGLPVGFIPALF -- SA I TS G N L TLALLLTTRGLLLLGLIT tiviflivvy L 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 232 NGGERK IP VQYSK kmvgrkm MG G QSSAI PLK VNTAG V I P I I FASS L MSFPVVIASF L GKG G GTGI G SKILK G LTSSN --- 308
Cdd:PRK08568 251 ESMRVE IP LSHGR ------- VR G ARGRY PLK FIYVS V L P V I LVRA L QANIQLFGQL L QRL G IPIL G TYDSS G ASPIS gla 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 309 - WFN P NEPV Y S --------- I GLVVY IVL V I F FA Y F YTSI T - FN P MEV A DNMKKQ G GF IPG I R PGKPT qey L EK I L S - YI 376
Cdd:PRK08568 324 y YLS P PHSP Y D wiqdplrai I YALFM IVL S I L FA I F WVET T g LD P KTQ A RQLQNS G MQ IPG F R RNPKV --- I EK V L E r YI 400
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1810227089 377 IFIGAT G LV IV AVIPFFFN -- G VF G anvsf GGT SIIIV V GV V L 417
Cdd:PRK08568 401 PPVTVI G GA IV GLLAVLAD ll G AL G ----- GGT GLLLT V SI V Y 438
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
15-416
1.45e-04
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 43.84
E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 15 RRRIYYVLLM L VIVRIGS Q L P IP G V drdffknl FA S Q S N D A F NFFNAFTGGS fe QMSIFA L S I T P YI TSS III QLL TIA i 94
Cdd:PTZ00219 31 KEKVLWTAIA L FVFLVCC Q I P LY G I -------- RS S S S S D P F YWMRVILASN -- RGTLME L G I S P IV TSS MVM QLL AGS - 99
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 95 p K LEEMQRDGE E G R KKMTAITRY L TVGLA L FQS VA M V IG f G NR G WLT E MNFTSIVVAVVT L T g GSAMLMWIGEQITE K -- 172
Cdd:PTZ00219 100 - K IIDVDQNNK E D R ALFEGAQKL L GLLIT L GEA VA Y V WS - G MY G DIS E IGAGNAILIILQ L F - FAGIVVILLDELLQ K gy 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 173 G V G N GIS IVLMI NI V ---------- SR I PSDLASL FE K --------- F VKGKTIA ------- R GG L AAIIIMAIIIV V VV 226
Cdd:PTZ00219 177 G L G S GIS LFIAT NI C etiiwkafsp TT I NTGRGTE FE G aiialfhll F TRSDKLR alkeafy R PH L PNLTNLLATVL V FL 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 227 L V LILN G GERKI P VQYS K kmvgrkm MG GQ SSAI P L K VNTAGV IPII FASS L M S f PVVIA S FLGKGGGTGIGSKI L K G --- 303
Cdd:PTZ00219 257 V V IYFQ G FRVDL P LKSQ K ------- VR GQ QQSY P I K LFYTSN IPII LQTA L V S - NLYFF S QILYRRFKNNFLIN L L G qwq 328
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1810227089 304 ----------------- L TSS N W F NP -- N E P VYS I glv V YIV L V I F FAYFY -- T S I TFN --- PME VA DNM K K QG GFIP G I 359
Cdd:PTZ00219 329 eveysgqsvpvgglayy L SPP N S F SD ii N D P IHT I --- L YIV F V L F SCALF sk T W I EVS gss AKD VA KQL K D QG MGMV G Y 405
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1810227089 360 R PGKPTQEY L EK ils YI IFIGAT G LVIVAVIPFF -- F N G VF G A nvsfg GT S I IIV V GVV 416
Cdd:PTZ00219 406 R DSSSMVRV L NR --- YI PTAASF G GMCIGALTIL ad F L G AI G S ----- GT G I LLA V TII 456
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
